Multiple sequence alignment - TraesCS2B01G253200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G253200 chr2B 100.000 4620 0 0 1 4620 273739371 273734752 0.000000e+00 8532.0
1 TraesCS2B01G253200 chr2B 100.000 38 0 0 4252 4289 273735084 273735047 2.310000e-08 71.3
2 TraesCS2B01G253200 chr2B 100.000 38 0 0 4288 4325 273735120 273735083 2.310000e-08 71.3
3 TraesCS2B01G253200 chr2D 94.251 4279 145 43 1 4265 267702620 267706811 0.000000e+00 6445.0
4 TraesCS2B01G253200 chr2D 94.872 234 11 1 4388 4620 521074222 521074455 9.450000e-97 364.0
5 TraesCS2B01G253200 chr2D 96.250 80 2 1 4309 4387 606188920 606188841 3.750000e-26 130.0
6 TraesCS2B01G253200 chr2A 94.698 2018 75 20 2147 4152 352437502 352439499 0.000000e+00 3105.0
7 TraesCS2B01G253200 chr2A 96.344 1395 40 8 755 2148 352436038 352437422 0.000000e+00 2283.0
8 TraesCS2B01G253200 chr2A 95.823 407 15 1 1 405 352430343 352430749 0.000000e+00 656.0
9 TraesCS2B01G253200 chr2A 92.691 301 18 3 441 739 352435756 352436054 9.180000e-117 431.0
10 TraesCS2B01G253200 chr4A 99.571 233 1 0 4388 4620 274550665 274550897 4.270000e-115 425.0
11 TraesCS2B01G253200 chr4A 98.649 74 1 0 4309 4382 619148430 619148357 1.040000e-26 132.0
12 TraesCS2B01G253200 chr4A 95.062 81 2 2 4309 4389 703657426 703657348 4.850000e-25 126.0
13 TraesCS2B01G253200 chr7A 94.894 235 11 1 4387 4620 306602630 306602864 2.630000e-97 366.0
14 TraesCS2B01G253200 chr7A 89.316 234 25 0 2027 2260 367009909 367009676 1.260000e-75 294.0
15 TraesCS2B01G253200 chr6A 94.872 234 11 1 4388 4620 235369972 235370205 9.450000e-97 364.0
16 TraesCS2B01G253200 chr6A 93.443 244 14 2 4379 4620 351609148 351609391 1.220000e-95 361.0
17 TraesCS2B01G253200 chr5D 94.872 234 11 1 4388 4620 152392120 152392353 9.450000e-97 364.0
18 TraesCS2B01G253200 chr5D 96.154 78 3 0 4309 4386 447632089 447632166 1.350000e-25 128.0
19 TraesCS2B01G253200 chr3D 94.872 234 11 1 4388 4620 595565650 595565883 9.450000e-97 364.0
20 TraesCS2B01G253200 chr3D 96.203 79 3 0 4309 4387 51673693 51673615 3.750000e-26 130.0
21 TraesCS2B01G253200 chr6D 94.468 235 11 2 4388 4620 23829187 23828953 1.220000e-95 361.0
22 TraesCS2B01G253200 chr1B 94.444 234 12 1 4388 4620 350734644 350734411 4.400000e-95 359.0
23 TraesCS2B01G253200 chr5A 89.143 175 16 3 2024 2195 552384717 552384543 1.010000e-51 215.0
24 TraesCS2B01G253200 chr5A 95.062 81 3 1 4309 4389 39735707 39735786 4.850000e-25 126.0
25 TraesCS2B01G253200 chr4D 91.667 108 9 0 2022 2129 6805500 6805607 2.880000e-32 150.0
26 TraesCS2B01G253200 chr6B 98.667 75 1 0 4309 4383 706113285 706113359 2.900000e-27 134.0
27 TraesCS2B01G253200 chr7B 98.649 74 1 0 4309 4382 14874935 14874862 1.040000e-26 132.0
28 TraesCS2B01G253200 chrUn 96.250 80 2 1 4309 4387 108733808 108733887 3.750000e-26 130.0
29 TraesCS2B01G253200 chr5B 75.203 246 49 11 2023 2262 596671418 596671179 6.320000e-19 106.0
30 TraesCS2B01G253200 chr4B 100.000 31 0 0 2054 2084 574005144 574005174 1.800000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G253200 chr2B 273734752 273739371 4619 True 8532.000000 8532 100.000000 1 4620 1 chr2B.!!$R1 4619
1 TraesCS2B01G253200 chr2D 267702620 267706811 4191 False 6445.000000 6445 94.251000 1 4265 1 chr2D.!!$F1 4264
2 TraesCS2B01G253200 chr2A 352435756 352439499 3743 False 1939.666667 3105 94.577667 441 4152 3 chr2A.!!$F2 3711

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
390 391 0.617820 TGTGGGACCCTCTAGAAGCC 60.618 60.000 13.00 0.0 0.0 4.35 F
1844 1851 0.179702 CTGCTAGCATCTTCAGGCCA 59.820 55.000 19.72 0.0 0.0 5.36 F
1846 1853 1.213678 TGCTAGCATCTTCAGGCCATT 59.786 47.619 14.93 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2240 2328 0.752658 GGGGCTGTTTGGATATTGCC 59.247 55.0 0.0 0.0 39.61 4.52 R
2909 2999 0.737219 GCTTGGCACATCAGACCATC 59.263 55.0 0.0 0.0 39.30 3.51 R
3806 3898 1.981256 TGAAAACTGAAGGGAGCACC 58.019 50.0 0.0 0.0 40.67 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 0.647410 CTGTAAGAGTGCAATCGCCG 59.353 55.000 8.74 0.00 33.56 6.46
116 117 5.392767 AGACATGAGACGATGTTGTAACT 57.607 39.130 0.00 0.00 36.67 2.24
167 168 2.361119 GGACCTCTGTTTCCAAAACCAC 59.639 50.000 0.48 0.00 0.00 4.16
169 170 1.686587 CCTCTGTTTCCAAAACCACCC 59.313 52.381 0.48 0.00 0.00 4.61
245 246 7.432350 AGATATTTCTTCCGCAAATCTGATC 57.568 36.000 0.00 0.00 0.00 2.92
252 253 2.035832 TCCGCAAATCTGATCGCTATGA 59.964 45.455 9.48 2.72 0.00 2.15
390 391 0.617820 TGTGGGACCCTCTAGAAGCC 60.618 60.000 13.00 0.00 0.00 4.35
402 403 5.548056 CCCTCTAGAAGCCCCTTCAAATATA 59.452 44.000 7.62 0.00 42.37 0.86
403 404 6.044404 CCCTCTAGAAGCCCCTTCAAATATAA 59.956 42.308 7.62 0.00 42.37 0.98
404 405 7.164803 CCTCTAGAAGCCCCTTCAAATATAAG 58.835 42.308 7.62 0.00 42.37 1.73
405 406 6.534634 TCTAGAAGCCCCTTCAAATATAAGC 58.465 40.000 7.62 0.00 42.37 3.09
406 407 4.137543 AGAAGCCCCTTCAAATATAAGCG 58.862 43.478 7.62 0.00 42.37 4.68
407 408 3.577805 AGCCCCTTCAAATATAAGCGT 57.422 42.857 0.00 0.00 0.00 5.07
408 409 4.699925 AGCCCCTTCAAATATAAGCGTA 57.300 40.909 0.00 0.00 0.00 4.42
409 410 4.642429 AGCCCCTTCAAATATAAGCGTAG 58.358 43.478 0.00 0.00 0.00 3.51
410 411 4.347000 AGCCCCTTCAAATATAAGCGTAGA 59.653 41.667 0.00 0.00 0.00 2.59
411 412 4.691216 GCCCCTTCAAATATAAGCGTAGAG 59.309 45.833 0.00 0.00 0.00 2.43
487 488 1.683441 CCCTGCCGGAAAACCTAGT 59.317 57.895 5.05 0.00 0.00 2.57
520 521 2.031465 CCGGCAGTTGTTACCCGT 59.969 61.111 0.00 0.00 39.12 5.28
593 595 1.905894 GTCTCCCTCCTTTGCTTCTCT 59.094 52.381 0.00 0.00 0.00 3.10
786 789 2.030805 AGATTTGCGTGAAACAGAAGGC 60.031 45.455 0.00 0.00 35.74 4.35
940 944 2.173519 CCAATTCATTCAGCACCCACT 58.826 47.619 0.00 0.00 0.00 4.00
990 996 2.045242 TGTCCGACGAGGGAGGAG 60.045 66.667 0.00 0.00 41.52 3.69
1378 1384 1.463444 CGATCTTTCGGCCGTTTTTCT 59.537 47.619 27.15 6.82 41.74 2.52
1400 1406 2.148446 TTTCGGTCGGAGATTAGGGA 57.852 50.000 0.00 0.00 40.67 4.20
1485 1492 2.034104 GGTTAGGAACCCCGAATGTC 57.966 55.000 0.00 0.00 46.12 3.06
1657 1664 1.834263 GATGTCTCTGTGGGTAAGCCT 59.166 52.381 0.00 0.00 34.45 4.58
1678 1685 4.338879 CTGATCATTCCAAACCTCACCTT 58.661 43.478 0.00 0.00 0.00 3.50
1844 1851 0.179702 CTGCTAGCATCTTCAGGCCA 59.820 55.000 19.72 0.00 0.00 5.36
1846 1853 1.213678 TGCTAGCATCTTCAGGCCATT 59.786 47.619 14.93 0.00 0.00 3.16
1870 1877 5.517322 AATTCTTAGTGGCGTCCTAGTAG 57.483 43.478 0.00 0.00 0.00 2.57
1885 1892 7.921745 GCGTCCTAGTAGACTTCTATGATTTTT 59.078 37.037 0.00 0.00 34.46 1.94
1965 1972 5.765182 TGTTTTTCTTCTCCCAAGCTTCTAG 59.235 40.000 0.00 0.00 0.00 2.43
2036 2043 7.483307 TCATATTTTGCATTTAGAGGCTGTTC 58.517 34.615 0.00 0.00 32.80 3.18
2037 2044 4.519540 TTTTGCATTTAGAGGCTGTTCC 57.480 40.909 0.00 0.00 32.80 3.62
2043 2050 3.973206 TTTAGAGGCTGTTCCGATTGA 57.027 42.857 0.00 0.00 40.77 2.57
2178 2266 2.044946 CCAACTACTGGCCAGGGC 60.045 66.667 35.42 5.91 38.76 5.19
2240 2328 1.610522 GCATTGGCAGGGTTAGCATAG 59.389 52.381 0.00 0.00 40.72 2.23
2249 2337 4.265073 CAGGGTTAGCATAGGCAATATCC 58.735 47.826 0.67 0.00 44.61 2.59
2376 2464 8.161425 GGATTTAGGACAATAGGGCTACATTTA 58.839 37.037 0.00 0.00 0.00 1.40
2377 2465 9.740710 GATTTAGGACAATAGGGCTACATTTAT 57.259 33.333 0.00 0.00 0.00 1.40
2434 2522 2.366266 ACCGTTGCTACAGTAGTTGGAA 59.634 45.455 9.42 0.00 0.00 3.53
2478 2566 1.828595 TGCCCTCGCTGACATTAACTA 59.171 47.619 0.00 0.00 35.36 2.24
2481 2569 3.877508 GCCCTCGCTGACATTAACTAATT 59.122 43.478 0.00 0.00 0.00 1.40
2708 2796 7.224949 GTCATGAGTTGCTTAAATACTACTCCC 59.775 40.741 0.00 0.00 37.71 4.30
2771 2859 9.896263 GCCAGTTACTACTCATAGTATAACTTC 57.104 37.037 13.39 8.78 42.31 3.01
2850 2940 2.540383 ACTGGGAGTAGAACATGCTCA 58.460 47.619 0.00 0.00 42.07 4.26
2909 2999 0.804989 GACGGCCAGAAGGTGAATTG 59.195 55.000 2.24 0.00 37.19 2.32
2922 3012 4.267536 AGGTGAATTGATGGTCTGATGTG 58.732 43.478 0.00 0.00 0.00 3.21
2996 3086 6.681729 ACCTAGTGTCTTTGGTTATCTGAA 57.318 37.500 0.00 0.00 0.00 3.02
2998 3088 7.690256 ACCTAGTGTCTTTGGTTATCTGAATT 58.310 34.615 0.00 0.00 0.00 2.17
3109 3199 8.301252 AGTAATTTTGGTGTTTGAGGTAAGTT 57.699 30.769 0.00 0.00 0.00 2.66
3110 3200 8.410912 AGTAATTTTGGTGTTTGAGGTAAGTTC 58.589 33.333 0.00 0.00 0.00 3.01
3125 3215 5.536161 AGGTAAGTTCATTTTGTGATGCTGT 59.464 36.000 0.00 0.00 36.54 4.40
3165 3255 7.232118 AGGTCGGAGAATGATTTTCAAATTT 57.768 32.000 0.00 0.00 39.69 1.82
3196 3287 4.214119 TGATTCCTAAATGCTTATGCTCGC 59.786 41.667 1.96 0.00 40.48 5.03
3197 3288 3.475566 TCCTAAATGCTTATGCTCGCT 57.524 42.857 1.96 0.00 40.48 4.93
3220 3311 7.413438 CGCTTAAAGTGCTACTCTTGATCATTT 60.413 37.037 0.00 0.00 0.00 2.32
3376 3467 3.000727 GCCTGGTGTTATGTCTGTACAC 58.999 50.000 0.00 0.00 38.78 2.90
3695 3786 3.411446 TGAAGTCCGCAAACTCATGAAT 58.589 40.909 0.00 0.00 0.00 2.57
3711 3802 5.960704 TCATGAATGAGGATGGATGGAATT 58.039 37.500 0.00 0.00 32.11 2.17
3806 3898 4.314740 TTTTCCTGTGTTCCAAAATCCG 57.685 40.909 0.00 0.00 0.00 4.18
3812 3904 1.068541 GTGTTCCAAAATCCGGTGCTC 60.069 52.381 0.00 0.00 0.00 4.26
3831 3923 4.520492 TGCTCCCTTCAGTTTTCATTTCTC 59.480 41.667 0.00 0.00 0.00 2.87
3832 3924 4.520492 GCTCCCTTCAGTTTTCATTTCTCA 59.480 41.667 0.00 0.00 0.00 3.27
3833 3925 5.335504 GCTCCCTTCAGTTTTCATTTCTCAG 60.336 44.000 0.00 0.00 0.00 3.35
3836 3928 6.039717 TCCCTTCAGTTTTCATTTCTCAGTTG 59.960 38.462 0.00 0.00 0.00 3.16
3837 3929 6.183360 CCCTTCAGTTTTCATTTCTCAGTTGT 60.183 38.462 0.00 0.00 0.00 3.32
3838 3930 6.694411 CCTTCAGTTTTCATTTCTCAGTTGTG 59.306 38.462 0.00 0.00 0.00 3.33
3839 3931 7.389803 TTCAGTTTTCATTTCTCAGTTGTGA 57.610 32.000 0.00 0.00 0.00 3.58
3840 3932 6.785191 TCAGTTTTCATTTCTCAGTTGTGAC 58.215 36.000 0.00 0.00 0.00 3.67
3841 3933 6.599244 TCAGTTTTCATTTCTCAGTTGTGACT 59.401 34.615 0.00 0.00 36.25 3.41
3842 3934 7.121168 TCAGTTTTCATTTCTCAGTTGTGACTT 59.879 33.333 0.00 0.00 32.54 3.01
3843 3935 7.219535 CAGTTTTCATTTCTCAGTTGTGACTTG 59.780 37.037 0.00 0.00 32.54 3.16
3844 3936 7.121168 AGTTTTCATTTCTCAGTTGTGACTTGA 59.879 33.333 0.00 0.00 32.54 3.02
3845 3937 7.389803 TTTCATTTCTCAGTTGTGACTTGAA 57.610 32.000 0.00 4.92 32.54 2.69
3988 4080 4.688021 TGTGCAAGTTTTTATCAACCCAC 58.312 39.130 0.00 0.00 0.00 4.61
3991 4083 3.978855 GCAAGTTTTTATCAACCCACGAC 59.021 43.478 0.00 0.00 0.00 4.34
4023 4117 7.169158 TGTCATGTTCTGTGTATCTGTGATA 57.831 36.000 0.00 0.00 0.00 2.15
4053 4147 3.242316 CCTCGCTAAAACGTATGAAAGGC 60.242 47.826 0.00 0.00 0.00 4.35
4059 4153 2.373540 AACGTATGAAAGGCACGCTA 57.626 45.000 0.00 0.00 39.23 4.26
4060 4154 1.636988 ACGTATGAAAGGCACGCTAC 58.363 50.000 0.00 0.00 39.23 3.58
4061 4155 0.928229 CGTATGAAAGGCACGCTACC 59.072 55.000 0.00 0.00 0.00 3.18
4090 4188 3.938334 GGCTGAGAGGAAAAAGAAGCTAG 59.062 47.826 0.00 0.00 0.00 3.42
4101 4199 8.379331 AGGAAAAAGAAGCTAGAGTAGTCATTT 58.621 33.333 0.00 0.00 0.00 2.32
4136 4235 1.014044 ATCTGTTACGTGGTGCGCTG 61.014 55.000 9.73 0.00 46.11 5.18
4202 4301 4.201792 GCTGTACTGAGATTCATGCAGTTG 60.202 45.833 8.01 0.00 42.40 3.16
4208 4307 3.890756 TGAGATTCATGCAGTTGGTTGTT 59.109 39.130 0.00 0.00 0.00 2.83
4222 4321 6.642131 CAGTTGGTTGTTTTCTCATTGGTATG 59.358 38.462 0.00 0.00 0.00 2.39
4224 4323 4.165779 GGTTGTTTTCTCATTGGTATGCG 58.834 43.478 0.00 0.00 0.00 4.73
4228 4327 3.342377 TTTCTCATTGGTATGCGGACA 57.658 42.857 0.00 0.00 0.00 4.02
4261 4361 4.047822 CCAGTCTTGACGAGCAGATATTC 58.952 47.826 0.00 0.00 0.00 1.75
4265 4365 5.009210 AGTCTTGACGAGCAGATATTCCTAC 59.991 44.000 0.00 0.00 0.00 3.18
4266 4366 4.887655 TCTTGACGAGCAGATATTCCTACA 59.112 41.667 0.00 0.00 0.00 2.74
4267 4367 4.837896 TGACGAGCAGATATTCCTACAG 57.162 45.455 0.00 0.00 0.00 2.74
4268 4368 4.207955 TGACGAGCAGATATTCCTACAGT 58.792 43.478 0.00 0.00 0.00 3.55
4269 4369 4.645136 TGACGAGCAGATATTCCTACAGTT 59.355 41.667 0.00 0.00 0.00 3.16
4270 4370 5.127194 TGACGAGCAGATATTCCTACAGTTT 59.873 40.000 0.00 0.00 0.00 2.66
4271 4371 5.352284 ACGAGCAGATATTCCTACAGTTTG 58.648 41.667 0.00 0.00 0.00 2.93
4272 4372 5.105310 ACGAGCAGATATTCCTACAGTTTGT 60.105 40.000 0.00 0.00 0.00 2.83
4273 4373 5.460419 CGAGCAGATATTCCTACAGTTTGTC 59.540 44.000 0.00 0.00 0.00 3.18
4274 4374 6.552445 AGCAGATATTCCTACAGTTTGTCT 57.448 37.500 0.00 0.00 0.00 3.41
4275 4375 7.468768 CGAGCAGATATTCCTACAGTTTGTCTA 60.469 40.741 0.00 0.00 0.00 2.59
4276 4376 7.721402 AGCAGATATTCCTACAGTTTGTCTAG 58.279 38.462 0.00 0.00 0.00 2.43
4277 4377 7.561722 AGCAGATATTCCTACAGTTTGTCTAGA 59.438 37.037 0.00 0.00 0.00 2.43
4278 4378 8.364142 GCAGATATTCCTACAGTTTGTCTAGAT 58.636 37.037 0.00 0.00 0.00 1.98
4279 4379 9.689976 CAGATATTCCTACAGTTTGTCTAGATG 57.310 37.037 0.00 0.00 0.00 2.90
4280 4380 9.427821 AGATATTCCTACAGTTTGTCTAGATGT 57.572 33.333 0.00 0.00 0.00 3.06
4284 4384 8.974060 TTCCTACAGTTTGTCTAGATGTTTTT 57.026 30.769 0.00 0.00 0.00 1.94
4308 4408 9.515226 TTTTAAGCAGATATTCCTACAGTTTGT 57.485 29.630 0.00 0.00 0.00 2.83
4309 4409 8.718102 TTAAGCAGATATTCCTACAGTTTGTC 57.282 34.615 0.00 0.00 0.00 3.18
4310 4410 6.552445 AGCAGATATTCCTACAGTTTGTCT 57.448 37.500 0.00 0.00 0.00 3.41
4311 4411 7.661536 AGCAGATATTCCTACAGTTTGTCTA 57.338 36.000 0.00 0.00 0.00 2.59
4312 4412 7.721402 AGCAGATATTCCTACAGTTTGTCTAG 58.279 38.462 0.00 0.00 0.00 2.43
4313 4413 7.561722 AGCAGATATTCCTACAGTTTGTCTAGA 59.438 37.037 0.00 0.00 0.00 2.43
4314 4414 8.364142 GCAGATATTCCTACAGTTTGTCTAGAT 58.636 37.037 0.00 0.00 0.00 1.98
4315 4415 9.689976 CAGATATTCCTACAGTTTGTCTAGATG 57.310 37.037 0.00 0.00 0.00 2.90
4316 4416 9.427821 AGATATTCCTACAGTTTGTCTAGATGT 57.572 33.333 0.00 0.00 0.00 3.06
4320 4420 8.974060 TTCCTACAGTTTGTCTAGATGTTTTT 57.026 30.769 0.00 0.00 0.00 1.94
4342 4442 7.849804 TTTTAAGGATGTCACATCTAAGCTC 57.150 36.000 17.46 0.00 0.00 4.09
4343 4443 6.798427 TTAAGGATGTCACATCTAAGCTCT 57.202 37.500 17.46 2.09 0.00 4.09
4344 4444 4.935352 AGGATGTCACATCTAAGCTCTC 57.065 45.455 17.46 0.00 0.00 3.20
4345 4445 4.285020 AGGATGTCACATCTAAGCTCTCA 58.715 43.478 17.46 0.00 0.00 3.27
4346 4446 4.099266 AGGATGTCACATCTAAGCTCTCAC 59.901 45.833 17.46 0.00 0.00 3.51
4347 4447 4.142071 GGATGTCACATCTAAGCTCTCACA 60.142 45.833 17.46 0.00 0.00 3.58
4348 4448 4.871933 TGTCACATCTAAGCTCTCACAA 57.128 40.909 0.00 0.00 0.00 3.33
4349 4449 5.213891 TGTCACATCTAAGCTCTCACAAA 57.786 39.130 0.00 0.00 0.00 2.83
4350 4450 5.798132 TGTCACATCTAAGCTCTCACAAAT 58.202 37.500 0.00 0.00 0.00 2.32
4351 4451 6.935167 TGTCACATCTAAGCTCTCACAAATA 58.065 36.000 0.00 0.00 0.00 1.40
4352 4452 7.559486 TGTCACATCTAAGCTCTCACAAATAT 58.441 34.615 0.00 0.00 0.00 1.28
4353 4453 8.695456 TGTCACATCTAAGCTCTCACAAATATA 58.305 33.333 0.00 0.00 0.00 0.86
4354 4454 9.703892 GTCACATCTAAGCTCTCACAAATATAT 57.296 33.333 0.00 0.00 0.00 0.86
4362 4462 7.375106 AGCTCTCACAAATATATAATGCAGC 57.625 36.000 0.00 0.00 0.00 5.25
4363 4463 6.938596 AGCTCTCACAAATATATAATGCAGCA 59.061 34.615 0.00 0.00 0.00 4.41
4364 4464 7.446319 AGCTCTCACAAATATATAATGCAGCAA 59.554 33.333 0.00 0.00 0.00 3.91
4365 4465 7.536622 GCTCTCACAAATATATAATGCAGCAAC 59.463 37.037 0.00 0.00 0.00 4.17
4366 4466 8.449251 TCTCACAAATATATAATGCAGCAACA 57.551 30.769 0.00 0.00 0.00 3.33
4367 4467 8.901793 TCTCACAAATATATAATGCAGCAACAA 58.098 29.630 0.00 0.00 0.00 2.83
4368 4468 9.177304 CTCACAAATATATAATGCAGCAACAAG 57.823 33.333 0.00 0.00 0.00 3.16
4369 4469 8.901793 TCACAAATATATAATGCAGCAACAAGA 58.098 29.630 0.00 0.00 0.00 3.02
4370 4470 9.518906 CACAAATATATAATGCAGCAACAAGAA 57.481 29.630 0.00 0.00 0.00 2.52
4376 4476 8.830201 ATATAATGCAGCAACAAGAAACAAAA 57.170 26.923 0.00 0.00 0.00 2.44
4377 4477 5.876612 AATGCAGCAACAAGAAACAAAAA 57.123 30.435 0.00 0.00 0.00 1.94
4401 4501 5.906772 AAAAGAACTACTCCCTCTTTCCA 57.093 39.130 0.00 0.00 38.21 3.53
4402 4502 6.455690 AAAAGAACTACTCCCTCTTTCCAT 57.544 37.500 0.00 0.00 38.21 3.41
4403 4503 5.685520 AAGAACTACTCCCTCTTTCCATC 57.314 43.478 0.00 0.00 0.00 3.51
4404 4504 4.954089 AGAACTACTCCCTCTTTCCATCT 58.046 43.478 0.00 0.00 0.00 2.90
4405 4505 6.093617 AGAACTACTCCCTCTTTCCATCTA 57.906 41.667 0.00 0.00 0.00 1.98
4406 4506 6.688554 AGAACTACTCCCTCTTTCCATCTAT 58.311 40.000 0.00 0.00 0.00 1.98
4407 4507 7.827787 AGAACTACTCCCTCTTTCCATCTATA 58.172 38.462 0.00 0.00 0.00 1.31
4408 4508 8.461033 AGAACTACTCCCTCTTTCCATCTATAT 58.539 37.037 0.00 0.00 0.00 0.86
4409 4509 9.756571 GAACTACTCCCTCTTTCCATCTATATA 57.243 37.037 0.00 0.00 0.00 0.86
4410 4510 9.762381 AACTACTCCCTCTTTCCATCTATATAG 57.238 37.037 3.10 3.10 0.00 1.31
4411 4511 8.340757 ACTACTCCCTCTTTCCATCTATATAGG 58.659 40.741 9.89 0.00 0.00 2.57
4412 4512 6.507568 ACTCCCTCTTTCCATCTATATAGGG 58.492 44.000 9.89 4.49 43.23 3.53
4413 4513 5.281314 TCCCTCTTTCCATCTATATAGGGC 58.719 45.833 9.89 0.00 41.88 5.19
4414 4514 4.410555 CCCTCTTTCCATCTATATAGGGCC 59.589 50.000 9.89 0.00 36.30 5.80
4415 4515 5.284582 CCTCTTTCCATCTATATAGGGCCT 58.715 45.833 12.58 12.58 0.00 5.19
4416 4516 6.444704 CCTCTTTCCATCTATATAGGGCCTA 58.555 44.000 17.16 17.16 0.00 3.93
4417 4517 6.903534 CCTCTTTCCATCTATATAGGGCCTAA 59.096 42.308 18.91 7.61 0.00 2.69
4418 4518 7.570607 CCTCTTTCCATCTATATAGGGCCTAAT 59.429 40.741 18.91 14.19 0.00 1.73
4419 4519 8.324191 TCTTTCCATCTATATAGGGCCTAATG 57.676 38.462 18.91 15.42 0.00 1.90
4420 4520 7.906736 TCTTTCCATCTATATAGGGCCTAATGT 59.093 37.037 18.91 9.02 0.00 2.71
4421 4521 8.463055 TTTCCATCTATATAGGGCCTAATGTT 57.537 34.615 18.91 3.18 0.00 2.71
4422 4522 8.463055 TTCCATCTATATAGGGCCTAATGTTT 57.537 34.615 18.91 2.76 0.00 2.83
4423 4523 8.463055 TCCATCTATATAGGGCCTAATGTTTT 57.537 34.615 18.91 1.94 0.00 2.43
4424 4524 8.900802 TCCATCTATATAGGGCCTAATGTTTTT 58.099 33.333 18.91 1.12 0.00 1.94
4441 4541 3.430333 TTTTTCAAGACCGCCTTTGAC 57.570 42.857 0.00 0.00 31.42 3.18
4442 4542 2.341846 TTTCAAGACCGCCTTTGACT 57.658 45.000 0.00 0.00 31.42 3.41
4443 4543 3.478857 TTTCAAGACCGCCTTTGACTA 57.521 42.857 0.00 0.00 31.42 2.59
4444 4544 3.695830 TTCAAGACCGCCTTTGACTAT 57.304 42.857 0.00 0.00 31.42 2.12
4445 4545 3.695830 TCAAGACCGCCTTTGACTATT 57.304 42.857 0.00 0.00 31.42 1.73
4446 4546 3.334691 TCAAGACCGCCTTTGACTATTG 58.665 45.455 0.00 0.00 31.42 1.90
4447 4547 3.007506 TCAAGACCGCCTTTGACTATTGA 59.992 43.478 0.00 0.00 31.42 2.57
4448 4548 3.914426 AGACCGCCTTTGACTATTGAT 57.086 42.857 0.00 0.00 0.00 2.57
4449 4549 5.105106 TCAAGACCGCCTTTGACTATTGATA 60.105 40.000 0.00 0.00 31.42 2.15
4450 4550 5.353394 AGACCGCCTTTGACTATTGATAA 57.647 39.130 0.00 0.00 0.00 1.75
4451 4551 5.360591 AGACCGCCTTTGACTATTGATAAG 58.639 41.667 0.00 0.00 0.00 1.73
4452 4552 5.128827 AGACCGCCTTTGACTATTGATAAGA 59.871 40.000 0.00 0.00 0.00 2.10
4453 4553 5.116882 ACCGCCTTTGACTATTGATAAGAC 58.883 41.667 0.00 0.00 0.00 3.01
4454 4554 5.104900 ACCGCCTTTGACTATTGATAAGACT 60.105 40.000 0.00 0.00 0.00 3.24
4455 4555 6.097839 ACCGCCTTTGACTATTGATAAGACTA 59.902 38.462 0.00 0.00 0.00 2.59
4456 4556 6.984474 CCGCCTTTGACTATTGATAAGACTAA 59.016 38.462 0.00 0.00 0.00 2.24
4457 4557 7.042658 CCGCCTTTGACTATTGATAAGACTAAC 60.043 40.741 0.00 0.00 0.00 2.34
4458 4558 7.491372 CGCCTTTGACTATTGATAAGACTAACA 59.509 37.037 0.00 0.00 0.00 2.41
4459 4559 9.162764 GCCTTTGACTATTGATAAGACTAACAA 57.837 33.333 0.00 0.00 0.00 2.83
4502 4602 7.346751 TGAAAATTATACCATTGGAAGCTCC 57.653 36.000 10.37 0.00 36.96 4.70
4503 4603 7.125391 TGAAAATTATACCATTGGAAGCTCCT 58.875 34.615 10.37 0.00 37.46 3.69
4504 4604 7.619302 TGAAAATTATACCATTGGAAGCTCCTT 59.381 33.333 10.37 0.00 37.46 3.36
4505 4605 7.978099 AAATTATACCATTGGAAGCTCCTTT 57.022 32.000 10.37 0.00 37.46 3.11
4506 4606 7.588497 AATTATACCATTGGAAGCTCCTTTC 57.412 36.000 10.37 0.00 37.46 2.62
4507 4607 2.978156 ACCATTGGAAGCTCCTTTCA 57.022 45.000 10.37 0.00 37.46 2.69
4508 4608 2.519013 ACCATTGGAAGCTCCTTTCAC 58.481 47.619 10.37 0.00 37.46 3.18
4509 4609 1.470098 CCATTGGAAGCTCCTTTCACG 59.530 52.381 0.00 0.00 37.46 4.35
4510 4610 2.154462 CATTGGAAGCTCCTTTCACGT 58.846 47.619 0.00 0.00 37.46 4.49
4511 4611 3.334691 CATTGGAAGCTCCTTTCACGTA 58.665 45.455 0.00 0.00 37.46 3.57
4512 4612 2.450609 TGGAAGCTCCTTTCACGTAC 57.549 50.000 0.00 0.00 37.46 3.67
4513 4613 1.336517 TGGAAGCTCCTTTCACGTACG 60.337 52.381 15.01 15.01 37.46 3.67
4514 4614 1.068055 GGAAGCTCCTTTCACGTACGA 60.068 52.381 24.41 0.00 32.53 3.43
4515 4615 2.608752 GGAAGCTCCTTTCACGTACGAA 60.609 50.000 24.41 3.37 32.53 3.85
4516 4616 3.251571 GAAGCTCCTTTCACGTACGAAT 58.748 45.455 24.41 0.00 0.00 3.34
4517 4617 3.314541 AGCTCCTTTCACGTACGAATT 57.685 42.857 24.41 0.00 0.00 2.17
4518 4618 3.660865 AGCTCCTTTCACGTACGAATTT 58.339 40.909 24.41 0.00 0.00 1.82
4519 4619 3.432252 AGCTCCTTTCACGTACGAATTTG 59.568 43.478 24.41 9.92 0.00 2.32
4520 4620 3.430895 GCTCCTTTCACGTACGAATTTGA 59.569 43.478 24.41 12.38 0.00 2.69
4521 4621 4.665897 GCTCCTTTCACGTACGAATTTGAC 60.666 45.833 24.41 0.00 0.00 3.18
4522 4622 3.426191 TCCTTTCACGTACGAATTTGACG 59.574 43.478 24.41 8.40 42.22 4.35
4523 4623 3.422603 CCTTTCACGTACGAATTTGACGG 60.423 47.826 24.41 13.22 40.84 4.79
4524 4624 2.420628 TCACGTACGAATTTGACGGT 57.579 45.000 24.41 0.00 40.84 4.83
4525 4625 3.550950 TCACGTACGAATTTGACGGTA 57.449 42.857 24.41 0.00 40.84 4.02
4526 4626 4.095410 TCACGTACGAATTTGACGGTAT 57.905 40.909 24.41 0.00 40.84 2.73
4527 4627 3.853103 TCACGTACGAATTTGACGGTATG 59.147 43.478 24.41 4.75 40.84 2.39
4528 4628 2.599973 ACGTACGAATTTGACGGTATGC 59.400 45.455 24.41 0.00 40.84 3.14
4529 4629 2.855963 CGTACGAATTTGACGGTATGCT 59.144 45.455 10.44 0.00 33.01 3.79
4530 4630 3.305094 CGTACGAATTTGACGGTATGCTT 59.695 43.478 10.44 0.00 33.01 3.91
4531 4631 4.201647 CGTACGAATTTGACGGTATGCTTT 60.202 41.667 10.44 0.00 33.01 3.51
4532 4632 4.078363 ACGAATTTGACGGTATGCTTTG 57.922 40.909 0.00 0.00 34.93 2.77
4533 4633 3.500680 ACGAATTTGACGGTATGCTTTGT 59.499 39.130 0.00 0.00 34.93 2.83
4534 4634 3.845775 CGAATTTGACGGTATGCTTTGTG 59.154 43.478 0.00 0.00 0.00 3.33
4535 4635 4.612712 CGAATTTGACGGTATGCTTTGTGT 60.613 41.667 0.00 0.00 0.00 3.72
4536 4636 5.390040 CGAATTTGACGGTATGCTTTGTGTA 60.390 40.000 0.00 0.00 0.00 2.90
4537 4637 5.950758 ATTTGACGGTATGCTTTGTGTAA 57.049 34.783 0.00 0.00 0.00 2.41
4538 4638 4.735662 TTGACGGTATGCTTTGTGTAAC 57.264 40.909 0.00 0.00 37.35 2.50
4539 4639 3.997762 TGACGGTATGCTTTGTGTAACT 58.002 40.909 0.00 0.00 38.04 2.24
4540 4640 4.382291 TGACGGTATGCTTTGTGTAACTT 58.618 39.130 0.00 0.00 38.04 2.66
4541 4641 4.212425 TGACGGTATGCTTTGTGTAACTTG 59.788 41.667 0.00 0.00 38.04 3.16
4542 4642 3.058501 ACGGTATGCTTTGTGTAACTTGC 60.059 43.478 0.00 0.00 38.04 4.01
4543 4643 3.058570 CGGTATGCTTTGTGTAACTTGCA 60.059 43.478 0.00 0.00 39.97 4.08
4544 4644 4.379394 CGGTATGCTTTGTGTAACTTGCAT 60.379 41.667 0.00 0.00 44.54 3.96
4545 4645 4.858692 GGTATGCTTTGTGTAACTTGCATG 59.141 41.667 8.29 0.00 43.24 4.06
4546 4646 4.589216 ATGCTTTGTGTAACTTGCATGT 57.411 36.364 0.00 0.00 42.42 3.21
4547 4647 3.963665 TGCTTTGTGTAACTTGCATGTC 58.036 40.909 5.61 0.00 38.04 3.06
4548 4648 3.379688 TGCTTTGTGTAACTTGCATGTCA 59.620 39.130 5.61 0.00 38.04 3.58
4549 4649 4.037803 TGCTTTGTGTAACTTGCATGTCAT 59.962 37.500 5.61 0.00 38.04 3.06
4550 4650 5.240403 TGCTTTGTGTAACTTGCATGTCATA 59.760 36.000 5.61 0.00 38.04 2.15
4551 4651 6.072008 TGCTTTGTGTAACTTGCATGTCATAT 60.072 34.615 5.61 0.00 38.04 1.78
4552 4652 7.120432 TGCTTTGTGTAACTTGCATGTCATATA 59.880 33.333 5.61 0.00 38.04 0.86
4553 4653 8.131100 GCTTTGTGTAACTTGCATGTCATATAT 58.869 33.333 5.61 0.00 38.04 0.86
4587 4687 3.040147 CTTGGTCAAAGTTAGCCTCGA 57.960 47.619 0.00 0.00 0.00 4.04
4588 4688 3.399330 CTTGGTCAAAGTTAGCCTCGAA 58.601 45.455 0.00 0.00 0.00 3.71
4589 4689 3.478857 TGGTCAAAGTTAGCCTCGAAA 57.521 42.857 0.00 0.00 0.00 3.46
4590 4690 3.811083 TGGTCAAAGTTAGCCTCGAAAA 58.189 40.909 0.00 0.00 0.00 2.29
4591 4691 4.200874 TGGTCAAAGTTAGCCTCGAAAAA 58.799 39.130 0.00 0.00 0.00 1.94
4592 4692 4.035909 TGGTCAAAGTTAGCCTCGAAAAAC 59.964 41.667 0.00 0.00 0.00 2.43
4593 4693 4.209112 GTCAAAGTTAGCCTCGAAAAACG 58.791 43.478 0.00 0.00 44.09 3.60
4603 4703 2.773993 TCGAAAAACGATTAGGCCCT 57.226 45.000 0.00 0.00 46.45 5.19
4604 4704 3.891422 TCGAAAAACGATTAGGCCCTA 57.109 42.857 0.00 0.00 46.45 3.53
4605 4705 4.411256 TCGAAAAACGATTAGGCCCTAT 57.589 40.909 0.00 0.00 46.45 2.57
4606 4706 5.534207 TCGAAAAACGATTAGGCCCTATA 57.466 39.130 0.00 0.00 46.45 1.31
4607 4707 6.105397 TCGAAAAACGATTAGGCCCTATAT 57.895 37.500 0.00 0.00 46.45 0.86
4608 4708 7.230849 TCGAAAAACGATTAGGCCCTATATA 57.769 36.000 0.00 0.00 46.45 0.86
4609 4709 7.318141 TCGAAAAACGATTAGGCCCTATATAG 58.682 38.462 0.00 2.46 46.45 1.31
4610 4710 7.177216 TCGAAAAACGATTAGGCCCTATATAGA 59.823 37.037 11.53 0.00 46.45 1.98
4611 4711 7.980099 CGAAAAACGATTAGGCCCTATATAGAT 59.020 37.037 11.53 0.00 45.77 1.98
4612 4712 9.099454 GAAAAACGATTAGGCCCTATATAGATG 57.901 37.037 11.53 3.39 0.00 2.90
4613 4713 6.732896 AACGATTAGGCCCTATATAGATGG 57.267 41.667 11.53 6.04 0.00 3.51
4614 4714 6.027025 ACGATTAGGCCCTATATAGATGGA 57.973 41.667 11.53 0.00 0.00 3.41
4615 4715 6.441222 ACGATTAGGCCCTATATAGATGGAA 58.559 40.000 11.53 0.00 0.00 3.53
4616 4716 6.551601 ACGATTAGGCCCTATATAGATGGAAG 59.448 42.308 11.53 0.00 0.00 3.46
4617 4717 6.015010 CGATTAGGCCCTATATAGATGGAAGG 60.015 46.154 11.53 3.94 0.00 3.46
4618 4718 4.994411 AGGCCCTATATAGATGGAAGGA 57.006 45.455 11.53 0.00 0.00 3.36
4619 4719 4.889780 AGGCCCTATATAGATGGAAGGAG 58.110 47.826 11.53 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.520260 GGGTGGGCAGCATGATCC 60.520 66.667 0.00 0.00 39.69 3.36
80 81 7.544566 TCGTCTCATGTCTTCTTTTATACCAAC 59.455 37.037 0.00 0.00 0.00 3.77
167 168 3.458189 ACTTTGATTTCTCGATAGCGGG 58.542 45.455 0.00 0.00 40.06 6.13
169 170 6.201044 ACCATAACTTTGATTTCTCGATAGCG 59.799 38.462 0.00 0.00 39.35 4.26
245 246 1.526887 CCAAGTTGGCGTATCATAGCG 59.473 52.381 9.46 0.00 0.00 4.26
252 253 3.443681 CCATTTCTTCCAAGTTGGCGTAT 59.556 43.478 17.68 3.39 37.47 3.06
323 324 9.988350 GACGTGTCATAAAATGAATGAATAGTT 57.012 29.630 0.00 0.00 41.69 2.24
324 325 9.161629 TGACGTGTCATAAAATGAATGAATAGT 57.838 29.630 0.00 0.00 41.69 2.12
325 326 9.986833 TTGACGTGTCATAAAATGAATGAATAG 57.013 29.630 3.14 0.00 41.69 1.73
336 337 8.864069 ACATCAAATTTTGACGTGTCATAAAA 57.136 26.923 13.80 6.23 43.48 1.52
345 346 9.859427 AATTCATATGACATCAAATTTTGACGT 57.141 25.926 13.80 12.06 43.48 4.34
390 391 5.847670 GCTCTACGCTTATATTTGAAGGG 57.152 43.478 0.00 0.00 41.35 3.95
615 617 0.181114 TTCCTCTTCATCCGCCATGG 59.819 55.000 7.63 7.63 40.09 3.66
621 623 2.680312 TGCTTCTTCCTCTTCATCCG 57.320 50.000 0.00 0.00 0.00 4.18
742 745 8.625786 TCTCAATGATTGTCAGATCTCAAAAA 57.374 30.769 4.93 0.00 0.00 1.94
743 746 8.803397 ATCTCAATGATTGTCAGATCTCAAAA 57.197 30.769 4.93 0.00 29.59 2.44
744 747 8.803397 AATCTCAATGATTGTCAGATCTCAAA 57.197 30.769 9.08 0.00 43.20 2.69
745 748 8.674607 CAAATCTCAATGATTGTCAGATCTCAA 58.325 33.333 9.08 0.00 43.99 3.02
746 749 7.201705 GCAAATCTCAATGATTGTCAGATCTCA 60.202 37.037 9.08 0.00 43.99 3.27
747 750 7.133513 GCAAATCTCAATGATTGTCAGATCTC 58.866 38.462 9.08 1.03 43.99 2.75
748 751 6.238402 CGCAAATCTCAATGATTGTCAGATCT 60.238 38.462 9.08 0.00 43.99 2.75
749 752 5.907945 CGCAAATCTCAATGATTGTCAGATC 59.092 40.000 9.08 0.00 43.99 2.75
750 753 5.356190 ACGCAAATCTCAATGATTGTCAGAT 59.644 36.000 4.93 4.48 43.99 2.90
751 754 4.696877 ACGCAAATCTCAATGATTGTCAGA 59.303 37.500 4.93 2.16 43.99 3.27
752 755 4.791676 CACGCAAATCTCAATGATTGTCAG 59.208 41.667 4.93 0.00 43.99 3.51
753 756 4.455190 TCACGCAAATCTCAATGATTGTCA 59.545 37.500 4.93 0.00 43.99 3.58
786 789 7.806014 GGTAATTGCGTACATATATTTTGGTGG 59.194 37.037 0.00 0.00 0.00 4.61
957 961 1.120530 GACAGGTACGGGATGGATGT 58.879 55.000 0.00 0.00 0.00 3.06
1400 1406 2.147387 AAAGGCCCCTCTCACACGT 61.147 57.895 0.00 0.00 0.00 4.49
1477 1484 2.170607 AGACCATACAAGGGACATTCGG 59.829 50.000 0.00 0.00 0.00 4.30
1485 1492 3.282021 CCATGACAAGACCATACAAGGG 58.718 50.000 0.00 0.00 0.00 3.95
1566 1573 1.548081 CACCCATGCACAGGATCAAA 58.452 50.000 10.76 0.00 0.00 2.69
1637 1644 1.834263 AGGCTTACCCACAGAGACATC 59.166 52.381 0.00 0.00 36.11 3.06
1657 1664 4.387026 AAGGTGAGGTTTGGAATGATCA 57.613 40.909 0.00 0.00 0.00 2.92
1771 1778 1.402787 CCCCAAGTGAAAACTGCAGT 58.597 50.000 15.25 15.25 0.00 4.40
1844 1851 6.885922 ACTAGGACGCCACTAAGAATTTAAT 58.114 36.000 0.00 0.00 0.00 1.40
1846 1853 5.927281 ACTAGGACGCCACTAAGAATTTA 57.073 39.130 0.00 0.00 0.00 1.40
1912 1919 1.379916 CCCACAAGGAGGCATGTCA 59.620 57.895 0.00 0.00 38.24 3.58
1965 1972 4.625607 ATACTTAATCTAGGCACTGGGC 57.374 45.455 0.00 0.00 41.52 5.36
2019 2026 1.277842 TCGGAACAGCCTCTAAATGCA 59.722 47.619 0.00 0.00 0.00 3.96
2202 2290 1.655484 GCATGGGCAAGCCAAAATAC 58.345 50.000 13.87 0.00 40.72 1.89
2240 2328 0.752658 GGGGCTGTTTGGATATTGCC 59.247 55.000 0.00 0.00 39.61 4.52
2249 2337 1.168714 GAGCACTAAGGGGCTGTTTG 58.831 55.000 0.00 0.00 41.22 2.93
2335 2423 2.403252 AATCCACTAACAAGGCTCCG 57.597 50.000 0.00 0.00 0.00 4.63
2376 2464 7.389232 TGTGATCAGAAGTTCACAACTCATAT 58.611 34.615 5.50 0.00 46.18 1.78
2377 2465 6.758254 TGTGATCAGAAGTTCACAACTCATA 58.242 36.000 5.50 0.00 46.18 2.15
2667 2755 6.974932 ACTCATGACATGTCTTTGATACAC 57.025 37.500 25.55 0.00 0.00 2.90
2708 2796 6.017934 CCCACAACATTTATACAAGATCGGAG 60.018 42.308 0.00 0.00 0.00 4.63
2771 2859 2.684881 CCTCTGATCCCAAAACATTCGG 59.315 50.000 0.00 0.00 0.00 4.30
2773 2861 3.950395 CTCCCTCTGATCCCAAAACATTC 59.050 47.826 0.00 0.00 0.00 2.67
2775 2863 2.922283 ACTCCCTCTGATCCCAAAACAT 59.078 45.455 0.00 0.00 0.00 2.71
2888 2978 1.568504 ATTCACCTTCTGGCCGTCTA 58.431 50.000 0.00 0.00 36.63 2.59
2896 2986 4.582869 TCAGACCATCAATTCACCTTCTG 58.417 43.478 0.00 0.00 0.00 3.02
2909 2999 0.737219 GCTTGGCACATCAGACCATC 59.263 55.000 0.00 0.00 39.30 3.51
2922 3012 6.379386 AGATTAAGTTTAAGAAACGCTTGGC 58.621 36.000 0.00 0.00 45.88 4.52
3109 3199 7.171167 CACCAAAAATACAGCATCACAAAATGA 59.829 33.333 0.00 0.00 43.13 2.57
3110 3200 7.292292 CACCAAAAATACAGCATCACAAAATG 58.708 34.615 0.00 0.00 0.00 2.32
3125 3215 3.560453 CCGACCTTCTCCCACCAAAAATA 60.560 47.826 0.00 0.00 0.00 1.40
3182 3273 4.731773 GCACTTTAAGCGAGCATAAGCATT 60.732 41.667 0.00 0.00 45.49 3.56
3196 3287 8.725148 ACAAATGATCAAGAGTAGCACTTTAAG 58.275 33.333 0.00 0.00 0.00 1.85
3197 3288 8.621532 ACAAATGATCAAGAGTAGCACTTTAA 57.378 30.769 0.00 0.00 0.00 1.52
3220 3311 8.995220 GTAGTGACAAAAACATAAGACCATACA 58.005 33.333 0.00 0.00 0.00 2.29
3231 3322 9.896645 ATATGAGATGAGTAGTGACAAAAACAT 57.103 29.630 0.00 0.00 0.00 2.71
3376 3467 5.880054 ACTTTGTAACATCATTTCCCTCG 57.120 39.130 0.00 0.00 0.00 4.63
3806 3898 1.981256 TGAAAACTGAAGGGAGCACC 58.019 50.000 0.00 0.00 40.67 5.01
3812 3904 6.183360 ACAACTGAGAAATGAAAACTGAAGGG 60.183 38.462 0.00 0.00 0.00 3.95
3831 3923 6.075762 TCCATTTGATTCAAGTCACAACTG 57.924 37.500 0.00 0.00 35.36 3.16
3832 3924 6.713762 TTCCATTTGATTCAAGTCACAACT 57.286 33.333 0.00 0.00 37.32 3.16
3833 3925 7.652909 TCAATTCCATTTGATTCAAGTCACAAC 59.347 33.333 0.00 0.00 30.82 3.32
3915 4007 5.811613 ACCACAACATCACAAACATGAAAAG 59.188 36.000 0.00 0.00 30.82 2.27
3972 4064 3.495753 GTCGTCGTGGGTTGATAAAAACT 59.504 43.478 0.00 0.00 0.00 2.66
4023 4117 7.431249 TCATACGTTTTAGCGAGGAAATAGAT 58.569 34.615 0.00 0.00 35.59 1.98
4101 4199 8.455682 ACGTAACAGATTCAAGTTTGAGAAAAA 58.544 29.630 0.00 0.00 38.61 1.94
4161 4260 3.713902 CCCAGCGGCTCAAATATCT 57.286 52.632 0.00 0.00 0.00 1.98
4180 4279 4.331992 CCAACTGCATGAATCTCAGTACAG 59.668 45.833 0.00 0.00 39.86 2.74
4202 4301 4.165779 CGCATACCAATGAGAAAACAACC 58.834 43.478 0.00 0.00 35.11 3.77
4208 4307 3.342377 TGTCCGCATACCAATGAGAAA 57.658 42.857 0.00 0.00 35.11 2.52
4222 4321 4.211502 GCAATGGCCCATGTCCGC 62.212 66.667 0.00 0.00 0.00 5.54
4282 4382 9.515226 ACAAACTGTAGGAATATCTGCTTAAAA 57.485 29.630 0.00 0.00 0.00 1.52
4283 4383 9.162764 GACAAACTGTAGGAATATCTGCTTAAA 57.837 33.333 0.00 0.00 0.00 1.52
4284 4384 8.540388 AGACAAACTGTAGGAATATCTGCTTAA 58.460 33.333 0.00 0.00 0.00 1.85
4285 4385 8.079211 AGACAAACTGTAGGAATATCTGCTTA 57.921 34.615 0.00 0.00 0.00 3.09
4286 4386 6.951971 AGACAAACTGTAGGAATATCTGCTT 58.048 36.000 0.00 0.00 0.00 3.91
4287 4387 6.552445 AGACAAACTGTAGGAATATCTGCT 57.448 37.500 0.00 0.00 0.00 4.24
4288 4388 7.717568 TCTAGACAAACTGTAGGAATATCTGC 58.282 38.462 0.00 0.00 0.00 4.26
4289 4389 9.689976 CATCTAGACAAACTGTAGGAATATCTG 57.310 37.037 0.00 0.00 0.00 2.90
4290 4390 9.427821 ACATCTAGACAAACTGTAGGAATATCT 57.572 33.333 0.00 0.00 0.00 1.98
4294 4394 9.574516 AAAAACATCTAGACAAACTGTAGGAAT 57.425 29.630 0.00 0.00 0.00 3.01
4295 4395 8.974060 AAAAACATCTAGACAAACTGTAGGAA 57.026 30.769 0.00 0.00 0.00 3.36
4317 4417 8.103305 AGAGCTTAGATGTGACATCCTTAAAAA 58.897 33.333 21.05 6.46 0.00 1.94
4318 4418 7.624549 AGAGCTTAGATGTGACATCCTTAAAA 58.375 34.615 21.05 8.00 0.00 1.52
4319 4419 7.093333 TGAGAGCTTAGATGTGACATCCTTAAA 60.093 37.037 21.05 10.18 0.00 1.52
4320 4420 6.381133 TGAGAGCTTAGATGTGACATCCTTAA 59.619 38.462 21.05 13.11 0.00 1.85
4321 4421 5.893824 TGAGAGCTTAGATGTGACATCCTTA 59.106 40.000 21.05 6.22 0.00 2.69
4322 4422 4.713814 TGAGAGCTTAGATGTGACATCCTT 59.286 41.667 21.05 7.22 0.00 3.36
4323 4423 4.099266 GTGAGAGCTTAGATGTGACATCCT 59.901 45.833 21.05 11.37 0.00 3.24
4324 4424 4.142071 TGTGAGAGCTTAGATGTGACATCC 60.142 45.833 21.05 6.69 0.00 3.51
4325 4425 5.003692 TGTGAGAGCTTAGATGTGACATC 57.996 43.478 17.46 17.46 0.00 3.06
4326 4426 5.411831 TTGTGAGAGCTTAGATGTGACAT 57.588 39.130 0.00 0.00 0.00 3.06
4327 4427 4.871933 TTGTGAGAGCTTAGATGTGACA 57.128 40.909 0.00 0.00 0.00 3.58
4328 4428 9.703892 ATATATTTGTGAGAGCTTAGATGTGAC 57.296 33.333 0.00 0.00 0.00 3.67
4336 4436 8.939929 GCTGCATTATATATTTGTGAGAGCTTA 58.060 33.333 0.00 0.00 0.00 3.09
4337 4437 7.446319 TGCTGCATTATATATTTGTGAGAGCTT 59.554 33.333 0.00 0.00 0.00 3.74
4338 4438 6.938596 TGCTGCATTATATATTTGTGAGAGCT 59.061 34.615 0.00 0.00 0.00 4.09
4339 4439 7.137490 TGCTGCATTATATATTTGTGAGAGC 57.863 36.000 0.00 0.00 0.00 4.09
4340 4440 8.562052 TGTTGCTGCATTATATATTTGTGAGAG 58.438 33.333 1.84 0.00 0.00 3.20
4341 4441 8.449251 TGTTGCTGCATTATATATTTGTGAGA 57.551 30.769 1.84 0.00 0.00 3.27
4342 4442 9.177304 CTTGTTGCTGCATTATATATTTGTGAG 57.823 33.333 1.84 0.00 0.00 3.51
4343 4443 8.901793 TCTTGTTGCTGCATTATATATTTGTGA 58.098 29.630 1.84 0.00 0.00 3.58
4344 4444 9.518906 TTCTTGTTGCTGCATTATATATTTGTG 57.481 29.630 1.84 0.00 0.00 3.33
4350 4450 9.920133 TTTTGTTTCTTGTTGCTGCATTATATA 57.080 25.926 1.84 0.00 0.00 0.86
4351 4451 8.830201 TTTTGTTTCTTGTTGCTGCATTATAT 57.170 26.923 1.84 0.00 0.00 0.86
4352 4452 8.654230 TTTTTGTTTCTTGTTGCTGCATTATA 57.346 26.923 1.84 0.00 0.00 0.98
4353 4453 7.551035 TTTTTGTTTCTTGTTGCTGCATTAT 57.449 28.000 1.84 0.00 0.00 1.28
4354 4454 6.974932 TTTTTGTTTCTTGTTGCTGCATTA 57.025 29.167 1.84 0.00 0.00 1.90
4355 4455 5.876612 TTTTTGTTTCTTGTTGCTGCATT 57.123 30.435 1.84 0.00 0.00 3.56
4378 4478 6.262056 TGGAAAGAGGGAGTAGTTCTTTTT 57.738 37.500 0.86 0.00 40.27 1.94
4379 4479 5.906772 TGGAAAGAGGGAGTAGTTCTTTT 57.093 39.130 0.86 0.00 40.27 2.27
4380 4480 5.788014 AGATGGAAAGAGGGAGTAGTTCTTT 59.212 40.000 0.00 0.00 42.21 2.52
4381 4481 5.346270 AGATGGAAAGAGGGAGTAGTTCTT 58.654 41.667 0.00 0.00 32.80 2.52
4382 4482 4.954089 AGATGGAAAGAGGGAGTAGTTCT 58.046 43.478 0.00 0.00 0.00 3.01
4383 4483 6.987403 ATAGATGGAAAGAGGGAGTAGTTC 57.013 41.667 0.00 0.00 0.00 3.01
4384 4484 9.762381 CTATATAGATGGAAAGAGGGAGTAGTT 57.238 37.037 3.44 0.00 0.00 2.24
4385 4485 8.340757 CCTATATAGATGGAAAGAGGGAGTAGT 58.659 40.741 11.53 0.00 0.00 2.73
4386 4486 7.782644 CCCTATATAGATGGAAAGAGGGAGTAG 59.217 44.444 11.53 0.00 44.48 2.57
4387 4487 7.653503 CCCTATATAGATGGAAAGAGGGAGTA 58.346 42.308 11.53 0.00 44.48 2.59
4388 4488 6.507568 CCCTATATAGATGGAAAGAGGGAGT 58.492 44.000 11.53 0.00 44.48 3.85
4389 4489 5.365314 GCCCTATATAGATGGAAAGAGGGAG 59.635 48.000 11.53 0.00 44.48 4.30
4390 4490 5.281314 GCCCTATATAGATGGAAAGAGGGA 58.719 45.833 11.53 0.00 44.48 4.20
4391 4491 4.410555 GGCCCTATATAGATGGAAAGAGGG 59.589 50.000 11.53 3.52 44.52 4.30
4392 4492 5.284582 AGGCCCTATATAGATGGAAAGAGG 58.715 45.833 11.53 1.87 0.00 3.69
4393 4493 7.979786 TTAGGCCCTATATAGATGGAAAGAG 57.020 40.000 11.53 0.00 0.00 2.85
4394 4494 7.906736 ACATTAGGCCCTATATAGATGGAAAGA 59.093 37.037 11.53 0.00 0.00 2.52
4395 4495 8.095452 ACATTAGGCCCTATATAGATGGAAAG 57.905 38.462 11.53 0.00 0.00 2.62
4396 4496 8.463055 AACATTAGGCCCTATATAGATGGAAA 57.537 34.615 11.53 1.08 0.00 3.13
4397 4497 8.463055 AAACATTAGGCCCTATATAGATGGAA 57.537 34.615 11.53 0.00 0.00 3.53
4398 4498 8.463055 AAAACATTAGGCCCTATATAGATGGA 57.537 34.615 11.53 0.00 0.00 3.41
4421 4521 3.020984 AGTCAAAGGCGGTCTTGAAAAA 58.979 40.909 0.00 0.00 35.55 1.94
4422 4522 2.650322 AGTCAAAGGCGGTCTTGAAAA 58.350 42.857 0.00 0.00 35.55 2.29
4423 4523 2.341846 AGTCAAAGGCGGTCTTGAAA 57.658 45.000 0.00 0.00 35.55 2.69
4424 4524 3.695830 ATAGTCAAAGGCGGTCTTGAA 57.304 42.857 0.00 0.00 35.55 2.69
4425 4525 3.007506 TCAATAGTCAAAGGCGGTCTTGA 59.992 43.478 0.00 0.00 35.55 3.02
4426 4526 3.334691 TCAATAGTCAAAGGCGGTCTTG 58.665 45.455 0.00 0.00 35.55 3.02
4427 4527 3.695830 TCAATAGTCAAAGGCGGTCTT 57.304 42.857 0.00 0.00 37.28 3.01
4428 4528 3.914426 ATCAATAGTCAAAGGCGGTCT 57.086 42.857 0.00 0.00 0.00 3.85
4429 4529 5.234543 GTCTTATCAATAGTCAAAGGCGGTC 59.765 44.000 0.00 0.00 0.00 4.79
4430 4530 5.104900 AGTCTTATCAATAGTCAAAGGCGGT 60.105 40.000 0.00 0.00 0.00 5.68
4431 4531 5.360591 AGTCTTATCAATAGTCAAAGGCGG 58.639 41.667 0.00 0.00 0.00 6.13
4432 4532 7.491372 TGTTAGTCTTATCAATAGTCAAAGGCG 59.509 37.037 0.00 0.00 0.00 5.52
4433 4533 8.718102 TGTTAGTCTTATCAATAGTCAAAGGC 57.282 34.615 0.00 0.00 0.00 4.35
4476 4576 9.077885 GGAGCTTCCAATGGTATAATTTTCATA 57.922 33.333 0.00 0.00 36.28 2.15
4477 4577 7.786464 AGGAGCTTCCAATGGTATAATTTTCAT 59.214 33.333 0.00 0.00 39.61 2.57
4478 4578 7.125391 AGGAGCTTCCAATGGTATAATTTTCA 58.875 34.615 0.00 0.00 39.61 2.69
4479 4579 7.588497 AGGAGCTTCCAATGGTATAATTTTC 57.412 36.000 0.00 0.00 39.61 2.29
4480 4580 7.978099 AAGGAGCTTCCAATGGTATAATTTT 57.022 32.000 0.00 0.00 39.61 1.82
4481 4581 7.619302 TGAAAGGAGCTTCCAATGGTATAATTT 59.381 33.333 0.00 0.00 39.61 1.82
4482 4582 7.068716 GTGAAAGGAGCTTCCAATGGTATAATT 59.931 37.037 0.00 0.00 39.61 1.40
4483 4583 6.547510 GTGAAAGGAGCTTCCAATGGTATAAT 59.452 38.462 0.00 0.00 39.61 1.28
4484 4584 5.885912 GTGAAAGGAGCTTCCAATGGTATAA 59.114 40.000 0.00 0.00 39.61 0.98
4485 4585 5.437060 GTGAAAGGAGCTTCCAATGGTATA 58.563 41.667 0.00 0.00 39.61 1.47
4486 4586 4.273318 GTGAAAGGAGCTTCCAATGGTAT 58.727 43.478 0.00 0.00 39.61 2.73
4487 4587 3.686016 GTGAAAGGAGCTTCCAATGGTA 58.314 45.455 0.00 0.00 39.61 3.25
4488 4588 2.519013 GTGAAAGGAGCTTCCAATGGT 58.481 47.619 0.00 0.00 39.61 3.55
4489 4589 1.470098 CGTGAAAGGAGCTTCCAATGG 59.530 52.381 0.00 0.00 39.61 3.16
4490 4590 2.154462 ACGTGAAAGGAGCTTCCAATG 58.846 47.619 0.00 0.00 39.61 2.82
4491 4591 2.568623 ACGTGAAAGGAGCTTCCAAT 57.431 45.000 0.00 0.00 39.61 3.16
4492 4592 2.762745 GTACGTGAAAGGAGCTTCCAA 58.237 47.619 0.00 0.00 39.61 3.53
4493 4593 1.336517 CGTACGTGAAAGGAGCTTCCA 60.337 52.381 7.22 0.00 39.61 3.53
4494 4594 1.068055 TCGTACGTGAAAGGAGCTTCC 60.068 52.381 16.05 0.00 36.58 3.46
4495 4595 2.342910 TCGTACGTGAAAGGAGCTTC 57.657 50.000 16.05 0.00 0.00 3.86
4496 4596 2.806608 TTCGTACGTGAAAGGAGCTT 57.193 45.000 16.05 0.00 0.00 3.74
4497 4597 3.314541 AATTCGTACGTGAAAGGAGCT 57.685 42.857 16.05 0.00 0.00 4.09
4498 4598 3.430895 TCAAATTCGTACGTGAAAGGAGC 59.569 43.478 16.05 0.00 0.00 4.70
4499 4599 4.432503 CGTCAAATTCGTACGTGAAAGGAG 60.433 45.833 16.05 0.00 32.16 3.69
4500 4600 3.426191 CGTCAAATTCGTACGTGAAAGGA 59.574 43.478 16.05 4.81 32.16 3.36
4501 4601 3.422603 CCGTCAAATTCGTACGTGAAAGG 60.423 47.826 16.05 13.44 34.90 3.11
4502 4602 3.182972 ACCGTCAAATTCGTACGTGAAAG 59.817 43.478 16.05 8.52 34.90 2.62
4503 4603 3.122297 ACCGTCAAATTCGTACGTGAAA 58.878 40.909 16.05 2.41 34.90 2.69
4504 4604 2.741612 ACCGTCAAATTCGTACGTGAA 58.258 42.857 16.05 3.23 34.90 3.18
4505 4605 2.420628 ACCGTCAAATTCGTACGTGA 57.579 45.000 16.05 8.71 34.90 4.35
4506 4606 3.540744 GCATACCGTCAAATTCGTACGTG 60.541 47.826 16.05 6.20 34.90 4.49
4507 4607 2.599973 GCATACCGTCAAATTCGTACGT 59.400 45.455 16.05 0.00 34.90 3.57
4508 4608 2.855963 AGCATACCGTCAAATTCGTACG 59.144 45.455 9.53 9.53 36.42 3.67
4509 4609 4.852609 AAGCATACCGTCAAATTCGTAC 57.147 40.909 0.00 0.00 0.00 3.67
4510 4610 4.691685 ACAAAGCATACCGTCAAATTCGTA 59.308 37.500 0.00 0.00 0.00 3.43
4511 4611 3.500680 ACAAAGCATACCGTCAAATTCGT 59.499 39.130 0.00 0.00 0.00 3.85
4512 4612 3.845775 CACAAAGCATACCGTCAAATTCG 59.154 43.478 0.00 0.00 0.00 3.34
4513 4613 4.794169 ACACAAAGCATACCGTCAAATTC 58.206 39.130 0.00 0.00 0.00 2.17
4514 4614 4.846779 ACACAAAGCATACCGTCAAATT 57.153 36.364 0.00 0.00 0.00 1.82
4515 4615 5.472137 AGTTACACAAAGCATACCGTCAAAT 59.528 36.000 0.00 0.00 0.00 2.32
4516 4616 4.817464 AGTTACACAAAGCATACCGTCAAA 59.183 37.500 0.00 0.00 0.00 2.69
4517 4617 4.382291 AGTTACACAAAGCATACCGTCAA 58.618 39.130 0.00 0.00 0.00 3.18
4518 4618 3.997762 AGTTACACAAAGCATACCGTCA 58.002 40.909 0.00 0.00 0.00 4.35
4519 4619 4.708601 CAAGTTACACAAAGCATACCGTC 58.291 43.478 0.00 0.00 0.00 4.79
4520 4620 3.058501 GCAAGTTACACAAAGCATACCGT 60.059 43.478 0.00 0.00 0.00 4.83
4521 4621 3.058570 TGCAAGTTACACAAAGCATACCG 60.059 43.478 0.00 0.00 0.00 4.02
4522 4622 4.497473 TGCAAGTTACACAAAGCATACC 57.503 40.909 0.00 0.00 0.00 2.73
4523 4623 5.460646 ACATGCAAGTTACACAAAGCATAC 58.539 37.500 0.00 0.00 40.38 2.39
4524 4624 5.240403 TGACATGCAAGTTACACAAAGCATA 59.760 36.000 0.00 0.00 40.38 3.14
4525 4625 4.037803 TGACATGCAAGTTACACAAAGCAT 59.962 37.500 0.00 0.00 42.82 3.79
4526 4626 3.379688 TGACATGCAAGTTACACAAAGCA 59.620 39.130 0.00 0.00 36.34 3.91
4527 4627 3.963665 TGACATGCAAGTTACACAAAGC 58.036 40.909 0.00 0.00 0.00 3.51
4556 4656 9.216117 GCTAACTTTGACCAAGTATTAGAGAAA 57.784 33.333 10.96 0.00 45.77 2.52
4557 4657 7.822822 GGCTAACTTTGACCAAGTATTAGAGAA 59.177 37.037 10.96 0.00 45.77 2.87
4558 4658 7.180408 AGGCTAACTTTGACCAAGTATTAGAGA 59.820 37.037 0.00 0.00 45.77 3.10
4559 4659 7.331791 AGGCTAACTTTGACCAAGTATTAGAG 58.668 38.462 0.00 0.00 45.77 2.43
4560 4660 7.253905 AGGCTAACTTTGACCAAGTATTAGA 57.746 36.000 0.00 0.00 45.77 2.10
4561 4661 6.255887 CGAGGCTAACTTTGACCAAGTATTAG 59.744 42.308 0.00 0.00 45.77 1.73
4562 4662 6.071221 TCGAGGCTAACTTTGACCAAGTATTA 60.071 38.462 0.00 0.00 45.77 0.98
4563 4663 4.935808 CGAGGCTAACTTTGACCAAGTATT 59.064 41.667 0.00 0.00 45.77 1.89
4564 4664 4.222145 TCGAGGCTAACTTTGACCAAGTAT 59.778 41.667 0.00 0.00 45.77 2.12
4565 4665 3.575256 TCGAGGCTAACTTTGACCAAGTA 59.425 43.478 0.00 0.00 45.77 2.24
4567 4667 3.040147 TCGAGGCTAACTTTGACCAAG 57.960 47.619 0.00 0.00 38.64 3.61
4568 4668 3.478857 TTCGAGGCTAACTTTGACCAA 57.521 42.857 0.00 0.00 0.00 3.67
4569 4669 3.478857 TTTCGAGGCTAACTTTGACCA 57.521 42.857 0.00 0.00 0.00 4.02
4570 4670 4.534168 GTTTTTCGAGGCTAACTTTGACC 58.466 43.478 0.00 0.00 0.00 4.02
4571 4671 4.025480 TCGTTTTTCGAGGCTAACTTTGAC 60.025 41.667 0.00 0.00 44.01 3.18
4572 4672 4.121317 TCGTTTTTCGAGGCTAACTTTGA 58.879 39.130 0.00 0.00 44.01 2.69
4573 4673 4.461992 TCGTTTTTCGAGGCTAACTTTG 57.538 40.909 0.00 0.00 44.01 2.77
4585 4685 7.318141 TCTATATAGGGCCTAATCGTTTTTCG 58.682 38.462 18.91 0.00 41.41 3.46
4586 4686 9.099454 CATCTATATAGGGCCTAATCGTTTTTC 57.901 37.037 18.91 0.00 0.00 2.29
4587 4687 8.047310 CCATCTATATAGGGCCTAATCGTTTTT 58.953 37.037 18.91 0.30 0.00 1.94
4588 4688 7.402071 TCCATCTATATAGGGCCTAATCGTTTT 59.598 37.037 18.91 1.12 0.00 2.43
4589 4689 6.901300 TCCATCTATATAGGGCCTAATCGTTT 59.099 38.462 18.91 1.94 0.00 3.60
4590 4690 6.441222 TCCATCTATATAGGGCCTAATCGTT 58.559 40.000 18.91 2.76 0.00 3.85
4591 4691 6.027025 TCCATCTATATAGGGCCTAATCGT 57.973 41.667 18.91 3.18 0.00 3.73
4592 4692 6.015010 CCTTCCATCTATATAGGGCCTAATCG 60.015 46.154 18.91 8.75 0.00 3.34
4593 4693 7.076446 TCCTTCCATCTATATAGGGCCTAATC 58.924 42.308 18.91 0.00 0.00 1.75
4594 4694 7.009960 TCCTTCCATCTATATAGGGCCTAAT 57.990 40.000 18.91 14.19 0.00 1.73
4595 4695 6.432190 TCCTTCCATCTATATAGGGCCTAA 57.568 41.667 18.91 7.61 0.00 2.69
4596 4696 6.031964 CTCCTTCCATCTATATAGGGCCTA 57.968 45.833 17.16 17.16 0.00 3.93
4597 4697 4.889780 CTCCTTCCATCTATATAGGGCCT 58.110 47.826 12.58 12.58 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.