Multiple sequence alignment - TraesCS2B01G254700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G254700 chr2B 100.000 4022 0 0 1 4022 285057358 285053337 0.000000e+00 7428.0
1 TraesCS2B01G254700 chr2B 93.116 276 15 4 1 272 288309056 288309331 6.260000e-108 401.0
2 TraesCS2B01G254700 chr2B 93.091 275 16 2 1 272 408625193 408625467 2.250000e-107 399.0
3 TraesCS2B01G254700 chr2B 92.754 276 17 3 1 273 119305508 119305783 2.910000e-106 396.0
4 TraesCS2B01G254700 chr2B 92.754 276 16 3 1 272 213917187 213916912 2.910000e-106 396.0
5 TraesCS2B01G254700 chr2B 84.393 346 50 4 294 637 760096548 760096891 1.790000e-88 337.0
6 TraesCS2B01G254700 chr2B 97.917 192 2 2 3832 4022 432911437 432911627 8.330000e-87 331.0
7 TraesCS2B01G254700 chr2B 97.619 42 0 1 3699 3740 285053755 285053715 2.010000e-08 71.3
8 TraesCS2B01G254700 chr2D 97.476 2972 40 15 779 3740 257386511 257389457 0.000000e+00 5040.0
9 TraesCS2B01G254700 chr2D 78.102 274 34 17 3740 4012 44350515 44350267 2.500000e-32 150.0
10 TraesCS2B01G254700 chr2D 78.229 271 32 17 3740 4009 86093612 86093368 9.010000e-32 148.0
11 TraesCS2B01G254700 chr2D 77.682 233 50 1 272 502 633562635 633562403 1.510000e-29 141.0
12 TraesCS2B01G254700 chr2D 85.455 110 12 2 3882 3987 277964684 277964793 1.180000e-20 111.0
13 TraesCS2B01G254700 chr2D 97.619 42 0 1 3699 3740 257389319 257389359 2.010000e-08 71.3
14 TraesCS2B01G254700 chr2A 97.343 2898 55 13 849 3740 293154175 293151294 0.000000e+00 4905.0
15 TraesCS2B01G254700 chr2A 77.778 225 33 12 3730 3948 702251653 702251866 5.460000e-24 122.0
16 TraesCS2B01G254700 chr2A 97.619 42 0 1 3699 3740 293151432 293151392 2.010000e-08 71.3
17 TraesCS2B01G254700 chr2A 89.796 49 4 1 3725 3773 89114771 89114818 1.210000e-05 62.1
18 TraesCS2B01G254700 chr6D 93.455 275 15 3 1 272 461793814 461793540 4.840000e-109 405.0
19 TraesCS2B01G254700 chr6D 84.469 367 46 9 282 644 418878317 418878676 6.400000e-93 351.0
20 TraesCS2B01G254700 chr6D 100.000 38 0 0 3830 3867 446794962 446794925 2.010000e-08 71.3
21 TraesCS2B01G254700 chr7B 93.704 270 14 2 6 272 442432850 442432581 6.260000e-108 401.0
22 TraesCS2B01G254700 chr7B 93.091 275 16 3 1 272 277261389 277261115 2.250000e-107 399.0
23 TraesCS2B01G254700 chr7B 78.014 282 38 17 3736 4013 190059560 190059299 5.380000e-34 156.0
24 TraesCS2B01G254700 chr7B 97.619 42 0 1 3739 3779 36975867 36975908 2.010000e-08 71.3
25 TraesCS2B01G254700 chr4B 93.091 275 16 2 1 272 375674952 375674678 2.250000e-107 399.0
26 TraesCS2B01G254700 chr4B 87.616 323 30 6 3380 3698 574339058 574339374 2.280000e-97 366.0
27 TraesCS2B01G254700 chr4D 92.780 277 14 5 1 272 417831518 417831243 2.910000e-106 396.0
28 TraesCS2B01G254700 chr4D 87.730 326 30 7 3380 3701 343455908 343455589 4.910000e-99 372.0
29 TraesCS2B01G254700 chr4D 77.255 255 28 16 3755 4006 108895014 108895241 5.460000e-24 122.0
30 TraesCS2B01G254700 chr5B 89.776 313 24 5 3388 3698 320645270 320645576 1.050000e-105 394.0
31 TraesCS2B01G254700 chr5B 84.840 343 46 6 303 643 249376574 249376912 1.380000e-89 340.0
32 TraesCS2B01G254700 chr5B 100.000 38 0 0 3703 3740 320645488 320645525 2.010000e-08 71.3
33 TraesCS2B01G254700 chr5B 93.182 44 2 1 3739 3782 42467180 42467138 3.360000e-06 63.9
34 TraesCS2B01G254700 chr4A 86.301 365 45 3 273 637 245253354 245252995 3.770000e-105 392.0
35 TraesCS2B01G254700 chr4A 88.889 324 28 6 3380 3701 730196056 730195739 3.770000e-105 392.0
36 TraesCS2B01G254700 chr4A 100.000 38 0 0 3703 3740 730195830 730195793 2.010000e-08 71.3
37 TraesCS2B01G254700 chr4A 90.566 53 3 2 3739 3790 923335 923386 7.210000e-08 69.4
38 TraesCS2B01G254700 chr4A 93.333 45 1 2 3739 3781 418670404 418670360 9.330000e-07 65.8
39 TraesCS2B01G254700 chr4A 91.667 48 2 2 3739 3785 718719636 718719590 9.330000e-07 65.8
40 TraesCS2B01G254700 chr5A 86.027 365 46 3 273 637 488886186 488885827 1.750000e-103 387.0
41 TraesCS2B01G254700 chr5A 100.000 35 0 0 3739 3773 659558105 659558071 9.330000e-07 65.8
42 TraesCS2B01G254700 chr1D 87.812 320 29 7 3380 3695 484177678 484177991 2.280000e-97 366.0
43 TraesCS2B01G254700 chr1D 94.231 52 1 2 3732 3781 267608233 267608182 1.200000e-10 78.7
44 TraesCS2B01G254700 chr1A 86.810 326 33 6 3380 3701 368575513 368575194 4.940000e-94 355.0
45 TraesCS2B01G254700 chr5D 86.997 323 30 8 3380 3698 487570447 487570761 1.780000e-93 353.0
46 TraesCS2B01G254700 chr3A 83.578 341 45 4 298 638 669990476 669990805 3.900000e-80 309.0
47 TraesCS2B01G254700 chr6A 79.023 348 62 9 294 637 486018062 486017722 1.120000e-55 228.0
48 TraesCS2B01G254700 chr7D 91.339 127 6 3 3898 4022 55560897 55561020 6.910000e-38 169.0
49 TraesCS2B01G254700 chr3D 78.623 276 32 16 3739 4013 574889649 574889898 1.500000e-34 158.0
50 TraesCS2B01G254700 chr1B 73.955 311 62 17 280 582 388855240 388855539 1.530000e-19 108.0
51 TraesCS2B01G254700 chr6B 91.304 46 3 1 3737 3781 657197000 657197045 1.210000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G254700 chr2B 285053337 285057358 4021 True 3749.65 7428 98.8095 1 4022 2 chr2B.!!$R2 4021
1 TraesCS2B01G254700 chr2D 257386511 257389457 2946 False 2555.65 5040 97.5475 779 3740 2 chr2D.!!$F2 2961
2 TraesCS2B01G254700 chr2A 293151294 293154175 2881 True 2488.15 4905 97.4810 849 3740 2 chr2A.!!$R1 2891

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
321 322 0.033228 CCGCATCCCTAGCTCTCTTG 59.967 60.0 0.00 0.00 0.00 3.02 F
554 555 0.033699 GAGGAGAAGGGGCAAGCAAT 60.034 55.0 0.00 0.00 0.00 3.56 F
586 587 0.041090 GAGGGGAAGGATGGGCAAAA 59.959 55.0 0.00 0.00 0.00 2.44 F
624 625 0.099968 TGTCGTAGATAGCACGTGCC 59.900 55.0 35.51 21.13 40.14 5.01 F
815 816 0.108138 ATTTCGCACTTCTCCCTCGG 60.108 55.0 0.00 0.00 0.00 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2007 2014 0.390472 GGCTGCGCTTAGACTTGACT 60.390 55.000 9.73 0.00 0.00 3.41 R
2169 2176 3.076621 CACCTTAAGATGTTCAGCTGCA 58.923 45.455 9.47 2.06 0.00 4.41 R
2555 2562 0.391263 CCGGAACACCTCAAGCCTAC 60.391 60.000 0.00 0.00 0.00 3.18 R
2811 2818 2.208431 GCCCTTGAGACATCAATCGAG 58.792 52.381 0.00 0.00 44.32 4.04 R
3054 3061 9.804758 TTACGAAAATGTTACACAAAGGAAAAT 57.195 25.926 0.00 0.00 0.00 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 4.329545 GCCTGGCCTTGGTCGTCA 62.330 66.667 7.66 0.00 0.00 4.35
33 34 2.671070 CCTGGCCTTGGTCGTCAT 59.329 61.111 3.32 0.00 0.00 3.06
34 35 1.746615 CCTGGCCTTGGTCGTCATG 60.747 63.158 3.32 0.00 0.00 3.07
35 36 1.746615 CTGGCCTTGGTCGTCATGG 60.747 63.158 3.32 8.33 41.96 3.66
38 39 4.722193 CCTTGGTCGTCATGGCTT 57.278 55.556 0.00 0.00 34.50 4.35
39 40 2.174334 CCTTGGTCGTCATGGCTTG 58.826 57.895 0.00 0.00 34.50 4.01
40 41 1.503542 CTTGGTCGTCATGGCTTGC 59.496 57.895 0.00 0.00 0.00 4.01
41 42 2.244436 CTTGGTCGTCATGGCTTGCG 62.244 60.000 0.00 9.67 0.00 4.85
42 43 2.742372 GGTCGTCATGGCTTGCGT 60.742 61.111 13.58 0.00 0.00 5.24
43 44 2.740714 GGTCGTCATGGCTTGCGTC 61.741 63.158 13.58 9.82 0.00 5.19
44 45 2.027073 GTCGTCATGGCTTGCGTCA 61.027 57.895 13.58 0.00 0.00 4.35
45 46 2.027073 TCGTCATGGCTTGCGTCAC 61.027 57.895 13.58 0.31 0.00 3.67
46 47 2.476051 GTCATGGCTTGCGTCACG 59.524 61.111 0.00 0.00 0.00 4.35
47 48 2.741985 TCATGGCTTGCGTCACGG 60.742 61.111 0.00 0.00 0.00 4.94
48 49 3.803082 CATGGCTTGCGTCACGGG 61.803 66.667 0.00 0.00 0.00 5.28
49 50 4.015406 ATGGCTTGCGTCACGGGA 62.015 61.111 0.00 0.00 0.00 5.14
50 51 3.545124 ATGGCTTGCGTCACGGGAA 62.545 57.895 0.00 0.00 0.00 3.97
51 52 3.723348 GGCTTGCGTCACGGGAAC 61.723 66.667 0.00 0.00 0.00 3.62
77 78 1.880941 AGGTACCCCTCACCTTGATC 58.119 55.000 8.74 0.00 44.18 2.92
78 79 1.366435 AGGTACCCCTCACCTTGATCT 59.634 52.381 8.74 0.00 44.18 2.75
79 80 1.763545 GGTACCCCTCACCTTGATCTC 59.236 57.143 0.00 0.00 32.98 2.75
80 81 2.627217 GGTACCCCTCACCTTGATCTCT 60.627 54.545 0.00 0.00 32.98 3.10
81 82 1.872773 ACCCCTCACCTTGATCTCTC 58.127 55.000 0.00 0.00 0.00 3.20
82 83 1.127343 CCCCTCACCTTGATCTCTCC 58.873 60.000 0.00 0.00 0.00 3.71
83 84 0.749649 CCCTCACCTTGATCTCTCCG 59.250 60.000 0.00 0.00 0.00 4.63
84 85 0.103937 CCTCACCTTGATCTCTCCGC 59.896 60.000 0.00 0.00 0.00 5.54
85 86 0.103937 CTCACCTTGATCTCTCCGCC 59.896 60.000 0.00 0.00 0.00 6.13
86 87 1.144936 CACCTTGATCTCTCCGCCC 59.855 63.158 0.00 0.00 0.00 6.13
87 88 2.066999 ACCTTGATCTCTCCGCCCC 61.067 63.158 0.00 0.00 0.00 5.80
88 89 2.419198 CTTGATCTCTCCGCCCCG 59.581 66.667 0.00 0.00 0.00 5.73
107 108 4.463879 CGAGCCTGCCTGGTGAGG 62.464 72.222 9.00 9.00 43.19 3.86
128 129 4.143740 CTCCTGAGGAGGCCTTGT 57.856 61.111 20.90 0.00 45.43 3.16
129 130 1.601171 CTCCTGAGGAGGCCTTGTG 59.399 63.158 20.90 0.00 45.43 3.33
130 131 1.152030 TCCTGAGGAGGCCTTGTGT 60.152 57.895 6.77 0.00 39.57 3.72
131 132 1.194781 TCCTGAGGAGGCCTTGTGTC 61.195 60.000 6.77 1.85 39.57 3.67
132 133 1.079543 CTGAGGAGGCCTTGTGTCG 60.080 63.158 6.77 0.00 31.76 4.35
133 134 1.821061 CTGAGGAGGCCTTGTGTCGT 61.821 60.000 6.77 0.00 31.76 4.34
134 135 1.079750 GAGGAGGCCTTGTGTCGTC 60.080 63.158 6.77 0.59 31.76 4.20
135 136 2.047179 GGAGGCCTTGTGTCGTCC 60.047 66.667 6.77 0.00 0.00 4.79
136 137 2.432628 GAGGCCTTGTGTCGTCCG 60.433 66.667 6.77 0.00 0.00 4.79
137 138 4.681978 AGGCCTTGTGTCGTCCGC 62.682 66.667 0.00 0.00 0.00 5.54
139 140 4.681978 GCCTTGTGTCGTCCGCCT 62.682 66.667 0.00 0.00 0.00 5.52
140 141 2.432628 CCTTGTGTCGTCCGCCTC 60.433 66.667 0.00 0.00 0.00 4.70
141 142 2.805353 CTTGTGTCGTCCGCCTCG 60.805 66.667 0.00 0.00 0.00 4.63
171 172 3.211288 CCTCGCGAGGGTCTTGAT 58.789 61.111 41.47 0.00 44.87 2.57
172 173 1.517832 CCTCGCGAGGGTCTTGATT 59.482 57.895 41.47 0.00 44.87 2.57
173 174 0.807667 CCTCGCGAGGGTCTTGATTG 60.808 60.000 41.47 16.37 44.87 2.67
174 175 0.108615 CTCGCGAGGGTCTTGATTGT 60.109 55.000 28.40 0.00 0.00 2.71
175 176 0.320374 TCGCGAGGGTCTTGATTGTT 59.680 50.000 3.71 0.00 0.00 2.83
176 177 0.443869 CGCGAGGGTCTTGATTGTTG 59.556 55.000 0.00 0.00 0.00 3.33
177 178 0.804989 GCGAGGGTCTTGATTGTTGG 59.195 55.000 0.00 0.00 0.00 3.77
178 179 1.882352 GCGAGGGTCTTGATTGTTGGT 60.882 52.381 0.00 0.00 0.00 3.67
179 180 2.504367 CGAGGGTCTTGATTGTTGGTT 58.496 47.619 0.00 0.00 0.00 3.67
180 181 2.226437 CGAGGGTCTTGATTGTTGGTTG 59.774 50.000 0.00 0.00 0.00 3.77
181 182 3.486383 GAGGGTCTTGATTGTTGGTTGA 58.514 45.455 0.00 0.00 0.00 3.18
182 183 3.222603 AGGGTCTTGATTGTTGGTTGAC 58.777 45.455 0.00 0.00 0.00 3.18
183 184 2.031157 GGGTCTTGATTGTTGGTTGACG 60.031 50.000 0.00 0.00 0.00 4.35
184 185 2.875933 GGTCTTGATTGTTGGTTGACGA 59.124 45.455 0.00 0.00 0.00 4.20
185 186 3.314080 GGTCTTGATTGTTGGTTGACGAA 59.686 43.478 0.00 0.00 0.00 3.85
186 187 4.527564 GTCTTGATTGTTGGTTGACGAAG 58.472 43.478 0.00 0.00 0.00 3.79
187 188 4.272504 GTCTTGATTGTTGGTTGACGAAGA 59.727 41.667 0.00 0.00 0.00 2.87
188 189 4.272504 TCTTGATTGTTGGTTGACGAAGAC 59.727 41.667 0.00 0.00 0.00 3.01
189 190 2.875933 TGATTGTTGGTTGACGAAGACC 59.124 45.455 0.00 0.00 36.45 3.85
190 191 1.292061 TTGTTGGTTGACGAAGACCG 58.708 50.000 0.00 0.00 45.44 4.79
191 192 0.531090 TGTTGGTTGACGAAGACCGG 60.531 55.000 0.00 0.00 43.93 5.28
197 198 2.202531 GACGAAGACCGGCCGTAC 60.203 66.667 26.12 17.28 41.44 3.67
198 199 2.674380 ACGAAGACCGGCCGTACT 60.674 61.111 26.12 19.37 43.93 2.73
199 200 2.202570 CGAAGACCGGCCGTACTG 60.203 66.667 26.12 11.36 33.91 2.74
209 210 3.319198 CCGTACTGGGCCACTGGT 61.319 66.667 0.00 1.19 0.00 4.00
210 211 2.047274 CGTACTGGGCCACTGGTG 60.047 66.667 0.00 0.00 0.00 4.17
243 244 4.711949 CCGCAGGCAGGCAAGTCT 62.712 66.667 0.00 0.00 46.14 3.24
244 245 3.429141 CGCAGGCAGGCAAGTCTG 61.429 66.667 7.14 7.14 43.93 3.51
245 246 3.060615 GCAGGCAGGCAAGTCTGG 61.061 66.667 12.46 0.00 41.45 3.86
246 247 2.360852 CAGGCAGGCAAGTCTGGG 60.361 66.667 3.62 0.00 37.58 4.45
247 248 3.655211 AGGCAGGCAAGTCTGGGG 61.655 66.667 3.62 0.00 35.43 4.96
248 249 3.650950 GGCAGGCAAGTCTGGGGA 61.651 66.667 3.62 0.00 35.43 4.81
249 250 2.360475 GCAGGCAAGTCTGGGGAC 60.360 66.667 3.62 0.00 42.41 4.46
262 263 2.931649 GGGACCCCCGTTCCAGAA 60.932 66.667 0.00 0.00 37.63 3.02
263 264 2.350134 GGACCCCCGTTCCAGAAC 59.650 66.667 0.23 0.23 37.92 3.01
271 272 3.550656 GTTCCAGAACGCCGACAG 58.449 61.111 0.00 0.00 0.00 3.51
272 273 2.357034 TTCCAGAACGCCGACAGC 60.357 61.111 0.00 0.00 38.52 4.40
273 274 3.876589 TTCCAGAACGCCGACAGCC 62.877 63.158 0.00 0.00 38.78 4.85
274 275 4.379243 CCAGAACGCCGACAGCCT 62.379 66.667 0.00 0.00 38.78 4.58
275 276 3.114616 CAGAACGCCGACAGCCTG 61.115 66.667 0.00 0.00 38.78 4.85
313 314 3.560251 CCACCCCCGCATCCCTAG 61.560 72.222 0.00 0.00 0.00 3.02
314 315 4.256180 CACCCCCGCATCCCTAGC 62.256 72.222 0.00 0.00 0.00 3.42
315 316 4.499116 ACCCCCGCATCCCTAGCT 62.499 66.667 0.00 0.00 0.00 3.32
316 317 3.631046 CCCCCGCATCCCTAGCTC 61.631 72.222 0.00 0.00 0.00 4.09
317 318 2.525381 CCCCGCATCCCTAGCTCT 60.525 66.667 0.00 0.00 0.00 4.09
318 319 2.578714 CCCCGCATCCCTAGCTCTC 61.579 68.421 0.00 0.00 0.00 3.20
319 320 1.532794 CCCGCATCCCTAGCTCTCT 60.533 63.158 0.00 0.00 0.00 3.10
320 321 1.118356 CCCGCATCCCTAGCTCTCTT 61.118 60.000 0.00 0.00 0.00 2.85
321 322 0.033228 CCGCATCCCTAGCTCTCTTG 59.967 60.000 0.00 0.00 0.00 3.02
322 323 1.035923 CGCATCCCTAGCTCTCTTGA 58.964 55.000 0.00 0.00 0.00 3.02
323 324 1.269517 CGCATCCCTAGCTCTCTTGAC 60.270 57.143 0.00 0.00 0.00 3.18
324 325 1.269517 GCATCCCTAGCTCTCTTGACG 60.270 57.143 0.00 0.00 0.00 4.35
325 326 2.302260 CATCCCTAGCTCTCTTGACGA 58.698 52.381 0.00 0.00 0.00 4.20
326 327 2.738587 TCCCTAGCTCTCTTGACGAT 57.261 50.000 0.00 0.00 0.00 3.73
327 328 2.302260 TCCCTAGCTCTCTTGACGATG 58.698 52.381 0.00 0.00 0.00 3.84
328 329 2.092375 TCCCTAGCTCTCTTGACGATGA 60.092 50.000 0.00 0.00 0.00 2.92
329 330 2.293122 CCCTAGCTCTCTTGACGATGAG 59.707 54.545 0.00 0.00 0.00 2.90
331 332 2.970576 GCTCTCTTGACGATGAGCC 58.029 57.895 0.00 0.00 44.16 4.70
332 333 0.459489 GCTCTCTTGACGATGAGCCT 59.541 55.000 0.00 0.00 44.16 4.58
333 334 1.802136 GCTCTCTTGACGATGAGCCTG 60.802 57.143 0.00 0.00 44.16 4.85
334 335 1.476085 CTCTCTTGACGATGAGCCTGT 59.524 52.381 0.00 0.00 0.00 4.00
335 336 1.895798 TCTCTTGACGATGAGCCTGTT 59.104 47.619 0.00 0.00 0.00 3.16
336 337 2.094494 TCTCTTGACGATGAGCCTGTTC 60.094 50.000 0.00 0.00 0.00 3.18
337 338 1.066858 TCTTGACGATGAGCCTGTTCC 60.067 52.381 0.00 0.00 0.00 3.62
338 339 0.389817 TTGACGATGAGCCTGTTCCG 60.390 55.000 0.00 0.00 0.00 4.30
339 340 2.125512 ACGATGAGCCTGTTCCGC 60.126 61.111 0.00 0.00 0.00 5.54
340 341 2.892425 CGATGAGCCTGTTCCGCC 60.892 66.667 0.00 0.00 0.00 6.13
341 342 2.514824 GATGAGCCTGTTCCGCCC 60.515 66.667 0.00 0.00 0.00 6.13
342 343 4.473520 ATGAGCCTGTTCCGCCCG 62.474 66.667 0.00 0.00 0.00 6.13
373 374 4.675029 CCTCCCGGCGTTGAACGT 62.675 66.667 19.53 0.00 44.73 3.99
374 375 3.110178 CTCCCGGCGTTGAACGTC 61.110 66.667 19.53 16.40 44.73 4.34
375 376 3.569049 CTCCCGGCGTTGAACGTCT 62.569 63.158 20.42 0.00 45.21 4.18
376 377 3.411351 CCCGGCGTTGAACGTCTG 61.411 66.667 20.42 13.68 45.21 3.51
377 378 4.072088 CCGGCGTTGAACGTCTGC 62.072 66.667 20.42 2.49 45.21 4.26
378 379 4.072088 CGGCGTTGAACGTCTGCC 62.072 66.667 20.42 11.01 45.21 4.85
379 380 3.723348 GGCGTTGAACGTCTGCCC 61.723 66.667 19.53 7.55 43.82 5.36
380 381 2.665185 GCGTTGAACGTCTGCCCT 60.665 61.111 19.53 0.00 44.73 5.19
381 382 2.668280 GCGTTGAACGTCTGCCCTC 61.668 63.158 19.53 0.00 44.73 4.30
382 383 2.027625 CGTTGAACGTCTGCCCTCC 61.028 63.158 9.94 0.00 36.74 4.30
383 384 1.070786 GTTGAACGTCTGCCCTCCA 59.929 57.895 0.00 0.00 0.00 3.86
384 385 1.070786 TTGAACGTCTGCCCTCCAC 59.929 57.895 0.00 0.00 0.00 4.02
385 386 1.407656 TTGAACGTCTGCCCTCCACT 61.408 55.000 0.00 0.00 0.00 4.00
386 387 1.079750 GAACGTCTGCCCTCCACTC 60.080 63.158 0.00 0.00 0.00 3.51
387 388 2.820767 GAACGTCTGCCCTCCACTCG 62.821 65.000 0.00 0.00 0.00 4.18
388 389 4.135153 CGTCTGCCCTCCACTCGG 62.135 72.222 0.00 0.00 0.00 4.63
389 390 4.459089 GTCTGCCCTCCACTCGGC 62.459 72.222 0.00 0.00 45.92 5.54
394 395 4.760047 CCCTCCACTCGGCGTTGG 62.760 72.222 19.86 19.86 0.00 3.77
395 396 4.003788 CCTCCACTCGGCGTTGGT 62.004 66.667 23.21 12.09 0.00 3.67
396 397 2.432628 CTCCACTCGGCGTTGGTC 60.433 66.667 23.21 0.00 0.00 4.02
397 398 3.220999 CTCCACTCGGCGTTGGTCA 62.221 63.158 23.21 9.74 0.00 4.02
398 399 3.041940 CCACTCGGCGTTGGTCAC 61.042 66.667 18.30 0.00 0.00 3.67
416 417 4.778143 GCCCGACGGTCTTGCCAT 62.778 66.667 13.94 0.00 36.97 4.40
417 418 2.511600 CCCGACGGTCTTGCCATC 60.512 66.667 13.94 0.00 36.97 3.51
419 420 3.554692 CGACGGTCTTGCCATCGC 61.555 66.667 6.57 0.00 46.09 4.58
420 421 3.195698 GACGGTCTTGCCATCGCC 61.196 66.667 0.00 0.00 36.97 5.54
431 432 4.845580 CATCGCCGCCCTCAGCTT 62.846 66.667 0.00 0.00 40.39 3.74
432 433 4.537433 ATCGCCGCCCTCAGCTTC 62.537 66.667 0.00 0.00 40.39 3.86
435 436 4.847444 GCCGCCCTCAGCTTCCTC 62.847 72.222 0.00 0.00 40.39 3.71
436 437 3.080121 CCGCCCTCAGCTTCCTCT 61.080 66.667 0.00 0.00 40.39 3.69
437 438 2.186384 CGCCCTCAGCTTCCTCTG 59.814 66.667 0.00 0.00 40.39 3.35
438 439 2.124778 GCCCTCAGCTTCCTCTGC 60.125 66.667 0.00 0.00 38.99 4.26
439 440 2.668120 GCCCTCAGCTTCCTCTGCT 61.668 63.158 0.00 0.00 42.06 4.24
440 441 1.989620 CCCTCAGCTTCCTCTGCTT 59.010 57.895 0.00 0.00 38.92 3.91
441 442 0.107752 CCCTCAGCTTCCTCTGCTTC 60.108 60.000 0.00 0.00 38.92 3.86
442 443 0.459934 CCTCAGCTTCCTCTGCTTCG 60.460 60.000 0.00 0.00 38.92 3.79
443 444 0.459934 CTCAGCTTCCTCTGCTTCGG 60.460 60.000 0.00 0.00 38.92 4.30
444 445 1.188219 TCAGCTTCCTCTGCTTCGGT 61.188 55.000 0.00 0.00 38.92 4.69
445 446 0.321122 CAGCTTCCTCTGCTTCGGTT 60.321 55.000 0.00 0.00 38.92 4.44
446 447 0.321122 AGCTTCCTCTGCTTCGGTTG 60.321 55.000 0.00 0.00 37.52 3.77
447 448 1.301677 GCTTCCTCTGCTTCGGTTGG 61.302 60.000 0.00 0.00 0.00 3.77
448 449 0.674895 CTTCCTCTGCTTCGGTTGGG 60.675 60.000 0.00 0.00 0.00 4.12
449 450 1.415672 TTCCTCTGCTTCGGTTGGGT 61.416 55.000 0.00 0.00 0.00 4.51
450 451 1.672356 CCTCTGCTTCGGTTGGGTG 60.672 63.158 0.00 0.00 0.00 4.61
451 452 1.672356 CTCTGCTTCGGTTGGGTGG 60.672 63.158 0.00 0.00 0.00 4.61
452 453 3.365265 CTGCTTCGGTTGGGTGGC 61.365 66.667 0.00 0.00 0.00 5.01
453 454 4.196778 TGCTTCGGTTGGGTGGCA 62.197 61.111 0.00 0.00 0.00 4.92
454 455 2.676471 GCTTCGGTTGGGTGGCAT 60.676 61.111 0.00 0.00 0.00 4.40
455 456 2.700773 GCTTCGGTTGGGTGGCATC 61.701 63.158 0.00 0.00 0.00 3.91
456 457 2.359354 TTCGGTTGGGTGGCATCG 60.359 61.111 0.00 0.00 0.00 3.84
457 458 3.910914 TTCGGTTGGGTGGCATCGG 62.911 63.158 0.00 0.00 0.00 4.18
458 459 4.715523 CGGTTGGGTGGCATCGGT 62.716 66.667 0.00 0.00 0.00 4.69
459 460 3.061848 GGTTGGGTGGCATCGGTG 61.062 66.667 0.00 0.00 0.00 4.94
460 461 3.061848 GTTGGGTGGCATCGGTGG 61.062 66.667 0.00 0.00 0.00 4.61
482 483 4.849310 GGCGCGAGGGGCAACATA 62.849 66.667 12.10 0.00 43.41 2.29
483 484 2.591715 GCGCGAGGGGCAACATAT 60.592 61.111 12.10 0.00 43.84 1.78
484 485 2.186826 GCGCGAGGGGCAACATATT 61.187 57.895 12.10 0.00 43.84 1.28
485 486 1.724582 GCGCGAGGGGCAACATATTT 61.725 55.000 12.10 0.00 43.84 1.40
486 487 0.307760 CGCGAGGGGCAACATATTTC 59.692 55.000 0.00 0.00 43.84 2.17
487 488 1.680338 GCGAGGGGCAACATATTTCT 58.320 50.000 0.00 0.00 42.87 2.52
488 489 2.024414 GCGAGGGGCAACATATTTCTT 58.976 47.619 0.00 0.00 42.87 2.52
489 490 2.033424 GCGAGGGGCAACATATTTCTTC 59.967 50.000 0.00 0.00 42.87 2.87
490 491 3.278574 CGAGGGGCAACATATTTCTTCA 58.721 45.455 0.00 0.00 39.74 3.02
491 492 3.313526 CGAGGGGCAACATATTTCTTCAG 59.686 47.826 0.00 0.00 39.74 3.02
492 493 3.026694 AGGGGCAACATATTTCTTCAGC 58.973 45.455 0.00 0.00 39.74 4.26
493 494 2.223572 GGGGCAACATATTTCTTCAGCG 60.224 50.000 0.00 0.00 39.74 5.18
494 495 2.223572 GGGCAACATATTTCTTCAGCGG 60.224 50.000 0.00 0.00 39.74 5.52
495 496 2.454055 GCAACATATTTCTTCAGCGGC 58.546 47.619 0.00 0.00 0.00 6.53
496 497 2.159393 GCAACATATTTCTTCAGCGGCA 60.159 45.455 1.45 0.00 0.00 5.69
497 498 3.489738 GCAACATATTTCTTCAGCGGCAT 60.490 43.478 1.45 0.00 0.00 4.40
498 499 3.976793 ACATATTTCTTCAGCGGCATG 57.023 42.857 1.45 0.00 0.00 4.06
499 500 2.620115 ACATATTTCTTCAGCGGCATGG 59.380 45.455 1.45 0.00 0.00 3.66
500 501 1.024271 TATTTCTTCAGCGGCATGGC 58.976 50.000 9.69 9.69 0.00 4.40
501 502 1.996786 ATTTCTTCAGCGGCATGGCG 61.997 55.000 34.70 34.70 38.18 5.69
502 503 3.604129 TTCTTCAGCGGCATGGCGA 62.604 57.895 41.46 21.12 38.18 5.54
503 504 3.869272 CTTCAGCGGCATGGCGAC 61.869 66.667 41.46 30.79 38.18 5.19
504 505 4.393155 TTCAGCGGCATGGCGACT 62.393 61.111 41.46 32.30 38.18 4.18
509 510 4.457496 CGGCATGGCGACTGGTCT 62.457 66.667 35.61 0.00 0.00 3.85
510 511 2.821366 GGCATGGCGACTGGTCTG 60.821 66.667 2.41 0.00 0.00 3.51
511 512 2.265739 GCATGGCGACTGGTCTGA 59.734 61.111 0.00 0.00 0.00 3.27
512 513 1.153289 GCATGGCGACTGGTCTGAT 60.153 57.895 0.00 0.00 0.00 2.90
513 514 1.434622 GCATGGCGACTGGTCTGATG 61.435 60.000 0.00 0.00 0.00 3.07
514 515 0.176449 CATGGCGACTGGTCTGATGA 59.824 55.000 0.00 0.00 0.00 2.92
515 516 0.463204 ATGGCGACTGGTCTGATGAG 59.537 55.000 0.00 0.00 0.00 2.90
516 517 1.142748 GGCGACTGGTCTGATGAGG 59.857 63.158 0.00 0.00 0.00 3.86
517 518 1.323271 GGCGACTGGTCTGATGAGGA 61.323 60.000 0.00 0.00 0.00 3.71
518 519 0.102120 GCGACTGGTCTGATGAGGAG 59.898 60.000 0.00 0.00 0.00 3.69
519 520 1.756430 CGACTGGTCTGATGAGGAGA 58.244 55.000 0.00 0.00 0.00 3.71
520 521 2.095461 CGACTGGTCTGATGAGGAGAA 58.905 52.381 0.00 0.00 0.00 2.87
521 522 2.692557 CGACTGGTCTGATGAGGAGAAT 59.307 50.000 0.00 0.00 0.00 2.40
522 523 3.490590 CGACTGGTCTGATGAGGAGAATG 60.491 52.174 0.00 0.00 0.00 2.67
523 524 2.770802 ACTGGTCTGATGAGGAGAATGG 59.229 50.000 0.00 0.00 0.00 3.16
524 525 1.487976 TGGTCTGATGAGGAGAATGGC 59.512 52.381 0.00 0.00 0.00 4.40
525 526 1.539929 GGTCTGATGAGGAGAATGGCG 60.540 57.143 0.00 0.00 0.00 5.69
526 527 0.755079 TCTGATGAGGAGAATGGCGG 59.245 55.000 0.00 0.00 0.00 6.13
527 528 0.250209 CTGATGAGGAGAATGGCGGG 60.250 60.000 0.00 0.00 0.00 6.13
528 529 0.690744 TGATGAGGAGAATGGCGGGA 60.691 55.000 0.00 0.00 0.00 5.14
529 530 0.469917 GATGAGGAGAATGGCGGGAA 59.530 55.000 0.00 0.00 0.00 3.97
530 531 0.181350 ATGAGGAGAATGGCGGGAAC 59.819 55.000 0.00 0.00 0.00 3.62
542 543 3.387947 GGGAACGGCGGAGGAGAA 61.388 66.667 13.24 0.00 0.00 2.87
543 544 2.184579 GGAACGGCGGAGGAGAAG 59.815 66.667 13.24 0.00 0.00 2.85
544 545 2.184579 GAACGGCGGAGGAGAAGG 59.815 66.667 13.24 0.00 0.00 3.46
545 546 3.372554 GAACGGCGGAGGAGAAGGG 62.373 68.421 13.24 0.00 0.00 3.95
549 550 3.717294 GCGGAGGAGAAGGGGCAA 61.717 66.667 0.00 0.00 0.00 4.52
550 551 2.586792 CGGAGGAGAAGGGGCAAG 59.413 66.667 0.00 0.00 0.00 4.01
551 552 2.273776 GGAGGAGAAGGGGCAAGC 59.726 66.667 0.00 0.00 0.00 4.01
552 553 2.606587 GGAGGAGAAGGGGCAAGCA 61.607 63.158 0.00 0.00 0.00 3.91
553 554 1.380302 GAGGAGAAGGGGCAAGCAA 59.620 57.895 0.00 0.00 0.00 3.91
554 555 0.033699 GAGGAGAAGGGGCAAGCAAT 60.034 55.000 0.00 0.00 0.00 3.56
555 556 0.411058 AGGAGAAGGGGCAAGCAATT 59.589 50.000 0.00 0.00 0.00 2.32
556 557 0.533951 GGAGAAGGGGCAAGCAATTG 59.466 55.000 0.00 0.00 0.00 2.32
557 558 0.533951 GAGAAGGGGCAAGCAATTGG 59.466 55.000 7.72 0.00 0.00 3.16
558 559 0.906282 AGAAGGGGCAAGCAATTGGG 60.906 55.000 7.72 0.00 0.00 4.12
559 560 0.904394 GAAGGGGCAAGCAATTGGGA 60.904 55.000 7.72 0.00 0.00 4.37
560 561 0.906282 AAGGGGCAAGCAATTGGGAG 60.906 55.000 7.72 0.00 0.00 4.30
561 562 2.361567 GGGGCAAGCAATTGGGAGG 61.362 63.158 7.72 0.00 0.00 4.30
562 563 1.305213 GGGCAAGCAATTGGGAGGA 60.305 57.895 7.72 0.00 0.00 3.71
563 564 0.904394 GGGCAAGCAATTGGGAGGAA 60.904 55.000 7.72 0.00 0.00 3.36
564 565 0.975887 GGCAAGCAATTGGGAGGAAA 59.024 50.000 7.72 0.00 0.00 3.13
565 566 1.556451 GGCAAGCAATTGGGAGGAAAT 59.444 47.619 7.72 0.00 0.00 2.17
566 567 2.624636 GCAAGCAATTGGGAGGAAATG 58.375 47.619 7.72 0.00 0.00 2.32
567 568 2.678769 GCAAGCAATTGGGAGGAAATGG 60.679 50.000 7.72 0.00 0.00 3.16
568 569 2.833338 CAAGCAATTGGGAGGAAATGGA 59.167 45.455 7.72 0.00 0.00 3.41
569 570 2.743553 AGCAATTGGGAGGAAATGGAG 58.256 47.619 7.72 0.00 0.00 3.86
570 571 1.758862 GCAATTGGGAGGAAATGGAGG 59.241 52.381 7.72 0.00 0.00 4.30
571 572 2.391678 CAATTGGGAGGAAATGGAGGG 58.608 52.381 0.00 0.00 0.00 4.30
572 573 0.936691 ATTGGGAGGAAATGGAGGGG 59.063 55.000 0.00 0.00 0.00 4.79
573 574 0.178816 TTGGGAGGAAATGGAGGGGA 60.179 55.000 0.00 0.00 0.00 4.81
574 575 0.178816 TGGGAGGAAATGGAGGGGAA 60.179 55.000 0.00 0.00 0.00 3.97
575 576 0.553333 GGGAGGAAATGGAGGGGAAG 59.447 60.000 0.00 0.00 0.00 3.46
576 577 0.553333 GGAGGAAATGGAGGGGAAGG 59.447 60.000 0.00 0.00 0.00 3.46
577 578 1.596496 GAGGAAATGGAGGGGAAGGA 58.404 55.000 0.00 0.00 0.00 3.36
578 579 2.139382 GAGGAAATGGAGGGGAAGGAT 58.861 52.381 0.00 0.00 0.00 3.24
579 580 1.855599 AGGAAATGGAGGGGAAGGATG 59.144 52.381 0.00 0.00 0.00 3.51
580 581 1.133356 GGAAATGGAGGGGAAGGATGG 60.133 57.143 0.00 0.00 0.00 3.51
581 582 0.936691 AAATGGAGGGGAAGGATGGG 59.063 55.000 0.00 0.00 0.00 4.00
582 583 1.659035 AATGGAGGGGAAGGATGGGC 61.659 60.000 0.00 0.00 0.00 5.36
583 584 2.696125 GGAGGGGAAGGATGGGCA 60.696 66.667 0.00 0.00 0.00 5.36
584 585 2.316586 GGAGGGGAAGGATGGGCAA 61.317 63.158 0.00 0.00 0.00 4.52
585 586 1.697297 GAGGGGAAGGATGGGCAAA 59.303 57.895 0.00 0.00 0.00 3.68
586 587 0.041090 GAGGGGAAGGATGGGCAAAA 59.959 55.000 0.00 0.00 0.00 2.44
587 588 0.252239 AGGGGAAGGATGGGCAAAAC 60.252 55.000 0.00 0.00 0.00 2.43
588 589 1.604147 GGGGAAGGATGGGCAAAACG 61.604 60.000 0.00 0.00 0.00 3.60
589 590 0.610785 GGGAAGGATGGGCAAAACGA 60.611 55.000 0.00 0.00 0.00 3.85
590 591 0.526211 GGAAGGATGGGCAAAACGAC 59.474 55.000 0.00 0.00 0.00 4.34
591 592 1.243902 GAAGGATGGGCAAAACGACA 58.756 50.000 0.00 0.00 0.00 4.35
592 593 1.200020 GAAGGATGGGCAAAACGACAG 59.800 52.381 0.00 0.00 0.00 3.51
593 594 0.609131 AGGATGGGCAAAACGACAGG 60.609 55.000 0.00 0.00 0.00 4.00
594 595 0.608035 GGATGGGCAAAACGACAGGA 60.608 55.000 0.00 0.00 0.00 3.86
595 596 1.243902 GATGGGCAAAACGACAGGAA 58.756 50.000 0.00 0.00 0.00 3.36
596 597 1.818674 GATGGGCAAAACGACAGGAAT 59.181 47.619 0.00 0.00 0.00 3.01
597 598 2.570415 TGGGCAAAACGACAGGAATA 57.430 45.000 0.00 0.00 0.00 1.75
598 599 3.080300 TGGGCAAAACGACAGGAATAT 57.920 42.857 0.00 0.00 0.00 1.28
599 600 2.752354 TGGGCAAAACGACAGGAATATG 59.248 45.455 0.00 0.00 0.00 1.78
600 601 2.479560 GGGCAAAACGACAGGAATATGC 60.480 50.000 0.00 0.00 0.00 3.14
601 602 2.479560 GGCAAAACGACAGGAATATGCC 60.480 50.000 0.00 0.00 44.44 4.40
602 603 2.423538 GCAAAACGACAGGAATATGCCT 59.576 45.455 0.00 0.00 39.37 4.75
610 611 1.204146 AGGAATATGCCTGGTGTCGT 58.796 50.000 0.00 0.00 36.76 4.34
611 612 2.394632 AGGAATATGCCTGGTGTCGTA 58.605 47.619 0.00 0.00 36.76 3.43
612 613 2.365617 AGGAATATGCCTGGTGTCGTAG 59.634 50.000 0.00 0.00 36.76 3.51
613 614 2.364324 GGAATATGCCTGGTGTCGTAGA 59.636 50.000 0.00 0.00 0.00 2.59
614 615 3.006967 GGAATATGCCTGGTGTCGTAGAT 59.993 47.826 0.00 0.00 40.67 1.98
615 616 4.219944 GGAATATGCCTGGTGTCGTAGATA 59.780 45.833 0.00 0.00 40.67 1.98
616 617 5.392767 AATATGCCTGGTGTCGTAGATAG 57.607 43.478 0.00 0.00 40.67 2.08
617 618 0.744874 TGCCTGGTGTCGTAGATAGC 59.255 55.000 0.00 0.00 46.23 2.97
622 623 1.823828 GGTGTCGTAGATAGCACGTG 58.176 55.000 12.28 12.28 45.38 4.49
623 624 1.189403 GTGTCGTAGATAGCACGTGC 58.811 55.000 32.79 32.79 40.67 5.34
624 625 0.099968 TGTCGTAGATAGCACGTGCC 59.900 55.000 35.51 21.13 40.14 5.01
625 626 0.594284 GTCGTAGATAGCACGTGCCC 60.594 60.000 35.51 24.16 40.14 5.36
626 627 1.033202 TCGTAGATAGCACGTGCCCA 61.033 55.000 35.51 24.50 43.38 5.36
627 628 0.870307 CGTAGATAGCACGTGCCCAC 60.870 60.000 35.51 24.94 43.38 4.61
637 638 4.279043 GTGCCCACGCGCCTTTTT 62.279 61.111 5.73 0.00 39.73 1.94
638 639 4.277593 TGCCCACGCGCCTTTTTG 62.278 61.111 5.73 0.00 38.08 2.44
639 640 4.279043 GCCCACGCGCCTTTTTGT 62.279 61.111 5.73 0.00 0.00 2.83
640 641 2.415426 CCCACGCGCCTTTTTGTT 59.585 55.556 5.73 0.00 0.00 2.83
641 642 1.660264 CCCACGCGCCTTTTTGTTC 60.660 57.895 5.73 0.00 0.00 3.18
642 643 2.008697 CCACGCGCCTTTTTGTTCG 61.009 57.895 5.73 0.00 0.00 3.95
643 644 2.008697 CACGCGCCTTTTTGTTCGG 61.009 57.895 5.73 0.00 0.00 4.30
644 645 2.428403 CGCGCCTTTTTGTTCGGG 60.428 61.111 0.00 0.00 0.00 5.14
645 646 2.725641 GCGCCTTTTTGTTCGGGT 59.274 55.556 0.00 0.00 0.00 5.28
646 647 1.371267 GCGCCTTTTTGTTCGGGTC 60.371 57.895 0.00 0.00 0.00 4.46
647 648 1.792118 GCGCCTTTTTGTTCGGGTCT 61.792 55.000 0.00 0.00 0.00 3.85
648 649 0.237498 CGCCTTTTTGTTCGGGTCTC 59.763 55.000 0.00 0.00 0.00 3.36
649 650 0.237498 GCCTTTTTGTTCGGGTCTCG 59.763 55.000 0.00 0.00 40.90 4.04
650 651 0.872388 CCTTTTTGTTCGGGTCTCGG 59.128 55.000 0.00 0.00 39.77 4.63
651 652 1.541670 CCTTTTTGTTCGGGTCTCGGA 60.542 52.381 0.00 0.00 39.77 4.55
652 653 2.423577 CTTTTTGTTCGGGTCTCGGAT 58.576 47.619 0.00 0.00 39.77 4.18
653 654 2.554370 TTTTGTTCGGGTCTCGGATT 57.446 45.000 0.00 0.00 39.77 3.01
654 655 2.088950 TTTGTTCGGGTCTCGGATTC 57.911 50.000 0.00 0.00 39.77 2.52
655 656 0.108992 TTGTTCGGGTCTCGGATTCG 60.109 55.000 0.00 0.00 39.77 3.34
656 657 1.877165 GTTCGGGTCTCGGATTCGC 60.877 63.158 0.00 0.00 39.77 4.70
657 658 2.050350 TTCGGGTCTCGGATTCGCT 61.050 57.895 0.00 0.00 39.77 4.93
658 659 2.278857 CGGGTCTCGGATTCGCTG 60.279 66.667 0.00 0.00 36.13 5.18
659 660 2.107141 GGGTCTCGGATTCGCTGG 59.893 66.667 0.00 0.00 36.13 4.85
660 661 2.722201 GGGTCTCGGATTCGCTGGT 61.722 63.158 0.00 0.00 36.13 4.00
661 662 1.218316 GGTCTCGGATTCGCTGGTT 59.782 57.895 0.00 0.00 36.13 3.67
662 663 1.084370 GGTCTCGGATTCGCTGGTTG 61.084 60.000 0.00 0.00 36.13 3.77
663 664 0.389948 GTCTCGGATTCGCTGGTTGT 60.390 55.000 0.00 0.00 36.13 3.32
664 665 0.320374 TCTCGGATTCGCTGGTTGTT 59.680 50.000 0.00 0.00 36.13 2.83
665 666 1.546923 TCTCGGATTCGCTGGTTGTTA 59.453 47.619 0.00 0.00 36.13 2.41
666 667 2.167693 TCTCGGATTCGCTGGTTGTTAT 59.832 45.455 0.00 0.00 36.13 1.89
667 668 2.936498 CTCGGATTCGCTGGTTGTTATT 59.064 45.455 0.00 0.00 36.13 1.40
668 669 3.340034 TCGGATTCGCTGGTTGTTATTT 58.660 40.909 0.00 0.00 36.13 1.40
669 670 3.126171 TCGGATTCGCTGGTTGTTATTTG 59.874 43.478 0.00 0.00 36.13 2.32
670 671 3.730662 CGGATTCGCTGGTTGTTATTTGG 60.731 47.826 0.00 0.00 0.00 3.28
671 672 3.428862 GGATTCGCTGGTTGTTATTTGGG 60.429 47.826 0.00 0.00 0.00 4.12
672 673 0.885196 TCGCTGGTTGTTATTTGGGC 59.115 50.000 0.00 0.00 0.00 5.36
673 674 0.108851 CGCTGGTTGTTATTTGGGCC 60.109 55.000 0.00 0.00 0.00 5.80
674 675 0.249120 GCTGGTTGTTATTTGGGCCC 59.751 55.000 17.59 17.59 0.00 5.80
675 676 1.638529 CTGGTTGTTATTTGGGCCCA 58.361 50.000 24.45 24.45 0.00 5.36
676 677 1.974236 CTGGTTGTTATTTGGGCCCAA 59.026 47.619 34.07 34.07 0.00 4.12
678 679 2.104963 TGGTTGTTATTTGGGCCCAAAC 59.895 45.455 44.79 34.50 46.80 2.93
679 680 2.551287 GGTTGTTATTTGGGCCCAAACC 60.551 50.000 44.79 36.55 46.80 3.27
680 681 2.103153 TGTTATTTGGGCCCAAACCA 57.897 45.000 44.79 35.84 46.80 3.67
681 682 2.408565 TGTTATTTGGGCCCAAACCAA 58.591 42.857 44.79 36.27 46.80 3.67
682 683 2.104963 TGTTATTTGGGCCCAAACCAAC 59.895 45.455 39.65 39.65 46.94 3.77
683 684 0.969894 TATTTGGGCCCAAACCAACG 59.030 50.000 44.79 0.00 46.94 4.10
684 685 0.760945 ATTTGGGCCCAAACCAACGA 60.761 50.000 44.79 26.58 46.94 3.85
685 686 0.760945 TTTGGGCCCAAACCAACGAT 60.761 50.000 40.46 0.00 46.94 3.73
686 687 1.182385 TTGGGCCCAAACCAACGATC 61.182 55.000 35.47 0.00 42.75 3.69
687 688 2.696759 GGGCCCAAACCAACGATCG 61.697 63.158 19.95 14.88 0.00 3.69
688 689 1.673009 GGCCCAAACCAACGATCGA 60.673 57.895 24.34 0.00 0.00 3.59
689 690 1.500396 GCCCAAACCAACGATCGAC 59.500 57.895 24.34 0.00 0.00 4.20
690 691 0.953960 GCCCAAACCAACGATCGACT 60.954 55.000 24.34 5.28 0.00 4.18
691 692 0.796312 CCCAAACCAACGATCGACTG 59.204 55.000 24.34 17.46 0.00 3.51
692 693 1.606994 CCCAAACCAACGATCGACTGA 60.607 52.381 24.34 0.00 0.00 3.41
693 694 2.139917 CCAAACCAACGATCGACTGAA 58.860 47.619 24.34 0.00 0.00 3.02
694 695 2.546368 CCAAACCAACGATCGACTGAAA 59.454 45.455 24.34 0.00 0.00 2.69
695 696 3.002862 CCAAACCAACGATCGACTGAAAA 59.997 43.478 24.34 0.00 0.00 2.29
696 697 4.211389 CAAACCAACGATCGACTGAAAAG 58.789 43.478 24.34 8.02 0.00 2.27
697 698 2.413837 ACCAACGATCGACTGAAAAGG 58.586 47.619 24.34 12.65 0.00 3.11
698 699 1.128692 CCAACGATCGACTGAAAAGGC 59.871 52.381 24.34 0.00 0.00 4.35
699 700 1.798223 CAACGATCGACTGAAAAGGCA 59.202 47.619 24.34 0.00 0.00 4.75
700 701 1.429463 ACGATCGACTGAAAAGGCAC 58.571 50.000 24.34 0.00 0.00 5.01
701 702 0.721718 CGATCGACTGAAAAGGCACC 59.278 55.000 10.26 0.00 0.00 5.01
702 703 1.087501 GATCGACTGAAAAGGCACCC 58.912 55.000 0.00 0.00 0.00 4.61
703 704 0.693049 ATCGACTGAAAAGGCACCCT 59.307 50.000 0.00 0.00 33.87 4.34
704 705 0.250295 TCGACTGAAAAGGCACCCTG 60.250 55.000 0.00 0.00 32.13 4.45
705 706 1.237285 CGACTGAAAAGGCACCCTGG 61.237 60.000 0.00 0.00 32.13 4.45
706 707 0.178990 GACTGAAAAGGCACCCTGGT 60.179 55.000 0.00 0.00 32.13 4.00
708 709 1.152567 TGAAAAGGCACCCTGGTGG 60.153 57.895 17.59 0.45 45.49 4.61
757 758 4.259952 GGGGGAATGCTGTTAGCC 57.740 61.111 0.00 0.00 41.51 3.93
758 759 1.615262 GGGGGAATGCTGTTAGCCT 59.385 57.895 0.00 0.00 41.51 4.58
759 760 0.843984 GGGGGAATGCTGTTAGCCTA 59.156 55.000 0.00 0.00 41.51 3.93
760 761 1.214424 GGGGGAATGCTGTTAGCCTAA 59.786 52.381 0.00 0.00 41.51 2.69
761 762 2.298610 GGGGAATGCTGTTAGCCTAAC 58.701 52.381 7.68 7.68 41.51 2.34
762 763 2.356741 GGGGAATGCTGTTAGCCTAACA 60.357 50.000 16.06 16.06 45.66 2.41
763 764 3.555966 GGGAATGCTGTTAGCCTAACAT 58.444 45.455 17.16 3.04 46.51 2.71
764 765 4.445735 GGGGAATGCTGTTAGCCTAACATA 60.446 45.833 17.16 10.29 46.51 2.29
765 766 4.515567 GGGAATGCTGTTAGCCTAACATAC 59.484 45.833 17.16 12.88 46.51 2.39
766 767 5.368989 GGAATGCTGTTAGCCTAACATACT 58.631 41.667 17.16 0.69 46.51 2.12
767 768 5.237344 GGAATGCTGTTAGCCTAACATACTG 59.763 44.000 17.16 7.38 46.51 2.74
768 769 4.819105 TGCTGTTAGCCTAACATACTGT 57.181 40.909 17.16 0.00 46.51 3.55
769 770 4.503910 TGCTGTTAGCCTAACATACTGTG 58.496 43.478 17.16 6.37 46.51 3.66
770 771 4.020573 TGCTGTTAGCCTAACATACTGTGT 60.021 41.667 17.16 0.00 46.51 3.72
771 772 5.186215 TGCTGTTAGCCTAACATACTGTGTA 59.814 40.000 17.16 2.35 46.51 2.90
772 773 6.103997 GCTGTTAGCCTAACATACTGTGTAA 58.896 40.000 17.16 0.00 46.51 2.41
773 774 6.761714 GCTGTTAGCCTAACATACTGTGTAAT 59.238 38.462 17.16 0.00 46.51 1.89
774 775 7.924412 GCTGTTAGCCTAACATACTGTGTAATA 59.076 37.037 17.16 0.00 46.51 0.98
775 776 9.811995 CTGTTAGCCTAACATACTGTGTAATAA 57.188 33.333 17.16 0.00 46.51 1.40
814 815 1.002366 CATTTCGCACTTCTCCCTCG 58.998 55.000 0.00 0.00 0.00 4.63
815 816 0.108138 ATTTCGCACTTCTCCCTCGG 60.108 55.000 0.00 0.00 0.00 4.63
856 857 4.325344 CCTTCACCCCCATCTTCACTAATT 60.325 45.833 0.00 0.00 0.00 1.40
1237 1244 2.125350 CTTCGCCTGAGGTCCTGC 60.125 66.667 0.00 0.00 0.00 4.85
1662 1669 2.932234 CGACCGAGACCTGTGGCTT 61.932 63.158 0.00 0.00 0.00 4.35
1746 1753 2.549926 CGCATGGAGTTATGTGTGCTA 58.450 47.619 0.00 0.00 34.65 3.49
1947 1954 0.832135 TCGACCAGAAGCTTGAGGGT 60.832 55.000 2.10 8.47 33.78 4.34
1968 1975 1.153568 CAATCTTGCCCTCGAGCGA 60.154 57.895 6.99 0.00 34.65 4.93
2007 2014 2.094442 TGAGATTCGTGTAATCCGTGCA 60.094 45.455 0.00 0.00 44.44 4.57
2169 2176 5.560724 CCCATGGGATCTGTAAATTATCGT 58.439 41.667 28.27 0.00 37.50 3.73
2253 2260 3.760580 ATTTCCATGGGTCGAGAGATC 57.239 47.619 13.02 0.00 45.19 2.75
2260 2267 0.465705 GGGTCGAGAGATCATGCCAA 59.534 55.000 0.00 0.00 45.13 4.52
2555 2562 4.383226 GGTTAGTCAGAAGGGGCTTAAGAG 60.383 50.000 6.67 0.00 0.00 2.85
2811 2818 3.728845 TGCCACTACAGACTTGAACTTC 58.271 45.455 0.00 0.00 0.00 3.01
3054 3061 4.895297 ACTGGAAGGCAAATTCTTCTTTCA 59.105 37.500 5.61 1.91 40.17 2.69
3105 3112 1.000019 TCTTGGGGATCGTCGAGGT 60.000 57.895 4.85 0.00 0.00 3.85
3194 3201 8.417106 TGAGCTTTACATGGTTGTATTTCAAAA 58.583 29.630 0.00 0.00 38.12 2.44
3195 3202 8.816640 AGCTTTACATGGTTGTATTTCAAAAG 57.183 30.769 0.00 0.00 38.12 2.27
3196 3203 8.421002 AGCTTTACATGGTTGTATTTCAAAAGT 58.579 29.630 0.00 0.00 38.12 2.66
3197 3204 8.699749 GCTTTACATGGTTGTATTTCAAAAGTC 58.300 33.333 0.00 0.00 38.12 3.01
3198 3205 8.789881 TTTACATGGTTGTATTTCAAAAGTCG 57.210 30.769 0.00 0.00 38.12 4.18
3273 3282 7.840931 ACCTGTTTGATTTTCTCTGTTTCTTT 58.159 30.769 0.00 0.00 0.00 2.52
3316 3325 2.952310 GCTCCCACCAAGGATCATAAAC 59.048 50.000 0.00 0.00 41.22 2.01
3351 3360 7.972277 TGTGTTATTTCTAGAATCACGAGGTAC 59.028 37.037 5.89 0.00 0.00 3.34
3574 3583 2.731572 CCATGGTTCCTTGAGCAAGAT 58.268 47.619 11.61 0.00 40.79 2.40
3740 3751 7.231115 TGTTGGGACACCTAAATTAACCTTTAC 59.769 37.037 0.00 0.00 39.29 2.01
3741 3752 7.093965 TGGGACACCTAAATTAACCTTTACT 57.906 36.000 0.00 0.00 37.76 2.24
3742 3753 8.217188 TGGGACACCTAAATTAACCTTTACTA 57.783 34.615 0.00 0.00 37.76 1.82
3743 3754 8.323567 TGGGACACCTAAATTAACCTTTACTAG 58.676 37.037 0.00 0.00 37.76 2.57
3744 3755 8.324306 GGGACACCTAAATTAACCTTTACTAGT 58.676 37.037 0.00 0.00 0.00 2.57
3753 3764 8.975663 AATTAACCTTTACTAGTAGAATGCCC 57.024 34.615 3.59 0.00 0.00 5.36
3754 3765 4.667519 ACCTTTACTAGTAGAATGCCCG 57.332 45.455 3.59 0.00 0.00 6.13
3755 3766 4.028825 ACCTTTACTAGTAGAATGCCCGT 58.971 43.478 3.59 0.00 0.00 5.28
3756 3767 4.142004 ACCTTTACTAGTAGAATGCCCGTG 60.142 45.833 3.59 0.00 0.00 4.94
3757 3768 3.447918 TTACTAGTAGAATGCCCGTGC 57.552 47.619 3.59 0.00 38.26 5.34
3802 3813 7.891183 ATTATTAAGATGGTATCGACACAGC 57.109 36.000 0.00 0.00 0.00 4.40
3803 3814 5.537300 ATTAAGATGGTATCGACACAGCT 57.463 39.130 0.00 0.00 31.32 4.24
3804 3815 6.650427 ATTAAGATGGTATCGACACAGCTA 57.350 37.500 0.00 0.00 29.69 3.32
3805 3816 6.459670 TTAAGATGGTATCGACACAGCTAA 57.540 37.500 0.00 0.00 29.69 3.09
3806 3817 5.339008 AAGATGGTATCGACACAGCTAAA 57.661 39.130 0.00 0.00 29.69 1.85
3807 3818 5.339008 AGATGGTATCGACACAGCTAAAA 57.661 39.130 0.00 0.00 0.00 1.52
3808 3819 5.918608 AGATGGTATCGACACAGCTAAAAT 58.081 37.500 0.00 0.00 0.00 1.82
3809 3820 7.050970 AGATGGTATCGACACAGCTAAAATA 57.949 36.000 0.00 0.00 0.00 1.40
3810 3821 7.497595 AGATGGTATCGACACAGCTAAAATAA 58.502 34.615 0.00 0.00 0.00 1.40
3811 3822 6.897259 TGGTATCGACACAGCTAAAATAAC 57.103 37.500 0.00 0.00 0.00 1.89
3812 3823 5.813672 TGGTATCGACACAGCTAAAATAACC 59.186 40.000 0.00 0.00 0.00 2.85
3813 3824 5.051240 GGTATCGACACAGCTAAAATAACCG 60.051 44.000 0.00 0.00 0.00 4.44
3814 3825 4.177165 TCGACACAGCTAAAATAACCGA 57.823 40.909 0.00 0.00 0.00 4.69
3815 3826 4.171005 TCGACACAGCTAAAATAACCGAG 58.829 43.478 0.00 0.00 0.00 4.63
3816 3827 4.082625 TCGACACAGCTAAAATAACCGAGA 60.083 41.667 0.00 0.00 0.00 4.04
3817 3828 4.624024 CGACACAGCTAAAATAACCGAGAA 59.376 41.667 0.00 0.00 0.00 2.87
3818 3829 5.220228 CGACACAGCTAAAATAACCGAGAAG 60.220 44.000 0.00 0.00 0.00 2.85
3819 3830 5.790593 ACACAGCTAAAATAACCGAGAAGA 58.209 37.500 0.00 0.00 0.00 2.87
3820 3831 6.228258 ACACAGCTAAAATAACCGAGAAGAA 58.772 36.000 0.00 0.00 0.00 2.52
3821 3832 6.879458 ACACAGCTAAAATAACCGAGAAGAAT 59.121 34.615 0.00 0.00 0.00 2.40
3822 3833 7.148407 ACACAGCTAAAATAACCGAGAAGAATG 60.148 37.037 0.00 0.00 0.00 2.67
3823 3834 6.183360 ACAGCTAAAATAACCGAGAAGAATGC 60.183 38.462 0.00 0.00 0.00 3.56
3824 3835 5.880332 AGCTAAAATAACCGAGAAGAATGCA 59.120 36.000 0.00 0.00 0.00 3.96
3825 3836 5.965918 GCTAAAATAACCGAGAAGAATGCAC 59.034 40.000 0.00 0.00 0.00 4.57
3826 3837 5.957842 AAAATAACCGAGAAGAATGCACA 57.042 34.783 0.00 0.00 0.00 4.57
3827 3838 6.515272 AAAATAACCGAGAAGAATGCACAT 57.485 33.333 0.00 0.00 0.00 3.21
3828 3839 5.741388 AATAACCGAGAAGAATGCACATC 57.259 39.130 0.00 0.00 0.00 3.06
3829 3840 3.340814 AACCGAGAAGAATGCACATCT 57.659 42.857 0.00 0.00 0.00 2.90
3830 3841 2.898705 ACCGAGAAGAATGCACATCTC 58.101 47.619 4.44 6.98 35.95 2.75
3831 3842 2.234661 ACCGAGAAGAATGCACATCTCA 59.765 45.455 15.79 0.00 38.55 3.27
3832 3843 2.864946 CCGAGAAGAATGCACATCTCAG 59.135 50.000 15.79 10.34 38.55 3.35
3833 3844 2.284684 CGAGAAGAATGCACATCTCAGC 59.715 50.000 15.79 5.99 38.55 4.26
3834 3845 3.533547 GAGAAGAATGCACATCTCAGCT 58.466 45.455 12.47 7.58 38.51 4.24
3835 3846 4.691175 GAGAAGAATGCACATCTCAGCTA 58.309 43.478 12.47 0.00 38.51 3.32
3836 3847 5.095145 AGAAGAATGCACATCTCAGCTAA 57.905 39.130 4.44 0.00 0.00 3.09
3837 3848 4.874966 AGAAGAATGCACATCTCAGCTAAC 59.125 41.667 4.44 0.00 0.00 2.34
3838 3849 4.212143 AGAATGCACATCTCAGCTAACA 57.788 40.909 0.00 0.00 0.00 2.41
3839 3850 3.937706 AGAATGCACATCTCAGCTAACAC 59.062 43.478 0.00 0.00 0.00 3.32
3840 3851 2.837532 TGCACATCTCAGCTAACACA 57.162 45.000 0.00 0.00 0.00 3.72
3841 3852 2.416747 TGCACATCTCAGCTAACACAC 58.583 47.619 0.00 0.00 0.00 3.82
3842 3853 2.224257 TGCACATCTCAGCTAACACACA 60.224 45.455 0.00 0.00 0.00 3.72
3843 3854 3.005554 GCACATCTCAGCTAACACACAT 58.994 45.455 0.00 0.00 0.00 3.21
3844 3855 3.063180 GCACATCTCAGCTAACACACATC 59.937 47.826 0.00 0.00 0.00 3.06
3845 3856 4.248058 CACATCTCAGCTAACACACATCA 58.752 43.478 0.00 0.00 0.00 3.07
3846 3857 4.874396 CACATCTCAGCTAACACACATCAT 59.126 41.667 0.00 0.00 0.00 2.45
3847 3858 6.044682 CACATCTCAGCTAACACACATCATA 58.955 40.000 0.00 0.00 0.00 2.15
3848 3859 6.019237 CACATCTCAGCTAACACACATCATAC 60.019 42.308 0.00 0.00 0.00 2.39
3849 3860 5.921962 TCTCAGCTAACACACATCATACT 57.078 39.130 0.00 0.00 0.00 2.12
3850 3861 7.068716 ACATCTCAGCTAACACACATCATACTA 59.931 37.037 0.00 0.00 0.00 1.82
3851 3862 7.588497 TCTCAGCTAACACACATCATACTAT 57.412 36.000 0.00 0.00 0.00 2.12
3852 3863 7.652727 TCTCAGCTAACACACATCATACTATC 58.347 38.462 0.00 0.00 0.00 2.08
3853 3864 6.438763 TCAGCTAACACACATCATACTATCG 58.561 40.000 0.00 0.00 0.00 2.92
3854 3865 6.262273 TCAGCTAACACACATCATACTATCGA 59.738 38.462 0.00 0.00 0.00 3.59
3855 3866 6.918022 CAGCTAACACACATCATACTATCGAA 59.082 38.462 0.00 0.00 0.00 3.71
3856 3867 6.918569 AGCTAACACACATCATACTATCGAAC 59.081 38.462 0.00 0.00 0.00 3.95
3857 3868 6.695713 GCTAACACACATCATACTATCGAACA 59.304 38.462 0.00 0.00 0.00 3.18
3858 3869 6.887376 AACACACATCATACTATCGAACAC 57.113 37.500 0.00 0.00 0.00 3.32
3859 3870 5.961272 ACACACATCATACTATCGAACACA 58.039 37.500 0.00 0.00 0.00 3.72
3860 3871 6.394809 ACACACATCATACTATCGAACACAA 58.605 36.000 0.00 0.00 0.00 3.33
3861 3872 7.041721 ACACACATCATACTATCGAACACAAT 58.958 34.615 0.00 0.00 0.00 2.71
3862 3873 8.194769 ACACACATCATACTATCGAACACAATA 58.805 33.333 0.00 0.00 0.00 1.90
3863 3874 9.030301 CACACATCATACTATCGAACACAATAA 57.970 33.333 0.00 0.00 0.00 1.40
3864 3875 9.764363 ACACATCATACTATCGAACACAATAAT 57.236 29.630 0.00 0.00 0.00 1.28
3955 3966 5.422214 ACCAGTAGTTGAATGGTTAGGAG 57.578 43.478 0.00 0.00 44.98 3.69
3956 3967 4.225267 ACCAGTAGTTGAATGGTTAGGAGG 59.775 45.833 0.00 0.00 44.98 4.30
3957 3968 4.384208 CCAGTAGTTGAATGGTTAGGAGGG 60.384 50.000 0.00 0.00 0.00 4.30
3958 3969 4.225267 CAGTAGTTGAATGGTTAGGAGGGT 59.775 45.833 0.00 0.00 0.00 4.34
3959 3970 4.850386 AGTAGTTGAATGGTTAGGAGGGTT 59.150 41.667 0.00 0.00 0.00 4.11
3960 3971 4.034285 AGTTGAATGGTTAGGAGGGTTG 57.966 45.455 0.00 0.00 0.00 3.77
3961 3972 3.397955 AGTTGAATGGTTAGGAGGGTTGT 59.602 43.478 0.00 0.00 0.00 3.32
3962 3973 3.433306 TGAATGGTTAGGAGGGTTGTG 57.567 47.619 0.00 0.00 0.00 3.33
3963 3974 2.041081 TGAATGGTTAGGAGGGTTGTGG 59.959 50.000 0.00 0.00 0.00 4.17
3964 3975 1.755200 ATGGTTAGGAGGGTTGTGGT 58.245 50.000 0.00 0.00 0.00 4.16
3965 3976 2.419457 TGGTTAGGAGGGTTGTGGTA 57.581 50.000 0.00 0.00 0.00 3.25
3966 3977 1.980036 TGGTTAGGAGGGTTGTGGTAC 59.020 52.381 0.00 0.00 0.00 3.34
3967 3978 1.280133 GGTTAGGAGGGTTGTGGTACC 59.720 57.143 4.43 4.43 37.47 3.34
3975 3986 1.762708 GGTTGTGGTACCCATCCATG 58.237 55.000 10.07 0.00 35.28 3.66
3976 3987 1.005450 GGTTGTGGTACCCATCCATGT 59.995 52.381 10.07 0.00 35.28 3.21
3977 3988 2.091541 GTTGTGGTACCCATCCATGTG 58.908 52.381 10.07 0.00 35.28 3.21
3978 3989 1.367346 TGTGGTACCCATCCATGTGT 58.633 50.000 10.07 0.00 35.28 3.72
3979 3990 1.004161 TGTGGTACCCATCCATGTGTG 59.996 52.381 10.07 0.00 35.28 3.82
3980 3991 1.280710 GTGGTACCCATCCATGTGTGA 59.719 52.381 10.07 0.00 35.28 3.58
3981 3992 1.559219 TGGTACCCATCCATGTGTGAG 59.441 52.381 10.07 0.00 0.00 3.51
3982 3993 1.559682 GGTACCCATCCATGTGTGAGT 59.440 52.381 0.00 0.00 0.00 3.41
3983 3994 2.632377 GTACCCATCCATGTGTGAGTG 58.368 52.381 0.00 0.00 0.00 3.51
3984 3995 0.322816 ACCCATCCATGTGTGAGTGC 60.323 55.000 0.00 0.00 0.00 4.40
3985 3996 0.322726 CCCATCCATGTGTGAGTGCA 60.323 55.000 0.00 0.00 0.00 4.57
3986 3997 1.683938 CCCATCCATGTGTGAGTGCAT 60.684 52.381 0.00 0.00 0.00 3.96
3987 3998 2.421811 CCCATCCATGTGTGAGTGCATA 60.422 50.000 0.00 0.00 0.00 3.14
3988 3999 3.281158 CCATCCATGTGTGAGTGCATAA 58.719 45.455 0.00 0.00 0.00 1.90
3989 4000 3.314357 CCATCCATGTGTGAGTGCATAAG 59.686 47.826 0.00 0.00 0.00 1.73
3990 4001 3.701205 TCCATGTGTGAGTGCATAAGT 57.299 42.857 0.00 0.00 0.00 2.24
3991 4002 3.337358 TCCATGTGTGAGTGCATAAGTG 58.663 45.455 0.00 0.00 0.00 3.16
3992 4003 3.076621 CCATGTGTGAGTGCATAAGTGT 58.923 45.455 0.00 0.00 0.00 3.55
3993 4004 3.120095 CCATGTGTGAGTGCATAAGTGTG 60.120 47.826 0.00 0.00 0.00 3.82
3994 4005 2.493035 TGTGTGAGTGCATAAGTGTGG 58.507 47.619 0.00 0.00 0.00 4.17
3995 4006 2.158827 TGTGTGAGTGCATAAGTGTGGT 60.159 45.455 0.00 0.00 0.00 4.16
3996 4007 2.224079 GTGTGAGTGCATAAGTGTGGTG 59.776 50.000 0.00 0.00 0.00 4.17
3997 4008 1.806542 GTGAGTGCATAAGTGTGGTGG 59.193 52.381 0.00 0.00 0.00 4.61
3998 4009 1.419762 TGAGTGCATAAGTGTGGTGGT 59.580 47.619 0.00 0.00 0.00 4.16
3999 4010 1.806542 GAGTGCATAAGTGTGGTGGTG 59.193 52.381 0.00 0.00 0.00 4.17
4000 4011 0.881118 GTGCATAAGTGTGGTGGTGG 59.119 55.000 0.00 0.00 0.00 4.61
4001 4012 0.476338 TGCATAAGTGTGGTGGTGGT 59.524 50.000 0.00 0.00 0.00 4.16
4002 4013 0.881118 GCATAAGTGTGGTGGTGGTG 59.119 55.000 0.00 0.00 0.00 4.17
4003 4014 1.533625 CATAAGTGTGGTGGTGGTGG 58.466 55.000 0.00 0.00 0.00 4.61
4004 4015 1.145571 ATAAGTGTGGTGGTGGTGGT 58.854 50.000 0.00 0.00 0.00 4.16
4005 4016 0.181587 TAAGTGTGGTGGTGGTGGTG 59.818 55.000 0.00 0.00 0.00 4.17
4006 4017 2.518349 GTGTGGTGGTGGTGGTGG 60.518 66.667 0.00 0.00 0.00 4.61
4007 4018 3.018193 TGTGGTGGTGGTGGTGGT 61.018 61.111 0.00 0.00 0.00 4.16
4008 4019 2.518349 GTGGTGGTGGTGGTGGTG 60.518 66.667 0.00 0.00 0.00 4.17
4009 4020 2.692741 TGGTGGTGGTGGTGGTGA 60.693 61.111 0.00 0.00 0.00 4.02
4010 4021 2.081787 TGGTGGTGGTGGTGGTGAT 61.082 57.895 0.00 0.00 0.00 3.06
4011 4022 1.603455 GGTGGTGGTGGTGGTGATG 60.603 63.158 0.00 0.00 0.00 3.07
4012 4023 1.150536 GTGGTGGTGGTGGTGATGT 59.849 57.895 0.00 0.00 0.00 3.06
4013 4024 0.398696 GTGGTGGTGGTGGTGATGTA 59.601 55.000 0.00 0.00 0.00 2.29
4014 4025 0.398696 TGGTGGTGGTGGTGATGTAC 59.601 55.000 0.00 0.00 0.00 2.90
4015 4026 0.398696 GGTGGTGGTGGTGATGTACA 59.601 55.000 0.00 0.00 0.00 2.90
4016 4027 1.004277 GGTGGTGGTGGTGATGTACAT 59.996 52.381 8.43 8.43 0.00 2.29
4017 4028 2.237643 GGTGGTGGTGGTGATGTACATA 59.762 50.000 8.71 0.00 0.00 2.29
4018 4029 3.267483 GTGGTGGTGGTGATGTACATAC 58.733 50.000 8.71 3.01 0.00 2.39
4019 4030 2.907042 TGGTGGTGGTGATGTACATACA 59.093 45.455 8.71 5.83 40.98 2.29
4020 4031 3.267483 GGTGGTGGTGATGTACATACAC 58.733 50.000 20.90 20.90 39.30 2.90
4021 4032 3.055385 GGTGGTGGTGATGTACATACACT 60.055 47.826 24.81 2.35 39.30 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 3.628646 ATGACGACCAAGGCCAGGC 62.629 63.158 13.73 1.26 0.00 4.85
16 17 1.746615 CATGACGACCAAGGCCAGG 60.747 63.158 5.01 9.48 0.00 4.45
17 18 1.746615 CCATGACGACCAAGGCCAG 60.747 63.158 5.01 0.00 0.00 4.85
18 19 2.350895 CCATGACGACCAAGGCCA 59.649 61.111 5.01 0.00 0.00 5.36
21 22 1.926511 GCAAGCCATGACGACCAAGG 61.927 60.000 0.00 0.00 36.73 3.61
22 23 1.503542 GCAAGCCATGACGACCAAG 59.496 57.895 0.00 0.00 0.00 3.61
23 24 2.324330 CGCAAGCCATGACGACCAA 61.324 57.895 0.00 0.00 32.61 3.67
24 25 2.741985 CGCAAGCCATGACGACCA 60.742 61.111 0.00 0.00 32.61 4.02
25 26 2.740714 GACGCAAGCCATGACGACC 61.741 63.158 0.00 0.00 45.62 4.79
26 27 2.027073 TGACGCAAGCCATGACGAC 61.027 57.895 0.00 0.00 45.62 4.34
27 28 2.027073 GTGACGCAAGCCATGACGA 61.027 57.895 0.00 0.00 45.62 4.20
28 29 2.476051 GTGACGCAAGCCATGACG 59.524 61.111 0.00 0.00 45.62 4.35
29 30 2.476051 CGTGACGCAAGCCATGAC 59.524 61.111 0.00 0.00 39.27 3.06
30 31 2.741985 CCGTGACGCAAGCCATGA 60.742 61.111 0.00 0.00 39.27 3.07
31 32 3.803082 CCCGTGACGCAAGCCATG 61.803 66.667 0.00 0.00 45.62 3.66
32 33 3.545124 TTCCCGTGACGCAAGCCAT 62.545 57.895 0.00 0.00 45.62 4.40
33 34 4.243008 TTCCCGTGACGCAAGCCA 62.243 61.111 0.00 0.00 45.62 4.75
34 35 3.723348 GTTCCCGTGACGCAAGCC 61.723 66.667 0.00 0.00 45.62 4.35
35 36 3.723348 GGTTCCCGTGACGCAAGC 61.723 66.667 0.00 0.03 45.62 4.01
37 38 2.029964 GAGGTTCCCGTGACGCAA 59.970 61.111 0.00 0.00 0.00 4.85
38 39 2.579657 ATGAGGTTCCCGTGACGCA 61.580 57.895 0.00 0.00 0.00 5.24
39 40 2.100631 CATGAGGTTCCCGTGACGC 61.101 63.158 0.00 0.00 0.00 5.19
40 41 0.458543 CTCATGAGGTTCCCGTGACG 60.459 60.000 15.38 0.00 0.00 4.35
41 42 0.108138 CCTCATGAGGTTCCCGTGAC 60.108 60.000 30.55 0.00 43.61 3.67
42 43 2.286826 CCTCATGAGGTTCCCGTGA 58.713 57.895 30.55 0.00 43.61 4.35
43 44 4.941609 CCTCATGAGGTTCCCGTG 57.058 61.111 30.55 5.33 43.61 4.94
60 61 2.696187 GAGAGATCAAGGTGAGGGGTAC 59.304 54.545 0.00 0.00 0.00 3.34
61 62 2.359355 GGAGAGATCAAGGTGAGGGGTA 60.359 54.545 0.00 0.00 0.00 3.69
62 63 1.623834 GGAGAGATCAAGGTGAGGGGT 60.624 57.143 0.00 0.00 0.00 4.95
63 64 1.127343 GGAGAGATCAAGGTGAGGGG 58.873 60.000 0.00 0.00 0.00 4.79
64 65 0.749649 CGGAGAGATCAAGGTGAGGG 59.250 60.000 0.00 0.00 0.00 4.30
65 66 0.103937 GCGGAGAGATCAAGGTGAGG 59.896 60.000 0.00 0.00 0.00 3.86
66 67 0.103937 GGCGGAGAGATCAAGGTGAG 59.896 60.000 0.00 0.00 0.00 3.51
67 68 1.330655 GGGCGGAGAGATCAAGGTGA 61.331 60.000 0.00 0.00 0.00 4.02
68 69 1.144936 GGGCGGAGAGATCAAGGTG 59.855 63.158 0.00 0.00 0.00 4.00
69 70 2.066999 GGGGCGGAGAGATCAAGGT 61.067 63.158 0.00 0.00 0.00 3.50
70 71 2.825264 GGGGCGGAGAGATCAAGG 59.175 66.667 0.00 0.00 0.00 3.61
71 72 2.419198 CGGGGCGGAGAGATCAAG 59.581 66.667 0.00 0.00 0.00 3.02
90 91 4.463879 CCTCACCAGGCAGGCTCG 62.464 72.222 0.00 0.00 43.14 5.03
99 100 4.463879 CAGGAGCGGCCTCACCAG 62.464 72.222 12.01 0.00 46.97 4.00
101 102 4.154347 CTCAGGAGCGGCCTCACC 62.154 72.222 0.14 0.14 46.97 4.02
102 103 4.154347 CCTCAGGAGCGGCCTCAC 62.154 72.222 0.00 0.00 46.97 3.51
103 104 4.382541 TCCTCAGGAGCGGCCTCA 62.383 66.667 0.00 0.00 46.97 3.86
104 105 3.535962 CTCCTCAGGAGCGGCCTC 61.536 72.222 8.12 0.00 46.97 4.70
112 113 1.152030 ACACAAGGCCTCCTCAGGA 60.152 57.895 5.23 0.00 43.65 3.86
113 114 1.298014 GACACAAGGCCTCCTCAGG 59.702 63.158 5.23 0.00 43.82 3.86
114 115 1.079543 CGACACAAGGCCTCCTCAG 60.080 63.158 5.23 0.00 30.89 3.35
115 116 1.816863 GACGACACAAGGCCTCCTCA 61.817 60.000 5.23 0.00 30.89 3.86
116 117 1.079750 GACGACACAAGGCCTCCTC 60.080 63.158 5.23 0.00 30.89 3.71
117 118 2.584391 GGACGACACAAGGCCTCCT 61.584 63.158 5.23 0.00 32.85 3.69
118 119 2.047179 GGACGACACAAGGCCTCC 60.047 66.667 5.23 0.00 32.85 4.30
119 120 2.432628 CGGACGACACAAGGCCTC 60.433 66.667 5.23 0.00 33.64 4.70
120 121 4.681978 GCGGACGACACAAGGCCT 62.682 66.667 0.00 0.00 33.64 5.19
122 123 4.681978 AGGCGGACGACACAAGGC 62.682 66.667 0.00 0.00 0.00 4.35
123 124 2.432628 GAGGCGGACGACACAAGG 60.433 66.667 0.00 0.00 0.00 3.61
124 125 2.805353 CGAGGCGGACGACACAAG 60.805 66.667 0.00 0.00 0.00 3.16
155 156 0.108615 ACAATCAAGACCCTCGCGAG 60.109 55.000 29.06 29.06 0.00 5.03
156 157 0.320374 AACAATCAAGACCCTCGCGA 59.680 50.000 9.26 9.26 0.00 5.87
157 158 0.443869 CAACAATCAAGACCCTCGCG 59.556 55.000 0.00 0.00 0.00 5.87
158 159 0.804989 CCAACAATCAAGACCCTCGC 59.195 55.000 0.00 0.00 0.00 5.03
159 160 2.185004 ACCAACAATCAAGACCCTCG 57.815 50.000 0.00 0.00 0.00 4.63
160 161 3.253432 GTCAACCAACAATCAAGACCCTC 59.747 47.826 0.00 0.00 0.00 4.30
161 162 3.222603 GTCAACCAACAATCAAGACCCT 58.777 45.455 0.00 0.00 0.00 4.34
162 163 2.031157 CGTCAACCAACAATCAAGACCC 60.031 50.000 0.00 0.00 0.00 4.46
163 164 2.875933 TCGTCAACCAACAATCAAGACC 59.124 45.455 0.00 0.00 0.00 3.85
164 165 4.272504 TCTTCGTCAACCAACAATCAAGAC 59.727 41.667 0.00 0.00 0.00 3.01
165 166 4.272504 GTCTTCGTCAACCAACAATCAAGA 59.727 41.667 0.00 0.00 0.00 3.02
166 167 4.527564 GTCTTCGTCAACCAACAATCAAG 58.472 43.478 0.00 0.00 0.00 3.02
167 168 3.314080 GGTCTTCGTCAACCAACAATCAA 59.686 43.478 0.00 0.00 35.53 2.57
168 169 2.875933 GGTCTTCGTCAACCAACAATCA 59.124 45.455 0.00 0.00 35.53 2.57
169 170 2.096417 CGGTCTTCGTCAACCAACAATC 60.096 50.000 0.00 0.00 35.13 2.67
170 171 1.871039 CGGTCTTCGTCAACCAACAAT 59.129 47.619 0.00 0.00 35.13 2.71
171 172 1.292061 CGGTCTTCGTCAACCAACAA 58.708 50.000 0.00 0.00 35.13 2.83
172 173 0.531090 CCGGTCTTCGTCAACCAACA 60.531 55.000 0.00 0.00 35.13 3.33
173 174 1.838568 GCCGGTCTTCGTCAACCAAC 61.839 60.000 1.90 0.00 35.13 3.77
174 175 1.595929 GCCGGTCTTCGTCAACCAA 60.596 57.895 1.90 0.00 35.13 3.67
175 176 2.029964 GCCGGTCTTCGTCAACCA 59.970 61.111 1.90 0.00 35.13 3.67
176 177 2.741211 GGCCGGTCTTCGTCAACC 60.741 66.667 1.90 0.00 37.11 3.77
177 178 2.476534 TACGGCCGGTCTTCGTCAAC 62.477 60.000 31.76 0.00 38.19 3.18
178 179 2.267351 TACGGCCGGTCTTCGTCAA 61.267 57.895 31.76 0.00 38.19 3.18
179 180 2.672651 TACGGCCGGTCTTCGTCA 60.673 61.111 31.76 0.00 38.19 4.35
180 181 2.202531 GTACGGCCGGTCTTCGTC 60.203 66.667 31.76 6.26 38.19 4.20
181 182 2.674380 AGTACGGCCGGTCTTCGT 60.674 61.111 31.76 9.01 40.40 3.85
182 183 2.202570 CAGTACGGCCGGTCTTCG 60.203 66.667 31.76 11.87 38.88 3.79
183 184 2.183555 CCAGTACGGCCGGTCTTC 59.816 66.667 31.76 14.10 0.00 2.87
184 185 3.387947 CCCAGTACGGCCGGTCTT 61.388 66.667 31.76 11.18 0.00 3.01
192 193 3.319198 ACCAGTGGCCCAGTACGG 61.319 66.667 9.78 0.25 0.00 4.02
193 194 2.047274 CACCAGTGGCCCAGTACG 60.047 66.667 9.78 0.00 0.00 3.67
194 195 2.351276 CCACCAGTGGCCCAGTAC 59.649 66.667 9.78 0.00 44.73 2.73
226 227 4.711949 AGACTTGCCTGCCTGCGG 62.712 66.667 0.00 0.00 0.00 5.69
227 228 3.429141 CAGACTTGCCTGCCTGCG 61.429 66.667 0.00 0.00 0.00 5.18
228 229 3.060615 CCAGACTTGCCTGCCTGC 61.061 66.667 0.00 0.00 32.97 4.85
229 230 2.360852 CCCAGACTTGCCTGCCTG 60.361 66.667 0.00 0.00 32.97 4.85
230 231 3.655211 CCCCAGACTTGCCTGCCT 61.655 66.667 0.00 0.00 32.97 4.75
231 232 3.650950 TCCCCAGACTTGCCTGCC 61.651 66.667 0.00 0.00 32.97 4.85
232 233 2.360475 GTCCCCAGACTTGCCTGC 60.360 66.667 0.00 0.00 40.10 4.85
233 234 2.352805 GGTCCCCAGACTTGCCTG 59.647 66.667 0.00 0.00 43.05 4.85
234 235 2.936032 GGGTCCCCAGACTTGCCT 60.936 66.667 0.00 0.00 43.05 4.75
235 236 4.048470 GGGGTCCCCAGACTTGCC 62.048 72.222 23.53 0.00 44.65 4.52
245 246 2.931649 TTCTGGAACGGGGGTCCC 60.932 66.667 0.00 0.00 41.09 4.46
246 247 2.350134 GTTCTGGAACGGGGGTCC 59.650 66.667 0.00 0.00 35.55 4.46
254 255 2.668280 GCTGTCGGCGTTCTGGAAC 61.668 63.158 6.85 3.62 37.92 3.62
255 256 2.357034 GCTGTCGGCGTTCTGGAA 60.357 61.111 6.85 0.00 0.00 3.53
256 257 4.373116 GGCTGTCGGCGTTCTGGA 62.373 66.667 6.85 0.00 42.94 3.86
257 258 4.379243 AGGCTGTCGGCGTTCTGG 62.379 66.667 6.85 1.18 42.94 3.86
258 259 3.114616 CAGGCTGTCGGCGTTCTG 61.115 66.667 6.85 7.04 42.94 3.02
296 297 3.560251 CTAGGGATGCGGGGGTGG 61.560 72.222 0.00 0.00 0.00 4.61
297 298 4.256180 GCTAGGGATGCGGGGGTG 62.256 72.222 0.00 0.00 0.00 4.61
298 299 4.499116 AGCTAGGGATGCGGGGGT 62.499 66.667 0.00 0.00 35.28 4.95
299 300 3.631046 GAGCTAGGGATGCGGGGG 61.631 72.222 0.00 0.00 35.28 5.40
300 301 2.525381 AGAGCTAGGGATGCGGGG 60.525 66.667 0.00 0.00 35.28 5.73
301 302 1.118356 AAGAGAGCTAGGGATGCGGG 61.118 60.000 0.00 0.00 35.28 6.13
302 303 0.033228 CAAGAGAGCTAGGGATGCGG 59.967 60.000 0.00 0.00 35.28 5.69
303 304 1.035923 TCAAGAGAGCTAGGGATGCG 58.964 55.000 0.00 0.00 35.28 4.73
304 305 1.269517 CGTCAAGAGAGCTAGGGATGC 60.270 57.143 0.00 0.00 0.00 3.91
305 306 2.302260 TCGTCAAGAGAGCTAGGGATG 58.698 52.381 0.00 0.00 0.00 3.51
306 307 2.738587 TCGTCAAGAGAGCTAGGGAT 57.261 50.000 0.00 0.00 0.00 3.85
307 308 2.092375 TCATCGTCAAGAGAGCTAGGGA 60.092 50.000 0.00 0.00 0.00 4.20
308 309 2.293122 CTCATCGTCAAGAGAGCTAGGG 59.707 54.545 0.00 0.00 33.74 3.53
309 310 2.287547 GCTCATCGTCAAGAGAGCTAGG 60.288 54.545 6.06 0.00 42.03 3.02
310 311 2.287547 GGCTCATCGTCAAGAGAGCTAG 60.288 54.545 12.31 0.00 43.39 3.42
311 312 1.678627 GGCTCATCGTCAAGAGAGCTA 59.321 52.381 12.31 0.00 43.39 3.32
312 313 0.459489 GGCTCATCGTCAAGAGAGCT 59.541 55.000 12.31 0.00 43.39 4.09
313 314 0.459489 AGGCTCATCGTCAAGAGAGC 59.541 55.000 4.79 4.79 43.27 4.09
314 315 1.476085 ACAGGCTCATCGTCAAGAGAG 59.524 52.381 0.00 0.00 33.74 3.20
315 316 1.550327 ACAGGCTCATCGTCAAGAGA 58.450 50.000 0.00 0.00 33.74 3.10
316 317 2.266554 GAACAGGCTCATCGTCAAGAG 58.733 52.381 0.00 0.00 35.01 2.85
317 318 1.066858 GGAACAGGCTCATCGTCAAGA 60.067 52.381 0.00 0.00 0.00 3.02
318 319 1.363744 GGAACAGGCTCATCGTCAAG 58.636 55.000 0.00 0.00 0.00 3.02
319 320 0.389817 CGGAACAGGCTCATCGTCAA 60.390 55.000 0.00 0.00 0.00 3.18
320 321 1.215382 CGGAACAGGCTCATCGTCA 59.785 57.895 0.00 0.00 0.00 4.35
321 322 2.167861 GCGGAACAGGCTCATCGTC 61.168 63.158 0.00 0.00 0.00 4.20
322 323 2.125512 GCGGAACAGGCTCATCGT 60.126 61.111 0.00 0.00 0.00 3.73
323 324 2.892425 GGCGGAACAGGCTCATCG 60.892 66.667 0.00 0.00 0.00 3.84
324 325 2.514824 GGGCGGAACAGGCTCATC 60.515 66.667 0.00 0.00 36.85 2.92
325 326 4.473520 CGGGCGGAACAGGCTCAT 62.474 66.667 0.00 0.00 36.85 2.90
365 366 1.070786 TGGAGGGCAGACGTTCAAC 59.929 57.895 0.00 0.00 0.00 3.18
366 367 1.070786 GTGGAGGGCAGACGTTCAA 59.929 57.895 0.00 0.00 0.00 2.69
367 368 1.816863 GAGTGGAGGGCAGACGTTCA 61.817 60.000 0.00 0.00 0.00 3.18
368 369 1.079750 GAGTGGAGGGCAGACGTTC 60.080 63.158 0.00 0.00 0.00 3.95
369 370 2.932234 CGAGTGGAGGGCAGACGTT 61.932 63.158 0.00 0.00 0.00 3.99
370 371 3.374402 CGAGTGGAGGGCAGACGT 61.374 66.667 0.00 0.00 0.00 4.34
371 372 4.135153 CCGAGTGGAGGGCAGACG 62.135 72.222 0.00 0.00 37.49 4.18
377 378 4.760047 CCAACGCCGAGTGGAGGG 62.760 72.222 5.80 0.00 39.76 4.30
378 379 3.934391 GACCAACGCCGAGTGGAGG 62.934 68.421 16.43 0.20 39.76 4.30
379 380 2.432628 GACCAACGCCGAGTGGAG 60.433 66.667 16.43 0.00 41.49 3.86
380 381 3.228017 TGACCAACGCCGAGTGGA 61.228 61.111 16.43 0.00 37.49 4.02
381 382 3.041940 GTGACCAACGCCGAGTGG 61.042 66.667 9.50 9.50 38.77 4.00
382 383 3.403057 CGTGACCAACGCCGAGTG 61.403 66.667 0.00 0.00 46.99 3.51
394 395 4.353437 AAGACCGTCGGGCGTGAC 62.353 66.667 17.28 0.00 34.63 3.67
395 396 4.351938 CAAGACCGTCGGGCGTGA 62.352 66.667 26.87 0.00 42.81 4.35
399 400 4.778143 ATGGCAAGACCGTCGGGC 62.778 66.667 17.28 13.96 43.94 6.13
400 401 2.511600 GATGGCAAGACCGTCGGG 60.512 66.667 17.28 0.00 44.55 5.14
421 422 2.124778 GCAGAGGAAGCTGAGGGC 60.125 66.667 0.00 0.00 38.14 5.19
422 423 0.107752 GAAGCAGAGGAAGCTGAGGG 60.108 60.000 0.00 0.00 42.53 4.30
423 424 0.459934 CGAAGCAGAGGAAGCTGAGG 60.460 60.000 0.00 0.00 42.53 3.86
424 425 0.459934 CCGAAGCAGAGGAAGCTGAG 60.460 60.000 0.00 0.00 42.53 3.35
425 426 1.188219 ACCGAAGCAGAGGAAGCTGA 61.188 55.000 0.00 0.00 42.53 4.26
426 427 0.321122 AACCGAAGCAGAGGAAGCTG 60.321 55.000 0.00 0.00 42.53 4.24
427 428 0.321122 CAACCGAAGCAGAGGAAGCT 60.321 55.000 0.00 0.00 45.97 3.74
428 429 1.301677 CCAACCGAAGCAGAGGAAGC 61.302 60.000 0.00 0.00 0.00 3.86
429 430 0.674895 CCCAACCGAAGCAGAGGAAG 60.675 60.000 0.00 0.00 0.00 3.46
430 431 1.374947 CCCAACCGAAGCAGAGGAA 59.625 57.895 0.00 0.00 0.00 3.36
431 432 1.841556 ACCCAACCGAAGCAGAGGA 60.842 57.895 0.00 0.00 0.00 3.71
432 433 1.672356 CACCCAACCGAAGCAGAGG 60.672 63.158 0.00 0.00 0.00 3.69
433 434 1.672356 CCACCCAACCGAAGCAGAG 60.672 63.158 0.00 0.00 0.00 3.35
434 435 2.429930 CCACCCAACCGAAGCAGA 59.570 61.111 0.00 0.00 0.00 4.26
435 436 3.365265 GCCACCCAACCGAAGCAG 61.365 66.667 0.00 0.00 0.00 4.24
436 437 3.505790 ATGCCACCCAACCGAAGCA 62.506 57.895 0.00 0.00 34.28 3.91
437 438 2.676471 ATGCCACCCAACCGAAGC 60.676 61.111 0.00 0.00 0.00 3.86
438 439 2.398554 CGATGCCACCCAACCGAAG 61.399 63.158 0.00 0.00 0.00 3.79
439 440 2.359354 CGATGCCACCCAACCGAA 60.359 61.111 0.00 0.00 0.00 4.30
440 441 4.402528 CCGATGCCACCCAACCGA 62.403 66.667 0.00 0.00 0.00 4.69
441 442 4.715523 ACCGATGCCACCCAACCG 62.716 66.667 0.00 0.00 0.00 4.44
442 443 3.061848 CACCGATGCCACCCAACC 61.062 66.667 0.00 0.00 0.00 3.77
443 444 3.061848 CCACCGATGCCACCCAAC 61.062 66.667 0.00 0.00 0.00 3.77
465 466 4.849310 TATGTTGCCCCTCGCGCC 62.849 66.667 0.00 0.00 42.08 6.53
466 467 1.724582 AAATATGTTGCCCCTCGCGC 61.725 55.000 0.00 0.00 42.08 6.86
467 468 0.307760 GAAATATGTTGCCCCTCGCG 59.692 55.000 0.00 0.00 42.08 5.87
468 469 1.680338 AGAAATATGTTGCCCCTCGC 58.320 50.000 0.00 0.00 38.31 5.03
469 470 3.278574 TGAAGAAATATGTTGCCCCTCG 58.721 45.455 0.00 0.00 0.00 4.63
470 471 3.067320 GCTGAAGAAATATGTTGCCCCTC 59.933 47.826 0.00 0.00 0.00 4.30
471 472 3.026694 GCTGAAGAAATATGTTGCCCCT 58.973 45.455 0.00 0.00 0.00 4.79
472 473 2.223572 CGCTGAAGAAATATGTTGCCCC 60.224 50.000 0.00 0.00 0.00 5.80
473 474 2.223572 CCGCTGAAGAAATATGTTGCCC 60.224 50.000 0.00 0.00 0.00 5.36
474 475 2.796032 GCCGCTGAAGAAATATGTTGCC 60.796 50.000 0.00 0.00 0.00 4.52
475 476 2.159393 TGCCGCTGAAGAAATATGTTGC 60.159 45.455 0.00 0.00 0.00 4.17
476 477 3.763097 TGCCGCTGAAGAAATATGTTG 57.237 42.857 0.00 0.00 0.00 3.33
477 478 3.067180 CCATGCCGCTGAAGAAATATGTT 59.933 43.478 0.00 0.00 0.00 2.71
478 479 2.620115 CCATGCCGCTGAAGAAATATGT 59.380 45.455 0.00 0.00 0.00 2.29
479 480 2.606308 GCCATGCCGCTGAAGAAATATG 60.606 50.000 0.00 0.00 0.00 1.78
480 481 1.610522 GCCATGCCGCTGAAGAAATAT 59.389 47.619 0.00 0.00 0.00 1.28
481 482 1.024271 GCCATGCCGCTGAAGAAATA 58.976 50.000 0.00 0.00 0.00 1.40
482 483 1.811860 GCCATGCCGCTGAAGAAAT 59.188 52.632 0.00 0.00 0.00 2.17
483 484 2.689785 CGCCATGCCGCTGAAGAAA 61.690 57.895 0.00 0.00 0.00 2.52
484 485 3.126879 CGCCATGCCGCTGAAGAA 61.127 61.111 0.00 0.00 0.00 2.52
485 486 4.081185 TCGCCATGCCGCTGAAGA 62.081 61.111 0.00 0.00 0.00 2.87
486 487 3.869272 GTCGCCATGCCGCTGAAG 61.869 66.667 0.00 0.00 0.00 3.02
487 488 4.393155 AGTCGCCATGCCGCTGAA 62.393 61.111 0.00 0.00 0.00 3.02
492 493 4.457496 AGACCAGTCGCCATGCCG 62.457 66.667 0.00 0.00 34.09 5.69
493 494 2.599645 ATCAGACCAGTCGCCATGCC 62.600 60.000 0.00 0.00 34.09 4.40
494 495 1.153289 ATCAGACCAGTCGCCATGC 60.153 57.895 0.00 0.00 34.09 4.06
495 496 0.176449 TCATCAGACCAGTCGCCATG 59.824 55.000 0.00 0.00 34.09 3.66
496 497 0.463204 CTCATCAGACCAGTCGCCAT 59.537 55.000 0.00 0.00 34.09 4.40
497 498 1.607801 CCTCATCAGACCAGTCGCCA 61.608 60.000 0.00 0.00 34.09 5.69
498 499 1.142748 CCTCATCAGACCAGTCGCC 59.857 63.158 0.00 0.00 34.09 5.54
499 500 0.102120 CTCCTCATCAGACCAGTCGC 59.898 60.000 0.00 0.00 34.09 5.19
500 501 1.756430 TCTCCTCATCAGACCAGTCG 58.244 55.000 0.00 0.00 34.09 4.18
501 502 3.181467 CCATTCTCCTCATCAGACCAGTC 60.181 52.174 0.00 0.00 0.00 3.51
502 503 2.770802 CCATTCTCCTCATCAGACCAGT 59.229 50.000 0.00 0.00 0.00 4.00
503 504 2.485124 GCCATTCTCCTCATCAGACCAG 60.485 54.545 0.00 0.00 0.00 4.00
504 505 1.487976 GCCATTCTCCTCATCAGACCA 59.512 52.381 0.00 0.00 0.00 4.02
505 506 1.539929 CGCCATTCTCCTCATCAGACC 60.540 57.143 0.00 0.00 0.00 3.85
506 507 1.539929 CCGCCATTCTCCTCATCAGAC 60.540 57.143 0.00 0.00 0.00 3.51
507 508 0.755079 CCGCCATTCTCCTCATCAGA 59.245 55.000 0.00 0.00 0.00 3.27
508 509 0.250209 CCCGCCATTCTCCTCATCAG 60.250 60.000 0.00 0.00 0.00 2.90
509 510 0.690744 TCCCGCCATTCTCCTCATCA 60.691 55.000 0.00 0.00 0.00 3.07
510 511 0.469917 TTCCCGCCATTCTCCTCATC 59.530 55.000 0.00 0.00 0.00 2.92
511 512 0.181350 GTTCCCGCCATTCTCCTCAT 59.819 55.000 0.00 0.00 0.00 2.90
512 513 1.602237 GTTCCCGCCATTCTCCTCA 59.398 57.895 0.00 0.00 0.00 3.86
513 514 1.521681 CGTTCCCGCCATTCTCCTC 60.522 63.158 0.00 0.00 0.00 3.71
514 515 2.584608 CGTTCCCGCCATTCTCCT 59.415 61.111 0.00 0.00 0.00 3.69
515 516 2.513897 CCGTTCCCGCCATTCTCC 60.514 66.667 0.00 0.00 0.00 3.71
516 517 3.202706 GCCGTTCCCGCCATTCTC 61.203 66.667 0.00 0.00 0.00 2.87
525 526 3.372554 CTTCTCCTCCGCCGTTCCC 62.373 68.421 0.00 0.00 0.00 3.97
526 527 2.184579 CTTCTCCTCCGCCGTTCC 59.815 66.667 0.00 0.00 0.00 3.62
527 528 2.184579 CCTTCTCCTCCGCCGTTC 59.815 66.667 0.00 0.00 0.00 3.95
528 529 3.391382 CCCTTCTCCTCCGCCGTT 61.391 66.667 0.00 0.00 0.00 4.44
532 533 3.689002 CTTGCCCCTTCTCCTCCGC 62.689 68.421 0.00 0.00 0.00 5.54
533 534 2.586792 CTTGCCCCTTCTCCTCCG 59.413 66.667 0.00 0.00 0.00 4.63
534 535 2.142292 TTGCTTGCCCCTTCTCCTCC 62.142 60.000 0.00 0.00 0.00 4.30
535 536 0.033699 ATTGCTTGCCCCTTCTCCTC 60.034 55.000 0.00 0.00 0.00 3.71
536 537 0.411058 AATTGCTTGCCCCTTCTCCT 59.589 50.000 0.00 0.00 0.00 3.69
537 538 0.533951 CAATTGCTTGCCCCTTCTCC 59.466 55.000 0.00 0.00 0.00 3.71
538 539 0.533951 CCAATTGCTTGCCCCTTCTC 59.466 55.000 0.00 0.00 0.00 2.87
539 540 0.906282 CCCAATTGCTTGCCCCTTCT 60.906 55.000 0.00 0.00 0.00 2.85
540 541 0.904394 TCCCAATTGCTTGCCCCTTC 60.904 55.000 0.00 0.00 0.00 3.46
541 542 0.906282 CTCCCAATTGCTTGCCCCTT 60.906 55.000 0.00 0.00 0.00 3.95
542 543 1.305549 CTCCCAATTGCTTGCCCCT 60.306 57.895 0.00 0.00 0.00 4.79
543 544 2.361567 CCTCCCAATTGCTTGCCCC 61.362 63.158 0.00 0.00 0.00 5.80
544 545 0.904394 TTCCTCCCAATTGCTTGCCC 60.904 55.000 0.00 0.00 0.00 5.36
545 546 0.975887 TTTCCTCCCAATTGCTTGCC 59.024 50.000 0.00 0.00 0.00 4.52
546 547 2.624636 CATTTCCTCCCAATTGCTTGC 58.375 47.619 0.00 0.00 0.00 4.01
547 548 2.833338 TCCATTTCCTCCCAATTGCTTG 59.167 45.455 0.00 0.00 0.00 4.01
548 549 3.102204 CTCCATTTCCTCCCAATTGCTT 58.898 45.455 0.00 0.00 0.00 3.91
549 550 2.625087 CCTCCATTTCCTCCCAATTGCT 60.625 50.000 0.00 0.00 0.00 3.91
550 551 1.758862 CCTCCATTTCCTCCCAATTGC 59.241 52.381 0.00 0.00 0.00 3.56
551 552 2.391678 CCCTCCATTTCCTCCCAATTG 58.608 52.381 0.00 0.00 0.00 2.32
552 553 1.291939 CCCCTCCATTTCCTCCCAATT 59.708 52.381 0.00 0.00 0.00 2.32
553 554 0.936691 CCCCTCCATTTCCTCCCAAT 59.063 55.000 0.00 0.00 0.00 3.16
554 555 0.178816 TCCCCTCCATTTCCTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
555 556 0.178816 TTCCCCTCCATTTCCTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
556 557 0.553333 CTTCCCCTCCATTTCCTCCC 59.447 60.000 0.00 0.00 0.00 4.30
557 558 0.553333 CCTTCCCCTCCATTTCCTCC 59.447 60.000 0.00 0.00 0.00 4.30
558 559 1.596496 TCCTTCCCCTCCATTTCCTC 58.404 55.000 0.00 0.00 0.00 3.71
559 560 1.855599 CATCCTTCCCCTCCATTTCCT 59.144 52.381 0.00 0.00 0.00 3.36
560 561 1.133356 CCATCCTTCCCCTCCATTTCC 60.133 57.143 0.00 0.00 0.00 3.13
561 562 1.133356 CCCATCCTTCCCCTCCATTTC 60.133 57.143 0.00 0.00 0.00 2.17
562 563 0.936691 CCCATCCTTCCCCTCCATTT 59.063 55.000 0.00 0.00 0.00 2.32
563 564 1.659035 GCCCATCCTTCCCCTCCATT 61.659 60.000 0.00 0.00 0.00 3.16
564 565 2.087461 GCCCATCCTTCCCCTCCAT 61.087 63.158 0.00 0.00 0.00 3.41
565 566 2.696125 GCCCATCCTTCCCCTCCA 60.696 66.667 0.00 0.00 0.00 3.86
566 567 1.874299 TTTGCCCATCCTTCCCCTCC 61.874 60.000 0.00 0.00 0.00 4.30
567 568 0.041090 TTTTGCCCATCCTTCCCCTC 59.959 55.000 0.00 0.00 0.00 4.30
568 569 0.252239 GTTTTGCCCATCCTTCCCCT 60.252 55.000 0.00 0.00 0.00 4.79
569 570 1.604147 CGTTTTGCCCATCCTTCCCC 61.604 60.000 0.00 0.00 0.00 4.81
570 571 0.610785 TCGTTTTGCCCATCCTTCCC 60.611 55.000 0.00 0.00 0.00 3.97
571 572 0.526211 GTCGTTTTGCCCATCCTTCC 59.474 55.000 0.00 0.00 0.00 3.46
572 573 1.200020 CTGTCGTTTTGCCCATCCTTC 59.800 52.381 0.00 0.00 0.00 3.46
573 574 1.247567 CTGTCGTTTTGCCCATCCTT 58.752 50.000 0.00 0.00 0.00 3.36
574 575 0.609131 CCTGTCGTTTTGCCCATCCT 60.609 55.000 0.00 0.00 0.00 3.24
575 576 0.608035 TCCTGTCGTTTTGCCCATCC 60.608 55.000 0.00 0.00 0.00 3.51
576 577 1.243902 TTCCTGTCGTTTTGCCCATC 58.756 50.000 0.00 0.00 0.00 3.51
577 578 1.923356 ATTCCTGTCGTTTTGCCCAT 58.077 45.000 0.00 0.00 0.00 4.00
578 579 2.570415 TATTCCTGTCGTTTTGCCCA 57.430 45.000 0.00 0.00 0.00 5.36
579 580 2.479560 GCATATTCCTGTCGTTTTGCCC 60.480 50.000 0.00 0.00 0.00 5.36
580 581 2.479560 GGCATATTCCTGTCGTTTTGCC 60.480 50.000 0.00 0.00 41.30 4.52
581 582 2.423538 AGGCATATTCCTGTCGTTTTGC 59.576 45.455 0.00 0.00 34.56 3.68
582 583 4.019919 CAGGCATATTCCTGTCGTTTTG 57.980 45.455 12.81 0.00 46.59 2.44
591 592 1.204146 ACGACACCAGGCATATTCCT 58.796 50.000 0.00 0.00 36.78 3.36
592 593 2.364324 TCTACGACACCAGGCATATTCC 59.636 50.000 0.00 0.00 0.00 3.01
593 594 3.728076 TCTACGACACCAGGCATATTC 57.272 47.619 0.00 0.00 0.00 1.75
594 595 4.322049 GCTATCTACGACACCAGGCATATT 60.322 45.833 0.00 0.00 0.00 1.28
595 596 3.193691 GCTATCTACGACACCAGGCATAT 59.806 47.826 0.00 0.00 0.00 1.78
596 597 2.557056 GCTATCTACGACACCAGGCATA 59.443 50.000 0.00 0.00 0.00 3.14
597 598 1.341531 GCTATCTACGACACCAGGCAT 59.658 52.381 0.00 0.00 0.00 4.40
598 599 0.744874 GCTATCTACGACACCAGGCA 59.255 55.000 0.00 0.00 0.00 4.75
599 600 0.744874 TGCTATCTACGACACCAGGC 59.255 55.000 0.00 0.00 0.00 4.85
600 601 1.268589 CGTGCTATCTACGACACCAGG 60.269 57.143 0.00 0.00 43.82 4.45
601 602 1.400846 ACGTGCTATCTACGACACCAG 59.599 52.381 4.43 0.00 43.82 4.00
602 603 1.131693 CACGTGCTATCTACGACACCA 59.868 52.381 0.82 0.00 43.82 4.17
603 604 1.823828 CACGTGCTATCTACGACACC 58.176 55.000 0.82 0.00 43.82 4.16
604 605 1.189403 GCACGTGCTATCTACGACAC 58.811 55.000 32.55 0.00 43.82 3.67
605 606 0.099968 GGCACGTGCTATCTACGACA 59.900 55.000 36.84 0.00 43.82 4.35
606 607 0.594284 GGGCACGTGCTATCTACGAC 60.594 60.000 36.84 18.42 43.82 4.34
607 608 1.033202 TGGGCACGTGCTATCTACGA 61.033 55.000 36.84 15.88 43.82 3.43
608 609 0.870307 GTGGGCACGTGCTATCTACG 60.870 60.000 36.84 0.00 46.31 3.51
609 610 2.973420 GTGGGCACGTGCTATCTAC 58.027 57.895 36.84 24.68 41.70 2.59
620 621 4.279043 AAAAAGGCGCGTGGGCAC 62.279 61.111 8.43 0.77 45.36 5.01
621 622 4.277593 CAAAAAGGCGCGTGGGCA 62.278 61.111 8.43 0.00 45.36 5.36
622 623 3.783478 AACAAAAAGGCGCGTGGGC 62.783 57.895 8.43 0.00 42.69 5.36
623 624 1.660264 GAACAAAAAGGCGCGTGGG 60.660 57.895 8.43 0.00 0.00 4.61
624 625 2.008697 CGAACAAAAAGGCGCGTGG 61.009 57.895 8.43 0.00 0.00 4.94
625 626 2.008697 CCGAACAAAAAGGCGCGTG 61.009 57.895 8.43 0.00 0.00 5.34
626 627 2.330041 CCGAACAAAAAGGCGCGT 59.670 55.556 8.43 0.00 0.00 6.01
627 628 2.428403 CCCGAACAAAAAGGCGCG 60.428 61.111 0.00 0.00 0.00 6.86
628 629 1.371267 GACCCGAACAAAAAGGCGC 60.371 57.895 0.00 0.00 0.00 6.53
629 630 0.237498 GAGACCCGAACAAAAAGGCG 59.763 55.000 0.00 0.00 0.00 5.52
630 631 0.237498 CGAGACCCGAACAAAAAGGC 59.763 55.000 0.00 0.00 41.76 4.35
631 632 0.872388 CCGAGACCCGAACAAAAAGG 59.128 55.000 0.00 0.00 41.76 3.11
632 633 1.873698 TCCGAGACCCGAACAAAAAG 58.126 50.000 0.00 0.00 41.76 2.27
633 634 2.554370 ATCCGAGACCCGAACAAAAA 57.446 45.000 0.00 0.00 41.76 1.94
634 635 2.419667 GAATCCGAGACCCGAACAAAA 58.580 47.619 0.00 0.00 41.76 2.44
635 636 1.670674 CGAATCCGAGACCCGAACAAA 60.671 52.381 0.00 0.00 41.76 2.83
636 637 0.108992 CGAATCCGAGACCCGAACAA 60.109 55.000 0.00 0.00 41.76 2.83
637 638 1.509463 CGAATCCGAGACCCGAACA 59.491 57.895 0.00 0.00 41.76 3.18
638 639 1.877165 GCGAATCCGAGACCCGAAC 60.877 63.158 0.00 0.00 41.76 3.95
639 640 2.050350 AGCGAATCCGAGACCCGAA 61.050 57.895 0.00 0.00 41.76 4.30
640 641 2.439701 AGCGAATCCGAGACCCGA 60.440 61.111 0.00 0.00 41.76 5.14
641 642 2.278857 CAGCGAATCCGAGACCCG 60.279 66.667 0.00 0.00 38.22 5.28
642 643 2.107141 CCAGCGAATCCGAGACCC 59.893 66.667 0.00 0.00 38.22 4.46
643 644 1.084370 CAACCAGCGAATCCGAGACC 61.084 60.000 0.00 0.00 38.22 3.85
644 645 0.389948 ACAACCAGCGAATCCGAGAC 60.390 55.000 0.00 0.00 38.22 3.36
645 646 0.320374 AACAACCAGCGAATCCGAGA 59.680 50.000 0.00 0.00 38.22 4.04
646 647 2.004583 TAACAACCAGCGAATCCGAG 57.995 50.000 0.00 0.00 38.22 4.63
647 648 2.684001 ATAACAACCAGCGAATCCGA 57.316 45.000 0.00 0.00 38.22 4.55
648 649 3.425404 CAAATAACAACCAGCGAATCCG 58.575 45.455 0.00 0.00 39.16 4.18
649 650 3.428862 CCCAAATAACAACCAGCGAATCC 60.429 47.826 0.00 0.00 0.00 3.01
650 651 3.769536 CCCAAATAACAACCAGCGAATC 58.230 45.455 0.00 0.00 0.00 2.52
651 652 2.094234 GCCCAAATAACAACCAGCGAAT 60.094 45.455 0.00 0.00 0.00 3.34
652 653 1.271102 GCCCAAATAACAACCAGCGAA 59.729 47.619 0.00 0.00 0.00 4.70
653 654 0.885196 GCCCAAATAACAACCAGCGA 59.115 50.000 0.00 0.00 0.00 4.93
654 655 0.108851 GGCCCAAATAACAACCAGCG 60.109 55.000 0.00 0.00 0.00 5.18
655 656 0.249120 GGGCCCAAATAACAACCAGC 59.751 55.000 19.95 0.00 0.00 4.85
656 657 1.638529 TGGGCCCAAATAACAACCAG 58.361 50.000 26.33 0.00 0.00 4.00
657 658 2.103153 TTGGGCCCAAATAACAACCA 57.897 45.000 35.47 8.26 32.44 3.67
658 659 2.551287 GGTTTGGGCCCAAATAACAACC 60.551 50.000 44.24 36.44 45.90 3.77
659 660 2.104963 TGGTTTGGGCCCAAATAACAAC 59.895 45.455 44.24 32.74 45.90 3.32
660 661 2.408565 TGGTTTGGGCCCAAATAACAA 58.591 42.857 44.24 28.37 45.90 2.83
661 662 2.103153 TGGTTTGGGCCCAAATAACA 57.897 45.000 44.24 37.09 45.90 2.41
662 663 2.773487 GTTGGTTTGGGCCCAAATAAC 58.227 47.619 44.24 40.18 45.90 1.89
663 664 1.344763 CGTTGGTTTGGGCCCAAATAA 59.655 47.619 44.24 36.60 45.90 1.40
664 665 0.969894 CGTTGGTTTGGGCCCAAATA 59.030 50.000 44.24 34.00 45.90 1.40
665 666 0.760945 TCGTTGGTTTGGGCCCAAAT 60.761 50.000 44.24 0.00 45.90 2.32
666 667 0.760945 ATCGTTGGTTTGGGCCCAAA 60.761 50.000 40.46 40.46 43.30 3.28
667 668 1.152440 ATCGTTGGTTTGGGCCCAA 60.152 52.632 34.07 34.07 39.62 4.12
668 669 1.605165 GATCGTTGGTTTGGGCCCA 60.605 57.895 24.45 24.45 0.00 5.36
669 670 2.696759 CGATCGTTGGTTTGGGCCC 61.697 63.158 17.59 17.59 0.00 5.80
670 671 1.673009 TCGATCGTTGGTTTGGGCC 60.673 57.895 15.94 0.00 0.00 5.80
671 672 0.953960 AGTCGATCGTTGGTTTGGGC 60.954 55.000 15.94 0.00 0.00 5.36
672 673 0.796312 CAGTCGATCGTTGGTTTGGG 59.204 55.000 15.94 0.00 0.00 4.12
673 674 1.790755 TCAGTCGATCGTTGGTTTGG 58.209 50.000 15.94 0.00 0.00 3.28
674 675 3.870723 TTTCAGTCGATCGTTGGTTTG 57.129 42.857 15.94 6.05 0.00 2.93
675 676 3.250040 CCTTTTCAGTCGATCGTTGGTTT 59.750 43.478 15.94 0.00 0.00 3.27
676 677 2.806244 CCTTTTCAGTCGATCGTTGGTT 59.194 45.455 15.94 0.00 0.00 3.67
677 678 2.413837 CCTTTTCAGTCGATCGTTGGT 58.586 47.619 15.94 0.00 0.00 3.67
678 679 1.128692 GCCTTTTCAGTCGATCGTTGG 59.871 52.381 15.94 5.70 0.00 3.77
679 680 1.798223 TGCCTTTTCAGTCGATCGTTG 59.202 47.619 15.94 14.56 0.00 4.10
680 681 1.798813 GTGCCTTTTCAGTCGATCGTT 59.201 47.619 15.94 1.78 0.00 3.85
681 682 1.429463 GTGCCTTTTCAGTCGATCGT 58.571 50.000 15.94 0.00 0.00 3.73
682 683 0.721718 GGTGCCTTTTCAGTCGATCG 59.278 55.000 9.36 9.36 0.00 3.69
683 684 1.087501 GGGTGCCTTTTCAGTCGATC 58.912 55.000 0.00 0.00 0.00 3.69
684 685 0.693049 AGGGTGCCTTTTCAGTCGAT 59.307 50.000 0.00 0.00 0.00 3.59
685 686 0.250295 CAGGGTGCCTTTTCAGTCGA 60.250 55.000 0.00 0.00 0.00 4.20
686 687 1.237285 CCAGGGTGCCTTTTCAGTCG 61.237 60.000 0.00 0.00 0.00 4.18
687 688 0.178990 ACCAGGGTGCCTTTTCAGTC 60.179 55.000 0.00 0.00 0.00 3.51
688 689 0.468029 CACCAGGGTGCCTTTTCAGT 60.468 55.000 5.38 0.00 39.39 3.41
689 690 1.181098 CCACCAGGGTGCCTTTTCAG 61.181 60.000 13.03 0.00 44.16 3.02
690 691 1.152567 CCACCAGGGTGCCTTTTCA 60.153 57.895 13.03 0.00 44.16 2.69
691 692 3.777556 CCACCAGGGTGCCTTTTC 58.222 61.111 13.03 0.00 44.16 2.29
740 741 0.843984 TAGGCTAACAGCATTCCCCC 59.156 55.000 0.00 0.00 44.75 5.40
741 742 2.298610 GTTAGGCTAACAGCATTCCCC 58.701 52.381 27.98 0.92 44.75 4.81
742 743 2.999331 TGTTAGGCTAACAGCATTCCC 58.001 47.619 30.85 7.30 44.75 3.97
768 769 9.268268 CGCTCCTTTCCTTGTATATTTATTACA 57.732 33.333 0.00 0.00 0.00 2.41
769 770 8.228464 GCGCTCCTTTCCTTGTATATTTATTAC 58.772 37.037 0.00 0.00 0.00 1.89
770 771 7.934665 TGCGCTCCTTTCCTTGTATATTTATTA 59.065 33.333 9.73 0.00 0.00 0.98
771 772 6.770785 TGCGCTCCTTTCCTTGTATATTTATT 59.229 34.615 9.73 0.00 0.00 1.40
772 773 6.296026 TGCGCTCCTTTCCTTGTATATTTAT 58.704 36.000 9.73 0.00 0.00 1.40
773 774 5.676552 TGCGCTCCTTTCCTTGTATATTTA 58.323 37.500 9.73 0.00 0.00 1.40
774 775 4.523083 TGCGCTCCTTTCCTTGTATATTT 58.477 39.130 9.73 0.00 0.00 1.40
775 776 4.150897 TGCGCTCCTTTCCTTGTATATT 57.849 40.909 9.73 0.00 0.00 1.28
776 777 3.838244 TGCGCTCCTTTCCTTGTATAT 57.162 42.857 9.73 0.00 0.00 0.86
777 778 3.838244 ATGCGCTCCTTTCCTTGTATA 57.162 42.857 9.73 0.00 0.00 1.47
778 779 2.717639 ATGCGCTCCTTTCCTTGTAT 57.282 45.000 9.73 0.00 0.00 2.29
779 780 2.489938 AATGCGCTCCTTTCCTTGTA 57.510 45.000 9.73 0.00 0.00 2.41
780 781 1.541588 GAAATGCGCTCCTTTCCTTGT 59.458 47.619 9.73 0.00 0.00 3.16
781 782 1.466360 CGAAATGCGCTCCTTTCCTTG 60.466 52.381 9.73 0.11 0.00 3.61
782 783 0.804989 CGAAATGCGCTCCTTTCCTT 59.195 50.000 9.73 0.00 0.00 3.36
783 784 2.471255 CGAAATGCGCTCCTTTCCT 58.529 52.632 9.73 0.00 0.00 3.36
1031 1032 2.364842 ATGAGGGCGAGGACAGCT 60.365 61.111 0.00 0.00 34.52 4.24
1122 1123 3.095163 AGAGGGCCATGCTCAGGG 61.095 66.667 6.18 0.00 34.91 4.45
1735 1742 1.578897 TGGAGGCCTAGCACACATAA 58.421 50.000 4.42 0.00 0.00 1.90
1927 1934 0.539051 CCCTCAAGCTTCTGGTCGAT 59.461 55.000 0.00 0.00 0.00 3.59
1968 1975 3.395607 TCTCAATACCATAGGCCATGCTT 59.604 43.478 5.01 0.00 32.84 3.91
2007 2014 0.390472 GGCTGCGCTTAGACTTGACT 60.390 55.000 9.73 0.00 0.00 3.41
2160 2167 4.637534 AGATGTTCAGCTGCACGATAATTT 59.362 37.500 9.47 0.00 0.00 1.82
2169 2176 3.076621 CACCTTAAGATGTTCAGCTGCA 58.923 45.455 9.47 2.06 0.00 4.41
2260 2267 9.828039 ATCATCGACATCATTATATAGTGCAAT 57.172 29.630 0.46 0.00 0.00 3.56
2555 2562 0.391263 CCGGAACACCTCAAGCCTAC 60.391 60.000 0.00 0.00 0.00 3.18
2811 2818 2.208431 GCCCTTGAGACATCAATCGAG 58.792 52.381 0.00 0.00 44.32 4.04
3054 3061 9.804758 TTACGAAAATGTTACACAAAGGAAAAT 57.195 25.926 0.00 0.00 0.00 1.82
3105 3112 5.414360 CAGAGTAACTTCTAGCAGCAATCA 58.586 41.667 0.00 0.00 0.00 2.57
3194 3201 7.433708 TGTGATGAATGACATAAAAACGACT 57.566 32.000 0.00 0.00 39.56 4.18
3195 3202 8.673626 AATGTGATGAATGACATAAAAACGAC 57.326 30.769 0.00 0.00 39.56 4.34
3273 3282 2.137523 GAACAAACCGCGAAGGAAGTA 58.862 47.619 8.23 0.00 45.00 2.24
3351 3360 6.292919 GGCTTGACCATAAAAAGCTAGATACG 60.293 42.308 6.58 0.00 44.54 3.06
3352 3361 6.768381 AGGCTTGACCATAAAAAGCTAGATAC 59.232 38.462 6.58 0.00 44.54 2.24
3354 3363 5.591877 CAGGCTTGACCATAAAAAGCTAGAT 59.408 40.000 6.58 0.00 44.54 1.98
3355 3364 4.943705 CAGGCTTGACCATAAAAAGCTAGA 59.056 41.667 6.58 0.00 44.54 2.43
3358 3367 3.500343 ACAGGCTTGACCATAAAAAGCT 58.500 40.909 1.40 0.00 44.54 3.74
3359 3368 3.942130 ACAGGCTTGACCATAAAAAGC 57.058 42.857 1.40 0.00 44.43 3.51
3360 3369 6.981722 ACTAAACAGGCTTGACCATAAAAAG 58.018 36.000 1.40 0.00 43.14 2.27
3361 3370 6.969993 ACTAAACAGGCTTGACCATAAAAA 57.030 33.333 1.40 0.00 43.14 1.94
3362 3371 6.969993 AACTAAACAGGCTTGACCATAAAA 57.030 33.333 1.40 0.00 43.14 1.52
3363 3372 6.969993 AAACTAAACAGGCTTGACCATAAA 57.030 33.333 1.40 0.00 43.14 1.40
3364 3373 6.775629 AGAAAACTAAACAGGCTTGACCATAA 59.224 34.615 1.40 0.00 43.14 1.90
3444 3453 7.226918 ACTGTTTATCATGCTCATCAATCTCTG 59.773 37.037 0.00 0.00 0.00 3.35
3701 3712 5.766150 TGTCCCAACACAAATAACTTGAG 57.234 39.130 0.00 0.00 38.50 3.02
3776 3787 8.774586 GCTGTGTCGATACCATCTTAATAATTT 58.225 33.333 10.00 0.00 0.00 1.82
3777 3788 8.150945 AGCTGTGTCGATACCATCTTAATAATT 58.849 33.333 10.00 0.00 0.00 1.40
3778 3789 7.671302 AGCTGTGTCGATACCATCTTAATAAT 58.329 34.615 10.00 0.00 0.00 1.28
3779 3790 7.050970 AGCTGTGTCGATACCATCTTAATAA 57.949 36.000 10.00 0.00 0.00 1.40
3780 3791 6.650427 AGCTGTGTCGATACCATCTTAATA 57.350 37.500 10.00 0.00 0.00 0.98
3781 3792 5.537300 AGCTGTGTCGATACCATCTTAAT 57.463 39.130 10.00 0.00 0.00 1.40
3782 3793 6.459670 TTAGCTGTGTCGATACCATCTTAA 57.540 37.500 10.00 0.00 0.00 1.85
3783 3794 6.459670 TTTAGCTGTGTCGATACCATCTTA 57.540 37.500 10.00 0.00 0.00 2.10
3784 3795 5.339008 TTTAGCTGTGTCGATACCATCTT 57.661 39.130 10.00 0.00 0.00 2.40
3785 3796 5.339008 TTTTAGCTGTGTCGATACCATCT 57.661 39.130 10.00 6.58 0.00 2.90
3786 3797 7.307219 GGTTATTTTAGCTGTGTCGATACCATC 60.307 40.741 10.00 0.00 0.00 3.51
3787 3798 6.482308 GGTTATTTTAGCTGTGTCGATACCAT 59.518 38.462 10.00 0.00 0.00 3.55
3788 3799 5.813672 GGTTATTTTAGCTGTGTCGATACCA 59.186 40.000 10.00 0.00 0.00 3.25
3789 3800 5.051240 CGGTTATTTTAGCTGTGTCGATACC 60.051 44.000 10.00 0.00 0.00 2.73
3790 3801 5.745294 TCGGTTATTTTAGCTGTGTCGATAC 59.255 40.000 5.21 5.21 0.00 2.24
3791 3802 5.893687 TCGGTTATTTTAGCTGTGTCGATA 58.106 37.500 0.00 0.00 0.00 2.92
3792 3803 4.751060 TCGGTTATTTTAGCTGTGTCGAT 58.249 39.130 0.00 0.00 0.00 3.59
3793 3804 4.082625 TCTCGGTTATTTTAGCTGTGTCGA 60.083 41.667 0.00 0.00 0.00 4.20
3794 3805 4.171005 TCTCGGTTATTTTAGCTGTGTCG 58.829 43.478 0.00 0.00 0.00 4.35
3795 3806 5.867716 TCTTCTCGGTTATTTTAGCTGTGTC 59.132 40.000 0.00 0.00 0.00 3.67
3796 3807 5.790593 TCTTCTCGGTTATTTTAGCTGTGT 58.209 37.500 0.00 0.00 0.00 3.72
3797 3808 6.721571 TTCTTCTCGGTTATTTTAGCTGTG 57.278 37.500 0.00 0.00 0.00 3.66
3798 3809 6.183360 GCATTCTTCTCGGTTATTTTAGCTGT 60.183 38.462 0.00 0.00 0.00 4.40
3799 3810 6.183360 TGCATTCTTCTCGGTTATTTTAGCTG 60.183 38.462 0.00 0.00 0.00 4.24
3800 3811 5.880332 TGCATTCTTCTCGGTTATTTTAGCT 59.120 36.000 0.00 0.00 0.00 3.32
3801 3812 5.965918 GTGCATTCTTCTCGGTTATTTTAGC 59.034 40.000 0.00 0.00 0.00 3.09
3802 3813 7.072177 TGTGCATTCTTCTCGGTTATTTTAG 57.928 36.000 0.00 0.00 0.00 1.85
3803 3814 7.552687 AGATGTGCATTCTTCTCGGTTATTTTA 59.447 33.333 0.00 0.00 0.00 1.52
3804 3815 5.957842 TGTGCATTCTTCTCGGTTATTTT 57.042 34.783 0.00 0.00 0.00 1.82
3805 3816 5.882557 AGATGTGCATTCTTCTCGGTTATTT 59.117 36.000 0.00 0.00 0.00 1.40
3806 3817 5.431765 AGATGTGCATTCTTCTCGGTTATT 58.568 37.500 0.00 0.00 0.00 1.40
3807 3818 5.028549 AGATGTGCATTCTTCTCGGTTAT 57.971 39.130 0.00 0.00 0.00 1.89
3808 3819 4.081697 TGAGATGTGCATTCTTCTCGGTTA 60.082 41.667 12.63 0.00 39.73 2.85
3809 3820 3.265791 GAGATGTGCATTCTTCTCGGTT 58.734 45.455 3.90 0.00 32.09 4.44
3810 3821 2.234661 TGAGATGTGCATTCTTCTCGGT 59.765 45.455 12.63 0.00 39.73 4.69
3811 3822 2.864946 CTGAGATGTGCATTCTTCTCGG 59.135 50.000 12.04 12.04 39.73 4.63
3812 3823 2.284684 GCTGAGATGTGCATTCTTCTCG 59.715 50.000 12.63 9.71 39.73 4.04
3813 3824 3.533547 AGCTGAGATGTGCATTCTTCTC 58.466 45.455 11.28 11.28 38.37 2.87
3814 3825 3.630892 AGCTGAGATGTGCATTCTTCT 57.369 42.857 3.90 0.00 0.00 2.85
3815 3826 4.633126 TGTTAGCTGAGATGTGCATTCTTC 59.367 41.667 0.00 0.00 0.00 2.87
3816 3827 4.394300 GTGTTAGCTGAGATGTGCATTCTT 59.606 41.667 0.00 0.00 0.00 2.52
3817 3828 3.937706 GTGTTAGCTGAGATGTGCATTCT 59.062 43.478 0.00 2.06 0.00 2.40
3818 3829 3.686241 TGTGTTAGCTGAGATGTGCATTC 59.314 43.478 0.00 0.00 0.00 2.67
3819 3830 3.438087 GTGTGTTAGCTGAGATGTGCATT 59.562 43.478 0.00 0.00 0.00 3.56
3820 3831 3.005554 GTGTGTTAGCTGAGATGTGCAT 58.994 45.455 0.00 0.00 0.00 3.96
3821 3832 2.224257 TGTGTGTTAGCTGAGATGTGCA 60.224 45.455 0.00 0.00 0.00 4.57
3822 3833 2.416747 TGTGTGTTAGCTGAGATGTGC 58.583 47.619 0.00 0.00 0.00 4.57
3823 3834 4.248058 TGATGTGTGTTAGCTGAGATGTG 58.752 43.478 0.00 0.00 0.00 3.21
3824 3835 4.541973 TGATGTGTGTTAGCTGAGATGT 57.458 40.909 0.00 0.00 0.00 3.06
3825 3836 6.279123 AGTATGATGTGTGTTAGCTGAGATG 58.721 40.000 0.00 0.00 0.00 2.90
3826 3837 6.477053 AGTATGATGTGTGTTAGCTGAGAT 57.523 37.500 0.00 0.00 0.00 2.75
3827 3838 5.921962 AGTATGATGTGTGTTAGCTGAGA 57.078 39.130 0.00 0.00 0.00 3.27
3828 3839 6.580416 CGATAGTATGATGTGTGTTAGCTGAG 59.420 42.308 0.00 0.00 0.00 3.35
3829 3840 6.262273 TCGATAGTATGATGTGTGTTAGCTGA 59.738 38.462 0.00 0.00 37.40 4.26
3830 3841 6.438763 TCGATAGTATGATGTGTGTTAGCTG 58.561 40.000 0.00 0.00 37.40 4.24
3831 3842 6.635030 TCGATAGTATGATGTGTGTTAGCT 57.365 37.500 0.00 0.00 37.40 3.32
3832 3843 6.695713 TGTTCGATAGTATGATGTGTGTTAGC 59.304 38.462 0.00 0.00 37.40 3.09
3833 3844 7.700656 TGTGTTCGATAGTATGATGTGTGTTAG 59.299 37.037 0.00 0.00 37.40 2.34
3834 3845 7.540299 TGTGTTCGATAGTATGATGTGTGTTA 58.460 34.615 0.00 0.00 37.40 2.41
3835 3846 6.394809 TGTGTTCGATAGTATGATGTGTGTT 58.605 36.000 0.00 0.00 37.40 3.32
3836 3847 5.961272 TGTGTTCGATAGTATGATGTGTGT 58.039 37.500 0.00 0.00 37.40 3.72
3837 3848 6.885735 TTGTGTTCGATAGTATGATGTGTG 57.114 37.500 0.00 0.00 37.40 3.82
3838 3849 9.764363 ATTATTGTGTTCGATAGTATGATGTGT 57.236 29.630 0.00 0.00 37.40 3.72
3933 3944 4.225267 CCTCCTAACCATTCAACTACTGGT 59.775 45.833 0.00 0.00 45.08 4.00
3934 3945 4.384208 CCCTCCTAACCATTCAACTACTGG 60.384 50.000 0.00 0.00 36.09 4.00
3935 3946 4.225267 ACCCTCCTAACCATTCAACTACTG 59.775 45.833 0.00 0.00 0.00 2.74
3936 3947 4.436079 ACCCTCCTAACCATTCAACTACT 58.564 43.478 0.00 0.00 0.00 2.57
3937 3948 4.838904 ACCCTCCTAACCATTCAACTAC 57.161 45.455 0.00 0.00 0.00 2.73
3938 3949 4.600111 ACAACCCTCCTAACCATTCAACTA 59.400 41.667 0.00 0.00 0.00 2.24
3939 3950 3.397955 ACAACCCTCCTAACCATTCAACT 59.602 43.478 0.00 0.00 0.00 3.16
3940 3951 3.506067 CACAACCCTCCTAACCATTCAAC 59.494 47.826 0.00 0.00 0.00 3.18
3941 3952 3.499563 CCACAACCCTCCTAACCATTCAA 60.500 47.826 0.00 0.00 0.00 2.69
3942 3953 2.041081 CCACAACCCTCCTAACCATTCA 59.959 50.000 0.00 0.00 0.00 2.57
3943 3954 2.041216 ACCACAACCCTCCTAACCATTC 59.959 50.000 0.00 0.00 0.00 2.67
3944 3955 2.070573 ACCACAACCCTCCTAACCATT 58.929 47.619 0.00 0.00 0.00 3.16
3945 3956 1.755200 ACCACAACCCTCCTAACCAT 58.245 50.000 0.00 0.00 0.00 3.55
3946 3957 1.980036 GTACCACAACCCTCCTAACCA 59.020 52.381 0.00 0.00 0.00 3.67
3947 3958 1.280133 GGTACCACAACCCTCCTAACC 59.720 57.143 7.15 0.00 33.02 2.85
3948 3959 2.775911 GGTACCACAACCCTCCTAAC 57.224 55.000 7.15 0.00 33.02 2.34
3963 3974 2.632377 CACTCACACATGGATGGGTAC 58.368 52.381 3.85 0.00 43.88 3.34
3964 3975 1.065491 GCACTCACACATGGATGGGTA 60.065 52.381 3.85 0.00 43.88 3.69
3966 3977 0.322726 TGCACTCACACATGGATGGG 60.323 55.000 0.00 0.00 37.19 4.00
3967 3978 1.758936 ATGCACTCACACATGGATGG 58.241 50.000 0.00 0.00 0.00 3.51
3968 3979 3.943381 ACTTATGCACTCACACATGGATG 59.057 43.478 0.00 0.00 0.00 3.51
3969 3980 3.943381 CACTTATGCACTCACACATGGAT 59.057 43.478 0.00 0.00 0.00 3.41
3970 3981 3.244526 ACACTTATGCACTCACACATGGA 60.245 43.478 0.00 0.00 0.00 3.41
3971 3982 3.076621 ACACTTATGCACTCACACATGG 58.923 45.455 0.00 0.00 0.00 3.66
3972 3983 3.120095 CCACACTTATGCACTCACACATG 60.120 47.826 0.00 0.00 0.00 3.21
3973 3984 3.076621 CCACACTTATGCACTCACACAT 58.923 45.455 0.00 0.00 0.00 3.21
3974 3985 2.158827 ACCACACTTATGCACTCACACA 60.159 45.455 0.00 0.00 0.00 3.72
3975 3986 2.224079 CACCACACTTATGCACTCACAC 59.776 50.000 0.00 0.00 0.00 3.82
3976 3987 2.493035 CACCACACTTATGCACTCACA 58.507 47.619 0.00 0.00 0.00 3.58
3977 3988 1.806542 CCACCACACTTATGCACTCAC 59.193 52.381 0.00 0.00 0.00 3.51
3978 3989 1.419762 ACCACCACACTTATGCACTCA 59.580 47.619 0.00 0.00 0.00 3.41
3979 3990 1.806542 CACCACCACACTTATGCACTC 59.193 52.381 0.00 0.00 0.00 3.51
3980 3991 1.545428 CCACCACCACACTTATGCACT 60.545 52.381 0.00 0.00 0.00 4.40
3981 3992 0.881118 CCACCACCACACTTATGCAC 59.119 55.000 0.00 0.00 0.00 4.57
3982 3993 0.476338 ACCACCACCACACTTATGCA 59.524 50.000 0.00 0.00 0.00 3.96
3983 3994 0.881118 CACCACCACCACACTTATGC 59.119 55.000 0.00 0.00 0.00 3.14
3984 3995 1.202879 ACCACCACCACCACACTTATG 60.203 52.381 0.00 0.00 0.00 1.90
3985 3996 1.145571 ACCACCACCACCACACTTAT 58.854 50.000 0.00 0.00 0.00 1.73
3986 3997 0.181587 CACCACCACCACCACACTTA 59.818 55.000 0.00 0.00 0.00 2.24
3987 3998 1.077068 CACCACCACCACCACACTT 60.077 57.895 0.00 0.00 0.00 3.16
3988 3999 2.595095 CACCACCACCACCACACT 59.405 61.111 0.00 0.00 0.00 3.55
3989 4000 2.518349 CCACCACCACCACCACAC 60.518 66.667 0.00 0.00 0.00 3.82
3990 4001 3.018193 ACCACCACCACCACCACA 61.018 61.111 0.00 0.00 0.00 4.17
3991 4002 2.351924 ATCACCACCACCACCACCAC 62.352 60.000 0.00 0.00 0.00 4.16
3992 4003 2.081787 ATCACCACCACCACCACCA 61.082 57.895 0.00 0.00 0.00 4.17
3993 4004 1.603455 CATCACCACCACCACCACC 60.603 63.158 0.00 0.00 0.00 4.61
3994 4005 0.398696 TACATCACCACCACCACCAC 59.601 55.000 0.00 0.00 0.00 4.16
3995 4006 0.398696 GTACATCACCACCACCACCA 59.601 55.000 0.00 0.00 0.00 4.17
3996 4007 0.398696 TGTACATCACCACCACCACC 59.601 55.000 0.00 0.00 0.00 4.61
3997 4008 2.489938 ATGTACATCACCACCACCAC 57.510 50.000 1.41 0.00 0.00 4.16
3998 4009 2.907042 TGTATGTACATCACCACCACCA 59.093 45.455 12.68 0.00 0.00 4.17
3999 4010 3.055385 AGTGTATGTACATCACCACCACC 60.055 47.826 23.34 8.11 38.63 4.61
4000 4011 4.202245 AGTGTATGTACATCACCACCAC 57.798 45.455 23.34 16.36 38.63 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.