Multiple sequence alignment - TraesCS2B01G250600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G250600 chr2B 100.000 1968 0 0 667 2634 260638466 260640433 0.000000e+00 3635
1 TraesCS2B01G250600 chr2B 91.815 281 22 1 667 947 675957768 675957489 8.840000e-105 390
2 TraesCS2B01G250600 chr2B 100.000 209 0 0 1 209 260637800 260638008 1.140000e-103 387
3 TraesCS2B01G250600 chr2B 91.753 97 6 2 2340 2436 238073287 238073193 1.640000e-27 134
4 TraesCS2B01G250600 chr2D 91.573 1424 39 25 977 2336 207251776 207250370 0.000000e+00 1890
5 TraesCS2B01G250600 chr2D 99.535 215 1 0 2420 2634 207250384 207250170 2.460000e-105 392
6 TraesCS2B01G250600 chr2A 91.648 1353 76 23 998 2336 257853859 257855188 0.000000e+00 1838
7 TraesCS2B01G250600 chr2A 91.459 281 23 1 667 947 515486045 515485766 4.110000e-103 385
8 TraesCS2B01G250600 chr2A 98.140 215 4 0 2420 2634 257855174 257855388 2.480000e-100 375
9 TraesCS2B01G250600 chr6B 81.506 611 93 10 1187 1788 703147084 703147683 3.940000e-133 484
10 TraesCS2B01G250600 chr6B 91.103 281 24 1 667 947 669054749 669054470 1.910000e-101 379
11 TraesCS2B01G250600 chr6B 90.391 281 26 1 667 947 388457373 388457652 4.140000e-98 368
12 TraesCS2B01G250600 chr6B 96.190 210 7 1 1 209 169055493 169055702 2.510000e-90 342
13 TraesCS2B01G250600 chr6B 92.361 144 8 3 978 1121 703146339 703146479 4.450000e-48 202
14 TraesCS2B01G250600 chr6D 82.033 551 57 13 1179 1704 461387683 461388216 5.210000e-117 431
15 TraesCS2B01G250600 chr6D 93.893 131 7 1 989 1119 461387191 461387320 2.070000e-46 196
16 TraesCS2B01G250600 chr6A 81.851 551 64 12 1179 1704 608073815 608074354 5.210000e-117 431
17 TraesCS2B01G250600 chr6A 94.488 127 7 0 993 1119 608073348 608073474 2.070000e-46 196
18 TraesCS2B01G250600 chr4B 92.883 281 19 1 667 947 409333098 409333377 8.780000e-110 407
19 TraesCS2B01G250600 chr4B 94.762 210 10 1 1 209 546159305 546159514 2.530000e-85 326
20 TraesCS2B01G250600 chr4B 94.258 209 12 0 1 209 409323781 409323989 1.180000e-83 320
21 TraesCS2B01G250600 chr4B 91.753 97 6 2 2340 2436 63023210 63023116 1.640000e-27 134
22 TraesCS2B01G250600 chr7B 92.171 281 21 1 667 947 628772328 628772607 1.900000e-106 396
23 TraesCS2B01G250600 chr7B 91.007 278 24 1 670 947 54281294 54281018 8.900000e-100 374
24 TraesCS2B01G250600 chr7B 96.172 209 8 0 1 209 330992491 330992283 2.510000e-90 342
25 TraesCS2B01G250600 chr7B 96.172 209 8 0 1 209 655012333 655012125 2.510000e-90 342
26 TraesCS2B01G250600 chr5B 91.815 281 22 1 667 947 134545182 134544903 8.840000e-105 390
27 TraesCS2B01G250600 chr5B 94.258 209 12 0 1 209 567584369 567584161 1.180000e-83 320
28 TraesCS2B01G250600 chr5B 91.919 99 6 2 2338 2436 576159259 576159163 1.270000e-28 137
29 TraesCS2B01G250600 chr5B 95.181 83 4 0 2338 2420 616722224 616722306 5.920000e-27 132
30 TraesCS2B01G250600 chr5A 90.391 281 26 1 667 947 482722301 482722022 4.140000e-98 368
31 TraesCS2B01G250600 chr3B 94.762 210 10 1 1 209 448326578 448326787 2.530000e-85 326
32 TraesCS2B01G250600 chr7A 94.258 209 12 0 1 209 67030361 67030153 1.180000e-83 320
33 TraesCS2B01G250600 chr7A 93.780 209 13 0 1 209 595127263 595127471 5.470000e-82 315
34 TraesCS2B01G250600 chr7A 97.531 81 2 0 2340 2420 68775362 68775442 3.540000e-29 139
35 TraesCS2B01G250600 chr1B 92.000 100 4 4 2338 2436 626148086 626147990 1.270000e-28 137
36 TraesCS2B01G250600 chr4A 96.341 82 3 0 2339 2420 701908082 701908163 4.570000e-28 135
37 TraesCS2B01G250600 chr7D 91.753 97 6 2 2340 2436 616332995 616332901 1.640000e-27 134
38 TraesCS2B01G250600 chr1A 95.294 85 3 1 2336 2420 483865308 483865391 1.640000e-27 134


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G250600 chr2B 260637800 260640433 2633 False 2011.0 3635 100.0000 1 2634 2 chr2B.!!$F1 2633
1 TraesCS2B01G250600 chr2D 207250170 207251776 1606 True 1141.0 1890 95.5540 977 2634 2 chr2D.!!$R1 1657
2 TraesCS2B01G250600 chr2A 257853859 257855388 1529 False 1106.5 1838 94.8940 998 2634 2 chr2A.!!$F1 1636
3 TraesCS2B01G250600 chr6B 703146339 703147683 1344 False 343.0 484 86.9335 978 1788 2 chr6B.!!$F3 810
4 TraesCS2B01G250600 chr6D 461387191 461388216 1025 False 313.5 431 87.9630 989 1704 2 chr6D.!!$F1 715
5 TraesCS2B01G250600 chr6A 608073348 608074354 1006 False 313.5 431 88.1695 993 1704 2 chr6A.!!$F1 711

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
747 748 0.037232 GTCGGGATTGGGGATCGATC 60.037 60.0 17.36 17.36 35.49 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2345 3127 0.034863 GGGGTACGCCTCCATTTCAA 60.035 55.0 21.18 0.0 34.11 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.117911 TGTTATCACATTTTCATGCGTAGG 57.882 37.500 0.00 0.00 33.05 3.18
24 25 3.698029 ATCACATTTTCATGCGTAGGC 57.302 42.857 0.00 0.00 40.52 3.93
37 38 2.285083 GCGTAGGCAACCAACATATCA 58.715 47.619 1.75 0.00 39.62 2.15
38 39 2.878406 GCGTAGGCAACCAACATATCAT 59.122 45.455 1.75 0.00 39.62 2.45
39 40 3.303990 GCGTAGGCAACCAACATATCATG 60.304 47.826 1.75 0.00 39.62 3.07
40 41 3.250762 CGTAGGCAACCAACATATCATGG 59.749 47.826 0.00 2.38 42.60 3.66
41 42 2.034124 AGGCAACCAACATATCATGGC 58.966 47.619 3.65 0.00 40.51 4.40
42 43 2.034124 GGCAACCAACATATCATGGCT 58.966 47.619 3.65 0.00 40.51 4.75
43 44 3.117550 AGGCAACCAACATATCATGGCTA 60.118 43.478 3.65 0.00 41.20 3.93
44 45 3.254166 GGCAACCAACATATCATGGCTAG 59.746 47.826 3.65 0.00 40.51 3.42
45 46 3.885297 GCAACCAACATATCATGGCTAGT 59.115 43.478 3.65 0.00 40.51 2.57
46 47 5.063204 GCAACCAACATATCATGGCTAGTA 58.937 41.667 3.65 0.00 40.51 1.82
47 48 5.180117 GCAACCAACATATCATGGCTAGTAG 59.820 44.000 3.65 0.00 40.51 2.57
48 49 5.489792 ACCAACATATCATGGCTAGTAGG 57.510 43.478 0.00 0.00 40.51 3.18
49 50 5.155161 ACCAACATATCATGGCTAGTAGGA 58.845 41.667 0.00 0.00 40.51 2.94
50 51 5.012148 ACCAACATATCATGGCTAGTAGGAC 59.988 44.000 0.00 0.00 40.51 3.85
51 52 5.012046 CCAACATATCATGGCTAGTAGGACA 59.988 44.000 0.00 0.00 33.60 4.02
52 53 6.296087 CCAACATATCATGGCTAGTAGGACAT 60.296 42.308 0.00 0.00 34.92 3.06
55 56 2.916702 CATGGCTAGTAGGACATGCA 57.083 50.000 0.00 0.00 44.35 3.96
56 57 2.487934 CATGGCTAGTAGGACATGCAC 58.512 52.381 0.00 0.00 44.35 4.57
57 58 1.567357 TGGCTAGTAGGACATGCACA 58.433 50.000 0.00 0.00 0.00 4.57
58 59 2.118679 TGGCTAGTAGGACATGCACAT 58.881 47.619 0.00 0.00 0.00 3.21
59 60 2.103094 TGGCTAGTAGGACATGCACATC 59.897 50.000 0.00 0.00 0.00 3.06
60 61 2.548920 GGCTAGTAGGACATGCACATCC 60.549 54.545 9.65 9.65 34.98 3.51
61 62 2.103094 GCTAGTAGGACATGCACATCCA 59.897 50.000 18.07 4.11 37.47 3.41
62 63 2.698855 AGTAGGACATGCACATCCAC 57.301 50.000 18.07 13.69 37.47 4.02
63 64 2.191400 AGTAGGACATGCACATCCACT 58.809 47.619 18.07 15.26 37.47 4.00
64 65 2.169352 AGTAGGACATGCACATCCACTC 59.831 50.000 18.07 9.05 37.47 3.51
65 66 1.283347 AGGACATGCACATCCACTCT 58.717 50.000 18.07 0.00 37.47 3.24
66 67 1.209019 AGGACATGCACATCCACTCTC 59.791 52.381 18.07 0.00 37.47 3.20
67 68 1.209019 GGACATGCACATCCACTCTCT 59.791 52.381 12.30 0.00 34.87 3.10
68 69 2.355513 GGACATGCACATCCACTCTCTT 60.356 50.000 12.30 0.00 34.87 2.85
69 70 3.341823 GACATGCACATCCACTCTCTTT 58.658 45.455 0.00 0.00 0.00 2.52
70 71 3.755378 GACATGCACATCCACTCTCTTTT 59.245 43.478 0.00 0.00 0.00 2.27
71 72 3.755378 ACATGCACATCCACTCTCTTTTC 59.245 43.478 0.00 0.00 0.00 2.29
72 73 3.777106 TGCACATCCACTCTCTTTTCT 57.223 42.857 0.00 0.00 0.00 2.52
73 74 4.890158 TGCACATCCACTCTCTTTTCTA 57.110 40.909 0.00 0.00 0.00 2.10
74 75 5.227569 TGCACATCCACTCTCTTTTCTAA 57.772 39.130 0.00 0.00 0.00 2.10
75 76 5.620206 TGCACATCCACTCTCTTTTCTAAA 58.380 37.500 0.00 0.00 0.00 1.85
76 77 6.061441 TGCACATCCACTCTCTTTTCTAAAA 58.939 36.000 0.00 0.00 0.00 1.52
77 78 6.716628 TGCACATCCACTCTCTTTTCTAAAAT 59.283 34.615 0.00 0.00 0.00 1.82
78 79 7.094634 TGCACATCCACTCTCTTTTCTAAAATC 60.095 37.037 0.00 0.00 0.00 2.17
79 80 7.120432 GCACATCCACTCTCTTTTCTAAAATCT 59.880 37.037 0.00 0.00 0.00 2.40
80 81 8.449397 CACATCCACTCTCTTTTCTAAAATCTG 58.551 37.037 0.00 0.00 0.00 2.90
81 82 7.609532 ACATCCACTCTCTTTTCTAAAATCTGG 59.390 37.037 0.00 0.00 0.00 3.86
82 83 6.476378 TCCACTCTCTTTTCTAAAATCTGGG 58.524 40.000 0.00 0.00 0.00 4.45
83 84 6.044404 TCCACTCTCTTTTCTAAAATCTGGGT 59.956 38.462 0.00 0.00 0.00 4.51
84 85 6.150140 CCACTCTCTTTTCTAAAATCTGGGTG 59.850 42.308 0.00 0.00 0.00 4.61
85 86 5.707764 ACTCTCTTTTCTAAAATCTGGGTGC 59.292 40.000 0.00 0.00 0.00 5.01
86 87 5.880901 TCTCTTTTCTAAAATCTGGGTGCT 58.119 37.500 0.00 0.00 0.00 4.40
87 88 7.016153 TCTCTTTTCTAAAATCTGGGTGCTA 57.984 36.000 0.00 0.00 0.00 3.49
88 89 7.106239 TCTCTTTTCTAAAATCTGGGTGCTAG 58.894 38.462 0.00 0.00 0.00 3.42
89 90 6.779860 TCTTTTCTAAAATCTGGGTGCTAGT 58.220 36.000 0.00 0.00 0.00 2.57
90 91 7.231467 TCTTTTCTAAAATCTGGGTGCTAGTT 58.769 34.615 0.00 0.00 0.00 2.24
91 92 8.380099 TCTTTTCTAAAATCTGGGTGCTAGTTA 58.620 33.333 0.00 0.00 0.00 2.24
92 93 9.178758 CTTTTCTAAAATCTGGGTGCTAGTTAT 57.821 33.333 0.00 0.00 0.00 1.89
93 94 8.732746 TTTCTAAAATCTGGGTGCTAGTTATC 57.267 34.615 0.00 0.00 0.00 1.75
94 95 6.827727 TCTAAAATCTGGGTGCTAGTTATCC 58.172 40.000 0.00 0.00 0.00 2.59
95 96 3.753294 AATCTGGGTGCTAGTTATCCG 57.247 47.619 0.00 0.00 0.00 4.18
96 97 2.154567 TCTGGGTGCTAGTTATCCGT 57.845 50.000 0.00 0.00 0.00 4.69
97 98 2.463752 TCTGGGTGCTAGTTATCCGTT 58.536 47.619 0.00 0.00 0.00 4.44
98 99 2.429610 TCTGGGTGCTAGTTATCCGTTC 59.570 50.000 0.00 0.00 0.00 3.95
99 100 1.135527 TGGGTGCTAGTTATCCGTTCG 59.864 52.381 0.00 0.00 0.00 3.95
100 101 1.406539 GGGTGCTAGTTATCCGTTCGA 59.593 52.381 0.00 0.00 0.00 3.71
101 102 2.035576 GGGTGCTAGTTATCCGTTCGAT 59.964 50.000 0.00 0.00 34.73 3.59
102 103 3.492137 GGGTGCTAGTTATCCGTTCGATT 60.492 47.826 0.00 0.00 31.92 3.34
103 104 3.734735 GGTGCTAGTTATCCGTTCGATTC 59.265 47.826 0.00 0.00 31.92 2.52
104 105 3.421231 GTGCTAGTTATCCGTTCGATTCG 59.579 47.826 0.00 0.00 31.92 3.34
105 106 3.313249 TGCTAGTTATCCGTTCGATTCGA 59.687 43.478 4.29 4.29 31.92 3.71
106 107 4.023450 TGCTAGTTATCCGTTCGATTCGAT 60.023 41.667 9.96 0.00 35.23 3.59
107 108 4.321217 GCTAGTTATCCGTTCGATTCGATG 59.679 45.833 9.96 5.77 35.23 3.84
108 109 3.639538 AGTTATCCGTTCGATTCGATGG 58.360 45.455 17.30 17.30 35.23 3.51
109 110 2.060326 TATCCGTTCGATTCGATGGC 57.940 50.000 18.17 8.63 35.23 4.40
110 111 0.104120 ATCCGTTCGATTCGATGGCA 59.896 50.000 18.17 10.65 35.23 4.92
111 112 0.104120 TCCGTTCGATTCGATGGCAT 59.896 50.000 18.17 0.00 35.23 4.40
112 113 0.508641 CCGTTCGATTCGATGGCATC 59.491 55.000 17.58 17.58 35.23 3.91
113 114 1.208259 CGTTCGATTCGATGGCATCA 58.792 50.000 25.88 9.08 35.23 3.07
114 115 1.190984 CGTTCGATTCGATGGCATCAG 59.809 52.381 25.88 18.08 35.23 2.90
115 116 1.070309 GTTCGATTCGATGGCATCAGC 60.070 52.381 25.88 10.33 35.23 4.26
128 129 3.475566 GCATCAGCCACTACAATAGGA 57.524 47.619 0.00 0.00 33.58 2.94
129 130 4.013267 GCATCAGCCACTACAATAGGAT 57.987 45.455 0.00 0.00 33.58 3.24
130 131 3.750130 GCATCAGCCACTACAATAGGATG 59.250 47.826 0.00 0.00 40.06 3.51
131 132 4.321718 CATCAGCCACTACAATAGGATGG 58.678 47.826 0.00 0.00 39.22 3.51
136 137 4.156455 CCACTACAATAGGATGGCAAGT 57.844 45.455 0.00 0.00 0.00 3.16
137 138 5.290493 CCACTACAATAGGATGGCAAGTA 57.710 43.478 0.00 0.00 0.00 2.24
138 139 5.680619 CCACTACAATAGGATGGCAAGTAA 58.319 41.667 0.00 0.00 0.00 2.24
139 140 6.299141 CCACTACAATAGGATGGCAAGTAAT 58.701 40.000 0.00 0.00 0.00 1.89
140 141 7.450074 CCACTACAATAGGATGGCAAGTAATA 58.550 38.462 0.00 0.00 0.00 0.98
141 142 7.604164 CCACTACAATAGGATGGCAAGTAATAG 59.396 40.741 0.00 0.00 0.00 1.73
142 143 7.604164 CACTACAATAGGATGGCAAGTAATAGG 59.396 40.741 0.00 0.00 0.00 2.57
143 144 6.515512 ACAATAGGATGGCAAGTAATAGGT 57.484 37.500 0.00 0.00 0.00 3.08
144 145 6.911308 ACAATAGGATGGCAAGTAATAGGTT 58.089 36.000 0.00 0.00 0.00 3.50
145 146 8.041143 ACAATAGGATGGCAAGTAATAGGTTA 57.959 34.615 0.00 0.00 0.00 2.85
146 147 8.499406 ACAATAGGATGGCAAGTAATAGGTTAA 58.501 33.333 0.00 0.00 0.00 2.01
147 148 8.784043 CAATAGGATGGCAAGTAATAGGTTAAC 58.216 37.037 0.00 0.00 0.00 2.01
148 149 6.321821 AGGATGGCAAGTAATAGGTTAACA 57.678 37.500 8.10 0.00 0.00 2.41
149 150 6.911308 AGGATGGCAAGTAATAGGTTAACAT 58.089 36.000 8.10 2.34 0.00 2.71
150 151 6.772716 AGGATGGCAAGTAATAGGTTAACATG 59.227 38.462 8.10 0.00 0.00 3.21
151 152 6.016276 GGATGGCAAGTAATAGGTTAACATGG 60.016 42.308 8.10 0.00 0.00 3.66
152 153 5.822204 TGGCAAGTAATAGGTTAACATGGT 58.178 37.500 8.10 0.00 0.00 3.55
153 154 5.650266 TGGCAAGTAATAGGTTAACATGGTG 59.350 40.000 8.10 0.00 0.00 4.17
154 155 5.067283 GGCAAGTAATAGGTTAACATGGTGG 59.933 44.000 8.10 0.00 0.00 4.61
155 156 5.449999 GCAAGTAATAGGTTAACATGGTGGC 60.450 44.000 8.10 0.00 0.00 5.01
156 157 5.444744 AGTAATAGGTTAACATGGTGGCA 57.555 39.130 8.10 0.00 0.00 4.92
157 158 5.437060 AGTAATAGGTTAACATGGTGGCAG 58.563 41.667 8.10 0.00 0.00 4.85
158 159 4.316025 AATAGGTTAACATGGTGGCAGT 57.684 40.909 8.10 0.00 0.00 4.40
159 160 2.675658 AGGTTAACATGGTGGCAGTT 57.324 45.000 8.10 0.00 0.00 3.16
160 161 3.799432 AGGTTAACATGGTGGCAGTTA 57.201 42.857 8.10 0.00 0.00 2.24
161 162 4.107127 AGGTTAACATGGTGGCAGTTAA 57.893 40.909 8.10 5.89 35.90 2.01
165 166 3.726291 AACATGGTGGCAGTTAACAAC 57.274 42.857 8.61 0.00 0.00 3.32
166 167 2.660572 ACATGGTGGCAGTTAACAACA 58.339 42.857 8.61 0.57 38.87 3.33
167 168 3.027412 ACATGGTGGCAGTTAACAACAA 58.973 40.909 8.61 0.00 37.90 2.83
168 169 3.181480 ACATGGTGGCAGTTAACAACAAC 60.181 43.478 8.61 6.82 37.90 3.32
169 170 1.402259 TGGTGGCAGTTAACAACAACG 59.598 47.619 8.61 0.00 30.08 4.10
170 171 1.671845 GGTGGCAGTTAACAACAACGA 59.328 47.619 8.61 0.00 33.50 3.85
171 172 2.292292 GGTGGCAGTTAACAACAACGAT 59.708 45.455 8.61 0.00 33.50 3.73
172 173 3.499157 GGTGGCAGTTAACAACAACGATA 59.501 43.478 8.61 0.00 33.50 2.92
173 174 4.378046 GGTGGCAGTTAACAACAACGATAG 60.378 45.833 8.61 0.00 46.19 2.08
174 175 3.749088 TGGCAGTTAACAACAACGATAGG 59.251 43.478 8.61 0.00 43.77 2.57
175 176 3.749609 GGCAGTTAACAACAACGATAGGT 59.250 43.478 8.61 0.00 43.77 3.08
186 187 2.631418 ACGATAGGTGACAACTGACG 57.369 50.000 15.85 15.85 43.77 4.35
187 188 1.884579 ACGATAGGTGACAACTGACGT 59.115 47.619 16.88 16.88 43.77 4.34
188 189 2.295349 ACGATAGGTGACAACTGACGTT 59.705 45.455 16.88 5.98 43.77 3.99
189 190 3.503363 ACGATAGGTGACAACTGACGTTA 59.497 43.478 16.88 0.00 43.77 3.18
190 191 4.096311 CGATAGGTGACAACTGACGTTAG 58.904 47.826 2.34 5.69 0.00 2.34
191 192 4.142752 CGATAGGTGACAACTGACGTTAGA 60.143 45.833 15.04 0.00 0.00 2.10
192 193 3.366440 AGGTGACAACTGACGTTAGAC 57.634 47.619 15.04 0.91 0.00 2.59
193 194 2.691526 AGGTGACAACTGACGTTAGACA 59.308 45.455 15.04 5.88 0.00 3.41
194 195 2.793232 GGTGACAACTGACGTTAGACAC 59.207 50.000 15.04 15.74 32.38 3.67
195 196 2.793232 GTGACAACTGACGTTAGACACC 59.207 50.000 15.04 1.53 0.00 4.16
196 197 2.427812 TGACAACTGACGTTAGACACCA 59.572 45.455 15.04 4.06 0.00 4.17
197 198 3.050619 GACAACTGACGTTAGACACCAG 58.949 50.000 15.04 5.47 0.00 4.00
198 199 2.429610 ACAACTGACGTTAGACACCAGT 59.570 45.455 15.04 6.16 39.49 4.00
199 200 2.794910 CAACTGACGTTAGACACCAGTG 59.205 50.000 15.04 0.00 38.03 3.66
685 686 2.787473 TGGCAACCAGATAAGACAGG 57.213 50.000 0.00 0.00 0.00 4.00
686 687 1.340017 TGGCAACCAGATAAGACAGGC 60.340 52.381 0.00 0.00 0.00 4.85
687 688 1.009829 GCAACCAGATAAGACAGGCG 58.990 55.000 0.00 0.00 0.00 5.52
688 689 1.405526 GCAACCAGATAAGACAGGCGA 60.406 52.381 0.00 0.00 0.00 5.54
689 690 2.743183 GCAACCAGATAAGACAGGCGAT 60.743 50.000 0.00 0.00 0.00 4.58
690 691 2.868583 CAACCAGATAAGACAGGCGATG 59.131 50.000 0.00 0.00 0.00 3.84
691 692 1.414181 ACCAGATAAGACAGGCGATGG 59.586 52.381 0.00 0.00 0.00 3.51
692 693 1.414181 CCAGATAAGACAGGCGATGGT 59.586 52.381 0.00 0.00 0.00 3.55
693 694 2.477825 CAGATAAGACAGGCGATGGTG 58.522 52.381 0.00 0.00 0.00 4.17
694 695 1.414181 AGATAAGACAGGCGATGGTGG 59.586 52.381 0.00 0.00 0.00 4.61
695 696 1.139058 GATAAGACAGGCGATGGTGGT 59.861 52.381 0.00 0.00 0.00 4.16
696 697 1.855295 TAAGACAGGCGATGGTGGTA 58.145 50.000 0.00 0.00 0.00 3.25
697 698 0.537188 AAGACAGGCGATGGTGGTAG 59.463 55.000 0.00 0.00 0.00 3.18
698 699 1.144057 GACAGGCGATGGTGGTAGG 59.856 63.158 0.00 0.00 0.00 3.18
699 700 2.311688 GACAGGCGATGGTGGTAGGG 62.312 65.000 0.00 0.00 0.00 3.53
700 701 2.768344 AGGCGATGGTGGTAGGGG 60.768 66.667 0.00 0.00 0.00 4.79
701 702 3.087906 GGCGATGGTGGTAGGGGT 61.088 66.667 0.00 0.00 0.00 4.95
702 703 2.676265 GGCGATGGTGGTAGGGGTT 61.676 63.158 0.00 0.00 0.00 4.11
703 704 1.153229 GCGATGGTGGTAGGGGTTC 60.153 63.158 0.00 0.00 0.00 3.62
704 705 1.143183 CGATGGTGGTAGGGGTTCG 59.857 63.158 0.00 0.00 0.00 3.95
705 706 1.324740 CGATGGTGGTAGGGGTTCGA 61.325 60.000 0.00 0.00 0.00 3.71
706 707 0.464452 GATGGTGGTAGGGGTTCGAG 59.536 60.000 0.00 0.00 0.00 4.04
707 708 0.042131 ATGGTGGTAGGGGTTCGAGA 59.958 55.000 0.00 0.00 0.00 4.04
708 709 0.613853 TGGTGGTAGGGGTTCGAGAG 60.614 60.000 0.00 0.00 0.00 3.20
709 710 1.328430 GGTGGTAGGGGTTCGAGAGG 61.328 65.000 0.00 0.00 0.00 3.69
710 711 0.614134 GTGGTAGGGGTTCGAGAGGT 60.614 60.000 0.00 0.00 0.00 3.85
711 712 0.613853 TGGTAGGGGTTCGAGAGGTG 60.614 60.000 0.00 0.00 0.00 4.00
712 713 1.328430 GGTAGGGGTTCGAGAGGTGG 61.328 65.000 0.00 0.00 0.00 4.61
713 714 1.001248 TAGGGGTTCGAGAGGTGGG 59.999 63.158 0.00 0.00 0.00 4.61
714 715 1.512201 TAGGGGTTCGAGAGGTGGGA 61.512 60.000 0.00 0.00 0.00 4.37
715 716 2.359967 GGGGTTCGAGAGGTGGGAG 61.360 68.421 0.00 0.00 0.00 4.30
716 717 1.305046 GGGTTCGAGAGGTGGGAGA 60.305 63.158 0.00 0.00 0.00 3.71
717 718 0.903454 GGGTTCGAGAGGTGGGAGAA 60.903 60.000 0.00 0.00 0.00 2.87
718 719 0.533032 GGTTCGAGAGGTGGGAGAAG 59.467 60.000 0.00 0.00 0.00 2.85
719 720 1.546961 GTTCGAGAGGTGGGAGAAGA 58.453 55.000 0.00 0.00 0.00 2.87
720 721 2.104170 GTTCGAGAGGTGGGAGAAGAT 58.896 52.381 0.00 0.00 0.00 2.40
721 722 1.769026 TCGAGAGGTGGGAGAAGATG 58.231 55.000 0.00 0.00 0.00 2.90
722 723 0.749649 CGAGAGGTGGGAGAAGATGG 59.250 60.000 0.00 0.00 0.00 3.51
723 724 0.467804 GAGAGGTGGGAGAAGATGGC 59.532 60.000 0.00 0.00 0.00 4.40
724 725 1.144936 GAGGTGGGAGAAGATGGCG 59.855 63.158 0.00 0.00 0.00 5.69
725 726 2.190578 GGTGGGAGAAGATGGCGG 59.809 66.667 0.00 0.00 0.00 6.13
726 727 2.514824 GTGGGAGAAGATGGCGGC 60.515 66.667 0.00 0.00 0.00 6.53
727 728 3.008517 TGGGAGAAGATGGCGGCA 61.009 61.111 16.34 16.34 0.00 5.69
728 729 2.203126 GGGAGAAGATGGCGGCAG 60.203 66.667 19.29 0.00 0.00 4.85
729 730 2.586792 GGAGAAGATGGCGGCAGT 59.413 61.111 19.29 4.00 0.00 4.40
730 731 1.522580 GGAGAAGATGGCGGCAGTC 60.523 63.158 19.29 14.37 0.00 3.51
731 732 1.880340 GAGAAGATGGCGGCAGTCG 60.880 63.158 19.29 0.00 42.76 4.18
732 733 2.892425 GAAGATGGCGGCAGTCGG 60.892 66.667 19.29 0.00 39.69 4.79
733 734 4.473520 AAGATGGCGGCAGTCGGG 62.474 66.667 19.29 0.00 39.69 5.14
735 736 4.241555 GATGGCGGCAGTCGGGAT 62.242 66.667 19.29 0.00 39.69 3.85
736 737 3.757248 GATGGCGGCAGTCGGGATT 62.757 63.158 19.29 0.00 39.69 3.01
737 738 4.776322 TGGCGGCAGTCGGGATTG 62.776 66.667 7.97 0.00 39.69 2.67
740 741 4.856801 CGGCAGTCGGGATTGGGG 62.857 72.222 0.00 0.00 34.75 4.96
741 742 3.407967 GGCAGTCGGGATTGGGGA 61.408 66.667 0.00 0.00 0.00 4.81
742 743 2.757124 GGCAGTCGGGATTGGGGAT 61.757 63.158 0.00 0.00 0.00 3.85
743 744 1.227973 GCAGTCGGGATTGGGGATC 60.228 63.158 0.00 0.00 0.00 3.36
744 745 1.069765 CAGTCGGGATTGGGGATCG 59.930 63.158 0.00 0.00 35.49 3.69
745 746 1.075525 AGTCGGGATTGGGGATCGA 60.076 57.895 0.00 0.00 35.49 3.59
746 747 0.471971 AGTCGGGATTGGGGATCGAT 60.472 55.000 0.00 0.00 35.49 3.59
747 748 0.037232 GTCGGGATTGGGGATCGATC 60.037 60.000 17.36 17.36 35.49 3.69
748 749 1.079819 CGGGATTGGGGATCGATCG 60.080 63.158 18.81 9.36 37.18 3.69
749 750 1.296715 GGGATTGGGGATCGATCGG 59.703 63.158 18.81 0.00 37.18 4.18
750 751 1.192146 GGGATTGGGGATCGATCGGA 61.192 60.000 18.81 2.25 37.18 4.55
751 752 0.247736 GGATTGGGGATCGATCGGAG 59.752 60.000 18.81 0.00 37.18 4.63
752 753 0.247736 GATTGGGGATCGATCGGAGG 59.752 60.000 18.81 0.00 0.00 4.30
753 754 1.831652 ATTGGGGATCGATCGGAGGC 61.832 60.000 18.81 4.78 0.00 4.70
754 755 3.696676 GGGGATCGATCGGAGGCC 61.697 72.222 18.81 13.32 0.00 5.19
772 773 3.134127 GGGACGGCTGGATTGTGC 61.134 66.667 0.00 0.00 0.00 4.57
773 774 3.499737 GGACGGCTGGATTGTGCG 61.500 66.667 0.00 0.00 0.00 5.34
774 775 3.499737 GACGGCTGGATTGTGCGG 61.500 66.667 0.00 0.00 35.95 5.69
777 778 2.676471 GGCTGGATTGTGCGGGTT 60.676 61.111 0.00 0.00 0.00 4.11
778 779 2.568090 GCTGGATTGTGCGGGTTG 59.432 61.111 0.00 0.00 0.00 3.77
779 780 2.568090 CTGGATTGTGCGGGTTGC 59.432 61.111 0.00 0.00 46.70 4.17
790 791 4.410400 GGGTTGCGGGGTCCTCTG 62.410 72.222 0.00 0.00 0.00 3.35
791 792 4.410400 GGTTGCGGGGTCCTCTGG 62.410 72.222 0.00 0.00 0.00 3.86
800 801 3.083997 GTCCTCTGGCCCGGACAT 61.084 66.667 23.62 0.00 46.98 3.06
801 802 3.083349 TCCTCTGGCCCGGACATG 61.083 66.667 0.73 0.00 0.00 3.21
802 803 4.864334 CCTCTGGCCCGGACATGC 62.864 72.222 0.73 0.00 0.00 4.06
813 814 4.875713 GACATGCGGGGCGGGATT 62.876 66.667 0.00 0.00 0.00 3.01
814 815 3.469863 GACATGCGGGGCGGGATTA 62.470 63.158 0.00 0.00 0.00 1.75
815 816 2.978010 CATGCGGGGCGGGATTAC 60.978 66.667 0.00 0.00 0.00 1.89
816 817 4.265056 ATGCGGGGCGGGATTACC 62.265 66.667 0.00 0.00 0.00 2.85
819 820 3.788145 CGGGGCGGGATTACCACA 61.788 66.667 0.00 0.00 40.22 4.17
820 821 2.124445 GGGGCGGGATTACCACAC 60.124 66.667 0.00 0.00 40.22 3.82
821 822 2.672295 GGGCGGGATTACCACACA 59.328 61.111 0.00 0.00 40.22 3.72
822 823 1.747745 GGGCGGGATTACCACACAC 60.748 63.158 0.00 0.00 40.22 3.82
823 824 1.747745 GGCGGGATTACCACACACC 60.748 63.158 0.00 0.00 40.22 4.16
824 825 2.104253 GCGGGATTACCACACACCG 61.104 63.158 0.00 0.00 43.81 4.94
825 826 1.448893 CGGGATTACCACACACCGG 60.449 63.158 0.00 0.00 40.22 5.28
826 827 1.890625 CGGGATTACCACACACCGGA 61.891 60.000 9.46 0.00 40.22 5.14
827 828 0.544697 GGGATTACCACACACCGGAT 59.455 55.000 9.46 0.00 39.85 4.18
828 829 1.064979 GGGATTACCACACACCGGATT 60.065 52.381 9.46 0.00 39.85 3.01
829 830 2.619590 GGGATTACCACACACCGGATTT 60.620 50.000 9.46 0.00 39.85 2.17
830 831 2.422127 GGATTACCACACACCGGATTTG 59.578 50.000 9.46 4.04 35.97 2.32
831 832 1.240256 TTACCACACACCGGATTTGC 58.760 50.000 9.46 0.00 0.00 3.68
832 833 0.951525 TACCACACACCGGATTTGCG 60.952 55.000 9.46 0.00 0.00 4.85
833 834 2.560861 CACACACCGGATTTGCGG 59.439 61.111 9.46 9.09 0.00 5.69
834 835 2.671619 ACACACCGGATTTGCGGG 60.672 61.111 9.46 6.47 42.39 6.13
836 837 2.359478 ACACCGGATTTGCGGGTC 60.359 61.111 9.46 0.00 46.21 4.46
837 838 3.496131 CACCGGATTTGCGGGTCG 61.496 66.667 9.46 0.00 46.21 4.79
838 839 4.011517 ACCGGATTTGCGGGTCGT 62.012 61.111 9.46 0.00 46.21 4.34
839 840 3.496131 CCGGATTTGCGGGTCGTG 61.496 66.667 0.00 0.00 32.60 4.35
840 841 4.160635 CGGATTTGCGGGTCGTGC 62.161 66.667 0.00 0.00 0.00 5.34
841 842 3.810896 GGATTTGCGGGTCGTGCC 61.811 66.667 0.00 0.00 0.00 5.01
842 843 2.746277 GATTTGCGGGTCGTGCCT 60.746 61.111 0.00 0.00 37.43 4.75
843 844 2.282180 ATTTGCGGGTCGTGCCTT 60.282 55.556 0.00 0.00 37.43 4.35
844 845 1.862602 GATTTGCGGGTCGTGCCTTT 61.863 55.000 0.00 0.00 37.43 3.11
845 846 2.141122 ATTTGCGGGTCGTGCCTTTG 62.141 55.000 0.00 0.00 37.43 2.77
846 847 4.555709 TGCGGGTCGTGCCTTTGT 62.556 61.111 0.00 0.00 37.43 2.83
847 848 4.025401 GCGGGTCGTGCCTTTGTG 62.025 66.667 0.00 0.00 37.43 3.33
848 849 4.025401 CGGGTCGTGCCTTTGTGC 62.025 66.667 0.00 0.00 37.43 4.57
849 850 4.025401 GGGTCGTGCCTTTGTGCG 62.025 66.667 0.00 0.00 37.43 5.34
850 851 4.683334 GGTCGTGCCTTTGTGCGC 62.683 66.667 0.00 0.00 38.37 6.09
851 852 4.683334 GTCGTGCCTTTGTGCGCC 62.683 66.667 4.18 0.00 38.52 6.53
884 885 3.728373 GGGCGGGTTCCTGTCCAT 61.728 66.667 15.61 0.00 0.00 3.41
885 886 2.438434 GGCGGGTTCCTGTCCATG 60.438 66.667 0.00 0.00 0.00 3.66
886 887 3.134127 GCGGGTTCCTGTCCATGC 61.134 66.667 0.00 0.00 0.00 4.06
887 888 2.438434 CGGGTTCCTGTCCATGCC 60.438 66.667 0.00 0.00 0.00 4.40
888 889 2.763215 GGGTTCCTGTCCATGCCA 59.237 61.111 0.00 0.00 0.00 4.92
889 890 1.678970 GGGTTCCTGTCCATGCCAC 60.679 63.158 0.00 0.00 0.00 5.01
890 891 1.074775 GGTTCCTGTCCATGCCACA 59.925 57.895 0.00 0.00 0.00 4.17
891 892 1.244019 GGTTCCTGTCCATGCCACAC 61.244 60.000 0.00 0.00 0.00 3.82
892 893 1.302431 TTCCTGTCCATGCCACACG 60.302 57.895 0.00 0.00 0.00 4.49
893 894 1.763546 TTCCTGTCCATGCCACACGA 61.764 55.000 0.00 0.00 0.00 4.35
894 895 1.742880 CCTGTCCATGCCACACGAG 60.743 63.158 0.00 0.00 0.00 4.18
895 896 1.742880 CTGTCCATGCCACACGAGG 60.743 63.158 0.00 0.00 0.00 4.63
907 908 4.539083 ACGAGGCGTGTGGCACAA 62.539 61.111 23.90 3.54 46.16 3.33
908 909 4.012895 CGAGGCGTGTGGCACAAC 62.013 66.667 23.90 17.20 44.16 3.32
909 910 2.591715 GAGGCGTGTGGCACAACT 60.592 61.111 23.90 19.95 44.16 3.16
910 911 1.301401 GAGGCGTGTGGCACAACTA 60.301 57.895 23.90 0.00 44.16 2.24
911 912 1.566018 GAGGCGTGTGGCACAACTAC 61.566 60.000 23.90 12.86 44.16 2.73
912 913 2.613506 GGCGTGTGGCACAACTACC 61.614 63.158 23.90 16.77 44.16 3.18
913 914 2.613506 GCGTGTGGCACAACTACCC 61.614 63.158 23.90 7.78 44.16 3.69
914 915 2.314647 CGTGTGGCACAACTACCCG 61.315 63.158 23.90 16.45 44.16 5.28
915 916 1.070105 GTGTGGCACAACTACCCGA 59.930 57.895 23.90 0.00 44.16 5.14
916 917 0.321298 GTGTGGCACAACTACCCGAT 60.321 55.000 23.90 0.00 44.16 4.18
917 918 1.066716 GTGTGGCACAACTACCCGATA 60.067 52.381 23.90 0.00 44.16 2.92
918 919 1.066716 TGTGGCACAACTACCCGATAC 60.067 52.381 19.74 0.00 44.16 2.24
919 920 1.066716 GTGGCACAACTACCCGATACA 60.067 52.381 13.86 0.00 44.16 2.29
920 921 1.066716 TGGCACAACTACCCGATACAC 60.067 52.381 0.00 0.00 31.92 2.90
921 922 1.648504 GCACAACTACCCGATACACC 58.351 55.000 0.00 0.00 0.00 4.16
922 923 1.066716 GCACAACTACCCGATACACCA 60.067 52.381 0.00 0.00 0.00 4.17
923 924 2.613691 CACAACTACCCGATACACCAC 58.386 52.381 0.00 0.00 0.00 4.16
924 925 2.028839 CACAACTACCCGATACACCACA 60.029 50.000 0.00 0.00 0.00 4.17
925 926 2.028748 ACAACTACCCGATACACCACAC 60.029 50.000 0.00 0.00 0.00 3.82
926 927 0.813184 ACTACCCGATACACCACACG 59.187 55.000 0.00 0.00 0.00 4.49
927 928 0.813184 CTACCCGATACACCACACGT 59.187 55.000 0.00 0.00 0.00 4.49
941 942 2.060326 ACACGTGTGACAGTTATCGG 57.940 50.000 22.71 0.00 0.00 4.18
942 943 1.336517 ACACGTGTGACAGTTATCGGG 60.337 52.381 22.71 0.00 0.00 5.14
943 944 1.068125 CACGTGTGACAGTTATCGGGA 60.068 52.381 7.58 0.00 0.00 5.14
944 945 1.068055 ACGTGTGACAGTTATCGGGAC 60.068 52.381 0.00 0.00 0.00 4.46
945 946 1.734707 CGTGTGACAGTTATCGGGACC 60.735 57.143 0.00 0.00 0.00 4.46
946 947 0.899720 TGTGACAGTTATCGGGACCC 59.100 55.000 0.00 0.00 0.00 4.46
947 948 0.177373 GTGACAGTTATCGGGACCCC 59.823 60.000 4.46 0.00 0.00 4.95
957 958 4.355720 GGGACCCCGTGTTTCCCC 62.356 72.222 0.00 0.00 43.07 4.81
958 959 4.355720 GGACCCCGTGTTTCCCCC 62.356 72.222 0.00 0.00 0.00 5.40
959 960 3.572222 GACCCCGTGTTTCCCCCA 61.572 66.667 0.00 0.00 0.00 4.96
960 961 3.855503 GACCCCGTGTTTCCCCCAC 62.856 68.421 0.00 0.00 0.00 4.61
961 962 3.576259 CCCCGTGTTTCCCCCACT 61.576 66.667 0.00 0.00 0.00 4.00
962 963 2.033602 CCCGTGTTTCCCCCACTC 59.966 66.667 0.00 0.00 0.00 3.51
963 964 2.358247 CCGTGTTTCCCCCACTCG 60.358 66.667 0.00 0.00 0.00 4.18
964 965 3.047877 CGTGTTTCCCCCACTCGC 61.048 66.667 0.00 0.00 0.00 5.03
965 966 3.047877 GTGTTTCCCCCACTCGCG 61.048 66.667 0.00 0.00 0.00 5.87
966 967 3.552384 TGTTTCCCCCACTCGCGT 61.552 61.111 5.77 0.00 0.00 6.01
967 968 2.208619 TGTTTCCCCCACTCGCGTA 61.209 57.895 5.77 0.00 0.00 4.42
968 969 1.004679 GTTTCCCCCACTCGCGTAA 60.005 57.895 5.77 0.00 0.00 3.18
969 970 0.603439 GTTTCCCCCACTCGCGTAAA 60.603 55.000 5.77 0.00 0.00 2.01
970 971 0.320946 TTTCCCCCACTCGCGTAAAG 60.321 55.000 5.77 0.00 0.00 1.85
971 972 1.186917 TTCCCCCACTCGCGTAAAGA 61.187 55.000 5.77 0.00 0.00 2.52
972 973 1.186917 TCCCCCACTCGCGTAAAGAA 61.187 55.000 5.77 0.00 0.00 2.52
973 974 0.320946 CCCCCACTCGCGTAAAGAAA 60.321 55.000 5.77 0.00 0.00 2.52
974 975 0.794473 CCCCACTCGCGTAAAGAAAC 59.206 55.000 5.77 0.00 0.00 2.78
975 976 0.437295 CCCACTCGCGTAAAGAAACG 59.563 55.000 5.77 0.00 45.58 3.60
985 986 0.314935 TAAAGAAACGTCTCCGCGGT 59.685 50.000 27.15 2.66 37.70 5.68
1049 1050 4.394712 GGTGGTCAGCGGGGTGAG 62.395 72.222 0.03 0.00 0.00 3.51
1102 1103 2.791170 GACCCCTACGTCGTCATCT 58.209 57.895 0.00 0.00 0.00 2.90
1141 1176 4.023980 ACTTTCCTGTCCGATCATCACTA 58.976 43.478 0.00 0.00 0.00 2.74
1306 2015 8.500773 GGTTAAGATTGTAAGTTCGATCAACAA 58.499 33.333 13.48 13.48 37.48 2.83
1352 2090 4.415881 AACTCACCGCCAATACATATCA 57.584 40.909 0.00 0.00 0.00 2.15
1453 2195 0.033796 CCAAGGATGACAGCATGGGT 60.034 55.000 6.83 0.00 43.62 4.51
1517 2259 2.997897 ACCTCAGCCACGTCCCTC 60.998 66.667 0.00 0.00 0.00 4.30
1537 2279 2.349843 CGACACCGTGATGAAGACG 58.650 57.895 5.28 0.00 36.56 4.18
1538 2280 0.109919 CGACACCGTGATGAAGACGA 60.110 55.000 5.28 0.00 39.21 4.20
1539 2281 1.618861 GACACCGTGATGAAGACGAG 58.381 55.000 5.28 0.00 39.21 4.18
1540 2282 1.199327 GACACCGTGATGAAGACGAGA 59.801 52.381 5.28 0.00 39.21 4.04
1771 2520 2.746362 GACTGGAATGTTGCTTCCTCTG 59.254 50.000 4.30 0.00 44.27 3.35
1836 2589 8.325787 AGATCATTACAGTGGGTGTTATGTAAA 58.674 33.333 0.00 0.00 43.66 2.01
1856 2638 7.083858 TGTAAAGCATGCAATAGACTTGTTTC 58.916 34.615 21.98 3.13 0.00 2.78
1869 2651 5.730550 AGACTTGTTTCGGTTCTGCATATA 58.269 37.500 0.00 0.00 0.00 0.86
1870 2652 5.581085 AGACTTGTTTCGGTTCTGCATATAC 59.419 40.000 0.00 0.00 0.00 1.47
1871 2653 4.328983 ACTTGTTTCGGTTCTGCATATACG 59.671 41.667 0.00 0.00 0.00 3.06
1872 2654 3.852286 TGTTTCGGTTCTGCATATACGT 58.148 40.909 0.00 0.00 0.00 3.57
2065 2847 3.065786 GCAGCAGCATTAACTGAGCATAA 59.934 43.478 0.00 0.00 40.25 1.90
2336 3118 8.532977 TTTAAATGGTTTATTGCAGCTTCTTC 57.467 30.769 0.00 0.00 0.00 2.87
2337 3119 5.990120 AATGGTTTATTGCAGCTTCTTCT 57.010 34.783 0.00 0.00 0.00 2.85
2338 3120 5.990120 ATGGTTTATTGCAGCTTCTTCTT 57.010 34.783 0.00 0.00 0.00 2.52
2339 3121 5.789643 TGGTTTATTGCAGCTTCTTCTTT 57.210 34.783 0.00 0.00 0.00 2.52
2340 3122 6.160576 TGGTTTATTGCAGCTTCTTCTTTT 57.839 33.333 0.00 0.00 0.00 2.27
2341 3123 6.581712 TGGTTTATTGCAGCTTCTTCTTTTT 58.418 32.000 0.00 0.00 0.00 1.94
2362 3144 3.926821 TTTTTGAAATGGAGGCGTACC 57.073 42.857 0.00 0.00 0.00 3.34
2363 3145 1.828979 TTTGAAATGGAGGCGTACCC 58.171 50.000 0.00 0.00 36.11 3.69
2364 3146 0.034863 TTGAAATGGAGGCGTACCCC 60.035 55.000 0.00 0.00 36.11 4.95
2365 3147 1.153025 GAAATGGAGGCGTACCCCC 60.153 63.158 0.00 0.00 36.11 5.40
2366 3148 2.935627 GAAATGGAGGCGTACCCCCG 62.936 65.000 0.00 0.00 36.11 5.73
2376 3158 4.815973 TACCCCCGGCCTCTGCAT 62.816 66.667 0.00 0.00 40.13 3.96
2379 3161 3.882326 CCCCGGCCTCTGCATCAT 61.882 66.667 0.00 0.00 40.13 2.45
2380 3162 2.593725 CCCGGCCTCTGCATCATG 60.594 66.667 0.00 0.00 40.13 3.07
2381 3163 2.507452 CCGGCCTCTGCATCATGA 59.493 61.111 0.00 0.00 40.13 3.07
2382 3164 1.072678 CCGGCCTCTGCATCATGAT 59.927 57.895 1.18 1.18 40.13 2.45
2383 3165 1.235281 CCGGCCTCTGCATCATGATG 61.235 60.000 28.04 28.04 41.60 3.07
2384 3166 0.250166 CGGCCTCTGCATCATGATGA 60.250 55.000 34.65 19.93 41.20 2.92
2385 3167 1.610886 CGGCCTCTGCATCATGATGAT 60.611 52.381 34.65 1.25 41.20 2.45
2393 3175 2.262572 CATCATGATGATGCATGCGG 57.737 50.000 28.37 0.00 46.37 5.69
2394 3176 0.526211 ATCATGATGATGCATGCGGC 59.474 50.000 14.09 7.96 44.08 6.53
2395 3177 1.080772 CATGATGATGCATGCGGCC 60.081 57.895 14.09 5.01 43.89 6.13
2396 3178 1.529713 ATGATGATGCATGCGGCCA 60.530 52.632 14.09 10.90 43.89 5.36
2397 3179 0.898326 ATGATGATGCATGCGGCCAT 60.898 50.000 14.09 15.20 43.89 4.40
2398 3180 1.211969 GATGATGCATGCGGCCATC 59.788 57.895 22.22 22.22 43.89 3.51
2399 3181 1.228459 ATGATGCATGCGGCCATCT 60.228 52.632 14.09 0.00 43.89 2.90
2400 3182 0.826256 ATGATGCATGCGGCCATCTT 60.826 50.000 14.09 5.81 43.89 2.40
2401 3183 0.179023 TGATGCATGCGGCCATCTTA 60.179 50.000 14.09 0.00 43.89 2.10
2402 3184 1.171308 GATGCATGCGGCCATCTTAT 58.829 50.000 14.09 0.00 43.89 1.73
2403 3185 1.542915 GATGCATGCGGCCATCTTATT 59.457 47.619 14.09 0.00 43.89 1.40
2404 3186 2.268762 TGCATGCGGCCATCTTATTA 57.731 45.000 14.09 0.00 43.89 0.98
2405 3187 2.580962 TGCATGCGGCCATCTTATTAA 58.419 42.857 14.09 0.00 43.89 1.40
2406 3188 2.293122 TGCATGCGGCCATCTTATTAAC 59.707 45.455 14.09 0.00 43.89 2.01
2407 3189 2.293122 GCATGCGGCCATCTTATTAACA 59.707 45.455 0.00 0.00 36.11 2.41
2408 3190 3.243367 GCATGCGGCCATCTTATTAACAA 60.243 43.478 0.00 0.00 36.11 2.83
2409 3191 4.559300 GCATGCGGCCATCTTATTAACAAT 60.559 41.667 0.00 0.00 36.11 2.71
2410 3192 4.829064 TGCGGCCATCTTATTAACAATC 57.171 40.909 2.24 0.00 0.00 2.67
2411 3193 3.568007 TGCGGCCATCTTATTAACAATCC 59.432 43.478 2.24 0.00 0.00 3.01
2412 3194 3.568007 GCGGCCATCTTATTAACAATCCA 59.432 43.478 2.24 0.00 0.00 3.41
2413 3195 4.320494 GCGGCCATCTTATTAACAATCCAG 60.320 45.833 2.24 0.00 0.00 3.86
2414 3196 5.063204 CGGCCATCTTATTAACAATCCAGA 58.937 41.667 2.24 0.00 0.00 3.86
2415 3197 5.530915 CGGCCATCTTATTAACAATCCAGAA 59.469 40.000 2.24 0.00 0.00 3.02
2416 3198 6.207417 CGGCCATCTTATTAACAATCCAGAAT 59.793 38.462 2.24 0.00 0.00 2.40
2417 3199 7.573843 CGGCCATCTTATTAACAATCCAGAATC 60.574 40.741 2.24 0.00 0.00 2.52
2418 3200 7.301054 GCCATCTTATTAACAATCCAGAATCG 58.699 38.462 0.00 0.00 0.00 3.34
2419 3201 7.041098 GCCATCTTATTAACAATCCAGAATCGT 60.041 37.037 0.00 0.00 0.00 3.73
2420 3202 8.840321 CCATCTTATTAACAATCCAGAATCGTT 58.160 33.333 0.00 0.00 0.00 3.85
2428 3210 6.604735 ACAATCCAGAATCGTTATTACAGC 57.395 37.500 0.00 0.00 0.00 4.40
2429 3211 6.349300 ACAATCCAGAATCGTTATTACAGCT 58.651 36.000 0.00 0.00 0.00 4.24
2430 3212 6.823689 ACAATCCAGAATCGTTATTACAGCTT 59.176 34.615 0.00 0.00 0.00 3.74
2431 3213 7.011482 ACAATCCAGAATCGTTATTACAGCTTC 59.989 37.037 0.00 0.00 0.00 3.86
2432 3214 6.222038 TCCAGAATCGTTATTACAGCTTCT 57.778 37.500 0.00 0.00 0.00 2.85
2433 3215 6.640518 TCCAGAATCGTTATTACAGCTTCTT 58.359 36.000 0.00 0.00 0.00 2.52
2542 3324 2.607568 TACCCCGAAAGCCATGCCA 61.608 57.895 0.00 0.00 0.00 4.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.448496 GCCTACGCATGAAAATGTGATAACA 60.448 40.000 0.00 0.00 36.06 2.41
1 2 4.970003 GCCTACGCATGAAAATGTGATAAC 59.030 41.667 0.00 0.00 36.06 1.89
2 3 4.637977 TGCCTACGCATGAAAATGTGATAA 59.362 37.500 0.00 0.00 41.12 1.75
3 4 4.195416 TGCCTACGCATGAAAATGTGATA 58.805 39.130 0.00 0.00 41.12 2.15
4 5 3.016031 TGCCTACGCATGAAAATGTGAT 58.984 40.909 0.00 0.00 41.12 3.06
5 6 2.431454 TGCCTACGCATGAAAATGTGA 58.569 42.857 0.00 0.00 41.12 3.58
6 7 2.916716 GTTGCCTACGCATGAAAATGTG 59.083 45.455 0.00 0.00 46.67 3.21
7 8 2.094752 GGTTGCCTACGCATGAAAATGT 60.095 45.455 0.00 0.00 46.67 2.71
8 9 2.094803 TGGTTGCCTACGCATGAAAATG 60.095 45.455 0.00 0.00 46.67 2.32
9 10 2.166829 TGGTTGCCTACGCATGAAAAT 58.833 42.857 0.00 0.00 46.67 1.82
11 12 1.268352 GTTGGTTGCCTACGCATGAAA 59.732 47.619 0.00 0.00 46.67 2.69
12 13 0.878416 GTTGGTTGCCTACGCATGAA 59.122 50.000 0.00 0.00 46.67 2.57
13 14 0.250510 TGTTGGTTGCCTACGCATGA 60.251 50.000 0.00 0.00 46.67 3.07
14 15 0.810648 ATGTTGGTTGCCTACGCATG 59.189 50.000 0.00 0.00 46.67 4.06
15 16 2.411628 TATGTTGGTTGCCTACGCAT 57.588 45.000 0.00 0.00 46.67 4.73
16 17 2.285083 GATATGTTGGTTGCCTACGCA 58.715 47.619 0.00 0.00 45.49 5.24
17 18 2.285083 TGATATGTTGGTTGCCTACGC 58.715 47.619 0.00 0.00 32.19 4.42
18 19 3.250762 CCATGATATGTTGGTTGCCTACG 59.749 47.826 0.00 0.00 32.19 3.51
19 20 3.004734 GCCATGATATGTTGGTTGCCTAC 59.995 47.826 0.00 0.00 35.34 3.18
20 21 3.117550 AGCCATGATATGTTGGTTGCCTA 60.118 43.478 0.00 0.00 35.34 3.93
21 22 2.034124 GCCATGATATGTTGGTTGCCT 58.966 47.619 0.00 0.00 35.34 4.75
22 23 2.034124 AGCCATGATATGTTGGTTGCC 58.966 47.619 0.00 0.00 35.34 4.52
23 24 3.885297 ACTAGCCATGATATGTTGGTTGC 59.115 43.478 0.00 0.00 35.34 4.17
24 25 5.702670 CCTACTAGCCATGATATGTTGGTTG 59.297 44.000 0.00 0.00 35.34 3.77
25 26 5.606749 TCCTACTAGCCATGATATGTTGGTT 59.393 40.000 0.00 0.19 35.34 3.67
26 27 5.012148 GTCCTACTAGCCATGATATGTTGGT 59.988 44.000 0.00 0.00 35.34 3.67
27 28 5.012046 TGTCCTACTAGCCATGATATGTTGG 59.988 44.000 0.00 0.00 36.03 3.77
28 29 6.101650 TGTCCTACTAGCCATGATATGTTG 57.898 41.667 0.00 0.00 0.00 3.33
29 30 6.705302 CATGTCCTACTAGCCATGATATGTT 58.295 40.000 0.00 0.00 37.47 2.71
30 31 5.337894 GCATGTCCTACTAGCCATGATATGT 60.338 44.000 13.95 0.00 37.47 2.29
31 32 5.114780 GCATGTCCTACTAGCCATGATATG 58.885 45.833 13.95 7.42 37.47 1.78
32 33 4.779489 TGCATGTCCTACTAGCCATGATAT 59.221 41.667 13.95 0.00 37.47 1.63
33 34 4.021104 GTGCATGTCCTACTAGCCATGATA 60.021 45.833 13.95 0.00 37.47 2.15
34 35 2.974794 TGCATGTCCTACTAGCCATGAT 59.025 45.455 13.95 0.00 37.47 2.45
35 36 2.103094 GTGCATGTCCTACTAGCCATGA 59.897 50.000 13.95 2.57 37.47 3.07
36 37 2.158914 TGTGCATGTCCTACTAGCCATG 60.159 50.000 0.00 8.55 38.14 3.66
37 38 2.118679 TGTGCATGTCCTACTAGCCAT 58.881 47.619 0.00 0.00 0.00 4.40
38 39 1.567357 TGTGCATGTCCTACTAGCCA 58.433 50.000 0.00 0.00 0.00 4.75
39 40 2.548920 GGATGTGCATGTCCTACTAGCC 60.549 54.545 11.83 0.00 0.00 3.93
40 41 2.103094 TGGATGTGCATGTCCTACTAGC 59.897 50.000 17.87 0.00 35.49 3.42
41 42 3.386078 AGTGGATGTGCATGTCCTACTAG 59.614 47.826 17.87 0.00 35.49 2.57
42 43 3.374764 AGTGGATGTGCATGTCCTACTA 58.625 45.455 17.87 0.00 35.49 1.82
43 44 2.169352 GAGTGGATGTGCATGTCCTACT 59.831 50.000 17.87 17.47 35.49 2.57
44 45 2.169352 AGAGTGGATGTGCATGTCCTAC 59.831 50.000 17.87 14.29 35.49 3.18
45 46 2.432146 GAGAGTGGATGTGCATGTCCTA 59.568 50.000 17.87 5.52 35.49 2.94
46 47 1.209019 GAGAGTGGATGTGCATGTCCT 59.791 52.381 17.87 2.72 35.49 3.85
47 48 1.209019 AGAGAGTGGATGTGCATGTCC 59.791 52.381 12.12 12.12 35.02 4.02
48 49 2.687700 AGAGAGTGGATGTGCATGTC 57.312 50.000 0.00 0.00 0.00 3.06
49 50 3.430042 AAAGAGAGTGGATGTGCATGT 57.570 42.857 0.00 0.00 0.00 3.21
50 51 4.008330 AGAAAAGAGAGTGGATGTGCATG 58.992 43.478 0.00 0.00 0.00 4.06
51 52 4.298103 AGAAAAGAGAGTGGATGTGCAT 57.702 40.909 0.00 0.00 0.00 3.96
52 53 3.777106 AGAAAAGAGAGTGGATGTGCA 57.223 42.857 0.00 0.00 0.00 4.57
53 54 6.560253 TTTTAGAAAAGAGAGTGGATGTGC 57.440 37.500 0.00 0.00 0.00 4.57
54 55 8.449397 CAGATTTTAGAAAAGAGAGTGGATGTG 58.551 37.037 0.00 0.00 0.00 3.21
55 56 7.609532 CCAGATTTTAGAAAAGAGAGTGGATGT 59.390 37.037 0.00 0.00 0.00 3.06
56 57 7.066766 CCCAGATTTTAGAAAAGAGAGTGGATG 59.933 40.741 0.00 0.00 0.00 3.51
57 58 7.115414 CCCAGATTTTAGAAAAGAGAGTGGAT 58.885 38.462 0.00 0.00 0.00 3.41
58 59 6.044404 ACCCAGATTTTAGAAAAGAGAGTGGA 59.956 38.462 0.00 0.00 0.00 4.02
59 60 6.150140 CACCCAGATTTTAGAAAAGAGAGTGG 59.850 42.308 0.00 0.00 0.00 4.00
60 61 6.348868 GCACCCAGATTTTAGAAAAGAGAGTG 60.349 42.308 0.00 0.00 0.00 3.51
61 62 5.707764 GCACCCAGATTTTAGAAAAGAGAGT 59.292 40.000 0.00 0.00 0.00 3.24
62 63 5.942826 AGCACCCAGATTTTAGAAAAGAGAG 59.057 40.000 0.00 0.00 0.00 3.20
63 64 5.880901 AGCACCCAGATTTTAGAAAAGAGA 58.119 37.500 0.00 0.00 0.00 3.10
64 65 6.881602 ACTAGCACCCAGATTTTAGAAAAGAG 59.118 38.462 0.00 0.00 0.00 2.85
65 66 6.779860 ACTAGCACCCAGATTTTAGAAAAGA 58.220 36.000 0.00 0.00 0.00 2.52
66 67 7.454260 AACTAGCACCCAGATTTTAGAAAAG 57.546 36.000 0.00 0.00 0.00 2.27
67 68 9.174166 GATAACTAGCACCCAGATTTTAGAAAA 57.826 33.333 0.00 0.00 0.00 2.29
68 69 7.773690 GGATAACTAGCACCCAGATTTTAGAAA 59.226 37.037 0.00 0.00 0.00 2.52
69 70 7.280356 GGATAACTAGCACCCAGATTTTAGAA 58.720 38.462 0.00 0.00 0.00 2.10
70 71 6.462487 CGGATAACTAGCACCCAGATTTTAGA 60.462 42.308 0.00 0.00 0.00 2.10
71 72 5.696724 CGGATAACTAGCACCCAGATTTTAG 59.303 44.000 0.00 0.00 0.00 1.85
72 73 5.129815 ACGGATAACTAGCACCCAGATTTTA 59.870 40.000 0.00 0.00 0.00 1.52
73 74 4.080526 ACGGATAACTAGCACCCAGATTTT 60.081 41.667 0.00 0.00 0.00 1.82
74 75 3.454812 ACGGATAACTAGCACCCAGATTT 59.545 43.478 0.00 0.00 0.00 2.17
75 76 3.039011 ACGGATAACTAGCACCCAGATT 58.961 45.455 0.00 0.00 0.00 2.40
76 77 2.679082 ACGGATAACTAGCACCCAGAT 58.321 47.619 0.00 0.00 0.00 2.90
77 78 2.154567 ACGGATAACTAGCACCCAGA 57.845 50.000 0.00 0.00 0.00 3.86
78 79 2.798499 CGAACGGATAACTAGCACCCAG 60.798 54.545 0.00 0.00 0.00 4.45
79 80 1.135527 CGAACGGATAACTAGCACCCA 59.864 52.381 0.00 0.00 0.00 4.51
80 81 1.406539 TCGAACGGATAACTAGCACCC 59.593 52.381 0.00 0.00 0.00 4.61
81 82 2.857592 TCGAACGGATAACTAGCACC 57.142 50.000 0.00 0.00 0.00 5.01
82 83 3.421231 CGAATCGAACGGATAACTAGCAC 59.579 47.826 0.00 0.00 34.08 4.40
83 84 3.313249 TCGAATCGAACGGATAACTAGCA 59.687 43.478 1.57 0.00 34.08 3.49
84 85 3.881795 TCGAATCGAACGGATAACTAGC 58.118 45.455 1.57 0.00 34.08 3.42
85 86 4.852104 CCATCGAATCGAACGGATAACTAG 59.148 45.833 16.51 0.00 39.99 2.57
86 87 4.790878 CCATCGAATCGAACGGATAACTA 58.209 43.478 16.51 0.00 39.99 2.24
87 88 3.639538 CCATCGAATCGAACGGATAACT 58.360 45.455 16.51 0.00 39.99 2.24
88 89 2.155155 GCCATCGAATCGAACGGATAAC 59.845 50.000 23.16 6.42 39.99 1.89
89 90 2.223852 TGCCATCGAATCGAACGGATAA 60.224 45.455 23.16 8.92 39.99 1.75
90 91 1.338655 TGCCATCGAATCGAACGGATA 59.661 47.619 23.16 11.43 39.99 2.59
91 92 0.104120 TGCCATCGAATCGAACGGAT 59.896 50.000 23.16 0.00 39.99 4.18
92 93 0.104120 ATGCCATCGAATCGAACGGA 59.896 50.000 23.16 12.50 39.99 4.69
93 94 0.508641 GATGCCATCGAATCGAACGG 59.491 55.000 10.12 14.37 39.99 4.44
94 95 1.190984 CTGATGCCATCGAATCGAACG 59.809 52.381 10.12 3.84 39.99 3.95
95 96 1.070309 GCTGATGCCATCGAATCGAAC 60.070 52.381 10.12 3.01 39.99 3.95
96 97 1.220529 GCTGATGCCATCGAATCGAA 58.779 50.000 10.12 0.00 39.99 3.71
97 98 2.904664 GCTGATGCCATCGAATCGA 58.095 52.632 8.12 8.12 41.13 3.59
108 109 3.475566 TCCTATTGTAGTGGCTGATGC 57.524 47.619 0.00 0.00 38.76 3.91
109 110 4.321718 CCATCCTATTGTAGTGGCTGATG 58.678 47.826 0.00 0.00 0.00 3.07
110 111 4.630644 CCATCCTATTGTAGTGGCTGAT 57.369 45.455 0.00 0.00 0.00 2.90
115 116 4.156455 ACTTGCCATCCTATTGTAGTGG 57.844 45.455 0.00 0.00 0.00 4.00
116 117 7.604164 CCTATTACTTGCCATCCTATTGTAGTG 59.396 40.741 0.00 0.00 0.00 2.74
117 118 7.292591 ACCTATTACTTGCCATCCTATTGTAGT 59.707 37.037 0.00 0.00 0.00 2.73
118 119 7.680730 ACCTATTACTTGCCATCCTATTGTAG 58.319 38.462 0.00 0.00 0.00 2.74
119 120 7.626999 ACCTATTACTTGCCATCCTATTGTA 57.373 36.000 0.00 0.00 0.00 2.41
120 121 6.515512 ACCTATTACTTGCCATCCTATTGT 57.484 37.500 0.00 0.00 0.00 2.71
121 122 8.784043 GTTAACCTATTACTTGCCATCCTATTG 58.216 37.037 0.00 0.00 0.00 1.90
122 123 8.499406 TGTTAACCTATTACTTGCCATCCTATT 58.501 33.333 2.48 0.00 0.00 1.73
123 124 8.041143 TGTTAACCTATTACTTGCCATCCTAT 57.959 34.615 2.48 0.00 0.00 2.57
124 125 7.440505 TGTTAACCTATTACTTGCCATCCTA 57.559 36.000 2.48 0.00 0.00 2.94
125 126 6.321821 TGTTAACCTATTACTTGCCATCCT 57.678 37.500 2.48 0.00 0.00 3.24
126 127 6.016276 CCATGTTAACCTATTACTTGCCATCC 60.016 42.308 2.48 0.00 0.00 3.51
127 128 6.546034 ACCATGTTAACCTATTACTTGCCATC 59.454 38.462 2.48 0.00 0.00 3.51
128 129 6.321181 CACCATGTTAACCTATTACTTGCCAT 59.679 38.462 2.48 0.00 0.00 4.40
129 130 5.650266 CACCATGTTAACCTATTACTTGCCA 59.350 40.000 2.48 0.00 0.00 4.92
130 131 5.067283 CCACCATGTTAACCTATTACTTGCC 59.933 44.000 2.48 0.00 0.00 4.52
131 132 5.449999 GCCACCATGTTAACCTATTACTTGC 60.450 44.000 2.48 0.00 0.00 4.01
132 133 5.650266 TGCCACCATGTTAACCTATTACTTG 59.350 40.000 2.48 0.00 0.00 3.16
133 134 5.822204 TGCCACCATGTTAACCTATTACTT 58.178 37.500 2.48 0.00 0.00 2.24
134 135 5.045140 ACTGCCACCATGTTAACCTATTACT 60.045 40.000 2.48 0.00 0.00 2.24
135 136 5.190677 ACTGCCACCATGTTAACCTATTAC 58.809 41.667 2.48 0.00 0.00 1.89
136 137 5.444744 ACTGCCACCATGTTAACCTATTA 57.555 39.130 2.48 0.00 0.00 0.98
137 138 4.316025 ACTGCCACCATGTTAACCTATT 57.684 40.909 2.48 0.00 0.00 1.73
138 139 4.316025 AACTGCCACCATGTTAACCTAT 57.684 40.909 2.48 0.00 0.00 2.57
139 140 3.799432 AACTGCCACCATGTTAACCTA 57.201 42.857 2.48 0.00 0.00 3.08
140 141 2.675658 AACTGCCACCATGTTAACCT 57.324 45.000 2.48 0.00 0.00 3.50
141 142 4.168922 GTTAACTGCCACCATGTTAACC 57.831 45.455 13.68 0.00 44.62 2.85
143 144 4.645136 TGTTGTTAACTGCCACCATGTTAA 59.355 37.500 7.22 0.00 34.89 2.01
144 145 4.207955 TGTTGTTAACTGCCACCATGTTA 58.792 39.130 7.22 0.00 0.00 2.41
145 146 3.027412 TGTTGTTAACTGCCACCATGTT 58.973 40.909 7.22 0.00 0.00 2.71
146 147 2.660572 TGTTGTTAACTGCCACCATGT 58.339 42.857 7.22 0.00 0.00 3.21
147 148 3.380142 GTTGTTGTTAACTGCCACCATG 58.620 45.455 7.22 0.00 0.00 3.66
148 149 2.034053 CGTTGTTGTTAACTGCCACCAT 59.966 45.455 7.22 0.00 0.00 3.55
149 150 1.402259 CGTTGTTGTTAACTGCCACCA 59.598 47.619 7.22 0.00 0.00 4.17
150 151 1.671845 TCGTTGTTGTTAACTGCCACC 59.328 47.619 7.22 0.00 0.00 4.61
151 152 3.619233 ATCGTTGTTGTTAACTGCCAC 57.381 42.857 7.22 1.38 0.00 5.01
152 153 3.749088 CCTATCGTTGTTGTTAACTGCCA 59.251 43.478 7.22 0.00 0.00 4.92
153 154 3.749609 ACCTATCGTTGTTGTTAACTGCC 59.250 43.478 7.22 0.00 0.00 4.85
154 155 4.449743 TCACCTATCGTTGTTGTTAACTGC 59.550 41.667 7.22 0.30 0.00 4.40
155 156 5.464057 TGTCACCTATCGTTGTTGTTAACTG 59.536 40.000 7.22 0.00 0.00 3.16
156 157 5.603596 TGTCACCTATCGTTGTTGTTAACT 58.396 37.500 7.22 0.00 0.00 2.24
157 158 5.910637 TGTCACCTATCGTTGTTGTTAAC 57.089 39.130 0.00 0.00 0.00 2.01
158 159 6.018588 CAGTTGTCACCTATCGTTGTTGTTAA 60.019 38.462 0.00 0.00 0.00 2.01
159 160 5.464057 CAGTTGTCACCTATCGTTGTTGTTA 59.536 40.000 0.00 0.00 0.00 2.41
160 161 4.272504 CAGTTGTCACCTATCGTTGTTGTT 59.727 41.667 0.00 0.00 0.00 2.83
161 162 3.807622 CAGTTGTCACCTATCGTTGTTGT 59.192 43.478 0.00 0.00 0.00 3.32
162 163 4.055360 TCAGTTGTCACCTATCGTTGTTG 58.945 43.478 0.00 0.00 0.00 3.33
163 164 4.056050 GTCAGTTGTCACCTATCGTTGTT 58.944 43.478 0.00 0.00 0.00 2.83
164 165 3.650139 GTCAGTTGTCACCTATCGTTGT 58.350 45.455 0.00 0.00 0.00 3.32
165 166 2.661675 CGTCAGTTGTCACCTATCGTTG 59.338 50.000 0.00 0.00 0.00 4.10
166 167 2.295349 ACGTCAGTTGTCACCTATCGTT 59.705 45.455 0.00 0.00 0.00 3.85
167 168 1.884579 ACGTCAGTTGTCACCTATCGT 59.115 47.619 0.00 0.00 0.00 3.73
168 169 2.631418 ACGTCAGTTGTCACCTATCG 57.369 50.000 0.00 0.00 0.00 2.92
169 170 5.094134 GTCTAACGTCAGTTGTCACCTATC 58.906 45.833 0.00 0.00 41.35 2.08
170 171 4.521639 TGTCTAACGTCAGTTGTCACCTAT 59.478 41.667 0.00 0.00 41.35 2.57
171 172 3.884693 TGTCTAACGTCAGTTGTCACCTA 59.115 43.478 0.00 0.00 41.35 3.08
172 173 2.691526 TGTCTAACGTCAGTTGTCACCT 59.308 45.455 0.00 0.00 41.35 4.00
173 174 2.793232 GTGTCTAACGTCAGTTGTCACC 59.207 50.000 0.00 0.00 41.35 4.02
174 175 2.793232 GGTGTCTAACGTCAGTTGTCAC 59.207 50.000 0.00 0.00 41.35 3.67
175 176 2.427812 TGGTGTCTAACGTCAGTTGTCA 59.572 45.455 0.00 0.00 41.35 3.58
176 177 3.050619 CTGGTGTCTAACGTCAGTTGTC 58.949 50.000 0.00 0.00 41.35 3.18
177 178 2.429610 ACTGGTGTCTAACGTCAGTTGT 59.570 45.455 0.00 0.00 41.35 3.32
178 179 2.794910 CACTGGTGTCTAACGTCAGTTG 59.205 50.000 1.43 0.00 41.35 3.16
179 180 2.429610 ACACTGGTGTCTAACGTCAGTT 59.570 45.455 0.01 0.00 40.24 3.16
180 181 2.029623 ACACTGGTGTCTAACGTCAGT 58.970 47.619 0.01 0.00 40.24 3.41
181 182 2.795175 ACACTGGTGTCTAACGTCAG 57.205 50.000 0.01 0.00 40.24 3.51
666 667 1.340017 GCCTGTCTTATCTGGTTGCCA 60.340 52.381 0.00 0.00 0.00 4.92
667 668 1.383523 GCCTGTCTTATCTGGTTGCC 58.616 55.000 0.00 0.00 0.00 4.52
668 669 1.009829 CGCCTGTCTTATCTGGTTGC 58.990 55.000 0.00 0.00 0.00 4.17
669 670 2.672961 TCGCCTGTCTTATCTGGTTG 57.327 50.000 0.00 0.00 0.00 3.77
670 671 2.158900 CCATCGCCTGTCTTATCTGGTT 60.159 50.000 0.00 0.00 0.00 3.67
671 672 1.414181 CCATCGCCTGTCTTATCTGGT 59.586 52.381 0.00 0.00 0.00 4.00
672 673 1.414181 ACCATCGCCTGTCTTATCTGG 59.586 52.381 0.00 0.00 0.00 3.86
673 674 2.477825 CACCATCGCCTGTCTTATCTG 58.522 52.381 0.00 0.00 0.00 2.90
674 675 1.414181 CCACCATCGCCTGTCTTATCT 59.586 52.381 0.00 0.00 0.00 1.98
675 676 1.139058 ACCACCATCGCCTGTCTTATC 59.861 52.381 0.00 0.00 0.00 1.75
676 677 1.204146 ACCACCATCGCCTGTCTTAT 58.796 50.000 0.00 0.00 0.00 1.73
677 678 1.754803 CTACCACCATCGCCTGTCTTA 59.245 52.381 0.00 0.00 0.00 2.10
678 679 0.537188 CTACCACCATCGCCTGTCTT 59.463 55.000 0.00 0.00 0.00 3.01
679 680 1.330655 CCTACCACCATCGCCTGTCT 61.331 60.000 0.00 0.00 0.00 3.41
680 681 1.144057 CCTACCACCATCGCCTGTC 59.856 63.158 0.00 0.00 0.00 3.51
681 682 2.367202 CCCTACCACCATCGCCTGT 61.367 63.158 0.00 0.00 0.00 4.00
682 683 2.505982 CCCTACCACCATCGCCTG 59.494 66.667 0.00 0.00 0.00 4.85
683 684 2.768344 CCCCTACCACCATCGCCT 60.768 66.667 0.00 0.00 0.00 5.52
684 685 2.604299 GAACCCCTACCACCATCGCC 62.604 65.000 0.00 0.00 0.00 5.54
685 686 1.153229 GAACCCCTACCACCATCGC 60.153 63.158 0.00 0.00 0.00 4.58
686 687 1.143183 CGAACCCCTACCACCATCG 59.857 63.158 0.00 0.00 0.00 3.84
687 688 0.464452 CTCGAACCCCTACCACCATC 59.536 60.000 0.00 0.00 0.00 3.51
688 689 0.042131 TCTCGAACCCCTACCACCAT 59.958 55.000 0.00 0.00 0.00 3.55
689 690 0.613853 CTCTCGAACCCCTACCACCA 60.614 60.000 0.00 0.00 0.00 4.17
690 691 1.328430 CCTCTCGAACCCCTACCACC 61.328 65.000 0.00 0.00 0.00 4.61
691 692 0.614134 ACCTCTCGAACCCCTACCAC 60.614 60.000 0.00 0.00 0.00 4.16
692 693 0.613853 CACCTCTCGAACCCCTACCA 60.614 60.000 0.00 0.00 0.00 3.25
693 694 1.328430 CCACCTCTCGAACCCCTACC 61.328 65.000 0.00 0.00 0.00 3.18
694 695 1.328430 CCCACCTCTCGAACCCCTAC 61.328 65.000 0.00 0.00 0.00 3.18
695 696 1.001248 CCCACCTCTCGAACCCCTA 59.999 63.158 0.00 0.00 0.00 3.53
696 697 2.284699 CCCACCTCTCGAACCCCT 60.285 66.667 0.00 0.00 0.00 4.79
697 698 2.284405 TCCCACCTCTCGAACCCC 60.284 66.667 0.00 0.00 0.00 4.95
698 699 0.903454 TTCTCCCACCTCTCGAACCC 60.903 60.000 0.00 0.00 0.00 4.11
699 700 0.533032 CTTCTCCCACCTCTCGAACC 59.467 60.000 0.00 0.00 0.00 3.62
700 701 1.546961 TCTTCTCCCACCTCTCGAAC 58.453 55.000 0.00 0.00 0.00 3.95
701 702 2.103373 CATCTTCTCCCACCTCTCGAA 58.897 52.381 0.00 0.00 0.00 3.71
702 703 1.686428 CCATCTTCTCCCACCTCTCGA 60.686 57.143 0.00 0.00 0.00 4.04
703 704 0.749649 CCATCTTCTCCCACCTCTCG 59.250 60.000 0.00 0.00 0.00 4.04
704 705 0.467804 GCCATCTTCTCCCACCTCTC 59.532 60.000 0.00 0.00 0.00 3.20
705 706 1.333636 CGCCATCTTCTCCCACCTCT 61.334 60.000 0.00 0.00 0.00 3.69
706 707 1.144936 CGCCATCTTCTCCCACCTC 59.855 63.158 0.00 0.00 0.00 3.85
707 708 2.370445 CCGCCATCTTCTCCCACCT 61.370 63.158 0.00 0.00 0.00 4.00
708 709 2.190578 CCGCCATCTTCTCCCACC 59.809 66.667 0.00 0.00 0.00 4.61
709 710 2.514824 GCCGCCATCTTCTCCCAC 60.515 66.667 0.00 0.00 0.00 4.61
710 711 3.008517 TGCCGCCATCTTCTCCCA 61.009 61.111 0.00 0.00 0.00 4.37
711 712 2.203126 CTGCCGCCATCTTCTCCC 60.203 66.667 0.00 0.00 0.00 4.30
712 713 1.522580 GACTGCCGCCATCTTCTCC 60.523 63.158 0.00 0.00 0.00 3.71
713 714 1.880340 CGACTGCCGCCATCTTCTC 60.880 63.158 0.00 0.00 0.00 2.87
714 715 2.185350 CGACTGCCGCCATCTTCT 59.815 61.111 0.00 0.00 0.00 2.85
715 716 2.892425 CCGACTGCCGCCATCTTC 60.892 66.667 0.00 0.00 36.84 2.87
716 717 4.473520 CCCGACTGCCGCCATCTT 62.474 66.667 0.00 0.00 36.84 2.40
718 719 3.757248 AATCCCGACTGCCGCCATC 62.757 63.158 0.00 0.00 36.84 3.51
719 720 3.797353 AATCCCGACTGCCGCCAT 61.797 61.111 0.00 0.00 36.84 4.40
720 721 4.776322 CAATCCCGACTGCCGCCA 62.776 66.667 0.00 0.00 36.84 5.69
723 724 4.856801 CCCCAATCCCGACTGCCG 62.857 72.222 0.00 0.00 38.18 5.69
724 725 2.682582 GATCCCCAATCCCGACTGCC 62.683 65.000 0.00 0.00 0.00 4.85
725 726 1.227973 GATCCCCAATCCCGACTGC 60.228 63.158 0.00 0.00 0.00 4.40
726 727 1.069765 CGATCCCCAATCCCGACTG 59.930 63.158 0.00 0.00 0.00 3.51
727 728 0.471971 ATCGATCCCCAATCCCGACT 60.472 55.000 0.00 0.00 31.85 4.18
728 729 0.037232 GATCGATCCCCAATCCCGAC 60.037 60.000 14.76 0.00 31.85 4.79
729 730 1.532604 CGATCGATCCCCAATCCCGA 61.533 60.000 19.51 0.00 0.00 5.14
730 731 1.079819 CGATCGATCCCCAATCCCG 60.080 63.158 19.51 1.36 0.00 5.14
731 732 1.192146 TCCGATCGATCCCCAATCCC 61.192 60.000 18.66 0.00 0.00 3.85
732 733 0.247736 CTCCGATCGATCCCCAATCC 59.752 60.000 18.66 0.00 0.00 3.01
733 734 0.247736 CCTCCGATCGATCCCCAATC 59.752 60.000 18.66 0.00 0.00 2.67
734 735 1.831652 GCCTCCGATCGATCCCCAAT 61.832 60.000 18.66 0.00 0.00 3.16
735 736 2.507854 GCCTCCGATCGATCCCCAA 61.508 63.158 18.66 2.08 0.00 4.12
736 737 2.917751 GCCTCCGATCGATCCCCA 60.918 66.667 18.66 2.84 0.00 4.96
737 738 3.696676 GGCCTCCGATCGATCCCC 61.697 72.222 18.66 7.85 0.00 4.81
754 755 2.819595 CACAATCCAGCCGTCCCG 60.820 66.667 0.00 0.00 0.00 5.14
755 756 3.134127 GCACAATCCAGCCGTCCC 61.134 66.667 0.00 0.00 0.00 4.46
756 757 3.499737 CGCACAATCCAGCCGTCC 61.500 66.667 0.00 0.00 0.00 4.79
757 758 3.499737 CCGCACAATCCAGCCGTC 61.500 66.667 0.00 0.00 0.00 4.79
760 761 2.676471 AACCCGCACAATCCAGCC 60.676 61.111 0.00 0.00 0.00 4.85
761 762 2.568090 CAACCCGCACAATCCAGC 59.432 61.111 0.00 0.00 0.00 4.85
762 763 2.568090 GCAACCCGCACAATCCAG 59.432 61.111 0.00 0.00 41.79 3.86
763 764 3.361158 CGCAACCCGCACAATCCA 61.361 61.111 0.00 0.00 42.60 3.41
764 765 4.114997 CCGCAACCCGCACAATCC 62.115 66.667 0.00 0.00 42.60 3.01
765 766 4.114997 CCCGCAACCCGCACAATC 62.115 66.667 0.00 0.00 42.60 2.67
773 774 4.410400 CAGAGGACCCCGCAACCC 62.410 72.222 0.00 0.00 0.00 4.11
774 775 4.410400 CCAGAGGACCCCGCAACC 62.410 72.222 0.00 0.00 0.00 3.77
784 785 3.083349 CATGTCCGGGCCAGAGGA 61.083 66.667 2.12 7.51 0.00 3.71
785 786 4.864334 GCATGTCCGGGCCAGAGG 62.864 72.222 2.12 4.70 0.00 3.69
796 797 3.469863 TAATCCCGCCCCGCATGTC 62.470 63.158 0.00 0.00 0.00 3.06
797 798 3.484806 TAATCCCGCCCCGCATGT 61.485 61.111 0.00 0.00 0.00 3.21
798 799 2.978010 GTAATCCCGCCCCGCATG 60.978 66.667 0.00 0.00 0.00 4.06
799 800 4.265056 GGTAATCCCGCCCCGCAT 62.265 66.667 0.00 0.00 0.00 4.73
802 803 3.788145 TGTGGTAATCCCGCCCCG 61.788 66.667 0.00 0.00 43.57 5.73
803 804 2.124445 GTGTGGTAATCCCGCCCC 60.124 66.667 0.00 0.00 43.57 5.80
804 805 1.747745 GTGTGTGGTAATCCCGCCC 60.748 63.158 0.00 0.00 43.57 6.13
805 806 1.747745 GGTGTGTGGTAATCCCGCC 60.748 63.158 0.00 0.00 43.57 6.13
806 807 2.104253 CGGTGTGTGGTAATCCCGC 61.104 63.158 0.00 0.00 44.53 6.13
807 808 1.448893 CCGGTGTGTGGTAATCCCG 60.449 63.158 0.00 0.00 35.15 5.14
808 809 0.544697 ATCCGGTGTGTGGTAATCCC 59.455 55.000 0.00 0.00 0.00 3.85
809 810 2.413310 AATCCGGTGTGTGGTAATCC 57.587 50.000 0.00 0.00 0.00 3.01
810 811 2.159435 GCAAATCCGGTGTGTGGTAATC 60.159 50.000 0.00 0.00 0.00 1.75
811 812 1.816224 GCAAATCCGGTGTGTGGTAAT 59.184 47.619 0.00 0.00 0.00 1.89
812 813 1.240256 GCAAATCCGGTGTGTGGTAA 58.760 50.000 0.00 0.00 0.00 2.85
813 814 0.951525 CGCAAATCCGGTGTGTGGTA 60.952 55.000 0.00 0.00 0.00 3.25
814 815 2.258013 CGCAAATCCGGTGTGTGGT 61.258 57.895 0.00 0.00 0.00 4.16
815 816 2.560861 CGCAAATCCGGTGTGTGG 59.439 61.111 0.00 0.00 0.00 4.17
816 817 2.560861 CCGCAAATCCGGTGTGTG 59.439 61.111 0.00 4.85 43.24 3.82
817 818 2.671619 CCCGCAAATCCGGTGTGT 60.672 61.111 0.00 0.00 46.71 3.72
818 819 2.671619 ACCCGCAAATCCGGTGTG 60.672 61.111 0.00 0.00 46.71 3.82
819 820 2.359478 GACCCGCAAATCCGGTGT 60.359 61.111 0.00 0.00 46.71 4.16
820 821 3.496131 CGACCCGCAAATCCGGTG 61.496 66.667 0.00 0.00 46.71 4.94
821 822 4.011517 ACGACCCGCAAATCCGGT 62.012 61.111 0.00 0.00 46.71 5.28
823 824 4.160635 GCACGACCCGCAAATCCG 62.161 66.667 0.00 0.00 0.00 4.18
824 825 3.810896 GGCACGACCCGCAAATCC 61.811 66.667 0.00 0.00 0.00 3.01
825 826 1.862602 AAAGGCACGACCCGCAAATC 61.863 55.000 0.00 0.00 40.58 2.17
826 827 1.901464 AAAGGCACGACCCGCAAAT 60.901 52.632 0.00 0.00 40.58 2.32
827 828 2.517402 AAAGGCACGACCCGCAAA 60.517 55.556 0.00 0.00 40.58 3.68
828 829 3.283684 CAAAGGCACGACCCGCAA 61.284 61.111 0.00 0.00 40.58 4.85
829 830 4.555709 ACAAAGGCACGACCCGCA 62.556 61.111 0.00 0.00 40.58 5.69
830 831 4.025401 CACAAAGGCACGACCCGC 62.025 66.667 0.00 0.00 40.58 6.13
831 832 4.025401 GCACAAAGGCACGACCCG 62.025 66.667 0.00 0.00 40.58 5.28
832 833 4.025401 CGCACAAAGGCACGACCC 62.025 66.667 0.00 0.00 40.58 4.46
833 834 4.683334 GCGCACAAAGGCACGACC 62.683 66.667 0.30 0.00 39.61 4.79
834 835 4.683334 GGCGCACAAAGGCACGAC 62.683 66.667 10.83 0.00 0.00 4.34
867 868 3.728373 ATGGACAGGAACCCGCCC 61.728 66.667 0.00 0.00 0.00 6.13
868 869 2.438434 CATGGACAGGAACCCGCC 60.438 66.667 0.00 0.00 0.00 6.13
869 870 3.134127 GCATGGACAGGAACCCGC 61.134 66.667 0.00 0.00 0.00 6.13
870 871 2.438434 GGCATGGACAGGAACCCG 60.438 66.667 0.00 0.00 0.00 5.28
871 872 1.678970 GTGGCATGGACAGGAACCC 60.679 63.158 0.00 0.00 0.00 4.11
872 873 1.074775 TGTGGCATGGACAGGAACC 59.925 57.895 0.00 0.00 0.00 3.62
873 874 1.577328 CGTGTGGCATGGACAGGAAC 61.577 60.000 0.00 0.00 32.16 3.62
874 875 1.302431 CGTGTGGCATGGACAGGAA 60.302 57.895 0.00 0.00 32.16 3.36
875 876 2.171209 CTCGTGTGGCATGGACAGGA 62.171 60.000 0.00 0.00 36.22 3.86
876 877 1.742880 CTCGTGTGGCATGGACAGG 60.743 63.158 0.00 0.00 0.00 4.00
877 878 1.742880 CCTCGTGTGGCATGGACAG 60.743 63.158 0.00 0.00 0.00 3.51
878 879 2.347114 CCTCGTGTGGCATGGACA 59.653 61.111 0.00 0.00 0.00 4.02
890 891 4.539083 TTGTGCCACACGCCTCGT 62.539 61.111 0.00 0.00 42.36 4.18
891 892 4.012895 GTTGTGCCACACGCCTCG 62.013 66.667 0.00 0.00 37.14 4.63
892 893 1.301401 TAGTTGTGCCACACGCCTC 60.301 57.895 0.00 0.00 37.14 4.70
893 894 1.597027 GTAGTTGTGCCACACGCCT 60.597 57.895 0.00 0.00 37.14 5.52
894 895 2.613506 GGTAGTTGTGCCACACGCC 61.614 63.158 0.00 0.00 37.14 5.68
895 896 2.613506 GGGTAGTTGTGCCACACGC 61.614 63.158 0.00 0.00 37.14 5.34
896 897 2.314647 CGGGTAGTTGTGCCACACG 61.315 63.158 0.00 0.00 37.14 4.49
897 898 0.321298 ATCGGGTAGTTGTGCCACAC 60.321 55.000 0.00 0.00 34.56 3.82
898 899 1.066716 GTATCGGGTAGTTGTGCCACA 60.067 52.381 0.00 0.00 0.00 4.17
899 900 1.066716 TGTATCGGGTAGTTGTGCCAC 60.067 52.381 0.00 0.00 0.00 5.01
900 901 1.066716 GTGTATCGGGTAGTTGTGCCA 60.067 52.381 0.00 0.00 0.00 4.92
901 902 1.648504 GTGTATCGGGTAGTTGTGCC 58.351 55.000 0.00 0.00 0.00 5.01
902 903 1.066716 TGGTGTATCGGGTAGTTGTGC 60.067 52.381 0.00 0.00 0.00 4.57
903 904 2.028839 TGTGGTGTATCGGGTAGTTGTG 60.029 50.000 0.00 0.00 0.00 3.33
904 905 2.028748 GTGTGGTGTATCGGGTAGTTGT 60.029 50.000 0.00 0.00 0.00 3.32
905 906 2.613691 GTGTGGTGTATCGGGTAGTTG 58.386 52.381 0.00 0.00 0.00 3.16
906 907 1.203052 CGTGTGGTGTATCGGGTAGTT 59.797 52.381 0.00 0.00 0.00 2.24
907 908 0.813184 CGTGTGGTGTATCGGGTAGT 59.187 55.000 0.00 0.00 0.00 2.73
908 909 0.813184 ACGTGTGGTGTATCGGGTAG 59.187 55.000 0.00 0.00 0.00 3.18
909 910 0.527113 CACGTGTGGTGTATCGGGTA 59.473 55.000 7.58 0.00 41.89 3.69
910 911 1.290955 CACGTGTGGTGTATCGGGT 59.709 57.895 7.58 0.00 41.89 5.28
911 912 4.178861 CACGTGTGGTGTATCGGG 57.821 61.111 7.58 0.00 41.89 5.14
919 920 2.750948 GATAACTGTCACACGTGTGGT 58.249 47.619 39.88 29.44 45.65 4.16
920 921 1.719246 CGATAACTGTCACACGTGTGG 59.281 52.381 39.88 28.84 45.65 4.17
921 922 1.719246 CCGATAACTGTCACACGTGTG 59.281 52.381 37.04 37.04 46.91 3.82
922 923 1.336517 CCCGATAACTGTCACACGTGT 60.337 52.381 17.22 17.22 0.00 4.49
923 924 1.068125 TCCCGATAACTGTCACACGTG 60.068 52.381 15.48 15.48 0.00 4.49
924 925 1.068055 GTCCCGATAACTGTCACACGT 60.068 52.381 0.00 0.00 0.00 4.49
925 926 1.625616 GTCCCGATAACTGTCACACG 58.374 55.000 0.00 0.00 0.00 4.49
926 927 1.405121 GGGTCCCGATAACTGTCACAC 60.405 57.143 0.00 0.00 0.00 3.82
927 928 0.899720 GGGTCCCGATAACTGTCACA 59.100 55.000 0.00 0.00 0.00 3.58
928 929 0.177373 GGGGTCCCGATAACTGTCAC 59.823 60.000 0.48 0.00 0.00 3.67
929 930 2.599216 GGGGTCCCGATAACTGTCA 58.401 57.895 0.48 0.00 0.00 3.58
941 942 4.355720 GGGGGAAACACGGGGTCC 62.356 72.222 1.05 1.05 0.00 4.46
942 943 3.572222 TGGGGGAAACACGGGGTC 61.572 66.667 0.00 0.00 0.00 4.46
943 944 3.893399 GTGGGGGAAACACGGGGT 61.893 66.667 0.00 0.00 0.00 4.95
944 945 3.562732 GAGTGGGGGAAACACGGGG 62.563 68.421 0.00 0.00 43.41 5.73
945 946 2.033602 GAGTGGGGGAAACACGGG 59.966 66.667 0.00 0.00 43.41 5.28
946 947 2.358247 CGAGTGGGGGAAACACGG 60.358 66.667 0.00 0.00 43.41 4.94
947 948 3.047877 GCGAGTGGGGGAAACACG 61.048 66.667 0.00 0.00 43.41 4.49
948 949 3.047877 CGCGAGTGGGGGAAACAC 61.048 66.667 0.00 0.00 39.10 3.32
949 950 3.552384 ACGCGAGTGGGGGAAACA 61.552 61.111 15.93 0.00 46.97 2.83
957 958 4.978485 GAGACGTTTCTTTACGCGAGTGG 61.978 52.174 15.93 0.00 45.06 4.00
958 959 2.088664 GAGACGTTTCTTTACGCGAGTG 59.911 50.000 15.93 0.00 45.06 3.51
959 960 2.314122 GAGACGTTTCTTTACGCGAGT 58.686 47.619 15.93 0.00 45.06 4.18
960 961 1.647702 GGAGACGTTTCTTTACGCGAG 59.352 52.381 15.93 0.00 45.06 5.03
961 962 1.689959 GGAGACGTTTCTTTACGCGA 58.310 50.000 15.93 0.00 45.06 5.87
975 976 2.665172 GATCGAGGAACCGCGGAGAC 62.665 65.000 35.90 20.44 39.59 3.36
985 986 1.889170 CTCCATGGATCGATCGAGGAA 59.111 52.381 23.84 11.12 0.00 3.36
1049 1050 3.512516 GGTCGCAGATGGCCAAGC 61.513 66.667 10.96 14.13 40.67 4.01
1051 1052 4.424711 GGGGTCGCAGATGGCCAA 62.425 66.667 10.96 0.00 40.67 4.52
1102 1103 2.283604 TACCTGCTGTCCGAGGCA 60.284 61.111 0.00 0.00 36.94 4.75
1306 2015 3.528905 TGAAATCCTGATTGGGATGGAGT 59.471 43.478 0.00 0.00 44.50 3.85
1352 2090 4.584743 GGTTGGTTTCAGGAACAAGAGATT 59.415 41.667 0.00 0.00 40.13 2.40
1462 2204 2.670414 GACAAAGTCGAGGATGCTGAAG 59.330 50.000 0.00 0.00 0.00 3.02
1536 2278 1.313091 TGTCAGGGTGGATCGTCTCG 61.313 60.000 0.00 0.00 0.00 4.04
1537 2279 0.895530 TTGTCAGGGTGGATCGTCTC 59.104 55.000 0.00 0.00 0.00 3.36
1538 2280 0.898320 CTTGTCAGGGTGGATCGTCT 59.102 55.000 0.00 0.00 0.00 4.18
1539 2281 0.108138 CCTTGTCAGGGTGGATCGTC 60.108 60.000 0.00 0.00 36.36 4.20
1540 2282 1.983224 CCTTGTCAGGGTGGATCGT 59.017 57.895 0.00 0.00 36.36 3.73
1730 2475 2.028658 TCACAGAAAGCAGCCACTAGAG 60.029 50.000 0.00 0.00 0.00 2.43
1735 2484 0.590195 CAGTCACAGAAAGCAGCCAC 59.410 55.000 0.00 0.00 0.00 5.01
1771 2520 5.869350 ACGTTGCTTATTTTCATAGCTCAC 58.131 37.500 0.00 0.00 0.00 3.51
1836 2589 3.127548 CCGAAACAAGTCTATTGCATGCT 59.872 43.478 20.33 1.26 0.00 3.79
1856 2638 2.990941 ACGTACGTATATGCAGAACCG 58.009 47.619 21.41 0.00 0.00 4.44
1869 2651 7.330208 AGCTTCATTATCTTTTGTTACGTACGT 59.670 33.333 25.98 25.98 0.00 3.57
1870 2652 7.672738 AGCTTCATTATCTTTTGTTACGTACG 58.327 34.615 15.01 15.01 0.00 3.67
1872 2654 9.865321 ACTAGCTTCATTATCTTTTGTTACGTA 57.135 29.630 0.00 0.00 0.00 3.57
1911 2693 8.591940 TCCAGATCATCCTATTTCTAGTTGATG 58.408 37.037 0.00 0.00 31.30 3.07
2043 2825 0.806868 TGCTCAGTTAATGCTGCTGC 59.193 50.000 8.89 8.89 36.49 5.25
2065 2847 1.300697 GGTTGTGCGTTCTCTCCGT 60.301 57.895 0.00 0.00 0.00 4.69
2185 2967 1.076549 ACGGGATGTGCAAATGGGT 59.923 52.632 0.00 0.00 0.00 4.51
2342 3124 2.559231 GGGTACGCCTCCATTTCAAAAA 59.441 45.455 0.00 0.00 34.45 1.94
2343 3125 2.164338 GGGTACGCCTCCATTTCAAAA 58.836 47.619 0.00 0.00 34.45 2.44
2344 3126 1.614850 GGGGTACGCCTCCATTTCAAA 60.615 52.381 21.18 0.00 34.11 2.69
2345 3127 0.034863 GGGGTACGCCTCCATTTCAA 60.035 55.000 21.18 0.00 34.11 2.69
2346 3128 1.605453 GGGGTACGCCTCCATTTCA 59.395 57.895 21.18 0.00 34.11 2.69
2347 3129 4.553668 GGGGTACGCCTCCATTTC 57.446 61.111 21.18 0.00 34.11 2.17
2359 3141 4.815973 ATGCAGAGGCCGGGGGTA 62.816 66.667 2.18 0.00 40.13 3.69
2362 3144 3.882326 ATGATGCAGAGGCCGGGG 61.882 66.667 2.18 0.00 40.13 5.73
2363 3145 2.407440 ATCATGATGCAGAGGCCGGG 62.407 60.000 7.59 0.00 40.13 5.73
2364 3146 1.072678 ATCATGATGCAGAGGCCGG 59.927 57.895 7.59 0.00 40.13 6.13
2365 3147 0.250166 TCATCATGATGCAGAGGCCG 60.250 55.000 27.68 4.34 40.13 6.13
2366 3148 1.813178 CATCATCATGATGCAGAGGCC 59.187 52.381 27.68 0.00 46.37 5.19
2375 3157 0.526211 GCCGCATGCATCATCATGAT 59.474 50.000 19.57 1.18 44.94 2.45
2376 3158 1.520600 GGCCGCATGCATCATCATGA 61.521 55.000 19.57 0.00 44.94 3.07
2377 3159 1.080772 GGCCGCATGCATCATCATG 60.081 57.895 19.57 0.00 44.93 3.07
2378 3160 0.898326 ATGGCCGCATGCATCATCAT 60.898 50.000 19.57 10.37 43.89 2.45
2379 3161 1.520600 GATGGCCGCATGCATCATCA 61.521 55.000 26.33 15.35 43.89 3.07
2380 3162 1.211969 GATGGCCGCATGCATCATC 59.788 57.895 19.57 20.53 43.89 2.92
2381 3163 0.826256 AAGATGGCCGCATGCATCAT 60.826 50.000 19.57 16.63 43.89 2.45
2382 3164 0.179023 TAAGATGGCCGCATGCATCA 60.179 50.000 19.57 12.47 43.89 3.07
2383 3165 1.171308 ATAAGATGGCCGCATGCATC 58.829 50.000 19.57 12.80 43.89 3.91
2384 3166 1.624336 AATAAGATGGCCGCATGCAT 58.376 45.000 19.57 2.77 43.89 3.96
2385 3167 2.268762 TAATAAGATGGCCGCATGCA 57.731 45.000 19.57 0.00 43.89 3.96
2386 3168 2.293122 TGTTAATAAGATGGCCGCATGC 59.707 45.455 7.91 7.91 40.16 4.06
2387 3169 4.566545 TTGTTAATAAGATGGCCGCATG 57.433 40.909 0.00 0.00 0.00 4.06
2388 3170 4.218417 GGATTGTTAATAAGATGGCCGCAT 59.782 41.667 0.00 0.00 0.00 4.73
2389 3171 3.568007 GGATTGTTAATAAGATGGCCGCA 59.432 43.478 0.00 0.00 0.00 5.69
2390 3172 3.568007 TGGATTGTTAATAAGATGGCCGC 59.432 43.478 0.00 0.00 0.00 6.53
2391 3173 5.063204 TCTGGATTGTTAATAAGATGGCCG 58.937 41.667 0.00 0.00 0.00 6.13
2392 3174 6.959639 TTCTGGATTGTTAATAAGATGGCC 57.040 37.500 0.00 0.00 0.00 5.36
2393 3175 7.041098 ACGATTCTGGATTGTTAATAAGATGGC 60.041 37.037 0.00 0.00 0.00 4.40
2394 3176 8.383318 ACGATTCTGGATTGTTAATAAGATGG 57.617 34.615 0.00 0.00 0.00 3.51
2402 3184 8.609176 GCTGTAATAACGATTCTGGATTGTTAA 58.391 33.333 11.84 0.00 44.12 2.01
2403 3185 7.985184 AGCTGTAATAACGATTCTGGATTGTTA 59.015 33.333 10.51 10.51 44.70 2.41
2404 3186 6.823689 AGCTGTAATAACGATTCTGGATTGTT 59.176 34.615 6.77 6.77 43.35 2.83
2405 3187 6.349300 AGCTGTAATAACGATTCTGGATTGT 58.651 36.000 0.00 0.00 33.60 2.71
2406 3188 6.851222 AGCTGTAATAACGATTCTGGATTG 57.149 37.500 0.00 0.00 0.00 2.67
2407 3189 7.275920 AGAAGCTGTAATAACGATTCTGGATT 58.724 34.615 0.00 0.00 35.29 3.01
2408 3190 6.821388 AGAAGCTGTAATAACGATTCTGGAT 58.179 36.000 0.00 0.00 35.29 3.41
2409 3191 6.222038 AGAAGCTGTAATAACGATTCTGGA 57.778 37.500 0.00 0.00 35.29 3.86
2410 3192 6.910536 AAGAAGCTGTAATAACGATTCTGG 57.089 37.500 0.00 0.00 36.09 3.86
2411 3193 7.707035 AGGTAAGAAGCTGTAATAACGATTCTG 59.293 37.037 0.00 0.00 36.09 3.02
2412 3194 7.707035 CAGGTAAGAAGCTGTAATAACGATTCT 59.293 37.037 0.00 0.00 44.52 2.40
2413 3195 7.842484 CAGGTAAGAAGCTGTAATAACGATTC 58.158 38.462 0.00 0.00 44.52 2.52
2414 3196 7.772332 CAGGTAAGAAGCTGTAATAACGATT 57.228 36.000 0.00 0.00 44.52 3.34
2427 3209 4.637977 AGAAATTAGCTGCAGGTAAGAAGC 59.362 41.667 34.04 24.45 40.71 3.86
2428 3210 5.877012 TCAGAAATTAGCTGCAGGTAAGAAG 59.123 40.000 34.04 23.54 40.71 2.85
2429 3211 5.643777 GTCAGAAATTAGCTGCAGGTAAGAA 59.356 40.000 34.04 20.28 40.71 2.52
2430 3212 5.178797 GTCAGAAATTAGCTGCAGGTAAGA 58.821 41.667 34.04 24.97 40.71 2.10
2431 3213 4.333926 GGTCAGAAATTAGCTGCAGGTAAG 59.666 45.833 34.04 23.47 40.71 2.34
2432 3214 4.261801 GGTCAGAAATTAGCTGCAGGTAA 58.738 43.478 33.53 33.53 41.48 2.85
2433 3215 3.263170 TGGTCAGAAATTAGCTGCAGGTA 59.737 43.478 21.35 21.35 33.45 3.08
2542 3324 5.355071 TCATTTATCAGTCGCTGCAAAGATT 59.645 36.000 0.00 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.