Multiple sequence alignment - TraesCS2B01G254800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G254800 chr2B 100.000 3060 0 0 1 3060 286506949 286510008 0.000000e+00 5651.0
1 TraesCS2B01G254800 chr2B 92.519 401 25 5 1 397 286586876 286587275 1.230000e-158 569.0
2 TraesCS2B01G254800 chr2B 88.249 434 44 7 1 432 340585455 340585883 2.100000e-141 512.0
3 TraesCS2B01G254800 chr2B 93.023 43 3 0 547 589 657268559 657268517 2.550000e-06 63.9
4 TraesCS2B01G254800 chr3B 92.004 2026 86 24 1079 3060 568394495 568396488 0.000000e+00 2774.0
5 TraesCS2B01G254800 chr3B 89.583 432 41 4 1 432 280518395 280517968 2.070000e-151 545.0
6 TraesCS2B01G254800 chr3B 92.877 365 26 0 700 1064 568394146 568394510 5.810000e-147 531.0
7 TraesCS2B01G254800 chr3B 88.966 290 25 6 2778 3060 51974795 51974506 4.850000e-93 351.0
8 TraesCS2B01G254800 chr3B 79.012 486 39 16 1264 1693 187810709 187810231 1.080000e-69 274.0
9 TraesCS2B01G254800 chr4A 94.233 1422 56 10 938 2338 32636322 32634906 0.000000e+00 2148.0
10 TraesCS2B01G254800 chr4A 97.059 612 13 3 2454 3060 32634912 32634301 0.000000e+00 1026.0
11 TraesCS2B01G254800 chr4A 93.519 324 18 3 551 872 32637506 32637184 2.130000e-131 479.0
12 TraesCS2B01G254800 chr4A 89.236 288 15 8 871 1146 32637117 32636834 2.260000e-91 346.0
13 TraesCS2B01G254800 chr5A 97.059 612 13 3 2454 3060 476093462 476094073 0.000000e+00 1026.0
14 TraesCS2B01G254800 chr5A 94.727 531 19 1 1817 2338 476092938 476093468 0.000000e+00 817.0
15 TraesCS2B01G254800 chr5A 87.931 290 28 6 2778 3060 517949922 517949633 4.890000e-88 335.0
16 TraesCS2B01G254800 chr5A 91.549 71 4 2 431 499 426086740 426086670 2.510000e-16 97.1
17 TraesCS2B01G254800 chr5A 100.000 37 0 0 2078 2114 665723486 665723450 5.470000e-08 69.4
18 TraesCS2B01G254800 chr7B 88.506 435 41 6 1 432 386212196 386212624 4.520000e-143 518.0
19 TraesCS2B01G254800 chr7B 87.065 201 21 3 2434 2629 71238163 71238363 3.970000e-54 222.0
20 TraesCS2B01G254800 chr7B 84.375 128 14 4 2623 2747 52564150 52564274 1.490000e-23 121.0
21 TraesCS2B01G254800 chr7B 89.412 85 6 3 2623 2704 33811512 33811596 1.500000e-18 104.0
22 TraesCS2B01G254800 chr6B 88.453 433 45 5 1 432 298973740 298974168 4.520000e-143 518.0
23 TraesCS2B01G254800 chr6B 87.816 435 42 11 1 430 384014151 384014579 1.640000e-137 499.0
24 TraesCS2B01G254800 chr6B 87.816 435 42 11 1 430 384028609 384028181 1.640000e-137 499.0
25 TraesCS2B01G254800 chr6B 90.476 84 5 3 2624 2704 691120559 691120476 1.160000e-19 108.0
26 TraesCS2B01G254800 chr6B 90.476 84 5 3 2624 2704 691124253 691124170 1.160000e-19 108.0
27 TraesCS2B01G254800 chr6B 87.273 55 6 1 535 589 708238832 708238779 9.160000e-06 62.1
28 TraesCS2B01G254800 chrUn 88.276 435 44 7 1 432 416409993 416409563 5.850000e-142 514.0
29 TraesCS2B01G254800 chrUn 93.617 47 3 0 543 589 409486385 409486339 1.520000e-08 71.3
30 TraesCS2B01G254800 chr4B 87.788 434 45 8 1 430 290396059 290396488 4.550000e-138 501.0
31 TraesCS2B01G254800 chr7A 89.310 290 24 4 2778 3060 462309853 462309564 1.040000e-94 357.0
32 TraesCS2B01G254800 chr7A 88.462 156 14 2 2478 2629 116745057 116745212 5.210000e-43 185.0
33 TraesCS2B01G254800 chr7A 88.889 81 4 4 431 508 69085234 69085312 9.030000e-16 95.3
34 TraesCS2B01G254800 chr7A 88.235 51 3 3 530 579 620404443 620404395 1.190000e-04 58.4
35 TraesCS2B01G254800 chr5B 89.310 290 24 6 2778 3060 269957749 269957460 1.040000e-94 357.0
36 TraesCS2B01G254800 chr5B 93.617 47 3 0 543 589 37693419 37693465 1.520000e-08 71.3
37 TraesCS2B01G254800 chr3A 89.310 290 24 4 2778 3060 54258489 54258200 1.040000e-94 357.0
38 TraesCS2B01G254800 chr3A 79.381 485 37 15 1264 1692 144163583 144163106 1.800000e-72 283.0
39 TraesCS2B01G254800 chr3A 95.312 64 2 1 429 491 541992804 541992867 1.940000e-17 100.0
40 TraesCS2B01G254800 chr3A 94.737 57 3 0 424 480 747520904 747520848 4.200000e-14 89.8
41 TraesCS2B01G254800 chr3A 93.220 59 2 1 432 488 597625221 597625163 5.440000e-13 86.1
42 TraesCS2B01G254800 chr1A 89.310 290 24 6 2778 3060 61110042 61110331 1.040000e-94 357.0
43 TraesCS2B01G254800 chr1A 98.039 51 1 0 430 480 436069211 436069261 4.200000e-14 89.8
44 TraesCS2B01G254800 chr1A 98.000 50 1 0 431 480 51260414 51260365 1.510000e-13 87.9
45 TraesCS2B01G254800 chr1A 95.455 44 0 2 539 582 550335268 550335227 5.470000e-08 69.4
46 TraesCS2B01G254800 chr3D 78.645 487 40 16 1264 1694 131358624 131358146 6.510000e-67 265.0
47 TraesCS2B01G254800 chr3D 92.941 85 3 2 2623 2704 68478168 68478084 1.490000e-23 121.0
48 TraesCS2B01G254800 chr3D 100.000 37 0 0 2078 2114 595725077 595725041 5.470000e-08 69.4
49 TraesCS2B01G254800 chr1B 81.223 229 35 4 2434 2655 681713667 681713440 8.720000e-41 178.0
50 TraesCS2B01G254800 chr2D 90.588 85 4 4 2623 2704 87407047 87406964 3.230000e-20 110.0
51 TraesCS2B01G254800 chr6A 93.651 63 2 2 430 490 590329367 590329429 3.250000e-15 93.5
52 TraesCS2B01G254800 chr6A 96.296 54 2 0 426 479 474883874 474883821 4.200000e-14 89.8
53 TraesCS2B01G254800 chr2A 91.489 47 0 3 536 580 6439106 6439150 9.160000e-06 62.1
54 TraesCS2B01G254800 chr2A 91.489 47 0 3 536 580 6499603 6499647 9.160000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G254800 chr2B 286506949 286510008 3059 False 5651.00 5651 100.00000 1 3060 1 chr2B.!!$F1 3059
1 TraesCS2B01G254800 chr3B 568394146 568396488 2342 False 1652.50 2774 92.44050 700 3060 2 chr3B.!!$F1 2360
2 TraesCS2B01G254800 chr4A 32634301 32637506 3205 True 999.75 2148 93.51175 551 3060 4 chr4A.!!$R1 2509
3 TraesCS2B01G254800 chr5A 476092938 476094073 1135 False 921.50 1026 95.89300 1817 3060 2 chr5A.!!$F1 1243

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
468 469 0.460987 GCACAGATTGAGTCTCCGGG 60.461 60.0 0.0 0.0 34.00 5.73 F
474 475 0.613777 ATTGAGTCTCCGGGTTCACC 59.386 55.0 0.0 0.0 0.00 4.02 F
1461 2274 0.600255 CCCTTGAGAACGTTGCGTCT 60.600 55.0 5.0 0.0 39.99 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1439 2252 0.878523 CGCAACGTTCTCAAGGGACA 60.879 55.000 0.00 0.0 0.00 4.02 R
1645 2458 0.885196 GCATCTAAAACCAACCCGCA 59.115 50.000 0.00 0.0 0.00 5.69 R
3011 3999 1.411612 CGGTATTTACCTTCCCGAGCT 59.588 52.381 5.29 0.0 44.25 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.648879 AAACACCACATGCAATTACTTAGT 57.351 33.333 0.00 0.00 0.00 2.24
24 25 6.648879 AACACCACATGCAATTACTTAGTT 57.351 33.333 0.00 0.00 0.00 2.24
25 26 6.648879 ACACCACATGCAATTACTTAGTTT 57.351 33.333 0.00 0.00 0.00 2.66
26 27 6.446318 ACACCACATGCAATTACTTAGTTTG 58.554 36.000 0.00 0.00 0.00 2.93
27 28 6.264292 ACACCACATGCAATTACTTAGTTTGA 59.736 34.615 0.00 0.00 0.00 2.69
28 29 7.039784 ACACCACATGCAATTACTTAGTTTGAT 60.040 33.333 0.00 0.00 0.00 2.57
29 30 7.485913 CACCACATGCAATTACTTAGTTTGATC 59.514 37.037 0.00 0.00 0.00 2.92
30 31 7.394359 ACCACATGCAATTACTTAGTTTGATCT 59.606 33.333 0.00 0.00 0.00 2.75
31 32 8.892723 CCACATGCAATTACTTAGTTTGATCTA 58.107 33.333 0.00 0.00 0.00 1.98
32 33 9.708222 CACATGCAATTACTTAGTTTGATCTAC 57.292 33.333 0.00 0.00 0.00 2.59
33 34 8.893727 ACATGCAATTACTTAGTTTGATCTACC 58.106 33.333 0.00 0.00 0.00 3.18
34 35 9.113838 CATGCAATTACTTAGTTTGATCTACCT 57.886 33.333 0.00 0.00 0.00 3.08
35 36 9.686683 ATGCAATTACTTAGTTTGATCTACCTT 57.313 29.630 0.00 0.00 0.00 3.50
43 44 8.476447 ACTTAGTTTGATCTACCTTAAGCTACC 58.524 37.037 0.00 0.00 0.00 3.18
44 45 6.236558 AGTTTGATCTACCTTAAGCTACCC 57.763 41.667 0.00 0.00 0.00 3.69
45 46 5.724854 AGTTTGATCTACCTTAAGCTACCCA 59.275 40.000 0.00 0.00 0.00 4.51
46 47 6.214819 AGTTTGATCTACCTTAAGCTACCCAA 59.785 38.462 0.00 0.00 0.00 4.12
47 48 5.609533 TGATCTACCTTAAGCTACCCAAC 57.390 43.478 0.00 0.00 0.00 3.77
48 49 5.027460 TGATCTACCTTAAGCTACCCAACA 58.973 41.667 0.00 0.00 0.00 3.33
49 50 5.486063 TGATCTACCTTAAGCTACCCAACAA 59.514 40.000 0.00 0.00 0.00 2.83
50 51 6.157994 TGATCTACCTTAAGCTACCCAACAAT 59.842 38.462 0.00 0.00 0.00 2.71
51 52 7.346175 TGATCTACCTTAAGCTACCCAACAATA 59.654 37.037 0.00 0.00 0.00 1.90
52 53 7.685849 TCTACCTTAAGCTACCCAACAATAT 57.314 36.000 0.00 0.00 0.00 1.28
53 54 8.097791 TCTACCTTAAGCTACCCAACAATATT 57.902 34.615 0.00 0.00 0.00 1.28
54 55 9.216148 TCTACCTTAAGCTACCCAACAATATTA 57.784 33.333 0.00 0.00 0.00 0.98
55 56 9.490379 CTACCTTAAGCTACCCAACAATATTAG 57.510 37.037 0.00 0.00 0.00 1.73
56 57 8.097791 ACCTTAAGCTACCCAACAATATTAGA 57.902 34.615 0.00 0.00 0.00 2.10
57 58 8.724310 ACCTTAAGCTACCCAACAATATTAGAT 58.276 33.333 0.00 0.00 0.00 1.98
58 59 9.003658 CCTTAAGCTACCCAACAATATTAGATG 57.996 37.037 0.00 0.00 0.00 2.90
59 60 9.561069 CTTAAGCTACCCAACAATATTAGATGT 57.439 33.333 0.00 0.00 0.00 3.06
60 61 9.914834 TTAAGCTACCCAACAATATTAGATGTT 57.085 29.630 0.00 0.00 40.24 2.71
78 79 4.582701 TGTTGTTAAACATGCCAAGAGG 57.417 40.909 0.00 0.00 41.41 3.69
79 80 3.957497 TGTTGTTAAACATGCCAAGAGGT 59.043 39.130 0.00 0.00 41.41 3.85
80 81 4.202101 TGTTGTTAAACATGCCAAGAGGTG 60.202 41.667 0.00 0.00 41.41 4.00
81 82 3.826524 TGTTAAACATGCCAAGAGGTGA 58.173 40.909 0.00 0.00 37.19 4.02
82 83 4.211125 TGTTAAACATGCCAAGAGGTGAA 58.789 39.130 0.00 0.00 37.19 3.18
83 84 4.646945 TGTTAAACATGCCAAGAGGTGAAA 59.353 37.500 0.00 0.00 37.19 2.69
84 85 3.733443 AAACATGCCAAGAGGTGAAAC 57.267 42.857 0.00 0.00 37.19 2.78
85 86 2.363306 ACATGCCAAGAGGTGAAACA 57.637 45.000 0.00 0.00 39.98 2.83
86 87 2.880443 ACATGCCAAGAGGTGAAACAT 58.120 42.857 0.00 0.00 39.98 2.71
87 88 4.032960 ACATGCCAAGAGGTGAAACATA 57.967 40.909 0.00 0.00 39.98 2.29
88 89 4.406456 ACATGCCAAGAGGTGAAACATAA 58.594 39.130 0.00 0.00 39.98 1.90
89 90 4.832266 ACATGCCAAGAGGTGAAACATAAA 59.168 37.500 0.00 0.00 39.98 1.40
90 91 5.481473 ACATGCCAAGAGGTGAAACATAAAT 59.519 36.000 0.00 0.00 39.98 1.40
91 92 6.663093 ACATGCCAAGAGGTGAAACATAAATA 59.337 34.615 0.00 0.00 39.98 1.40
92 93 7.178274 ACATGCCAAGAGGTGAAACATAAATAA 59.822 33.333 0.00 0.00 39.98 1.40
93 94 7.716799 TGCCAAGAGGTGAAACATAAATAAT 57.283 32.000 0.00 0.00 39.98 1.28
94 95 7.771183 TGCCAAGAGGTGAAACATAAATAATC 58.229 34.615 0.00 0.00 39.98 1.75
95 96 7.615365 TGCCAAGAGGTGAAACATAAATAATCT 59.385 33.333 0.00 0.00 39.98 2.40
96 97 9.120538 GCCAAGAGGTGAAACATAAATAATCTA 57.879 33.333 0.00 0.00 39.98 1.98
122 123 8.443953 CCTATCTAGGCAAATTTATATGAGGC 57.556 38.462 0.00 0.00 36.53 4.70
123 124 7.500559 CCTATCTAGGCAAATTTATATGAGGCC 59.499 40.741 0.00 0.00 40.18 5.19
124 125 5.245531 TCTAGGCAAATTTATATGAGGCCG 58.754 41.667 0.00 0.00 44.40 6.13
125 126 3.832527 AGGCAAATTTATATGAGGCCGT 58.167 40.909 0.00 0.00 44.40 5.68
126 127 4.980573 AGGCAAATTTATATGAGGCCGTA 58.019 39.130 0.00 0.00 44.40 4.02
127 128 5.381757 AGGCAAATTTATATGAGGCCGTAA 58.618 37.500 0.00 0.00 44.40 3.18
128 129 5.830991 AGGCAAATTTATATGAGGCCGTAAA 59.169 36.000 0.00 0.06 44.40 2.01
129 130 5.918576 GGCAAATTTATATGAGGCCGTAAAC 59.081 40.000 0.00 0.00 0.00 2.01
130 131 6.460399 GGCAAATTTATATGAGGCCGTAAACA 60.460 38.462 0.00 0.00 0.00 2.83
131 132 6.975772 GCAAATTTATATGAGGCCGTAAACAA 59.024 34.615 0.00 0.00 0.00 2.83
132 133 7.043656 GCAAATTTATATGAGGCCGTAAACAAC 60.044 37.037 0.00 0.00 0.00 3.32
133 134 7.633193 AATTTATATGAGGCCGTAAACAACA 57.367 32.000 0.00 0.00 0.00 3.33
134 135 7.633193 ATTTATATGAGGCCGTAAACAACAA 57.367 32.000 0.00 0.00 0.00 2.83
135 136 7.450124 TTTATATGAGGCCGTAAACAACAAA 57.550 32.000 0.00 0.00 0.00 2.83
136 137 3.636282 ATGAGGCCGTAAACAACAAAC 57.364 42.857 0.00 0.00 0.00 2.93
137 138 2.366533 TGAGGCCGTAAACAACAAACA 58.633 42.857 0.00 0.00 0.00 2.83
138 139 2.753452 TGAGGCCGTAAACAACAAACAA 59.247 40.909 0.00 0.00 0.00 2.83
139 140 3.110358 GAGGCCGTAAACAACAAACAAC 58.890 45.455 0.00 0.00 0.00 3.32
140 141 2.492484 AGGCCGTAAACAACAAACAACA 59.508 40.909 0.00 0.00 0.00 3.33
141 142 3.056749 AGGCCGTAAACAACAAACAACAA 60.057 39.130 0.00 0.00 0.00 2.83
142 143 3.866327 GGCCGTAAACAACAAACAACAAT 59.134 39.130 0.00 0.00 0.00 2.71
143 144 4.330347 GGCCGTAAACAACAAACAACAATT 59.670 37.500 0.00 0.00 0.00 2.32
144 145 5.485831 GCCGTAAACAACAAACAACAATTC 58.514 37.500 0.00 0.00 0.00 2.17
145 146 5.501092 GCCGTAAACAACAAACAACAATTCC 60.501 40.000 0.00 0.00 0.00 3.01
146 147 5.275974 CCGTAAACAACAAACAACAATTCCG 60.276 40.000 0.00 0.00 0.00 4.30
147 148 5.275974 CGTAAACAACAAACAACAATTCCGG 60.276 40.000 0.00 0.00 0.00 5.14
148 149 4.457834 AACAACAAACAACAATTCCGGA 57.542 36.364 0.00 0.00 0.00 5.14
149 150 4.457834 ACAACAAACAACAATTCCGGAA 57.542 36.364 21.37 21.37 0.00 4.30
150 151 4.822026 ACAACAAACAACAATTCCGGAAA 58.178 34.783 23.08 4.74 0.00 3.13
151 152 5.238583 ACAACAAACAACAATTCCGGAAAA 58.761 33.333 23.08 0.00 0.00 2.29
152 153 5.877564 ACAACAAACAACAATTCCGGAAAAT 59.122 32.000 23.08 10.70 0.00 1.82
153 154 6.036626 ACAACAAACAACAATTCCGGAAAATC 59.963 34.615 23.08 0.00 0.00 2.17
154 155 5.053811 ACAAACAACAATTCCGGAAAATCC 58.946 37.500 23.08 0.00 0.00 3.01
155 156 5.163353 ACAAACAACAATTCCGGAAAATCCT 60.163 36.000 23.08 0.05 33.30 3.24
156 157 4.783764 ACAACAATTCCGGAAAATCCTC 57.216 40.909 23.08 0.00 33.30 3.71
157 158 4.148838 ACAACAATTCCGGAAAATCCTCA 58.851 39.130 23.08 0.00 33.30 3.86
158 159 4.022329 ACAACAATTCCGGAAAATCCTCAC 60.022 41.667 23.08 0.00 33.30 3.51
159 160 3.761897 ACAATTCCGGAAAATCCTCACA 58.238 40.909 23.08 0.00 33.30 3.58
160 161 4.344104 ACAATTCCGGAAAATCCTCACAT 58.656 39.130 23.08 0.00 33.30 3.21
161 162 4.158394 ACAATTCCGGAAAATCCTCACATG 59.842 41.667 23.08 9.55 33.30 3.21
162 163 1.750193 TCCGGAAAATCCTCACATGC 58.250 50.000 0.00 0.00 33.30 4.06
163 164 1.004161 TCCGGAAAATCCTCACATGCA 59.996 47.619 0.00 0.00 33.30 3.96
164 165 1.818060 CCGGAAAATCCTCACATGCAA 59.182 47.619 0.00 0.00 33.30 4.08
165 166 2.428171 CCGGAAAATCCTCACATGCAAT 59.572 45.455 0.00 0.00 33.30 3.56
166 167 3.119029 CCGGAAAATCCTCACATGCAATT 60.119 43.478 0.00 0.00 33.30 2.32
167 168 4.497300 CGGAAAATCCTCACATGCAATTT 58.503 39.130 0.00 0.00 33.30 1.82
168 169 5.394005 CCGGAAAATCCTCACATGCAATTTA 60.394 40.000 0.00 0.00 33.30 1.40
169 170 6.275335 CGGAAAATCCTCACATGCAATTTAT 58.725 36.000 0.00 0.00 33.30 1.40
170 171 6.199531 CGGAAAATCCTCACATGCAATTTATG 59.800 38.462 0.00 0.00 33.30 1.90
171 172 7.267128 GGAAAATCCTCACATGCAATTTATGA 58.733 34.615 0.00 0.00 32.53 2.15
172 173 7.765360 GGAAAATCCTCACATGCAATTTATGAA 59.235 33.333 0.00 0.00 32.53 2.57
173 174 9.321562 GAAAATCCTCACATGCAATTTATGAAT 57.678 29.630 0.00 0.00 0.00 2.57
174 175 9.675464 AAAATCCTCACATGCAATTTATGAATT 57.325 25.926 0.00 0.00 35.90 2.17
175 176 9.675464 AAATCCTCACATGCAATTTATGAATTT 57.325 25.926 0.00 0.00 33.25 1.82
176 177 8.657074 ATCCTCACATGCAATTTATGAATTTG 57.343 30.769 0.00 0.00 33.25 2.32
177 178 6.535865 TCCTCACATGCAATTTATGAATTTGC 59.464 34.615 10.41 10.41 33.25 3.68
178 179 6.537301 CCTCACATGCAATTTATGAATTTGCT 59.463 34.615 15.72 3.99 33.25 3.91
179 180 7.707464 CCTCACATGCAATTTATGAATTTGCTA 59.293 33.333 15.72 6.79 33.25 3.49
180 181 8.410030 TCACATGCAATTTATGAATTTGCTAC 57.590 30.769 15.72 0.00 33.25 3.58
181 182 8.252417 TCACATGCAATTTATGAATTTGCTACT 58.748 29.630 15.72 3.46 33.25 2.57
182 183 8.325282 CACATGCAATTTATGAATTTGCTACTG 58.675 33.333 15.72 13.07 33.25 2.74
183 184 8.036575 ACATGCAATTTATGAATTTGCTACTGT 58.963 29.630 15.72 13.48 33.25 3.55
184 185 8.875803 CATGCAATTTATGAATTTGCTACTGTT 58.124 29.630 15.72 0.00 33.25 3.16
185 186 8.464770 TGCAATTTATGAATTTGCTACTGTTC 57.535 30.769 15.72 0.00 33.25 3.18
186 187 8.306038 TGCAATTTATGAATTTGCTACTGTTCT 58.694 29.630 15.72 0.00 33.25 3.01
187 188 8.589629 GCAATTTATGAATTTGCTACTGTTCTG 58.410 33.333 10.16 0.00 33.25 3.02
188 189 8.589629 CAATTTATGAATTTGCTACTGTTCTGC 58.410 33.333 0.00 0.00 33.25 4.26
189 190 4.708726 ATGAATTTGCTACTGTTCTGCC 57.291 40.909 0.00 0.00 0.00 4.85
190 191 2.819608 TGAATTTGCTACTGTTCTGCCC 59.180 45.455 0.00 0.00 0.00 5.36
191 192 2.887151 ATTTGCTACTGTTCTGCCCT 57.113 45.000 0.00 0.00 0.00 5.19
192 193 4.261801 GAATTTGCTACTGTTCTGCCCTA 58.738 43.478 0.00 0.00 0.00 3.53
193 194 4.510167 ATTTGCTACTGTTCTGCCCTAT 57.490 40.909 0.00 0.00 0.00 2.57
194 195 5.630415 ATTTGCTACTGTTCTGCCCTATA 57.370 39.130 0.00 0.00 0.00 1.31
195 196 4.402056 TTGCTACTGTTCTGCCCTATAC 57.598 45.455 0.00 0.00 0.00 1.47
196 197 3.371034 TGCTACTGTTCTGCCCTATACA 58.629 45.455 0.00 0.00 0.00 2.29
197 198 3.132289 TGCTACTGTTCTGCCCTATACAC 59.868 47.826 0.00 0.00 0.00 2.90
198 199 3.132289 GCTACTGTTCTGCCCTATACACA 59.868 47.826 0.00 0.00 0.00 3.72
199 200 4.382685 GCTACTGTTCTGCCCTATACACAA 60.383 45.833 0.00 0.00 0.00 3.33
200 201 4.844349 ACTGTTCTGCCCTATACACAAT 57.156 40.909 0.00 0.00 0.00 2.71
201 202 5.179452 ACTGTTCTGCCCTATACACAATT 57.821 39.130 0.00 0.00 0.00 2.32
202 203 5.570320 ACTGTTCTGCCCTATACACAATTT 58.430 37.500 0.00 0.00 0.00 1.82
203 204 6.010219 ACTGTTCTGCCCTATACACAATTTT 58.990 36.000 0.00 0.00 0.00 1.82
204 205 7.172342 ACTGTTCTGCCCTATACACAATTTTA 58.828 34.615 0.00 0.00 0.00 1.52
205 206 7.336931 ACTGTTCTGCCCTATACACAATTTTAG 59.663 37.037 0.00 0.00 0.00 1.85
206 207 7.398829 TGTTCTGCCCTATACACAATTTTAGA 58.601 34.615 0.00 0.00 0.00 2.10
207 208 8.052748 TGTTCTGCCCTATACACAATTTTAGAT 58.947 33.333 0.00 0.00 0.00 1.98
208 209 8.903820 GTTCTGCCCTATACACAATTTTAGATT 58.096 33.333 0.00 0.00 0.00 2.40
209 210 9.474313 TTCTGCCCTATACACAATTTTAGATTT 57.526 29.630 0.00 0.00 0.00 2.17
210 211 8.902806 TCTGCCCTATACACAATTTTAGATTTG 58.097 33.333 0.00 0.00 0.00 2.32
211 212 8.588290 TGCCCTATACACAATTTTAGATTTGT 57.412 30.769 0.00 0.00 36.53 2.83
212 213 9.030452 TGCCCTATACACAATTTTAGATTTGTT 57.970 29.630 0.00 0.00 33.93 2.83
232 233 9.988815 ATTTGTTAAACATGTAAAGTAATGCCA 57.011 25.926 0.00 0.00 0.00 4.92
233 234 8.804688 TTGTTAAACATGTAAAGTAATGCCAC 57.195 30.769 0.00 0.00 0.00 5.01
234 235 7.371936 TGTTAAACATGTAAAGTAATGCCACC 58.628 34.615 0.00 0.00 0.00 4.61
235 236 7.014326 TGTTAAACATGTAAAGTAATGCCACCA 59.986 33.333 0.00 0.00 0.00 4.17
236 237 6.603940 AAACATGTAAAGTAATGCCACCAT 57.396 33.333 0.00 0.00 0.00 3.55
237 238 5.581126 ACATGTAAAGTAATGCCACCATG 57.419 39.130 0.00 0.00 35.69 3.66
238 239 5.016173 ACATGTAAAGTAATGCCACCATGT 58.984 37.500 0.00 0.00 37.44 3.21
239 240 5.480073 ACATGTAAAGTAATGCCACCATGTT 59.520 36.000 0.00 0.00 38.70 2.71
240 241 6.661377 ACATGTAAAGTAATGCCACCATGTTA 59.339 34.615 0.00 0.00 38.70 2.41
241 242 7.177568 ACATGTAAAGTAATGCCACCATGTTAA 59.822 33.333 0.00 0.00 38.70 2.01
242 243 6.915349 TGTAAAGTAATGCCACCATGTTAAC 58.085 36.000 0.00 0.00 0.00 2.01
243 244 5.400066 AAAGTAATGCCACCATGTTAACC 57.600 39.130 2.48 0.00 0.00 2.85
244 245 4.316025 AGTAATGCCACCATGTTAACCT 57.684 40.909 2.48 0.00 0.00 3.50
245 246 5.444744 AGTAATGCCACCATGTTAACCTA 57.555 39.130 2.48 0.00 0.00 3.08
246 247 6.013554 AGTAATGCCACCATGTTAACCTAT 57.986 37.500 2.48 0.00 0.00 2.57
247 248 5.827797 AGTAATGCCACCATGTTAACCTATG 59.172 40.000 2.48 1.07 0.00 2.23
248 249 2.374184 TGCCACCATGTTAACCTATGC 58.626 47.619 2.48 0.00 0.00 3.14
249 250 2.291217 TGCCACCATGTTAACCTATGCA 60.291 45.455 2.48 0.00 0.00 3.96
250 251 2.958355 GCCACCATGTTAACCTATGCAT 59.042 45.455 3.79 3.79 0.00 3.96
251 252 3.384467 GCCACCATGTTAACCTATGCATT 59.616 43.478 3.54 0.00 0.00 3.56
252 253 4.141959 GCCACCATGTTAACCTATGCATTT 60.142 41.667 3.54 0.00 0.00 2.32
253 254 5.626578 GCCACCATGTTAACCTATGCATTTT 60.627 40.000 3.54 0.00 0.00 1.82
254 255 6.405538 CCACCATGTTAACCTATGCATTTTT 58.594 36.000 3.54 0.00 0.00 1.94
255 256 6.534793 CCACCATGTTAACCTATGCATTTTTC 59.465 38.462 3.54 0.00 0.00 2.29
256 257 7.322664 CACCATGTTAACCTATGCATTTTTCT 58.677 34.615 3.54 0.00 0.00 2.52
257 258 8.465999 CACCATGTTAACCTATGCATTTTTCTA 58.534 33.333 3.54 0.00 0.00 2.10
258 259 8.466798 ACCATGTTAACCTATGCATTTTTCTAC 58.533 33.333 3.54 0.00 0.00 2.59
259 260 7.920682 CCATGTTAACCTATGCATTTTTCTACC 59.079 37.037 3.54 0.00 0.00 3.18
260 261 7.399245 TGTTAACCTATGCATTTTTCTACCC 57.601 36.000 3.54 0.00 0.00 3.69
261 262 6.378848 TGTTAACCTATGCATTTTTCTACCCC 59.621 38.462 3.54 0.00 0.00 4.95
262 263 4.601406 ACCTATGCATTTTTCTACCCCA 57.399 40.909 3.54 0.00 0.00 4.96
263 264 5.142806 ACCTATGCATTTTTCTACCCCAT 57.857 39.130 3.54 0.00 0.00 4.00
264 265 5.528337 ACCTATGCATTTTTCTACCCCATT 58.472 37.500 3.54 0.00 0.00 3.16
265 266 5.963865 ACCTATGCATTTTTCTACCCCATTT 59.036 36.000 3.54 0.00 0.00 2.32
266 267 7.129425 ACCTATGCATTTTTCTACCCCATTTA 58.871 34.615 3.54 0.00 0.00 1.40
267 268 7.069455 ACCTATGCATTTTTCTACCCCATTTAC 59.931 37.037 3.54 0.00 0.00 2.01
268 269 6.865834 ATGCATTTTTCTACCCCATTTACA 57.134 33.333 0.00 0.00 0.00 2.41
269 270 6.865834 TGCATTTTTCTACCCCATTTACAT 57.134 33.333 0.00 0.00 0.00 2.29
270 271 7.962995 TGCATTTTTCTACCCCATTTACATA 57.037 32.000 0.00 0.00 0.00 2.29
271 272 8.546083 TGCATTTTTCTACCCCATTTACATAT 57.454 30.769 0.00 0.00 0.00 1.78
272 273 9.647918 TGCATTTTTCTACCCCATTTACATATA 57.352 29.630 0.00 0.00 0.00 0.86
306 307 9.880157 TTTAATTCAGAGCTACGGTTATTTAGT 57.120 29.630 0.00 0.00 0.00 2.24
307 308 9.880157 TTAATTCAGAGCTACGGTTATTTAGTT 57.120 29.630 0.00 0.00 0.00 2.24
310 311 8.867112 TTCAGAGCTACGGTTATTTAGTTATG 57.133 34.615 0.00 0.00 0.00 1.90
311 312 8.229253 TCAGAGCTACGGTTATTTAGTTATGA 57.771 34.615 0.00 0.00 28.13 2.15
312 313 8.689061 TCAGAGCTACGGTTATTTAGTTATGAA 58.311 33.333 0.00 0.00 27.85 2.57
313 314 9.309516 CAGAGCTACGGTTATTTAGTTATGAAA 57.690 33.333 0.00 0.00 0.00 2.69
334 335 9.787435 ATGAAATAAATCATTTTAGCATGGCAT 57.213 25.926 0.00 0.00 36.67 4.40
335 336 9.616156 TGAAATAAATCATTTTAGCATGGCATT 57.384 25.926 0.00 0.00 36.96 3.56
363 364 7.911362 GCAAAATAAATGCAAACAACATGTT 57.089 28.000 4.92 4.92 43.29 2.71
379 380 8.121167 ACAACATGTTTAAACATTTTACCACG 57.879 30.769 27.33 17.67 46.95 4.94
380 381 7.222999 ACAACATGTTTAAACATTTTACCACGG 59.777 33.333 27.33 17.11 46.95 4.94
381 382 7.040473 ACATGTTTAAACATTTTACCACGGA 57.960 32.000 27.33 0.21 46.95 4.69
382 383 7.662897 ACATGTTTAAACATTTTACCACGGAT 58.337 30.769 27.33 4.00 46.95 4.18
383 384 7.596995 ACATGTTTAAACATTTTACCACGGATG 59.403 33.333 27.33 16.68 46.95 3.51
384 385 7.273320 TGTTTAAACATTTTACCACGGATGA 57.727 32.000 17.01 0.00 33.17 2.92
385 386 7.713750 TGTTTAAACATTTTACCACGGATGAA 58.286 30.769 17.01 0.00 33.17 2.57
386 387 8.195436 TGTTTAAACATTTTACCACGGATGAAA 58.805 29.630 17.01 0.00 33.17 2.69
387 388 9.032420 GTTTAAACATTTTACCACGGATGAAAA 57.968 29.630 13.51 0.00 0.00 2.29
388 389 9.765795 TTTAAACATTTTACCACGGATGAAAAT 57.234 25.926 0.00 0.00 32.97 1.82
390 391 5.719173 ACATTTTACCACGGATGAAAATGG 58.281 37.500 23.56 7.54 46.39 3.16
391 392 3.859411 TTTACCACGGATGAAAATGGC 57.141 42.857 0.00 0.00 35.49 4.40
392 393 2.498644 TACCACGGATGAAAATGGCA 57.501 45.000 0.00 0.00 35.49 4.92
393 394 1.626686 ACCACGGATGAAAATGGCAA 58.373 45.000 0.00 0.00 35.49 4.52
394 395 1.967066 ACCACGGATGAAAATGGCAAA 59.033 42.857 0.00 0.00 35.49 3.68
395 396 2.566724 ACCACGGATGAAAATGGCAAAT 59.433 40.909 0.00 0.00 35.49 2.32
396 397 3.007831 ACCACGGATGAAAATGGCAAATT 59.992 39.130 0.00 0.00 35.49 1.82
397 398 4.221703 ACCACGGATGAAAATGGCAAATTA 59.778 37.500 0.00 0.00 35.49 1.40
398 399 5.104982 ACCACGGATGAAAATGGCAAATTAT 60.105 36.000 0.00 0.00 35.49 1.28
399 400 5.816777 CCACGGATGAAAATGGCAAATTATT 59.183 36.000 0.00 0.00 0.00 1.40
400 401 6.983307 CCACGGATGAAAATGGCAAATTATTA 59.017 34.615 0.00 0.00 0.00 0.98
401 402 7.493971 CCACGGATGAAAATGGCAAATTATTAA 59.506 33.333 0.00 0.00 0.00 1.40
402 403 9.044150 CACGGATGAAAATGGCAAATTATTAAT 57.956 29.630 0.00 0.00 0.00 1.40
403 404 9.260002 ACGGATGAAAATGGCAAATTATTAATC 57.740 29.630 0.00 0.00 0.00 1.75
404 405 9.480053 CGGATGAAAATGGCAAATTATTAATCT 57.520 29.630 0.00 0.00 0.00 2.40
427 428 9.893305 ATCTACACAAAATTGTAAGCAGTTTAC 57.107 29.630 0.00 0.28 39.91 2.01
439 440 8.079211 TGTAAGCAGTTTACATATCTCTTCCT 57.921 34.615 5.79 0.00 45.07 3.36
440 441 9.197306 TGTAAGCAGTTTACATATCTCTTCCTA 57.803 33.333 5.79 0.00 45.07 2.94
461 462 9.905713 TTCCTAATAATAAAGCACAGATTGAGT 57.094 29.630 0.00 0.00 0.00 3.41
462 463 9.547753 TCCTAATAATAAAGCACAGATTGAGTC 57.452 33.333 0.00 0.00 0.00 3.36
463 464 9.553064 CCTAATAATAAAGCACAGATTGAGTCT 57.447 33.333 0.00 0.00 37.80 3.24
465 466 8.443953 AATAATAAAGCACAGATTGAGTCTCC 57.556 34.615 0.00 0.00 34.00 3.71
466 467 2.376808 AAGCACAGATTGAGTCTCCG 57.623 50.000 0.00 0.00 34.00 4.63
467 468 0.534412 AGCACAGATTGAGTCTCCGG 59.466 55.000 0.00 0.00 34.00 5.14
468 469 0.460987 GCACAGATTGAGTCTCCGGG 60.461 60.000 0.00 0.00 34.00 5.73
469 470 0.898320 CACAGATTGAGTCTCCGGGT 59.102 55.000 0.00 0.00 34.00 5.28
470 471 1.276421 CACAGATTGAGTCTCCGGGTT 59.724 52.381 0.00 0.00 34.00 4.11
471 472 1.550976 ACAGATTGAGTCTCCGGGTTC 59.449 52.381 0.00 0.00 34.00 3.62
472 473 1.550524 CAGATTGAGTCTCCGGGTTCA 59.449 52.381 0.00 0.00 34.00 3.18
473 474 1.550976 AGATTGAGTCTCCGGGTTCAC 59.449 52.381 0.00 0.00 28.45 3.18
474 475 0.613777 ATTGAGTCTCCGGGTTCACC 59.386 55.000 0.00 0.00 0.00 4.02
484 485 3.644861 GGGTTCACCGTCATCCTTT 57.355 52.632 0.00 0.00 36.71 3.11
485 486 1.905637 GGGTTCACCGTCATCCTTTT 58.094 50.000 0.00 0.00 36.71 2.27
486 487 2.235891 GGGTTCACCGTCATCCTTTTT 58.764 47.619 0.00 0.00 36.71 1.94
533 534 9.734620 TTTTTAGACAAACTCATCAATCTGTTG 57.265 29.630 0.00 0.00 36.65 3.33
534 535 8.450578 TTTAGACAAACTCATCAATCTGTTGT 57.549 30.769 0.00 0.00 36.69 3.32
535 536 6.949352 AGACAAACTCATCAATCTGTTGTT 57.051 33.333 0.00 0.00 36.69 2.83
536 537 7.338800 AGACAAACTCATCAATCTGTTGTTT 57.661 32.000 0.00 0.00 36.69 2.83
537 538 7.198390 AGACAAACTCATCAATCTGTTGTTTG 58.802 34.615 12.24 12.24 41.47 2.93
538 539 6.866480 ACAAACTCATCAATCTGTTGTTTGT 58.134 32.000 13.31 13.31 42.44 2.83
539 540 6.753279 ACAAACTCATCAATCTGTTGTTTGTG 59.247 34.615 16.85 0.00 43.68 3.33
540 541 6.455360 AACTCATCAATCTGTTGTTTGTGT 57.545 33.333 0.00 0.00 36.69 3.72
541 542 6.455360 ACTCATCAATCTGTTGTTTGTGTT 57.545 33.333 0.00 0.00 36.69 3.32
542 543 6.866480 ACTCATCAATCTGTTGTTTGTGTTT 58.134 32.000 0.00 0.00 36.69 2.83
543 544 7.995289 ACTCATCAATCTGTTGTTTGTGTTTA 58.005 30.769 0.00 0.00 36.69 2.01
544 545 8.632679 ACTCATCAATCTGTTGTTTGTGTTTAT 58.367 29.630 0.00 0.00 36.69 1.40
545 546 9.467258 CTCATCAATCTGTTGTTTGTGTTTATT 57.533 29.630 0.00 0.00 36.69 1.40
638 640 5.301835 AGTATGCCTATTCAGAAGTGCAT 57.698 39.130 16.62 16.62 41.79 3.96
770 774 4.092968 GCTCCGATTCAAATTAGTTGTCGT 59.907 41.667 5.12 0.00 35.18 4.34
778 782 7.962934 TTCAAATTAGTTGTCGTTCAAACTG 57.037 32.000 0.00 0.00 38.47 3.16
785 789 6.963049 AGTTGTCGTTCAAACTGATATACC 57.037 37.500 0.00 0.00 37.81 2.73
946 1018 4.503007 CGTCCCACTCTAATAACATGAACG 59.497 45.833 0.00 0.00 0.00 3.95
964 1036 1.535462 ACGAAATGACCGAAAAGGCTG 59.465 47.619 0.00 0.00 46.52 4.85
1003 1087 6.959639 AAAAGAATAAGAAAGTGGACAGCA 57.040 33.333 0.00 0.00 0.00 4.41
1017 1101 0.669318 ACAGCACCGGACGTTGTATG 60.669 55.000 9.46 1.98 0.00 2.39
1092 1899 9.599866 TTTGTGAGAATATGTACTGTATTCCTG 57.400 33.333 19.25 0.00 38.65 3.86
1410 2223 3.098555 GGCAACGCCGGATACAAG 58.901 61.111 5.05 0.00 39.62 3.16
1439 2252 2.965999 GCTCATCGATGCGCTGCT 60.966 61.111 28.40 0.00 35.74 4.24
1446 2259 2.437359 GATGCGCTGCTGTCCCTT 60.437 61.111 9.73 0.00 0.00 3.95
1461 2274 0.600255 CCCTTGAGAACGTTGCGTCT 60.600 55.000 5.00 0.00 39.99 4.18
1522 2335 2.592861 GCGGGATCCATGCTCACC 60.593 66.667 15.23 0.00 0.00 4.02
1526 2339 1.592669 GGATCCATGCTCACCGACG 60.593 63.158 6.95 0.00 0.00 5.12
1537 2350 3.371063 ACCGACGTGCTCACCGAT 61.371 61.111 0.00 0.00 0.00 4.18
1645 2458 1.045407 ACACGGTACACACTCACCAT 58.955 50.000 0.00 0.00 34.25 3.55
1858 2682 8.667076 TGAATCTCATGGTGTATTCTTACATG 57.333 34.615 0.00 0.00 40.35 3.21
1966 2790 3.494048 CCAGTACTCTGATCCTTGCATCC 60.494 52.174 0.00 0.00 43.76 3.51
2065 2889 8.906867 ACTGCACATACAGCTAATAAAATCAAT 58.093 29.630 0.00 0.00 41.60 2.57
2291 3118 5.221966 TGCTAAAGTAGTTGAGGGGCTAAAA 60.222 40.000 0.00 0.00 0.00 1.52
2296 3123 4.536489 AGTAGTTGAGGGGCTAAAACTCAT 59.464 41.667 0.00 0.00 40.56 2.90
2332 3312 5.773680 TGGATAAACAATTCCCACGGTTTAA 59.226 36.000 0.00 0.00 38.67 1.52
2333 3313 6.094719 GGATAAACAATTCCCACGGTTTAAC 58.905 40.000 0.00 0.00 38.67 2.01
2334 3314 6.071784 GGATAAACAATTCCCACGGTTTAACT 60.072 38.462 0.00 0.00 38.67 2.24
2335 3315 5.601583 AAACAATTCCCACGGTTTAACTT 57.398 34.783 0.00 0.00 32.15 2.66
2336 3316 6.712179 AAACAATTCCCACGGTTTAACTTA 57.288 33.333 0.00 0.00 32.15 2.24
2337 3317 5.694231 ACAATTCCCACGGTTTAACTTAC 57.306 39.130 0.00 0.00 0.00 2.34
2338 3318 4.520111 ACAATTCCCACGGTTTAACTTACC 59.480 41.667 0.00 0.00 0.00 2.85
2339 3319 4.645863 ATTCCCACGGTTTAACTTACCT 57.354 40.909 0.00 0.00 33.35 3.08
2340 3320 5.760484 ATTCCCACGGTTTAACTTACCTA 57.240 39.130 0.00 0.00 33.35 3.08
2341 3321 5.760484 TTCCCACGGTTTAACTTACCTAT 57.240 39.130 0.00 0.00 33.35 2.57
2342 3322 6.865834 TTCCCACGGTTTAACTTACCTATA 57.134 37.500 0.00 0.00 33.35 1.31
2343 3323 6.220726 TCCCACGGTTTAACTTACCTATAC 57.779 41.667 0.00 0.00 33.35 1.47
2344 3324 5.719085 TCCCACGGTTTAACTTACCTATACA 59.281 40.000 0.00 0.00 33.35 2.29
2345 3325 6.383726 TCCCACGGTTTAACTTACCTATACAT 59.616 38.462 0.00 0.00 33.35 2.29
2346 3326 6.703165 CCCACGGTTTAACTTACCTATACATC 59.297 42.308 0.00 0.00 33.35 3.06
2347 3327 7.418254 CCCACGGTTTAACTTACCTATACATCT 60.418 40.741 0.00 0.00 33.35 2.90
2348 3328 7.983484 CCACGGTTTAACTTACCTATACATCTT 59.017 37.037 0.00 0.00 33.35 2.40
2349 3329 8.814235 CACGGTTTAACTTACCTATACATCTTG 58.186 37.037 0.00 0.00 33.35 3.02
2350 3330 8.752187 ACGGTTTAACTTACCTATACATCTTGA 58.248 33.333 0.00 0.00 33.35 3.02
2351 3331 9.590451 CGGTTTAACTTACCTATACATCTTGAA 57.410 33.333 0.00 0.00 33.35 2.69
2392 3372 8.938883 ACTCAGGAATGTATATGTTATTGGACT 58.061 33.333 0.00 0.00 0.00 3.85
2395 3375 9.436957 CAGGAATGTATATGTTATTGGACTACC 57.563 37.037 0.00 0.00 0.00 3.18
2396 3376 9.166222 AGGAATGTATATGTTATTGGACTACCA 57.834 33.333 0.00 0.00 45.34 3.25
2407 3387 3.537795 TGGACTACCAACTCTACCAGT 57.462 47.619 0.00 0.00 43.91 4.00
2409 3389 3.830755 TGGACTACCAACTCTACCAGTTC 59.169 47.826 0.00 0.00 44.14 3.01
2410 3390 4.087907 GGACTACCAACTCTACCAGTTCT 58.912 47.826 0.00 0.00 44.14 3.01
2411 3391 4.082136 GGACTACCAACTCTACCAGTTCTG 60.082 50.000 0.00 0.00 44.14 3.02
2412 3392 3.833070 ACTACCAACTCTACCAGTTCTGG 59.167 47.826 16.25 16.25 44.14 3.86
2413 3393 2.972348 ACCAACTCTACCAGTTCTGGA 58.028 47.619 23.45 8.01 44.14 3.86
2414 3394 3.521727 ACCAACTCTACCAGTTCTGGAT 58.478 45.455 23.45 11.29 44.14 3.41
2415 3395 3.910627 ACCAACTCTACCAGTTCTGGATT 59.089 43.478 23.45 6.54 44.14 3.01
2416 3396 5.091552 ACCAACTCTACCAGTTCTGGATTA 58.908 41.667 23.45 7.30 44.14 1.75
2417 3397 5.546499 ACCAACTCTACCAGTTCTGGATTAA 59.454 40.000 23.45 6.78 44.14 1.40
2418 3398 6.109359 CCAACTCTACCAGTTCTGGATTAAG 58.891 44.000 23.45 15.95 44.14 1.85
2419 3399 6.070767 CCAACTCTACCAGTTCTGGATTAAGA 60.071 42.308 23.45 17.03 44.14 2.10
2420 3400 7.365117 CCAACTCTACCAGTTCTGGATTAAGAT 60.365 40.741 23.45 8.42 44.14 2.40
2421 3401 7.118496 ACTCTACCAGTTCTGGATTAAGATG 57.882 40.000 23.45 14.42 26.56 2.90
2422 3402 6.897966 ACTCTACCAGTTCTGGATTAAGATGA 59.102 38.462 23.45 9.16 26.56 2.92
2423 3403 7.566879 ACTCTACCAGTTCTGGATTAAGATGAT 59.433 37.037 23.45 1.86 26.56 2.45
2424 3404 8.324191 TCTACCAGTTCTGGATTAAGATGATT 57.676 34.615 23.45 1.39 0.00 2.57
2425 3405 8.206867 TCTACCAGTTCTGGATTAAGATGATTG 58.793 37.037 23.45 1.03 0.00 2.67
2426 3406 6.962182 ACCAGTTCTGGATTAAGATGATTGA 58.038 36.000 23.45 0.00 0.00 2.57
2427 3407 7.405292 ACCAGTTCTGGATTAAGATGATTGAA 58.595 34.615 23.45 0.00 0.00 2.69
2428 3408 7.555554 ACCAGTTCTGGATTAAGATGATTGAAG 59.444 37.037 23.45 0.00 0.00 3.02
2429 3409 7.416022 CAGTTCTGGATTAAGATGATTGAAGC 58.584 38.462 0.00 0.00 0.00 3.86
2430 3410 7.282675 CAGTTCTGGATTAAGATGATTGAAGCT 59.717 37.037 0.00 0.00 0.00 3.74
2431 3411 8.489489 AGTTCTGGATTAAGATGATTGAAGCTA 58.511 33.333 0.00 0.00 0.00 3.32
2432 3412 9.113838 GTTCTGGATTAAGATGATTGAAGCTAA 57.886 33.333 0.00 0.00 0.00 3.09
2433 3413 9.685276 TTCTGGATTAAGATGATTGAAGCTAAA 57.315 29.630 0.00 0.00 0.00 1.85
2434 3414 9.334947 TCTGGATTAAGATGATTGAAGCTAAAG 57.665 33.333 0.00 0.00 0.00 1.85
2435 3415 9.118300 CTGGATTAAGATGATTGAAGCTAAAGT 57.882 33.333 0.00 0.00 0.00 2.66
2443 3423 9.593134 AGATGATTGAAGCTAAAGTAGTAGTTG 57.407 33.333 0.00 0.00 0.00 3.16
2444 3424 9.372369 GATGATTGAAGCTAAAGTAGTAGTTGT 57.628 33.333 0.00 0.00 0.00 3.32
2445 3425 8.534333 TGATTGAAGCTAAAGTAGTAGTTGTG 57.466 34.615 0.00 0.00 0.00 3.33
2446 3426 6.780706 TTGAAGCTAAAGTAGTAGTTGTGC 57.219 37.500 0.00 6.96 0.00 4.57
2447 3427 5.235516 TGAAGCTAAAGTAGTAGTTGTGCC 58.764 41.667 10.01 0.87 0.00 5.01
2448 3428 4.884668 AGCTAAAGTAGTAGTTGTGCCA 57.115 40.909 10.01 0.00 0.00 4.92
2449 3429 4.566987 AGCTAAAGTAGTAGTTGTGCCAC 58.433 43.478 10.01 0.00 0.00 5.01
2450 3430 4.283722 AGCTAAAGTAGTAGTTGTGCCACT 59.716 41.667 0.00 0.00 0.00 4.00
2451 3431 4.389077 GCTAAAGTAGTAGTTGTGCCACTG 59.611 45.833 0.00 0.00 0.00 3.66
2452 3432 4.682778 AAAGTAGTAGTTGTGCCACTGA 57.317 40.909 0.00 0.00 0.00 3.41
2453 3433 4.682778 AAGTAGTAGTTGTGCCACTGAA 57.317 40.909 0.00 0.00 0.00 3.02
2575 3555 4.215399 ACACGCACATAGCAATTAAAGTGT 59.785 37.500 0.00 0.00 46.13 3.55
2576 3556 4.554586 CACGCACATAGCAATTAAAGTGTG 59.445 41.667 0.00 0.00 46.13 3.82
2579 3559 5.059587 CGCACATAGCAATTAAAGTGTGTTG 59.940 40.000 12.08 0.00 46.13 3.33
2621 3605 3.809279 CACACTGCTCACTTGTGATGTTA 59.191 43.478 3.79 0.00 42.77 2.41
2768 3752 8.178313 TCCTCTTTGATGCTTATATAGTTCGA 57.822 34.615 0.00 0.00 0.00 3.71
2872 3860 1.145819 GCACCTGCCTCATCTCTCC 59.854 63.158 0.00 0.00 34.31 3.71
2877 3865 2.579860 ACCTGCCTCATCTCTCCAAAAT 59.420 45.455 0.00 0.00 0.00 1.82
2974 3962 2.252714 GTCTCTCTTGACACTCCCCTT 58.747 52.381 0.00 0.00 36.97 3.95
3011 3999 4.558226 AGCTGACCATGTGAGAATACAA 57.442 40.909 0.00 0.00 33.69 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.648879 ACTAAGTAATTGCATGTGGTGTTT 57.351 33.333 0.00 0.00 0.00 2.83
1 2 6.648879 AACTAAGTAATTGCATGTGGTGTT 57.351 33.333 0.00 0.00 0.00 3.32
2 3 6.264292 TCAAACTAAGTAATTGCATGTGGTGT 59.736 34.615 0.00 0.00 0.00 4.16
3 4 6.676950 TCAAACTAAGTAATTGCATGTGGTG 58.323 36.000 0.00 0.00 0.00 4.17
4 5 6.892658 TCAAACTAAGTAATTGCATGTGGT 57.107 33.333 0.00 0.00 0.00 4.16
5 6 7.765307 AGATCAAACTAAGTAATTGCATGTGG 58.235 34.615 0.00 0.00 0.00 4.17
6 7 9.708222 GTAGATCAAACTAAGTAATTGCATGTG 57.292 33.333 0.00 0.00 0.00 3.21
7 8 8.893727 GGTAGATCAAACTAAGTAATTGCATGT 58.106 33.333 0.00 0.00 0.00 3.21
8 9 9.113838 AGGTAGATCAAACTAAGTAATTGCATG 57.886 33.333 0.00 0.00 0.00 4.06
9 10 9.686683 AAGGTAGATCAAACTAAGTAATTGCAT 57.313 29.630 0.00 0.00 0.00 3.96
17 18 8.476447 GGTAGCTTAAGGTAGATCAAACTAAGT 58.524 37.037 14.53 0.00 0.00 2.24
18 19 7.927092 GGGTAGCTTAAGGTAGATCAAACTAAG 59.073 40.741 14.53 0.13 0.00 2.18
19 20 7.400915 TGGGTAGCTTAAGGTAGATCAAACTAA 59.599 37.037 14.53 0.00 0.00 2.24
20 21 6.899075 TGGGTAGCTTAAGGTAGATCAAACTA 59.101 38.462 14.53 0.00 0.00 2.24
21 22 5.724854 TGGGTAGCTTAAGGTAGATCAAACT 59.275 40.000 14.53 0.00 0.00 2.66
22 23 5.985911 TGGGTAGCTTAAGGTAGATCAAAC 58.014 41.667 14.53 4.00 0.00 2.93
23 24 6.013206 TGTTGGGTAGCTTAAGGTAGATCAAA 60.013 38.462 14.53 5.28 0.00 2.69
24 25 5.486063 TGTTGGGTAGCTTAAGGTAGATCAA 59.514 40.000 14.53 14.68 0.00 2.57
25 26 5.027460 TGTTGGGTAGCTTAAGGTAGATCA 58.973 41.667 14.53 10.18 0.00 2.92
26 27 5.609533 TGTTGGGTAGCTTAAGGTAGATC 57.390 43.478 14.53 7.96 0.00 2.75
27 28 6.576778 ATTGTTGGGTAGCTTAAGGTAGAT 57.423 37.500 14.53 0.00 0.00 1.98
28 29 7.685849 ATATTGTTGGGTAGCTTAAGGTAGA 57.314 36.000 14.53 0.00 0.00 2.59
29 30 9.490379 CTAATATTGTTGGGTAGCTTAAGGTAG 57.510 37.037 14.53 0.00 0.00 3.18
30 31 9.216148 TCTAATATTGTTGGGTAGCTTAAGGTA 57.784 33.333 10.31 10.31 0.00 3.08
31 32 8.097791 TCTAATATTGTTGGGTAGCTTAAGGT 57.902 34.615 12.54 12.54 0.00 3.50
32 33 9.003658 CATCTAATATTGTTGGGTAGCTTAAGG 57.996 37.037 4.29 0.00 0.00 2.69
33 34 9.561069 ACATCTAATATTGTTGGGTAGCTTAAG 57.439 33.333 0.00 0.00 0.00 1.85
34 35 9.914834 AACATCTAATATTGTTGGGTAGCTTAA 57.085 29.630 0.00 0.00 34.87 1.85
35 36 9.337396 CAACATCTAATATTGTTGGGTAGCTTA 57.663 33.333 9.28 0.00 45.63 3.09
36 37 8.225603 CAACATCTAATATTGTTGGGTAGCTT 57.774 34.615 9.28 0.00 45.63 3.74
37 38 7.807977 CAACATCTAATATTGTTGGGTAGCT 57.192 36.000 9.28 0.00 45.63 3.32
53 54 8.178610 ACCTCTTGGCATGTTTAACAACATCTA 61.179 37.037 0.66 0.00 42.36 1.98
54 55 7.421263 ACCTCTTGGCATGTTTAACAACATCT 61.421 38.462 0.66 0.00 42.36 2.90
55 56 5.278957 ACCTCTTGGCATGTTTAACAACATC 60.279 40.000 0.66 0.00 42.36 3.06
56 57 4.588528 ACCTCTTGGCATGTTTAACAACAT 59.411 37.500 0.66 0.00 44.22 2.71
57 58 3.957497 ACCTCTTGGCATGTTTAACAACA 59.043 39.130 0.66 0.00 41.33 3.33
58 59 4.037446 TCACCTCTTGGCATGTTTAACAAC 59.963 41.667 0.66 0.00 36.63 3.32
59 60 4.211125 TCACCTCTTGGCATGTTTAACAA 58.789 39.130 0.66 0.00 36.63 2.83
60 61 3.826524 TCACCTCTTGGCATGTTTAACA 58.173 40.909 0.00 0.00 36.63 2.41
61 62 4.846779 TTCACCTCTTGGCATGTTTAAC 57.153 40.909 0.00 0.00 36.63 2.01
62 63 4.646945 TGTTTCACCTCTTGGCATGTTTAA 59.353 37.500 0.00 0.00 36.63 1.52
63 64 4.211125 TGTTTCACCTCTTGGCATGTTTA 58.789 39.130 0.00 0.00 36.63 2.01
64 65 3.030291 TGTTTCACCTCTTGGCATGTTT 58.970 40.909 0.00 0.00 36.63 2.83
65 66 2.665165 TGTTTCACCTCTTGGCATGTT 58.335 42.857 0.00 0.00 36.63 2.71
66 67 2.363306 TGTTTCACCTCTTGGCATGT 57.637 45.000 0.00 0.00 36.63 3.21
67 68 5.389859 TTTATGTTTCACCTCTTGGCATG 57.610 39.130 0.00 0.00 36.63 4.06
68 69 7.716799 TTATTTATGTTTCACCTCTTGGCAT 57.283 32.000 0.00 0.00 36.63 4.40
69 70 7.615365 AGATTATTTATGTTTCACCTCTTGGCA 59.385 33.333 0.00 0.00 36.63 4.92
70 71 8.000780 AGATTATTTATGTTTCACCTCTTGGC 57.999 34.615 0.00 0.00 36.63 4.52
96 97 8.049721 GCCTCATATAAATTTGCCTAGATAGGT 58.950 37.037 7.71 0.00 45.42 3.08
97 98 7.500559 GGCCTCATATAAATTTGCCTAGATAGG 59.499 40.741 0.00 1.23 46.42 2.57
98 99 7.225538 CGGCCTCATATAAATTTGCCTAGATAG 59.774 40.741 0.00 0.00 35.28 2.08
99 100 7.047891 CGGCCTCATATAAATTTGCCTAGATA 58.952 38.462 0.00 0.00 35.28 1.98
100 101 5.882557 CGGCCTCATATAAATTTGCCTAGAT 59.117 40.000 0.00 0.00 35.28 1.98
101 102 5.221843 ACGGCCTCATATAAATTTGCCTAGA 60.222 40.000 0.00 0.00 35.28 2.43
102 103 5.003804 ACGGCCTCATATAAATTTGCCTAG 58.996 41.667 0.00 1.09 35.28 3.02
103 104 4.980573 ACGGCCTCATATAAATTTGCCTA 58.019 39.130 0.00 0.00 35.28 3.93
104 105 3.832527 ACGGCCTCATATAAATTTGCCT 58.167 40.909 0.00 0.00 35.28 4.75
105 106 5.699097 TTACGGCCTCATATAAATTTGCC 57.301 39.130 0.00 2.13 0.00 4.52
106 107 6.500041 TGTTTACGGCCTCATATAAATTTGC 58.500 36.000 0.00 0.00 0.00 3.68
107 108 7.971168 TGTTGTTTACGGCCTCATATAAATTTG 59.029 33.333 0.00 0.00 0.00 2.32
108 109 8.057536 TGTTGTTTACGGCCTCATATAAATTT 57.942 30.769 0.00 0.00 0.00 1.82
109 110 7.633193 TGTTGTTTACGGCCTCATATAAATT 57.367 32.000 0.00 0.00 0.00 1.82
110 111 7.633193 TTGTTGTTTACGGCCTCATATAAAT 57.367 32.000 0.00 0.00 0.00 1.40
111 112 7.040617 TGTTTGTTGTTTACGGCCTCATATAAA 60.041 33.333 0.00 0.00 0.00 1.40
112 113 6.430308 TGTTTGTTGTTTACGGCCTCATATAA 59.570 34.615 0.00 0.00 0.00 0.98
113 114 5.938710 TGTTTGTTGTTTACGGCCTCATATA 59.061 36.000 0.00 0.00 0.00 0.86
114 115 4.762765 TGTTTGTTGTTTACGGCCTCATAT 59.237 37.500 0.00 0.00 0.00 1.78
115 116 4.135306 TGTTTGTTGTTTACGGCCTCATA 58.865 39.130 0.00 0.00 0.00 2.15
116 117 2.952978 TGTTTGTTGTTTACGGCCTCAT 59.047 40.909 0.00 0.00 0.00 2.90
117 118 2.366533 TGTTTGTTGTTTACGGCCTCA 58.633 42.857 0.00 0.00 0.00 3.86
118 119 3.110358 GTTGTTTGTTGTTTACGGCCTC 58.890 45.455 0.00 0.00 0.00 4.70
119 120 2.492484 TGTTGTTTGTTGTTTACGGCCT 59.508 40.909 0.00 0.00 0.00 5.19
120 121 2.877335 TGTTGTTTGTTGTTTACGGCC 58.123 42.857 0.00 0.00 0.00 6.13
121 122 5.457650 AATTGTTGTTTGTTGTTTACGGC 57.542 34.783 0.00 0.00 0.00 5.68
122 123 5.275974 CGGAATTGTTGTTTGTTGTTTACGG 60.276 40.000 0.00 0.00 0.00 4.02
123 124 5.275974 CCGGAATTGTTGTTTGTTGTTTACG 60.276 40.000 0.00 0.00 0.00 3.18
124 125 5.805994 TCCGGAATTGTTGTTTGTTGTTTAC 59.194 36.000 0.00 0.00 0.00 2.01
125 126 5.962433 TCCGGAATTGTTGTTTGTTGTTTA 58.038 33.333 0.00 0.00 0.00 2.01
126 127 4.822026 TCCGGAATTGTTGTTTGTTGTTT 58.178 34.783 0.00 0.00 0.00 2.83
127 128 4.457834 TCCGGAATTGTTGTTTGTTGTT 57.542 36.364 0.00 0.00 0.00 2.83
128 129 4.457834 TTCCGGAATTGTTGTTTGTTGT 57.542 36.364 14.35 0.00 0.00 3.32
129 130 5.786401 TTTTCCGGAATTGTTGTTTGTTG 57.214 34.783 19.62 0.00 0.00 3.33
130 131 5.525745 GGATTTTCCGGAATTGTTGTTTGTT 59.474 36.000 19.62 0.00 0.00 2.83
131 132 5.053811 GGATTTTCCGGAATTGTTGTTTGT 58.946 37.500 19.62 0.00 0.00 2.83
132 133 5.296748 AGGATTTTCCGGAATTGTTGTTTG 58.703 37.500 19.62 0.00 42.75 2.93
133 134 5.069781 TGAGGATTTTCCGGAATTGTTGTTT 59.930 36.000 19.62 0.00 42.75 2.83
134 135 4.586841 TGAGGATTTTCCGGAATTGTTGTT 59.413 37.500 19.62 0.66 42.75 2.83
135 136 4.022329 GTGAGGATTTTCCGGAATTGTTGT 60.022 41.667 19.62 1.15 42.75 3.32
136 137 4.022416 TGTGAGGATTTTCCGGAATTGTTG 60.022 41.667 19.62 0.00 42.75 3.33
137 138 4.148838 TGTGAGGATTTTCCGGAATTGTT 58.851 39.130 19.62 2.91 42.75 2.83
138 139 3.761897 TGTGAGGATTTTCCGGAATTGT 58.238 40.909 19.62 6.97 42.75 2.71
139 140 4.675510 CATGTGAGGATTTTCCGGAATTG 58.324 43.478 19.62 0.00 42.75 2.32
140 141 3.131046 GCATGTGAGGATTTTCCGGAATT 59.869 43.478 19.62 8.93 42.75 2.17
141 142 2.689983 GCATGTGAGGATTTTCCGGAAT 59.310 45.455 19.62 3.25 42.75 3.01
142 143 2.091541 GCATGTGAGGATTTTCCGGAA 58.908 47.619 14.35 14.35 42.75 4.30
143 144 1.004161 TGCATGTGAGGATTTTCCGGA 59.996 47.619 0.00 0.00 42.75 5.14
144 145 1.462616 TGCATGTGAGGATTTTCCGG 58.537 50.000 0.00 0.00 42.75 5.14
145 146 3.788333 ATTGCATGTGAGGATTTTCCG 57.212 42.857 0.00 0.00 42.75 4.30
146 147 7.267128 TCATAAATTGCATGTGAGGATTTTCC 58.733 34.615 0.00 0.00 36.58 3.13
147 148 8.706492 TTCATAAATTGCATGTGAGGATTTTC 57.294 30.769 0.00 0.00 0.00 2.29
148 149 9.675464 AATTCATAAATTGCATGTGAGGATTTT 57.325 25.926 0.00 0.00 33.78 1.82
149 150 9.675464 AAATTCATAAATTGCATGTGAGGATTT 57.325 25.926 0.00 0.00 35.27 2.17
150 151 9.104965 CAAATTCATAAATTGCATGTGAGGATT 57.895 29.630 0.00 0.00 35.27 3.01
151 152 7.225931 GCAAATTCATAAATTGCATGTGAGGAT 59.774 33.333 7.39 0.00 35.27 3.24
152 153 6.535865 GCAAATTCATAAATTGCATGTGAGGA 59.464 34.615 7.39 0.00 35.27 3.71
153 154 6.537301 AGCAAATTCATAAATTGCATGTGAGG 59.463 34.615 13.25 0.00 35.27 3.86
154 155 7.534085 AGCAAATTCATAAATTGCATGTGAG 57.466 32.000 13.25 0.00 35.27 3.51
155 156 8.252417 AGTAGCAAATTCATAAATTGCATGTGA 58.748 29.630 13.25 0.00 35.27 3.58
156 157 8.325282 CAGTAGCAAATTCATAAATTGCATGTG 58.675 33.333 13.25 5.00 35.27 3.21
157 158 8.036575 ACAGTAGCAAATTCATAAATTGCATGT 58.963 29.630 13.25 11.38 35.27 3.21
158 159 8.415192 ACAGTAGCAAATTCATAAATTGCATG 57.585 30.769 13.25 10.91 35.27 4.06
159 160 9.090692 GAACAGTAGCAAATTCATAAATTGCAT 57.909 29.630 13.25 3.57 35.27 3.96
160 161 8.306038 AGAACAGTAGCAAATTCATAAATTGCA 58.694 29.630 13.25 0.00 35.27 4.08
161 162 8.589629 CAGAACAGTAGCAAATTCATAAATTGC 58.410 33.333 4.62 4.62 35.27 3.56
162 163 8.589629 GCAGAACAGTAGCAAATTCATAAATTG 58.410 33.333 0.00 0.00 35.27 2.32
163 164 7.761249 GGCAGAACAGTAGCAAATTCATAAATT 59.239 33.333 0.00 0.00 36.64 1.82
164 165 7.260603 GGCAGAACAGTAGCAAATTCATAAAT 58.739 34.615 0.00 0.00 0.00 1.40
165 166 6.350110 GGGCAGAACAGTAGCAAATTCATAAA 60.350 38.462 0.00 0.00 0.00 1.40
166 167 5.125417 GGGCAGAACAGTAGCAAATTCATAA 59.875 40.000 0.00 0.00 0.00 1.90
167 168 4.640201 GGGCAGAACAGTAGCAAATTCATA 59.360 41.667 0.00 0.00 0.00 2.15
168 169 3.445096 GGGCAGAACAGTAGCAAATTCAT 59.555 43.478 0.00 0.00 0.00 2.57
169 170 2.819608 GGGCAGAACAGTAGCAAATTCA 59.180 45.455 0.00 0.00 0.00 2.57
170 171 3.084786 AGGGCAGAACAGTAGCAAATTC 58.915 45.455 0.00 0.00 0.00 2.17
171 172 3.160679 AGGGCAGAACAGTAGCAAATT 57.839 42.857 0.00 0.00 0.00 1.82
172 173 2.887151 AGGGCAGAACAGTAGCAAAT 57.113 45.000 0.00 0.00 0.00 2.32
173 174 4.224147 TGTATAGGGCAGAACAGTAGCAAA 59.776 41.667 0.00 0.00 0.00 3.68
174 175 3.772572 TGTATAGGGCAGAACAGTAGCAA 59.227 43.478 0.00 0.00 0.00 3.91
175 176 3.132289 GTGTATAGGGCAGAACAGTAGCA 59.868 47.826 0.00 0.00 0.00 3.49
176 177 3.132289 TGTGTATAGGGCAGAACAGTAGC 59.868 47.826 0.00 0.00 0.00 3.58
177 178 5.339008 TTGTGTATAGGGCAGAACAGTAG 57.661 43.478 0.00 0.00 0.00 2.57
178 179 5.950544 ATTGTGTATAGGGCAGAACAGTA 57.049 39.130 0.00 0.00 0.00 2.74
179 180 4.844349 ATTGTGTATAGGGCAGAACAGT 57.156 40.909 0.00 0.00 0.00 3.55
180 181 6.515272 AAAATTGTGTATAGGGCAGAACAG 57.485 37.500 0.00 0.00 0.00 3.16
181 182 7.398829 TCTAAAATTGTGTATAGGGCAGAACA 58.601 34.615 0.00 0.00 0.00 3.18
182 183 7.859325 TCTAAAATTGTGTATAGGGCAGAAC 57.141 36.000 0.00 0.00 0.00 3.01
183 184 9.474313 AAATCTAAAATTGTGTATAGGGCAGAA 57.526 29.630 0.00 0.00 0.00 3.02
184 185 8.902806 CAAATCTAAAATTGTGTATAGGGCAGA 58.097 33.333 0.00 0.00 0.00 4.26
185 186 8.686334 ACAAATCTAAAATTGTGTATAGGGCAG 58.314 33.333 0.00 0.00 38.29 4.85
186 187 8.588290 ACAAATCTAAAATTGTGTATAGGGCA 57.412 30.769 0.00 0.00 38.29 5.36
206 207 9.988815 TGGCATTACTTTACATGTTTAACAAAT 57.011 25.926 2.30 0.00 0.00 2.32
207 208 9.250624 GTGGCATTACTTTACATGTTTAACAAA 57.749 29.630 2.30 0.00 0.00 2.83
208 209 7.868415 GGTGGCATTACTTTACATGTTTAACAA 59.132 33.333 2.30 0.00 0.00 2.83
209 210 7.014326 TGGTGGCATTACTTTACATGTTTAACA 59.986 33.333 2.30 0.00 0.00 2.41
210 211 7.371936 TGGTGGCATTACTTTACATGTTTAAC 58.628 34.615 2.30 0.00 0.00 2.01
211 212 7.526142 TGGTGGCATTACTTTACATGTTTAA 57.474 32.000 2.30 0.00 0.00 1.52
212 213 7.177568 ACATGGTGGCATTACTTTACATGTTTA 59.822 33.333 2.30 0.00 43.41 2.01
213 214 6.014669 ACATGGTGGCATTACTTTACATGTTT 60.015 34.615 2.30 0.00 43.41 2.83
214 215 5.480073 ACATGGTGGCATTACTTTACATGTT 59.520 36.000 2.30 0.00 43.41 2.71
215 216 5.016173 ACATGGTGGCATTACTTTACATGT 58.984 37.500 2.69 2.69 41.78 3.21
216 217 5.581126 ACATGGTGGCATTACTTTACATG 57.419 39.130 0.00 0.00 40.04 3.21
217 218 7.363443 GGTTAACATGGTGGCATTACTTTACAT 60.363 37.037 8.10 0.00 0.00 2.29
218 219 6.071840 GGTTAACATGGTGGCATTACTTTACA 60.072 38.462 8.10 0.00 0.00 2.41
219 220 6.152154 AGGTTAACATGGTGGCATTACTTTAC 59.848 38.462 8.10 0.00 0.00 2.01
220 221 6.249951 AGGTTAACATGGTGGCATTACTTTA 58.750 36.000 8.10 0.00 0.00 1.85
221 222 5.083821 AGGTTAACATGGTGGCATTACTTT 58.916 37.500 8.10 0.00 0.00 2.66
222 223 4.672899 AGGTTAACATGGTGGCATTACTT 58.327 39.130 8.10 0.00 0.00 2.24
223 224 4.316025 AGGTTAACATGGTGGCATTACT 57.684 40.909 8.10 0.00 0.00 2.24
224 225 5.507315 GCATAGGTTAACATGGTGGCATTAC 60.507 44.000 8.10 0.00 0.00 1.89
225 226 4.582656 GCATAGGTTAACATGGTGGCATTA 59.417 41.667 8.10 0.00 0.00 1.90
226 227 3.384467 GCATAGGTTAACATGGTGGCATT 59.616 43.478 8.10 0.00 0.00 3.56
227 228 2.958355 GCATAGGTTAACATGGTGGCAT 59.042 45.455 8.10 0.00 0.00 4.40
228 229 2.291217 TGCATAGGTTAACATGGTGGCA 60.291 45.455 8.10 6.87 0.00 4.92
229 230 2.374184 TGCATAGGTTAACATGGTGGC 58.626 47.619 8.10 4.39 0.00 5.01
230 231 5.596836 AAATGCATAGGTTAACATGGTGG 57.403 39.130 8.10 0.00 0.00 4.61
231 232 7.322664 AGAAAAATGCATAGGTTAACATGGTG 58.677 34.615 8.10 5.61 0.00 4.17
232 233 7.480760 AGAAAAATGCATAGGTTAACATGGT 57.519 32.000 8.10 0.00 0.00 3.55
233 234 7.920682 GGTAGAAAAATGCATAGGTTAACATGG 59.079 37.037 8.10 0.00 0.00 3.66
234 235 7.920682 GGGTAGAAAAATGCATAGGTTAACATG 59.079 37.037 8.10 4.81 0.00 3.21
235 236 7.069455 GGGGTAGAAAAATGCATAGGTTAACAT 59.931 37.037 8.10 2.34 0.00 2.71
236 237 6.378848 GGGGTAGAAAAATGCATAGGTTAACA 59.621 38.462 8.10 0.00 0.00 2.41
237 238 6.378848 TGGGGTAGAAAAATGCATAGGTTAAC 59.621 38.462 0.00 0.00 0.00 2.01
238 239 6.494952 TGGGGTAGAAAAATGCATAGGTTAA 58.505 36.000 0.00 0.00 0.00 2.01
239 240 6.080969 TGGGGTAGAAAAATGCATAGGTTA 57.919 37.500 0.00 0.00 0.00 2.85
240 241 4.941713 TGGGGTAGAAAAATGCATAGGTT 58.058 39.130 0.00 0.00 0.00 3.50
241 242 4.601406 TGGGGTAGAAAAATGCATAGGT 57.399 40.909 0.00 0.00 0.00 3.08
242 243 6.484364 AAATGGGGTAGAAAAATGCATAGG 57.516 37.500 0.00 0.00 0.00 2.57
243 244 8.006298 TGTAAATGGGGTAGAAAAATGCATAG 57.994 34.615 0.00 0.00 0.00 2.23
244 245 7.962995 TGTAAATGGGGTAGAAAAATGCATA 57.037 32.000 0.00 0.00 0.00 3.14
245 246 6.865834 TGTAAATGGGGTAGAAAAATGCAT 57.134 33.333 0.00 0.00 0.00 3.96
246 247 6.865834 ATGTAAATGGGGTAGAAAAATGCA 57.134 33.333 0.00 0.00 0.00 3.96
280 281 9.880157 ACTAAATAACCGTAGCTCTGAATTAAA 57.120 29.630 0.00 0.00 0.00 1.52
281 282 9.880157 AACTAAATAACCGTAGCTCTGAATTAA 57.120 29.630 0.00 0.00 0.00 1.40
284 285 9.477484 CATAACTAAATAACCGTAGCTCTGAAT 57.523 33.333 0.00 0.00 0.00 2.57
285 286 8.689061 TCATAACTAAATAACCGTAGCTCTGAA 58.311 33.333 0.00 0.00 0.00 3.02
286 287 8.229253 TCATAACTAAATAACCGTAGCTCTGA 57.771 34.615 0.00 0.00 0.00 3.27
287 288 8.867112 TTCATAACTAAATAACCGTAGCTCTG 57.133 34.615 0.00 0.00 0.00 3.35
308 309 9.787435 ATGCCATGCTAAAATGATTTATTTCAT 57.213 25.926 0.00 0.00 38.01 2.57
309 310 9.616156 AATGCCATGCTAAAATGATTTATTTCA 57.384 25.926 0.00 0.00 38.01 2.69
339 340 7.911362 AACATGTTGTTTGCATTTATTTTGC 57.089 28.000 11.07 0.00 37.26 3.68
360 361 7.273320 TCATCCGTGGTAAAATGTTTAAACA 57.727 32.000 22.58 22.58 44.06 2.83
361 362 8.576936 TTTCATCCGTGGTAAAATGTTTAAAC 57.423 30.769 11.54 11.54 0.00 2.01
362 363 9.765795 ATTTTCATCCGTGGTAAAATGTTTAAA 57.234 25.926 0.00 0.00 31.99 1.52
363 364 9.197694 CATTTTCATCCGTGGTAAAATGTTTAA 57.802 29.630 18.22 0.00 41.26 1.52
364 365 7.815068 CCATTTTCATCCGTGGTAAAATGTTTA 59.185 33.333 21.29 0.00 43.14 2.01
365 366 6.648725 CCATTTTCATCCGTGGTAAAATGTTT 59.351 34.615 21.29 0.00 43.14 2.83
366 367 6.162777 CCATTTTCATCCGTGGTAAAATGTT 58.837 36.000 21.29 0.00 43.14 2.71
367 368 5.719173 CCATTTTCATCCGTGGTAAAATGT 58.281 37.500 21.29 2.72 43.14 2.71
368 369 4.566360 GCCATTTTCATCCGTGGTAAAATG 59.434 41.667 18.87 18.87 43.77 2.32
369 370 4.221703 TGCCATTTTCATCCGTGGTAAAAT 59.778 37.500 0.00 0.00 33.07 1.82
370 371 3.574396 TGCCATTTTCATCCGTGGTAAAA 59.426 39.130 0.00 0.00 34.23 1.52
371 372 3.157881 TGCCATTTTCATCCGTGGTAAA 58.842 40.909 0.00 0.00 34.23 2.01
372 373 2.796557 TGCCATTTTCATCCGTGGTAA 58.203 42.857 0.00 0.00 34.23 2.85
373 374 2.498644 TGCCATTTTCATCCGTGGTA 57.501 45.000 0.00 0.00 34.23 3.25
374 375 1.626686 TTGCCATTTTCATCCGTGGT 58.373 45.000 0.00 0.00 34.23 4.16
375 376 2.739885 TTTGCCATTTTCATCCGTGG 57.260 45.000 0.00 0.00 34.84 4.94
376 377 6.907206 AATAATTTGCCATTTTCATCCGTG 57.093 33.333 0.00 0.00 0.00 4.94
377 378 9.260002 GATTAATAATTTGCCATTTTCATCCGT 57.740 29.630 0.00 0.00 0.00 4.69
378 379 9.480053 AGATTAATAATTTGCCATTTTCATCCG 57.520 29.630 0.00 0.00 0.00 4.18
401 402 9.893305 GTAAACTGCTTACAATTTTGTGTAGAT 57.107 29.630 6.21 0.00 42.31 1.98
402 403 8.894731 TGTAAACTGCTTACAATTTTGTGTAGA 58.105 29.630 6.21 0.00 45.52 2.59
435 436 9.905713 ACTCAATCTGTGCTTTATTATTAGGAA 57.094 29.630 0.00 0.00 0.00 3.36
436 437 9.547753 GACTCAATCTGTGCTTTATTATTAGGA 57.452 33.333 0.00 0.00 0.00 2.94
437 438 9.553064 AGACTCAATCTGTGCTTTATTATTAGG 57.447 33.333 0.00 0.00 35.81 2.69
439 440 9.547753 GGAGACTCAATCTGTGCTTTATTATTA 57.452 33.333 4.53 0.00 38.00 0.98
440 441 7.225538 CGGAGACTCAATCTGTGCTTTATTATT 59.774 37.037 4.53 0.00 38.00 1.40
441 442 6.703607 CGGAGACTCAATCTGTGCTTTATTAT 59.296 38.462 4.53 0.00 38.00 1.28
442 443 6.042777 CGGAGACTCAATCTGTGCTTTATTA 58.957 40.000 4.53 0.00 38.00 0.98
443 444 4.872691 CGGAGACTCAATCTGTGCTTTATT 59.127 41.667 4.53 0.00 38.00 1.40
444 445 4.437239 CGGAGACTCAATCTGTGCTTTAT 58.563 43.478 4.53 0.00 38.00 1.40
445 446 3.368427 CCGGAGACTCAATCTGTGCTTTA 60.368 47.826 0.00 0.00 38.00 1.85
446 447 2.613977 CCGGAGACTCAATCTGTGCTTT 60.614 50.000 0.00 0.00 38.00 3.51
447 448 1.066573 CCGGAGACTCAATCTGTGCTT 60.067 52.381 0.00 0.00 38.00 3.91
448 449 0.534412 CCGGAGACTCAATCTGTGCT 59.466 55.000 0.00 0.00 38.00 4.40
449 450 0.460987 CCCGGAGACTCAATCTGTGC 60.461 60.000 0.73 0.00 38.00 4.57
450 451 0.898320 ACCCGGAGACTCAATCTGTG 59.102 55.000 0.73 0.00 38.00 3.66
451 452 1.550976 GAACCCGGAGACTCAATCTGT 59.449 52.381 0.73 0.00 38.00 3.41
452 453 1.550524 TGAACCCGGAGACTCAATCTG 59.449 52.381 0.73 0.00 38.00 2.90
453 454 1.550976 GTGAACCCGGAGACTCAATCT 59.449 52.381 0.73 0.00 41.91 2.40
454 455 1.405661 GGTGAACCCGGAGACTCAATC 60.406 57.143 0.73 0.00 0.00 2.67
455 456 0.613777 GGTGAACCCGGAGACTCAAT 59.386 55.000 0.73 0.00 0.00 2.57
456 457 2.055299 GGTGAACCCGGAGACTCAA 58.945 57.895 0.73 0.00 0.00 3.02
457 458 3.787394 GGTGAACCCGGAGACTCA 58.213 61.111 0.73 0.00 0.00 3.41
466 467 1.905637 AAAAGGATGACGGTGAACCC 58.094 50.000 0.00 0.00 0.00 4.11
507 508 9.734620 CAACAGATTGATGAGTTTGTCTAAAAA 57.265 29.630 0.00 0.00 38.15 1.94
508 509 8.902806 ACAACAGATTGATGAGTTTGTCTAAAA 58.097 29.630 0.00 0.00 39.30 1.52
509 510 8.450578 ACAACAGATTGATGAGTTTGTCTAAA 57.549 30.769 0.00 0.00 39.30 1.85
510 511 8.450578 AACAACAGATTGATGAGTTTGTCTAA 57.549 30.769 0.00 0.00 39.30 2.10
511 512 8.344831 CAAACAACAGATTGATGAGTTTGTCTA 58.655 33.333 0.00 0.00 40.52 2.59
512 513 6.949352 AACAACAGATTGATGAGTTTGTCT 57.051 33.333 0.00 0.00 39.30 3.41
513 514 6.974622 ACAAACAACAGATTGATGAGTTTGTC 59.025 34.615 19.25 0.00 46.67 3.18
514 515 6.866480 ACAAACAACAGATTGATGAGTTTGT 58.134 32.000 19.25 19.25 45.89 2.83
515 516 6.753279 ACACAAACAACAGATTGATGAGTTTG 59.247 34.615 18.44 18.44 44.88 2.93
516 517 6.866480 ACACAAACAACAGATTGATGAGTTT 58.134 32.000 0.00 0.00 39.30 2.66
517 518 6.455360 ACACAAACAACAGATTGATGAGTT 57.545 33.333 0.00 0.00 39.30 3.01
518 519 6.455360 AACACAAACAACAGATTGATGAGT 57.545 33.333 0.00 0.00 39.30 3.41
519 520 9.467258 AATAAACACAAACAACAGATTGATGAG 57.533 29.630 0.00 0.00 39.30 2.90
541 542 9.353999 CGTGCATGCTTACTAGTCATATAATAA 57.646 33.333 20.33 0.00 0.00 1.40
542 543 8.520351 ACGTGCATGCTTACTAGTCATATAATA 58.480 33.333 20.33 0.00 0.00 0.98
543 544 7.329471 CACGTGCATGCTTACTAGTCATATAAT 59.671 37.037 20.33 0.00 0.00 1.28
544 545 6.640907 CACGTGCATGCTTACTAGTCATATAA 59.359 38.462 20.33 0.00 0.00 0.98
545 546 6.149633 CACGTGCATGCTTACTAGTCATATA 58.850 40.000 20.33 0.00 0.00 0.86
546 547 4.984785 CACGTGCATGCTTACTAGTCATAT 59.015 41.667 20.33 0.00 0.00 1.78
547 548 4.359706 CACGTGCATGCTTACTAGTCATA 58.640 43.478 20.33 0.00 0.00 2.15
548 549 3.190079 CACGTGCATGCTTACTAGTCAT 58.810 45.455 20.33 0.00 0.00 3.06
549 550 2.606108 CACGTGCATGCTTACTAGTCA 58.394 47.619 20.33 0.00 0.00 3.41
608 610 8.680903 ACTTCTGAATAGGCATACTTTTCATTG 58.319 33.333 0.00 0.00 43.22 2.82
621 623 3.273434 TGTCATGCACTTCTGAATAGGC 58.727 45.455 0.00 0.00 0.00 3.93
675 678 8.625651 TCAATTTGTTAATCTTTTGGTCTTCGA 58.374 29.630 0.00 0.00 0.00 3.71
734 737 6.085555 TGAATCGGAGCGAGTATAAGATTT 57.914 37.500 0.00 0.00 39.91 2.17
770 774 8.287350 ACTCCCTACTAGGTATATCAGTTTGAA 58.713 37.037 1.25 0.00 31.93 2.69
946 1018 3.643159 AACAGCCTTTTCGGTCATTTC 57.357 42.857 0.00 0.00 34.25 2.17
1003 1087 3.598019 AATACACATACAACGTCCGGT 57.402 42.857 0.00 0.00 0.00 5.28
1017 1101 4.615541 GCCGCTCAACAAAAAGTAATACAC 59.384 41.667 0.00 0.00 0.00 2.90
1092 1899 6.327177 TCGATAGCGTTTCACTTTGATTAC 57.673 37.500 0.00 0.00 38.98 1.89
1439 2252 0.878523 CGCAACGTTCTCAAGGGACA 60.879 55.000 0.00 0.00 0.00 4.02
1446 2259 0.937699 CGGAAGACGCAACGTTCTCA 60.938 55.000 0.00 0.00 41.37 3.27
1461 2274 3.454573 CGGTCGATCCCCACGGAA 61.455 66.667 0.00 0.00 43.10 4.30
1481 2294 3.050275 GGCACTTGGTGAGGTCGC 61.050 66.667 1.57 0.00 35.23 5.19
1522 2335 3.545481 GCATCGGTGAGCACGTCG 61.545 66.667 0.00 0.00 0.00 5.12
1526 2339 3.188786 GACGGCATCGGTGAGCAC 61.189 66.667 0.00 0.00 41.39 4.40
1645 2458 0.885196 GCATCTAAAACCAACCCGCA 59.115 50.000 0.00 0.00 0.00 5.69
1696 2509 7.750229 AATAATGCACTCAATCGTTGGATAT 57.250 32.000 0.00 0.00 31.01 1.63
2366 3346 8.938883 AGTCCAATAACATATACATTCCTGAGT 58.061 33.333 0.00 0.00 0.00 3.41
2369 3349 9.436957 GGTAGTCCAATAACATATACATTCCTG 57.563 37.037 0.00 0.00 0.00 3.86
2370 3350 9.166222 TGGTAGTCCAATAACATATACATTCCT 57.834 33.333 0.00 0.00 41.25 3.36
2387 3367 3.537795 ACTGGTAGAGTTGGTAGTCCA 57.462 47.619 0.00 0.00 42.66 4.02
2388 3368 4.082136 CAGAACTGGTAGAGTTGGTAGTCC 60.082 50.000 0.00 0.00 45.48 3.85
2389 3369 4.082136 CCAGAACTGGTAGAGTTGGTAGTC 60.082 50.000 12.21 0.00 45.48 2.59
2390 3370 3.833070 CCAGAACTGGTAGAGTTGGTAGT 59.167 47.826 12.21 0.00 45.48 2.73
2391 3371 4.457834 CCAGAACTGGTAGAGTTGGTAG 57.542 50.000 12.21 0.00 45.48 3.18
2404 3384 7.282675 AGCTTCAATCATCTTAATCCAGAACTG 59.717 37.037 0.00 0.00 0.00 3.16
2405 3385 7.344913 AGCTTCAATCATCTTAATCCAGAACT 58.655 34.615 0.00 0.00 0.00 3.01
2406 3386 7.565323 AGCTTCAATCATCTTAATCCAGAAC 57.435 36.000 0.00 0.00 0.00 3.01
2407 3387 9.685276 TTTAGCTTCAATCATCTTAATCCAGAA 57.315 29.630 0.00 0.00 0.00 3.02
2408 3388 9.334947 CTTTAGCTTCAATCATCTTAATCCAGA 57.665 33.333 0.00 0.00 0.00 3.86
2409 3389 9.118300 ACTTTAGCTTCAATCATCTTAATCCAG 57.882 33.333 0.00 0.00 0.00 3.86
2417 3397 9.593134 CAACTACTACTTTAGCTTCAATCATCT 57.407 33.333 0.00 0.00 0.00 2.90
2418 3398 9.372369 ACAACTACTACTTTAGCTTCAATCATC 57.628 33.333 0.00 0.00 0.00 2.92
2419 3399 9.155975 CACAACTACTACTTTAGCTTCAATCAT 57.844 33.333 0.00 0.00 0.00 2.45
2420 3400 7.117812 GCACAACTACTACTTTAGCTTCAATCA 59.882 37.037 0.00 0.00 0.00 2.57
2421 3401 7.413109 GGCACAACTACTACTTTAGCTTCAATC 60.413 40.741 0.00 0.00 0.00 2.67
2422 3402 6.371825 GGCACAACTACTACTTTAGCTTCAAT 59.628 38.462 0.00 0.00 0.00 2.57
2423 3403 5.699458 GGCACAACTACTACTTTAGCTTCAA 59.301 40.000 0.00 0.00 0.00 2.69
2424 3404 5.221561 TGGCACAACTACTACTTTAGCTTCA 60.222 40.000 0.00 0.00 31.92 3.02
2425 3405 5.120363 GTGGCACAACTACTACTTTAGCTTC 59.880 44.000 13.86 0.00 44.16 3.86
2426 3406 4.995487 GTGGCACAACTACTACTTTAGCTT 59.005 41.667 13.86 0.00 44.16 3.74
2427 3407 4.283722 AGTGGCACAACTACTACTTTAGCT 59.716 41.667 21.41 0.00 44.16 3.32
2428 3408 4.389077 CAGTGGCACAACTACTACTTTAGC 59.611 45.833 21.41 0.00 44.16 3.09
2429 3409 5.779922 TCAGTGGCACAACTACTACTTTAG 58.220 41.667 21.41 0.00 44.16 1.85
2430 3410 5.794726 TCAGTGGCACAACTACTACTTTA 57.205 39.130 21.41 0.00 44.16 1.85
2431 3411 4.682778 TCAGTGGCACAACTACTACTTT 57.317 40.909 21.41 0.00 44.16 2.66
2432 3412 4.682778 TTCAGTGGCACAACTACTACTT 57.317 40.909 21.41 0.00 44.16 2.24
2433 3413 4.682778 TTTCAGTGGCACAACTACTACT 57.317 40.909 21.41 0.00 44.16 2.57
2434 3414 5.941948 AATTTCAGTGGCACAACTACTAC 57.058 39.130 21.41 0.00 44.16 2.73
2435 3415 6.993308 TGTAAATTTCAGTGGCACAACTACTA 59.007 34.615 21.41 0.00 44.16 1.82
2436 3416 5.825679 TGTAAATTTCAGTGGCACAACTACT 59.174 36.000 21.41 0.00 44.16 2.57
2437 3417 6.067263 TGTAAATTTCAGTGGCACAACTAC 57.933 37.500 21.41 10.76 44.16 2.73
2438 3418 6.500041 GTTGTAAATTTCAGTGGCACAACTA 58.500 36.000 21.41 2.59 44.16 2.24
2439 3419 5.127031 AGTTGTAAATTTCAGTGGCACAACT 59.873 36.000 21.41 20.12 45.79 3.16
2440 3420 5.348164 AGTTGTAAATTTCAGTGGCACAAC 58.652 37.500 21.41 17.30 44.16 3.32
2441 3421 5.451242 GGAGTTGTAAATTTCAGTGGCACAA 60.451 40.000 21.41 5.82 44.16 3.33
2442 3422 4.037446 GGAGTTGTAAATTTCAGTGGCACA 59.963 41.667 21.41 0.00 0.00 4.57
2443 3423 4.037446 TGGAGTTGTAAATTTCAGTGGCAC 59.963 41.667 10.29 10.29 0.00 5.01
2444 3424 4.037446 GTGGAGTTGTAAATTTCAGTGGCA 59.963 41.667 0.00 0.00 0.00 4.92
2445 3425 4.037446 TGTGGAGTTGTAAATTTCAGTGGC 59.963 41.667 0.00 0.00 0.00 5.01
2446 3426 5.067153 TGTGTGGAGTTGTAAATTTCAGTGG 59.933 40.000 0.00 0.00 0.00 4.00
2447 3427 6.130298 TGTGTGGAGTTGTAAATTTCAGTG 57.870 37.500 0.00 0.00 0.00 3.66
2448 3428 6.959639 ATGTGTGGAGTTGTAAATTTCAGT 57.040 33.333 0.00 0.00 0.00 3.41
2449 3429 7.920151 TGAAATGTGTGGAGTTGTAAATTTCAG 59.080 33.333 0.00 0.00 37.67 3.02
2450 3430 7.704472 GTGAAATGTGTGGAGTTGTAAATTTCA 59.296 33.333 0.00 0.00 39.29 2.69
2451 3431 7.096640 CGTGAAATGTGTGGAGTTGTAAATTTC 60.097 37.037 0.00 0.00 34.76 2.17
2452 3432 6.695278 CGTGAAATGTGTGGAGTTGTAAATTT 59.305 34.615 0.00 0.00 0.00 1.82
2453 3433 6.183360 ACGTGAAATGTGTGGAGTTGTAAATT 60.183 34.615 0.00 0.00 32.58 1.82
2575 3555 6.320926 TGCTTAAATATAAGATGGCAGCAACA 59.679 34.615 5.19 0.00 40.90 3.33
2576 3556 6.638468 GTGCTTAAATATAAGATGGCAGCAAC 59.362 38.462 5.19 0.00 40.90 4.17
2579 3559 6.016777 AGTGTGCTTAAATATAAGATGGCAGC 60.017 38.462 0.00 0.00 40.90 5.25
2621 3605 6.772233 TGCATCATGTTAACCTACAATAGCAT 59.228 34.615 2.48 0.00 0.00 3.79
2768 3752 5.988310 TCATTTGCAGGTTTTGATCAGAT 57.012 34.783 0.00 0.00 0.00 2.90
2877 3865 7.323420 CACCAAGAACATTGTCTACAGAGATA 58.677 38.462 0.00 0.00 33.14 1.98
2974 3962 4.576053 GGTCAGCTATATGTTGCATTGTCA 59.424 41.667 0.00 0.00 0.00 3.58
3011 3999 1.411612 CGGTATTTACCTTCCCGAGCT 59.588 52.381 5.29 0.00 44.25 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.