AutoCloner

Multiple sequence alignment - TraesCS2B01G249700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2B01G249700	chr2B	100.000	9212	0	0	1	9212	258635279	258644490	0.000000e+00	17012.0
1	TraesCS2B01G249700	chr2B	93.333	255	13	4	8961	9212	269363813	269364066	3.140000e-99	374.0
2	TraesCS2B01G249700	chr2B	91.329	173	13	1	4484	4656	676592160	676592330	1.550000e-57	235.0
3	TraesCS2B01G249700	chr2B	90.000	100	3	6	8468	8563	402387383	402387287	1.260000e-23	122.0
4	TraesCS2B01G249700	chr2B	97.059	68	2	0	6091	6158	258641304	258641371	2.100000e-21	115.0
5	TraesCS2B01G249700	chr2B	97.059	68	2	0	6026	6093	258641369	258641436	2.100000e-21	115.0
6	TraesCS2B01G249700	chr2D	95.768	3828	119	27	4655	8463	204494030	204497833	0.000000e+00	6131.0
7	TraesCS2B01G249700	chr2D	96.011	3309	97	12	21	3316	204489697	204492983	0.000000e+00	5347.0
8	TraesCS2B01G249700	chr2D	94.295	964	35	9	3549	4492	204493067	204494030	0.000000e+00	1458.0
9	TraesCS2B01G249700	chr2D	90.726	248	23	0	8578	8825	155616780	155616533	1.920000e-86	331.0
10	TraesCS2B01G249700	chr2D	94.798	173	9	0	8291	8463	204498209	204498381	4.240000e-68	270.0
11	TraesCS2B01G249700	chr2D	93.373	166	11	0	4491	4656	47658288	47658453	7.140000e-61	246.0
12	TraesCS2B01G249700	chr2D	91.011	178	16	0	4489	4666	426427968	426427791	3.320000e-59	241.0
13	TraesCS2B01G249700	chr2D	91.837	147	4	3	8823	8961	204498417	204498563	2.030000e-46	198.0
14	TraesCS2B01G249700	chr2D	89.796	147	7	3	8823	8961	204497869	204498015	2.040000e-41	182.0
15	TraesCS2B01G249700	chr2D	95.349	86	4	0	6091	6176	204495413	204495498	4.490000e-28	137.0
16	TraesCS2B01G249700	chr2D	94.318	88	1	4	8468	8553	523143385	523143300	2.090000e-26	132.0
17	TraesCS2B01G249700	chr2D	86.239	109	13	2	3669	3775	110570370	110570262	5.840000e-22	117.0
18	TraesCS2B01G249700	chr2D	90.909	88	6	1	4300	4387	483837694	483837779	5.840000e-22	117.0
19	TraesCS2B01G249700	chr2D	90.698	86	5	1	4305	4387	165008078	165007993	2.720000e-20	111.0
20	TraesCS2B01G249700	chr2D	92.105	76	5	1	3701	3776	500963785	500963711	1.270000e-18	106.0
21	TraesCS2B01G249700	chr2D	94.828	58	2	1	3313	3370	204493015	204493071	1.270000e-13	89.8
22	TraesCS2B01G249700	chr2A	97.043	3517	84	11	986	4489	278922754	278919245	0.000000e+00	5901.0
23	TraesCS2B01G249700	chr2A	96.766	2443	49	19	6026	8463	278917798	278915381	0.000000e+00	4047.0
24	TraesCS2B01G249700	chr2A	96.599	1529	43	6	4655	6176	278919239	278917713	0.000000e+00	2527.0
25	TraesCS2B01G249700	chr2A	91.129	248	20	2	8587	8833	454913962	454913716	1.480000e-87	335.0
26	TraesCS2B01G249700	chr2A	91.736	242	18	2	8584	8824	617761233	617761473	1.480000e-87	335.0
27	TraesCS2B01G249700	chr2A	90.438	251	24	0	8581	8831	490609779	490610029	1.920000e-86	331.0
28	TraesCS2B01G249700	chr2A	92.308	130	9	1	4020	4148	141506342	141506471	5.680000e-42	183.0
29	TraesCS2B01G249700	chr2A	95.098	102	3	1	8825	8924	278914757	278914656	9.570000e-35	159.0
30	TraesCS2B01G249700	chr2A	93.878	98	4	1	8825	8920	278915345	278915248	7.450000e-31	147.0
31	TraesCS2B01G249700	chr2A	92.157	102	6	1	8825	8924	278914511	278914410	9.640000e-30	143.0
32	TraesCS2B01G249700	chr2A	92.157	102	6	1	8825	8924	278915098	278914997	9.640000e-30	143.0
33	TraesCS2B01G249700	chr2A	94.253	87	3	2	8468	8553	127212235	127212320	2.090000e-26	132.0
34	TraesCS2B01G249700	chr2A	97.059	68	2	0	6091	6158	278917863	278917796	2.100000e-21	115.0
35	TraesCS2B01G249700	chr3A	87.343	1596	193	8	6620	8212	488995082	488996671	0.000000e+00	1820.0
36	TraesCS2B01G249700	chr3A	87.636	461	49	5	542	996	432398493	432398035	6.330000e-146	529.0
37	TraesCS2B01G249700	chr3A	93.676	253	13	3	8962	9212	208727800	208728051	8.730000e-100	375.0
38	TraesCS2B01G249700	chr3A	87.008	254	32	1	5663	5916	488994617	488994869	1.510000e-72	285.0
39	TraesCS2B01G249700	chr3A	87.783	221	27	0	4797	5017	488994206	488994426	9.180000e-65	259.0
40	TraesCS2B01G249700	chr3A	89.933	149	15	0	6377	6525	488994926	488995074	9.440000e-45	193.0
41	TraesCS2B01G249700	chr3D	86.962	1603	199	8	6615	8212	366800434	366802031	0.000000e+00	1794.0
42	TraesCS2B01G249700	chr3D	86.551	461	52	6	542	996	200434272	200433816	4.970000e-137	499.0
43	TraesCS2B01G249700	chr3D	88.293	410	35	7	593	995	404978734	404979137	6.470000e-131	479.0
44	TraesCS2B01G249700	chr3D	85.830	247	28	5	754	995	522946656	522946412	1.190000e-63	255.0
45	TraesCS2B01G249700	chr3D	86.425	221	30	0	4797	5017	366799560	366799780	9.240000e-60	243.0
46	TraesCS2B01G249700	chr3D	89.933	149	15	0	6377	6525	366800283	366800431	9.440000e-45	193.0
47	TraesCS2B01G249700	chr3D	85.714	154	19	2	3622	3775	400959641	400959791	9.570000e-35	159.0
48	TraesCS2B01G249700	chr3B	87.686	1478	181	1	6615	8092	478013199	478014675	0.000000e+00	1720.0
49	TraesCS2B01G249700	chr3B	88.720	461	44	5	542	996	754225213	754225671	2.910000e-154	556.0
50	TraesCS2B01G249700	chr3B	88.069	461	47	5	542	996	754283865	754283407	2.930000e-149	540.0
51	TraesCS2B01G249700	chr3B	85.490	255	35	2	5663	5916	478012735	478012988	1.970000e-66	265.0
52	TraesCS2B01G249700	chr3B	86.878	221	29	0	4797	5017	478012324	478012544	1.990000e-61	248.0
53	TraesCS2B01G249700	chr3B	89.820	167	12	4	369	534	744018529	744018367	9.370000e-50	209.0
54	TraesCS2B01G249700	chr3B	90.604	149	14	0	6377	6525	478013048	478013196	2.030000e-46	198.0
55	TraesCS2B01G249700	chr3B	87.097	155	17	2	3622	3776	21980058	21979907	1.230000e-38	172.0
56	TraesCS2B01G249700	chr7D	93.964	613	26	6	391	996	138178698	138178090	0.000000e+00	917.0
57	TraesCS2B01G249700	chr7D	87.852	461	47	5	542	996	1190637	1190180	4.900000e-147	532.0
58	TraesCS2B01G249700	chr7D	91.822	269	13	3	131	399	138186029	138185770	5.260000e-97	366.0
59	TraesCS2B01G249700	chr7D	91.129	124	9	2	4026	4147	454079200	454079077	5.720000e-37	167.0
60	TraesCS2B01G249700	chr7D	94.737	76	4	0	473	548	413726603	413726678	1.620000e-22	119.0
61	TraesCS2B01G249700	chr7D	85.057	87	11	2	4300	4386	1045356	1045272	4.580000e-13	87.9
62	TraesCS2B01G249700	chr7D	86.667	75	1	3	355	420	413726531	413726605	3.570000e-09	75.0
63	TraesCS2B01G249700	chr7D	95.556	45	2	0	4345	4389	448931277	448931233	1.280000e-08	73.1
64	TraesCS2B01G249700	chr6A	88.937	461	44	4	542	996	141369521	141369980	6.250000e-156	562.0
65	TraesCS2B01G249700	chr6A	87.419	461	48	7	542	996	50185095	50185551	1.060000e-143	521.0
66	TraesCS2B01G249700	chr6A	86.609	463	53	6	540	996	206360039	206359580	3.840000e-138	503.0
67	TraesCS2B01G249700	chr6A	93.077	130	8	1	4020	4148	411770381	411770252	1.220000e-43	189.0
68	TraesCS2B01G249700	chr6A	90.625	128	10	2	4025	4151	484566729	484566603	1.590000e-37	169.0
69	TraesCS2B01G249700	chr7B	88.720	461	45	5	542	996	602073607	602074066	2.910000e-154	556.0
70	TraesCS2B01G249700	chr7B	94.071	253	13	2	8961	9212	443317572	443317823	5.220000e-102	383.0
71	TraesCS2B01G249700	chr7B	91.713	181	14	1	4480	4659	281384492	281384672	5.520000e-62	250.0
72	TraesCS2B01G249700	chr7B	91.473	129	10	1	4020	4147	44939682	44939554	9.510000e-40	176.0
73	TraesCS2B01G249700	chr7B	91.398	93	6	2	8468	8558	747110259	747110351	9.710000e-25	126.0
74	TraesCS2B01G249700	chr7A	88.503	461	44	6	542	996	167990831	167991288	4.860000e-152	549.0
75	TraesCS2B01G249700	chr7A	87.852	461	48	5	542	996	668711502	668711960	1.360000e-147	534.0
76	TraesCS2B01G249700	chr7A	91.736	242	18	2	8587	8827	5188776	5188536	1.480000e-87	335.0
77	TraesCS2B01G249700	chr7A	89.630	135	13	1	4024	4157	20051667	20051533	4.420000e-38	171.0
78	TraesCS2B01G249700	chr7A	93.478	92	1	5	8465	8553	86235169	86235258	2.090000e-26	132.0
79	TraesCS2B01G249700	chr7A	88.462	104	7	5	8452	8552	38944289	38944390	4.520000e-23	121.0
80	TraesCS2B01G249700	chr7A	89.773	88	9	0	4299	4386	720615382	720615295	7.560000e-21	113.0
81	TraesCS2B01G249700	chr7A	85.859	99	11	3	3669	3764	412375219	412375317	1.640000e-17	102.0
82	TraesCS2B01G249700	chr5D	88.503	461	44	6	542	996	558017502	558017045	4.860000e-152	549.0
83	TraesCS2B01G249700	chr5D	86.304	460	52	8	544	996	449057093	449057548	2.990000e-134	490.0
84	TraesCS2B01G249700	chr5D	93.307	254	13	4	8962	9212	542975775	542976027	1.130000e-98	372.0
85	TraesCS2B01G249700	chr5D	87.629	291	27	6	711	996	365153668	365153954	6.900000e-86	329.0
86	TraesCS2B01G249700	chr5D	93.143	175	8	3	4482	4656	35164267	35164437	4.270000e-63	254.0
87	TraesCS2B01G249700	chr5D	90.769	130	9	2	4020	4148	528717404	528717277	4.420000e-38	171.0
88	TraesCS2B01G249700	chr1A	88.069	461	46	7	542	996	575506175	575505718	1.050000e-148	538.0
89	TraesCS2B01G249700	chr1A	93.548	124	7	1	4027	4149	240310251	240310128	5.680000e-42	183.0
90	TraesCS2B01G249700	chr1A	90.000	130	11	2	4020	4147	155857835	155857706	5.720000e-37	167.0
91	TraesCS2B01G249700	chr1A	86.364	154	18	2	3622	3775	340627312	340627162	2.060000e-36	165.0
92	TraesCS2B01G249700	chr1A	94.253	87	3	2	8468	8553	531709598	531709513	2.090000e-26	132.0
93	TraesCS2B01G249700	chr1A	93.182	88	6	0	4300	4387	544466923	544467010	7.510000e-26	130.0
94	TraesCS2B01G249700	chr1A	94.737	76	4	0	473	548	439988612	439988537	1.620000e-22	119.0
95	TraesCS2B01G249700	chr1A	92.105	76	6	0	473	548	375481993	375481918	3.520000e-19	108.0
96	TraesCS2B01G249700	chr1A	84.444	90	14	0	4300	4389	544467009	544466920	1.270000e-13	89.8
97	TraesCS2B01G249700	chr1A	84.932	73	3	2	356	420	375482063	375481991	5.970000e-07	67.6
98	TraesCS2B01G249700	chr1B	93.676	253	14	2	8962	9212	401608337	401608589	2.430000e-100	377.0
99	TraesCS2B01G249700	chr1B	94.737	76	4	0	473	548	262578284	262578359	1.620000e-22	119.0
100	TraesCS2B01G249700	chr1B	90.789	76	7	0	473	548	532493140	532493215	1.640000e-17	102.0
101	TraesCS2B01G249700	chr5B	93.651	252	15	1	8962	9212	661319636	661319887	8.730000e-100	375.0
102	TraesCS2B01G249700	chr5B	92.664	259	16	3	8957	9212	266353086	266353344	4.060000e-98	370.0
103	TraesCS2B01G249700	chr5B	94.737	76	4	0	473	548	598017808	598017883	1.620000e-22	119.0
104	TraesCS2B01G249700	chr4A	93.050	259	15	3	8957	9212	646540100	646540358	8.730000e-100	375.0
105	TraesCS2B01G249700	chr4A	91.908	173	12	2	4494	4665	620939880	620940051	3.320000e-59	241.0
106	TraesCS2B01G249700	chr4A	93.252	163	11	0	4494	4656	665604284	665604122	3.320000e-59	241.0
107	TraesCS2B01G249700	chr4A	93.333	90	4	1	4300	4389	488252253	488252340	2.090000e-26	132.0
108	TraesCS2B01G249700	chr4A	96.053	76	3	0	473	548	640907787	640907862	3.490000e-24	124.0
109	TraesCS2B01G249700	chr4A	91.954	87	5	1	4300	4386	472961259	472961343	4.520000e-23	121.0
110	TraesCS2B01G249700	chr4A	94.737	76	4	0	473	548	578942447	578942372	1.620000e-22	119.0
111	TraesCS2B01G249700	chr4A	85.859	99	11	3	3669	3764	197939611	197939513	1.640000e-17	102.0
112	TraesCS2B01G249700	chrUn	92.664	259	16	3	8957	9212	284255422	284255680	4.060000e-98	370.0
113	TraesCS2B01G249700	chrUn	86.321	212	15	7	326	534	290359308	290359508	1.560000e-52	219.0
114	TraesCS2B01G249700	chrUn	89.928	139	13	1	4020	4157	50619863	50620001	2.640000e-40	178.0
115	TraesCS2B01G249700	chrUn	89.147	129	13	1	4020	4147	96471054	96471182	9.570000e-35	159.0
116	TraesCS2B01G249700	chrUn	100.000	28	0	0	4120	4147	84534934	84534907	1.700000e-02	52.8
117	TraesCS2B01G249700	chrUn	100.000	28	0	0	4120	4147	90452981	90452954	1.700000e-02	52.8
118	TraesCS2B01G249700	chrUn	100.000	28	0	0	4120	4147	154087996	154087969	1.700000e-02	52.8
119	TraesCS2B01G249700	chr4B	92.975	242	16	1	8587	8827	138301352	138301111	1.470000e-92	351.0
120	TraesCS2B01G249700	chr4B	91.129	248	17	3	8578	8824	551694713	551694956	1.920000e-86	331.0
121	TraesCS2B01G249700	chr4B	93.413	167	11	0	4490	4656	429242086	429241920	1.990000e-61	248.0
122	TraesCS2B01G249700	chr4B	91.045	134	11	1	4020	4152	106227537	106227404	7.350000e-41	180.0
123	TraesCS2B01G249700	chr4B	90.698	129	11	1	4020	4147	146469344	146469216	4.420000e-38	171.0
124	TraesCS2B01G249700	chr4B	90.625	128	10	2	4024	4150	510827688	510827814	1.590000e-37	169.0
125	TraesCS2B01G249700	chr4B	93.333	90	3	3	4300	4389	132053328	132053242	7.510000e-26	130.0
126	TraesCS2B01G249700	chr5A	92.437	238	18	0	8588	8825	419259695	419259458	3.190000e-89	340.0
127	TraesCS2B01G249700	chr5A	91.129	248	21	1	8579	8825	528023555	528023802	1.480000e-87	335.0
128	TraesCS2B01G249700	chr5A	90.769	130	9	2	4020	4148	656872411	656872284	4.420000e-38	171.0
129	TraesCS2B01G249700	chr5A	96.591	88	1	1	4299	4386	370102433	370102518	2.680000e-30	145.0
130	TraesCS2B01G249700	chr5A	91.765	85	5	1	4305	4387	505187096	505187180	5.840000e-22	117.0
131	TraesCS2B01G249700	chr5A	93.421	76	5	0	473	548	486499078	486499153	7.560000e-21	113.0
132	TraesCS2B01G249700	chr4D	89.674	184	15	4	4474	4656	98667861	98668041	2.000000e-56	231.0
133	TraesCS2B01G249700	chr4D	89.552	134	11	3	4020	4150	74079480	74079347	5.720000e-37	167.0
134	TraesCS2B01G249700	chr4D	85.621	153	17	2	4003	4150	428587943	428587791	1.240000e-33	156.0
135	TraesCS2B01G249700	chr4D	92.222	90	5	2	4300	4389	93609461	93609374	9.710000e-25	126.0
136	TraesCS2B01G249700	chr4D	83.544	79	10	1	4300	4375	10277642	10277720	4.610000e-08	71.3
137	TraesCS2B01G249700	chr1D	87.742	155	16	2	3622	3776	56803455	56803304	2.640000e-40	178.0
138	TraesCS2B01G249700	chr1D	92.000	125	8	2	4027	4149	193504505	193504381	3.420000e-39	174.0
139	TraesCS2B01G249700	chr1D	90.076	131	12	1	4020	4149	156133364	156133494	1.590000e-37	169.0
140	TraesCS2B01G249700	chr1D	89.600	125	12	1	4025	4148	246650104	246649980	3.440000e-34	158.0
141	TraesCS2B01G249700	chr1D	88.148	135	11	5	4020	4150	314013560	314013693	1.240000e-33	156.0
142	TraesCS2B01G249700	chr1D	83.636	165	21	3	835	996	374375452	374375613	5.760000e-32	150.0
143	TraesCS2B01G249700	chr1D	94.318	88	3	2	4300	4387	449276308	449276393	5.800000e-27	134.0
144	TraesCS2B01G249700	chr1D	94.186	86	3	2	8468	8552	348120776	348120860	7.510000e-26	130.0
145	TraesCS2B01G249700	chr1D	92.391	92	1	6	8468	8557	465077611	465077524	9.710000e-25	126.0
146	TraesCS2B01G249700	chr1D	86.667	105	12	2	3669	3771	352080166	352080062	2.100000e-21	115.0
147	TraesCS2B01G249700	chr6D	88.235	136	14	2	4020	4154	256728578	256728444	2.660000e-35	161.0
148	TraesCS2B01G249700	chr6D	88.235	136	14	2	4020	4154	256729375	256729241	2.660000e-35	161.0
149	TraesCS2B01G249700	chr6D	89.147	129	12	2	4020	4147	320698207	320698080	9.570000e-35	159.0
150	TraesCS2B01G249700	chr6D	88.189	127	13	2	4025	4149	381997508	381997382	5.760000e-32	150.0
151	TraesCS2B01G249700	chr6D	88.095	126	13	2	4028	4151	65644091	65644216	2.070000e-31	148.0
152	TraesCS2B01G249700	chr6D	86.667	135	13	5	4020	4150	418157530	418157663	2.680000e-30	145.0
153	TraesCS2B01G249700	chr6D	87.023	131	12	3	4021	4150	388119329	388119203	9.640000e-30	143.0
154	TraesCS2B01G249700	chr6B	94.253	87	3	1	4300	4386	680933225	680933309	2.090000e-26	132.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2B01G249700	chr2B	258635279	258644490	9211	False	5747.333333	17012	98.039333	1	9212	3	chr2B.!!$F3	9211
1	TraesCS2B01G249700	chr2D	204489697	204498563	8866	False	1726.600000	6131	94.085250	21	8961	8	chr2D.!!$F3	8940
2	TraesCS2B01G249700	chr2A	278914410	278922754	8344	True	1647.750000	5901	95.094625	986	8924	8	chr2A.!!$R2	7938
3	TraesCS2B01G249700	chr3A	488994206	488996671	2465	False	639.250000	1820	88.016750	4797	8212	4	chr3A.!!$F2	3415
4	TraesCS2B01G249700	chr3D	366799560	366802031	2471	False	743.333333	1794	87.773333	4797	8212	3	chr3D.!!$F3	3415
5	TraesCS2B01G249700	chr3B	478012324	478014675	2351	False	607.750000	1720	87.664500	4797	8092	4	chr3B.!!$F2	3295
6	TraesCS2B01G249700	chr7D	138178090	138178698	608	True	917.000000	917	93.964000	391	996	1	chr7D.!!$R3	605

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
445	447	0.183492	ATGCCACCGCCTATGATTGT	59.817	50.000	0.00	0.00	0.00	2.71	F
1011	1024	0.175760	CCACCACGATGAGTTCCGAT	59.824	55.000	0.00	0.00	0.00	4.18	F
1786	1799	0.249398	TCTCGCTTGGTTTAGGGCTC	59.751	55.000	0.00	0.00	0.00	4.70	F
2283	2297	3.562182	TCCAACACGATCTCCTATGCTA	58.438	45.455	0.00	0.00	0.00	3.49	F
2486	2500	4.725790	ATGCTCTTTTAAATGTCCAGCC	57.274	40.909	9.41	0.00	0.00	4.85	F
3851	3909	1.513586	GATGTTCTGCTTGCAGCGC	60.514	57.895	16.91	0.00	46.26	5.92	F
4568	4646	2.025887	ACGGAGCAAAATGAGGGAATCT	60.026	45.455	0.00	0.00	0.00	2.40	F
6071	6229	0.250553	AATTGGCCACGTTCCGAGAA	60.251	50.000	3.88	0.00	0.00	2.87	F
6138	6296	0.109532	TTGGCCACATTCGGAGAACA	59.890	50.000	3.88	0.00	45.90	3.18	F
6744	6954	1.198759	ACATAACGAGTGGCCCTGGT	61.199	55.000	0.00	1.14	32.92	4.00	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2283	2297	0.179043	CATCAGGAGATGCAGCAGCT	60.179	55.000	14.45	14.45	44.61	4.24	R
2653	2667	1.993370	GACCACGGATCGAAGAAACAG	59.007	52.381	0.00	0.00	43.58	3.16	R
3404	3457	1.338136	CCAGCCTACCAGGATCCGTT	61.338	60.000	5.98	0.00	37.67	4.44	R
3405	3458	1.762460	CCAGCCTACCAGGATCCGT	60.762	63.158	5.98	1.38	37.67	4.69	R
4391	4462	1.401552	GCGGTTTGATGCTTGCTATCA	59.598	47.619	0.00	0.00	33.00	2.15	R
5355	5440	2.890808	ATGTGCCATGTAGTAGACGG	57.109	50.000	0.00	0.00	0.00	4.79	R
6119	6277	0.109532	TGTTCTCCGAATGTGGCCAA	59.890	50.000	7.24	0.00	0.00	4.52	R
7689	7899	1.561542	GGGATCTTCAGGGCTTTCAGA	59.438	52.381	0.00	0.00	0.00	3.27	R
8208	8421	6.934048	GCTTCTTCCAGCTTTGTTATCTAT	57.066	37.500	0.00	0.00	36.79	1.98	R
8809	9024	0.710588	TGAGCTACTCCCTCCTTCCA	59.289	55.000	0.00	0.00	0.00	3.53	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
93	94	2.818132	CCGTGCATCTCTCCCTCC	59.182	66.667	0.00	0.00	0.00	4.30
94	95	2.801631	CCGTGCATCTCTCCCTCCC	61.802	68.421	0.00	0.00	0.00	4.30
95	96	2.801631	CGTGCATCTCTCCCTCCCC	61.802	68.421	0.00	0.00	0.00	4.81
111	113	2.103263	CTCCCCTGTTTCCGATTCCTAG	59.897	54.545	0.00	0.00	0.00	3.02
173	175	4.733725	CCCCGTCCCCTCCTCCAA	62.734	72.222	0.00	0.00	0.00	3.53
182	184	3.154473	CTCCTCCAATCCGGCCGA	61.154	66.667	30.73	13.82	33.14	5.54
320	322	1.000771	TCCAGTCCTCTCCTCCACG	60.001	63.158	0.00	0.00	0.00	4.94
445	447	0.183492	ATGCCACCGCCTATGATTGT	59.817	50.000	0.00	0.00	0.00	2.71
622	624	2.084546	GTGCTCATTTTTCCGGTAGCT	58.915	47.619	0.00	0.00	0.00	3.32
649	651	5.248477	TGCTAGTGTTGAGAGGGTATTTTCT	59.752	40.000	0.00	0.00	0.00	2.52
723	726	5.689383	TTGAGAAGTGCTTGGTTACATTC	57.311	39.130	0.00	0.00	0.00	2.67
744	748	7.442364	ACATTCGTTGAGAGAGAATTCTTCAAA	59.558	33.333	18.26	7.74	34.89	2.69
807	811	6.994221	AGGGGATCGTAAAGTCATATTGTAG	58.006	40.000	0.00	0.00	0.00	2.74
855	861	7.229306	CCTTAATTGCTAGAGATATTGCCACAA	59.771	37.037	0.00	0.00	0.00	3.33
898	904	5.532557	TCGATGTATGGTCATTGAGTCATC	58.467	41.667	0.00	0.00	34.47	2.92
902	908	5.291971	TGTATGGTCATTGAGTCATCGATG	58.708	41.667	19.61	19.61	45.42	3.84
1011	1024	0.175760	CCACCACGATGAGTTCCGAT	59.824	55.000	0.00	0.00	0.00	4.18
1388	1401	1.075050	TCCTGAGAAGGTAGTGACGGT	59.925	52.381	0.00	0.00	0.00	4.83
1618	1631	3.634397	ACTGTGTTATGGCTGTATGCT	57.366	42.857	0.00	0.00	42.39	3.79
1754	1767	1.300971	CCATCGGCAACAGGTCAGTG	61.301	60.000	0.00	0.00	0.00	3.66
1786	1799	0.249398	TCTCGCTTGGTTTAGGGCTC	59.751	55.000	0.00	0.00	0.00	4.70
2126	2140	9.313118	GTATTCTTTGTCATTTTTGGTTCTTGT	57.687	29.630	0.00	0.00	0.00	3.16
2283	2297	3.562182	TCCAACACGATCTCCTATGCTA	58.438	45.455	0.00	0.00	0.00	3.49
2439	2453	9.739276	TTAATTCATATTTCACTGACCTGACTT	57.261	29.630	0.00	0.00	0.00	3.01
2486	2500	4.725790	ATGCTCTTTTAAATGTCCAGCC	57.274	40.909	9.41	0.00	0.00	4.85
2820	2834	4.756135	CGTGCTTGGTACTTACCCTTTTAA	59.244	41.667	2.89	0.00	45.87	1.52
2830	2844	8.954350	GGTACTTACCCTTTTAAGAATTCCTTC	58.046	37.037	0.65	0.00	40.53	3.46
2986	3001	5.390251	CGATGGTGATAATTATGCTGCAGAC	60.390	44.000	20.43	9.67	0.00	3.51
3037	3052	7.201548	GCACAATTGCCTAAGAAATTGGTATTG	60.202	37.037	5.05	0.72	44.45	1.90
3301	3319	7.418840	TGTCAAAATGCATTGTAAAATGTCC	57.581	32.000	13.82	3.04	32.87	4.02
3359	3412	8.679100	TCCATAATAATGAACTAAAAACCACGG	58.321	33.333	0.00	0.00	34.84	4.94
3370	3423	7.457024	ACTAAAAACCACGGCACTTATTATT	57.543	32.000	0.00	0.00	0.00	1.40
3404	3457	7.712205	GGGCGTAATATTTTCCTCTGTTAAGTA	59.288	37.037	0.00	0.00	0.00	2.24
3405	3458	9.101655	GGCGTAATATTTTCCTCTGTTAAGTAA	57.898	33.333	0.00	0.00	0.00	2.24
3417	3470	5.263599	TCTGTTAAGTAACGGATCCTGGTA	58.736	41.667	10.75	3.67	44.27	3.25
3821	3879	6.139679	TGGTATGTTCTTTCCCTTCAGAAT	57.860	37.500	0.00	0.00	31.71	2.40
3851	3909	1.513586	GATGTTCTGCTTGCAGCGC	60.514	57.895	16.91	0.00	46.26	5.92
3879	3937	4.637977	TGTGACTAAAACAAGCATCACACA	59.362	37.500	0.91	0.00	41.00	3.72
4255	4325	2.420642	CTGGTGGACATGAGTGTTCAG	58.579	52.381	0.00	0.00	44.42	3.02
4478	4553	6.602179	TGCGATTCTTCTATGTTTCTTTGTG	58.398	36.000	0.00	0.00	0.00	3.33
4496	4574	8.958119	TCTTTGTGTTACATAATACATCCTCC	57.042	34.615	2.55	0.00	37.20	4.30
4497	4575	8.768397	TCTTTGTGTTACATAATACATCCTCCT	58.232	33.333	2.55	0.00	37.20	3.69
4498	4576	9.396022	CTTTGTGTTACATAATACATCCTCCTT	57.604	33.333	2.55	0.00	37.20	3.36
4499	4577	8.958119	TTGTGTTACATAATACATCCTCCTTC	57.042	34.615	2.55	0.00	37.20	3.46
4500	4578	8.319057	TGTGTTACATAATACATCCTCCTTCT	57.681	34.615	0.00	0.00	33.32	2.85
4501	4579	8.204160	TGTGTTACATAATACATCCTCCTTCTG	58.796	37.037	0.00	0.00	33.32	3.02
4502	4580	8.204836	GTGTTACATAATACATCCTCCTTCTGT	58.795	37.037	0.00	0.00	0.00	3.41
4503	4581	8.768397	TGTTACATAATACATCCTCCTTCTGTT	58.232	33.333	0.00	0.00	0.00	3.16
4504	4582	9.262358	GTTACATAATACATCCTCCTTCTGTTC	57.738	37.037	0.00	0.00	0.00	3.18
4505	4583	6.831976	ACATAATACATCCTCCTTCTGTTCC	58.168	40.000	0.00	0.00	0.00	3.62
4506	4584	4.779993	AATACATCCTCCTTCTGTTCCC	57.220	45.455	0.00	0.00	0.00	3.97
4507	4585	2.044793	ACATCCTCCTTCTGTTCCCA	57.955	50.000	0.00	0.00	0.00	4.37
4508	4586	2.348472	ACATCCTCCTTCTGTTCCCAA	58.652	47.619	0.00	0.00	0.00	4.12
4509	4587	2.716424	ACATCCTCCTTCTGTTCCCAAA	59.284	45.455	0.00	0.00	0.00	3.28
4510	4588	3.334881	ACATCCTCCTTCTGTTCCCAAAT	59.665	43.478	0.00	0.00	0.00	2.32
4511	4589	4.540099	ACATCCTCCTTCTGTTCCCAAATA	59.460	41.667	0.00	0.00	0.00	1.40
4512	4590	5.194537	ACATCCTCCTTCTGTTCCCAAATAT	59.805	40.000	0.00	0.00	0.00	1.28
4513	4591	6.389869	ACATCCTCCTTCTGTTCCCAAATATA	59.610	38.462	0.00	0.00	0.00	0.86
4514	4592	7.074237	ACATCCTCCTTCTGTTCCCAAATATAT	59.926	37.037	0.00	0.00	0.00	0.86
4515	4593	6.841601	TCCTCCTTCTGTTCCCAAATATATG	58.158	40.000	0.00	0.00	0.00	1.78
4516	4594	6.389869	TCCTCCTTCTGTTCCCAAATATATGT	59.610	38.462	0.00	0.00	0.00	2.29
4517	4595	6.712547	CCTCCTTCTGTTCCCAAATATATGTC	59.287	42.308	0.00	0.00	0.00	3.06
4518	4596	7.420680	CCTCCTTCTGTTCCCAAATATATGTCT	60.421	40.741	0.00	0.00	0.00	3.41
4519	4597	7.872138	TCCTTCTGTTCCCAAATATATGTCTT	58.128	34.615	0.00	0.00	0.00	3.01
4520	4598	8.336235	TCCTTCTGTTCCCAAATATATGTCTTT	58.664	33.333	0.00	0.00	0.00	2.52
4521	4599	8.971073	CCTTCTGTTCCCAAATATATGTCTTTT	58.029	33.333	0.00	0.00	0.00	2.27
4539	4617	8.519799	TGTCTTTTTAGAGATTTCAACAAGGT	57.480	30.769	0.00	0.00	0.00	3.50
4540	4618	9.621629	TGTCTTTTTAGAGATTTCAACAAGGTA	57.378	29.630	0.00	0.00	0.00	3.08
4541	4619	9.880064	GTCTTTTTAGAGATTTCAACAAGGTAC	57.120	33.333	0.00	0.00	0.00	3.34
4549	4627	7.974501	AGAGATTTCAACAAGGTACTACATACG	59.025	37.037	0.00	0.00	38.49	3.06
4550	4628	7.039882	AGATTTCAACAAGGTACTACATACGG	58.960	38.462	0.00	0.00	38.49	4.02
4551	4629	5.981088	TTCAACAAGGTACTACATACGGA	57.019	39.130	0.00	0.00	38.49	4.69
4552	4630	5.571784	TCAACAAGGTACTACATACGGAG	57.428	43.478	0.00	0.00	38.49	4.63
4553	4631	4.110482	CAACAAGGTACTACATACGGAGC	58.890	47.826	0.00	0.00	38.49	4.70
4554	4632	3.359033	ACAAGGTACTACATACGGAGCA	58.641	45.455	0.00	0.00	38.49	4.26
4555	4633	3.765511	ACAAGGTACTACATACGGAGCAA	59.234	43.478	0.00	0.00	38.49	3.91
4556	4634	4.221262	ACAAGGTACTACATACGGAGCAAA	59.779	41.667	0.00	0.00	38.49	3.68
4557	4635	5.172934	CAAGGTACTACATACGGAGCAAAA	58.827	41.667	0.00	0.00	38.49	2.44
4558	4636	5.609533	AGGTACTACATACGGAGCAAAAT	57.390	39.130	0.00	0.00	36.02	1.82
4559	4637	5.357257	AGGTACTACATACGGAGCAAAATG	58.643	41.667	0.00	0.00	36.02	2.32
4560	4638	5.128171	AGGTACTACATACGGAGCAAAATGA	59.872	40.000	0.00	0.00	36.02	2.57
4561	4639	5.462398	GGTACTACATACGGAGCAAAATGAG	59.538	44.000	0.00	0.00	34.22	2.90
4562	4640	4.442706	ACTACATACGGAGCAAAATGAGG	58.557	43.478	0.00	0.00	0.00	3.86
4563	4641	2.643551	ACATACGGAGCAAAATGAGGG	58.356	47.619	0.00	0.00	0.00	4.30
4564	4642	2.238646	ACATACGGAGCAAAATGAGGGA	59.761	45.455	0.00	0.00	0.00	4.20
4565	4643	3.278574	CATACGGAGCAAAATGAGGGAA	58.721	45.455	0.00	0.00	0.00	3.97
4566	4644	2.514458	ACGGAGCAAAATGAGGGAAT	57.486	45.000	0.00	0.00	0.00	3.01
4567	4645	2.369394	ACGGAGCAAAATGAGGGAATC	58.631	47.619	0.00	0.00	0.00	2.52
4568	4646	2.025887	ACGGAGCAAAATGAGGGAATCT	60.026	45.455	0.00	0.00	0.00	2.40
4569	4647	3.199946	ACGGAGCAAAATGAGGGAATCTA	59.800	43.478	0.00	0.00	0.00	1.98
4570	4648	3.561725	CGGAGCAAAATGAGGGAATCTAC	59.438	47.826	0.00	0.00	0.00	2.59
4571	4649	4.526970	GGAGCAAAATGAGGGAATCTACA	58.473	43.478	0.00	0.00	0.00	2.74
4572	4650	4.336713	GGAGCAAAATGAGGGAATCTACAC	59.663	45.833	0.00	0.00	0.00	2.90
4573	4651	5.184892	AGCAAAATGAGGGAATCTACACT	57.815	39.130	0.00	0.00	0.00	3.55
4574	4652	5.189180	AGCAAAATGAGGGAATCTACACTC	58.811	41.667	0.00	0.00	40.36	3.51
4575	4653	5.045286	AGCAAAATGAGGGAATCTACACTCT	60.045	40.000	0.00	0.00	40.56	3.24
4576	4654	6.156949	AGCAAAATGAGGGAATCTACACTCTA	59.843	38.462	0.00	0.00	40.56	2.43
4577	4655	6.823689	GCAAAATGAGGGAATCTACACTCTAA	59.176	38.462	0.00	0.00	40.56	2.10
4578	4656	7.336931	GCAAAATGAGGGAATCTACACTCTAAA	59.663	37.037	0.00	0.00	40.56	1.85
4579	4657	9.231297	CAAAATGAGGGAATCTACACTCTAAAA	57.769	33.333	0.00	0.00	40.56	1.52
4580	4658	9.981460	AAAATGAGGGAATCTACACTCTAAAAT	57.019	29.630	0.00	0.00	40.56	1.82
4584	4662	9.213777	TGAGGGAATCTACACTCTAAAATATGT	57.786	33.333	0.00	0.00	40.56	2.29
4585	4663	9.699703	GAGGGAATCTACACTCTAAAATATGTC	57.300	37.037	0.00	0.00	37.35	3.06
4586	4664	9.440761	AGGGAATCTACACTCTAAAATATGTCT	57.559	33.333	0.00	0.00	0.00	3.41
4608	4686	9.955102	TGTCTATATACATCCGTATGTTCTAGT	57.045	33.333	0.00	0.00	44.07	2.57
4610	4688	9.610705	TCTATATACATCCGTATGTTCTAGTCC	57.389	37.037	0.00	0.00	44.07	3.85
4611	4689	9.392259	CTATATACATCCGTATGTTCTAGTCCA	57.608	37.037	0.00	0.00	44.07	4.02
4612	4690	8.824756	ATATACATCCGTATGTTCTAGTCCAT	57.175	34.615	0.00	0.00	44.07	3.41
4613	4691	5.871396	ACATCCGTATGTTCTAGTCCATT	57.129	39.130	0.00	0.00	44.07	3.16
4614	4692	6.235231	ACATCCGTATGTTCTAGTCCATTT	57.765	37.500	0.00	0.00	44.07	2.32
4615	4693	6.049149	ACATCCGTATGTTCTAGTCCATTTG	58.951	40.000	0.00	0.00	44.07	2.32
4616	4694	5.925506	TCCGTATGTTCTAGTCCATTTGA	57.074	39.130	2.95	0.00	0.00	2.69
4617	4695	6.288941	TCCGTATGTTCTAGTCCATTTGAA	57.711	37.500	2.95	0.00	0.00	2.69
4618	4696	6.703319	TCCGTATGTTCTAGTCCATTTGAAA	58.297	36.000	2.95	0.00	0.00	2.69
4619	4697	6.592607	TCCGTATGTTCTAGTCCATTTGAAAC	59.407	38.462	2.95	0.00	0.00	2.78
4620	4698	6.594159	CCGTATGTTCTAGTCCATTTGAAACT	59.406	38.462	2.95	0.00	0.00	2.66
4621	4699	7.119262	CCGTATGTTCTAGTCCATTTGAAACTT	59.881	37.037	2.95	0.00	0.00	2.66
4622	4700	8.169268	CGTATGTTCTAGTCCATTTGAAACTTC	58.831	37.037	2.95	0.00	0.00	3.01
4623	4701	9.220767	GTATGTTCTAGTCCATTTGAAACTTCT	57.779	33.333	2.95	0.00	0.00	2.85
4625	4703	9.793259	ATGTTCTAGTCCATTTGAAACTTCTAA	57.207	29.630	0.00	0.00	0.00	2.10
4626	4704	9.621629	TGTTCTAGTCCATTTGAAACTTCTAAA	57.378	29.630	0.00	0.00	0.00	1.85
4632	4710	8.966868	AGTCCATTTGAAACTTCTAAAAAGACA	58.033	29.630	12.13	0.00	30.14	3.41
4633	4711	9.750125	GTCCATTTGAAACTTCTAAAAAGACAT	57.250	29.630	0.00	0.00	0.00	3.06
4650	4728	8.904099	AAAAGACATATATTTAGGAACGGAGG	57.096	34.615	0.00	0.00	0.00	4.30
4651	4729	6.607004	AGACATATATTTAGGAACGGAGGG	57.393	41.667	0.00	0.00	0.00	4.30
4652	4730	6.320518	AGACATATATTTAGGAACGGAGGGA	58.679	40.000	0.00	0.00	0.00	4.20
4653	4731	6.437793	AGACATATATTTAGGAACGGAGGGAG	59.562	42.308	0.00	0.00	0.00	4.30
4688	4766	3.198068	TGAAGCGAATAGAACATGGCTC	58.802	45.455	0.00	0.00	0.00	4.70
5030	5115	4.617959	TGAGAAAACGTCTGAACAGGTAG	58.382	43.478	1.93	0.00	36.41	3.18
5151	5236	2.239654	TGTTGGTGATCAAGGGGAGATC	59.760	50.000	0.00	0.00	41.72	2.75
5222	5307	3.637998	AGCTGTCAGTGATTTTGCAAG	57.362	42.857	0.00	0.00	0.00	4.01
5357	5442	9.672086	TGTTTAATGATTTTTGAGTTACTTCCG	57.328	29.630	0.00	0.00	0.00	4.30
5367	5452	7.458409	TTTGAGTTACTTCCGTCTACTACAT	57.542	36.000	0.00	0.00	0.00	2.29
5369	5454	5.356190	TGAGTTACTTCCGTCTACTACATGG	59.644	44.000	0.00	0.00	0.00	3.66
5417	5502	8.818141	ACTTCTATATACCGTGAATTGTGATG	57.182	34.615	0.00	0.00	0.00	3.07
5519	5604	5.324409	ACAAATCCCTACTGCTTCATTCAA	58.676	37.500	0.00	0.00	0.00	2.69
5539	5624	9.971922	CATTCAAATAGGAATAGTTTGGAATCC	57.028	33.333	0.00	0.00	35.79	3.01
5545	5630	6.840780	AGGAATAGTTTGGAATCCAGTTTG	57.159	37.500	0.86	0.00	33.81	2.93
5558	5643	3.351740	TCCAGTTTGCTTTCAGAACACA	58.648	40.909	0.00	0.00	0.00	3.72
5736	5828	5.708877	AGACCACTCAACTTACTCAGTAC	57.291	43.478	0.00	0.00	32.94	2.73
6018	6111	6.328934	TCAATTCATAGGCTGGTAACCTCATA	59.671	38.462	0.00	0.00	38.81	2.15
6062	6220	7.905604	TTCTGATTAGATATAATTGGCCACG	57.094	36.000	3.88	0.00	31.81	4.94
6063	6221	7.004555	TCTGATTAGATATAATTGGCCACGT	57.995	36.000	3.88	0.00	0.00	4.49
6064	6222	7.450074	TCTGATTAGATATAATTGGCCACGTT	58.550	34.615	3.88	6.33	0.00	3.99
6065	6223	7.602644	TCTGATTAGATATAATTGGCCACGTTC	59.397	37.037	3.88	0.00	0.00	3.95
6066	6224	6.653320	TGATTAGATATAATTGGCCACGTTCC	59.347	38.462	3.88	0.00	0.00	3.62
6067	6225	3.399330	AGATATAATTGGCCACGTTCCG	58.601	45.455	3.88	0.00	0.00	4.30
6068	6226	2.983907	TATAATTGGCCACGTTCCGA	57.016	45.000	3.88	0.00	0.00	4.55
6069	6227	1.663695	ATAATTGGCCACGTTCCGAG	58.336	50.000	3.88	0.00	0.00	4.63
6070	6228	0.609151	TAATTGGCCACGTTCCGAGA	59.391	50.000	3.88	0.00	0.00	4.04
6071	6229	0.250553	AATTGGCCACGTTCCGAGAA	60.251	50.000	3.88	0.00	0.00	2.87
6072	6230	0.953960	ATTGGCCACGTTCCGAGAAC	60.954	55.000	3.88	6.68	0.00	3.01
6073	6231	2.029964	GGCCACGTTCCGAGAACA	59.970	61.111	14.43	0.00	0.00	3.18
6074	6232	2.315386	GGCCACGTTCCGAGAACAC	61.315	63.158	14.43	3.83	0.00	3.32
6075	6233	1.300697	GCCACGTTCCGAGAACACT	60.301	57.895	14.43	0.00	0.00	3.55
6076	6234	0.878961	GCCACGTTCCGAGAACACTT	60.879	55.000	14.43	0.00	0.00	3.16
6077	6235	1.578583	CCACGTTCCGAGAACACTTT	58.421	50.000	14.43	0.00	0.00	2.66
6078	6236	2.746269	CCACGTTCCGAGAACACTTTA	58.254	47.619	14.43	0.00	0.00	1.85
6079	6237	2.729882	CCACGTTCCGAGAACACTTTAG	59.270	50.000	14.43	3.02	0.00	1.85
6080	6238	2.729882	CACGTTCCGAGAACACTTTAGG	59.270	50.000	14.43	2.49	0.00	2.69
6081	6239	2.363359	ACGTTCCGAGAACACTTTAGGT	59.637	45.455	14.43	2.96	0.00	3.08
6082	6240	3.181472	ACGTTCCGAGAACACTTTAGGTT	60.181	43.478	14.43	0.00	0.00	3.50
6083	6241	4.037923	ACGTTCCGAGAACACTTTAGGTTA	59.962	41.667	14.43	0.00	0.00	2.85
6084	6242	4.984161	CGTTCCGAGAACACTTTAGGTTAA	59.016	41.667	14.43	0.00	0.00	2.01
6085	6243	5.107722	CGTTCCGAGAACACTTTAGGTTAAC	60.108	44.000	14.43	0.00	0.00	2.01
6086	6244	5.534207	TCCGAGAACACTTTAGGTTAACA	57.466	39.130	8.10	0.00	0.00	2.41
6087	6245	6.105397	TCCGAGAACACTTTAGGTTAACAT	57.895	37.500	8.10	2.34	0.00	2.71
6088	6246	6.527423	TCCGAGAACACTTTAGGTTAACATT	58.473	36.000	8.10	0.00	0.00	2.71
6089	6247	6.647895	TCCGAGAACACTTTAGGTTAACATTC	59.352	38.462	8.10	0.00	0.00	2.67
6090	6248	6.649557	CCGAGAACACTTTAGGTTAACATTCT	59.350	38.462	8.10	0.00	0.00	2.40
6091	6249	7.172703	CCGAGAACACTTTAGGTTAACATTCTT	59.827	37.037	8.10	0.00	0.00	2.52
6092	6250	9.199982	CGAGAACACTTTAGGTTAACATTCTTA	57.800	33.333	8.10	0.00	0.00	2.10
6094	6252	9.000486	AGAACACTTTAGGTTAACATTCTTAGC	58.000	33.333	8.10	0.00	0.00	3.09
6095	6253	7.683437	ACACTTTAGGTTAACATTCTTAGCC	57.317	36.000	8.10	0.00	0.00	3.93
6096	6254	7.459234	ACACTTTAGGTTAACATTCTTAGCCT	58.541	34.615	8.10	1.72	38.76	4.58
6097	6255	7.942894	ACACTTTAGGTTAACATTCTTAGCCTT	59.057	33.333	8.10	0.00	36.98	4.35
6098	6256	9.444600	CACTTTAGGTTAACATTCTTAGCCTTA	57.555	33.333	8.10	0.00	36.98	2.69
6104	6262	9.700831	AGGTTAACATTCTTAGCCTTATGATTT	57.299	29.630	8.10	0.00	32.65	2.17
6105	6263	9.952188	GGTTAACATTCTTAGCCTTATGATTTC	57.048	33.333	8.10	0.00	0.00	2.17
6109	6267	9.638176	AACATTCTTAGCCTTATGATTTCTGAT	57.362	29.630	0.00	0.00	0.00	2.90
6110	6268	9.638176	ACATTCTTAGCCTTATGATTTCTGATT	57.362	29.630	0.00	0.00	0.00	2.57
6131	6289	8.267620	TGATTAGATATAATTGGCCACATTCG	57.732	34.615	3.88	0.00	0.00	3.34
6138	6296	0.109532	TTGGCCACATTCGGAGAACA	59.890	50.000	3.88	0.00	45.90	3.18
6358	6567	5.902613	TGCTTGCTGTATTAATGCTTTCT	57.097	34.783	5.11	0.00	0.00	2.52
6538	6748	4.658901	AGTTCTTTGGAGGGTAAGAGAACA	59.341	41.667	14.23	0.00	43.18	3.18
6590	6800	2.158623	TGAATCCACTGTCTGCAAACCT	60.159	45.455	0.00	0.00	0.00	3.50
6744	6954	1.198759	ACATAACGAGTGGCCCTGGT	61.199	55.000	0.00	1.14	32.92	4.00
6984	7194	1.918253	ATCCCTCACAGTGGATGGC	59.082	57.895	0.00	0.00	39.89	4.40
7524	7734	4.121669	GCAGAGGAGAGCGACGCA	62.122	66.667	23.70	0.00	0.00	5.24
7566	7776	1.202582	CCAGAGTCTGACCACCTAACG	59.797	57.143	22.09	0.00	32.44	3.18
7689	7899	5.421693	AGTGAGATCTCAACTGCTAGACATT	59.578	40.000	26.70	0.00	41.85	2.71
8287	8500	9.590451	CGAGGGAAACTTGTACAATAGTTATAA	57.410	33.333	9.13	0.00	33.66	0.98
8320	8533	1.066858	TCACTCACGCCTGAAGGAATC	60.067	52.381	0.00	0.00	37.39	2.52
8388	8603	9.500785	TGAATGTAACATTTACATCACTTGAGA	57.499	29.630	11.10	0.00	37.18	3.27
8428	8643	1.068333	GCACTTGTCACGATGGCAAAT	60.068	47.619	0.00	0.00	41.88	2.32
8429	8644	2.607771	GCACTTGTCACGATGGCAAATT	60.608	45.455	0.00	0.00	41.88	1.82
8430	8645	2.981805	CACTTGTCACGATGGCAAATTG	59.018	45.455	0.00	0.00	41.88	2.32
8463	8678	5.107065	GGTGCTTGTTTGTATGTCAGTACTC	60.107	44.000	0.00	0.00	0.00	2.59
8464	8679	4.994852	TGCTTGTTTGTATGTCAGTACTCC	59.005	41.667	0.00	0.00	0.00	3.85
8465	8680	4.392138	GCTTGTTTGTATGTCAGTACTCCC	59.608	45.833	0.00	0.00	0.00	4.30
8466	8681	5.794894	CTTGTTTGTATGTCAGTACTCCCT	58.205	41.667	0.00	0.00	0.00	4.20
8467	8682	5.401531	TGTTTGTATGTCAGTACTCCCTC	57.598	43.478	0.00	0.00	0.00	4.30
8468	8683	5.084519	TGTTTGTATGTCAGTACTCCCTCT	58.915	41.667	0.00	0.00	0.00	3.69
8469	8684	5.185249	TGTTTGTATGTCAGTACTCCCTCTC	59.815	44.000	0.00	0.00	0.00	3.20
8470	8685	3.899726	TGTATGTCAGTACTCCCTCTCC	58.100	50.000	0.00	0.00	0.00	3.71
8471	8686	2.463047	ATGTCAGTACTCCCTCTCCC	57.537	55.000	0.00	0.00	0.00	4.30
8472	8687	1.383963	TGTCAGTACTCCCTCTCCCT	58.616	55.000	0.00	0.00	0.00	4.20
8473	8688	1.285373	TGTCAGTACTCCCTCTCCCTC	59.715	57.143	0.00	0.00	0.00	4.30
8474	8689	0.927767	TCAGTACTCCCTCTCCCTCC	59.072	60.000	0.00	0.00	0.00	4.30
8475	8690	0.466555	CAGTACTCCCTCTCCCTCCG	60.467	65.000	0.00	0.00	0.00	4.63
8476	8691	0.920271	AGTACTCCCTCTCCCTCCGT	60.920	60.000	0.00	0.00	0.00	4.69
8477	8692	0.842635	GTACTCCCTCTCCCTCCGTA	59.157	60.000	0.00	0.00	0.00	4.02
8478	8693	1.213926	GTACTCCCTCTCCCTCCGTAA	59.786	57.143	0.00	0.00	0.00	3.18
8479	8694	0.708802	ACTCCCTCTCCCTCCGTAAA	59.291	55.000	0.00	0.00	0.00	2.01
8480	8695	1.112950	CTCCCTCTCCCTCCGTAAAC	58.887	60.000	0.00	0.00	0.00	2.01
8481	8696	0.410663	TCCCTCTCCCTCCGTAAACA	59.589	55.000	0.00	0.00	0.00	2.83
8482	8697	1.203212	TCCCTCTCCCTCCGTAAACAA	60.203	52.381	0.00	0.00	0.00	2.83
8483	8698	1.626825	CCCTCTCCCTCCGTAAACAAA	59.373	52.381	0.00	0.00	0.00	2.83
8484	8699	2.238898	CCCTCTCCCTCCGTAAACAAAT	59.761	50.000	0.00	0.00	0.00	2.32
8485	8700	3.453353	CCCTCTCCCTCCGTAAACAAATA	59.547	47.826	0.00	0.00	0.00	1.40
8486	8701	4.102681	CCCTCTCCCTCCGTAAACAAATAT	59.897	45.833	0.00	0.00	0.00	1.28
8487	8702	5.306160	CCCTCTCCCTCCGTAAACAAATATA	59.694	44.000	0.00	0.00	0.00	0.86
8488	8703	6.183361	CCCTCTCCCTCCGTAAACAAATATAA	60.183	42.308	0.00	0.00	0.00	0.98
8489	8704	6.929606	CCTCTCCCTCCGTAAACAAATATAAG	59.070	42.308	0.00	0.00	0.00	1.73
8490	8705	7.201974	CCTCTCCCTCCGTAAACAAATATAAGA	60.202	40.741	0.00	0.00	0.00	2.10
8491	8706	7.723324	TCTCCCTCCGTAAACAAATATAAGAG	58.277	38.462	0.00	0.00	0.00	2.85
8492	8707	6.285990	TCCCTCCGTAAACAAATATAAGAGC	58.714	40.000	0.00	0.00	0.00	4.09
8493	8708	6.053005	CCCTCCGTAAACAAATATAAGAGCA	58.947	40.000	0.00	0.00	0.00	4.26
8494	8709	6.710744	CCCTCCGTAAACAAATATAAGAGCAT	59.289	38.462	0.00	0.00	0.00	3.79
8495	8710	7.228706	CCCTCCGTAAACAAATATAAGAGCATT	59.771	37.037	0.00	0.00	0.00	3.56
8496	8711	8.621286	CCTCCGTAAACAAATATAAGAGCATTT	58.379	33.333	0.00	0.00	0.00	2.32
8527	8742	9.654663	AACTAAAATAGTGATCTAAACGCTCTT	57.345	29.630	0.00	0.00	39.39	2.85
8545	8760	9.490379	AACGCTCTTATAATTATTTACAGAGGG	57.510	33.333	22.69	22.69	41.36	4.30
8546	8761	8.867097	ACGCTCTTATAATTATTTACAGAGGGA	58.133	33.333	26.59	2.24	39.94	4.20
8547	8762	9.360093	CGCTCTTATAATTATTTACAGAGGGAG	57.640	37.037	21.38	10.27	39.94	4.30
8590	8805	9.516546	CTTGGTTCTTACTTACTTTTATTCCCT	57.483	33.333	0.00	0.00	0.00	4.20
8591	8806	9.511272	TTGGTTCTTACTTACTTTTATTCCCTC	57.489	33.333	0.00	0.00	0.00	4.30
8592	8807	8.105197	TGGTTCTTACTTACTTTTATTCCCTCC	58.895	37.037	0.00	0.00	0.00	4.30
8595	8810	9.955102	TTCTTACTTACTTTTATTCCCTCCTTC	57.045	33.333	0.00	0.00	0.00	3.46
8596	8811	8.546322	TCTTACTTACTTTTATTCCCTCCTTCC	58.454	37.037	0.00	0.00	0.00	3.46
8598	8813	7.285340	ACTTACTTTTATTCCCTCCTTCCAT	57.715	36.000	0.00	0.00	0.00	3.41
8599	8814	7.347252	ACTTACTTTTATTCCCTCCTTCCATC	58.653	38.462	0.00	0.00	0.00	3.51
8601	8816	8.632731	TTACTTTTATTCCCTCCTTCCATCTA	57.367	34.615	0.00	0.00	0.00	1.98
8602	8817	7.713704	ACTTTTATTCCCTCCTTCCATCTAT	57.286	36.000	0.00	0.00	0.00	1.98
8607	8822	9.507381	TTTATTCCCTCCTTCCATCTATATAGG	57.493	37.037	9.89	0.00	0.00	2.57
8608	8823	5.489427	TCCCTCCTTCCATCTATATAGGG	57.511	47.826	9.89	4.49	43.23	3.53
8609	8824	3.970640	CCCTCCTTCCATCTATATAGGGC	59.029	52.174	9.89	0.00	36.30	5.19
8611	8826	4.327332	CCTCCTTCCATCTATATAGGGCCT	60.327	50.000	12.58	12.58	0.00	5.19
8614	8829	7.009960	TCCTTCCATCTATATAGGGCCTAAT	57.990	40.000	18.91	14.19	0.00	1.73
8617	8832	6.978674	TCCATCTATATAGGGCCTAATTCG	57.021	41.667	18.91	7.12	0.00	3.34
8618	8833	6.441222	TCCATCTATATAGGGCCTAATTCGT	58.559	40.000	18.91	2.76	0.00	3.85
8619	8834	6.901300	TCCATCTATATAGGGCCTAATTCGTT	59.099	38.462	18.91	1.94	0.00	3.85
8620	8835	7.402071	TCCATCTATATAGGGCCTAATTCGTTT	59.598	37.037	18.91	1.12	0.00	3.60
8621	8836	8.047310	CCATCTATATAGGGCCTAATTCGTTTT	58.953	37.037	18.91	0.30	0.00	2.43
8624	8839	6.796705	ATATAGGGCCTAATTCGTTTTTCG	57.203	37.500	18.91	0.00	41.41	3.46
8636	8851	3.884169	TCGTTTTTCGAGAATGCCTTTG	58.116	40.909	0.00	0.00	44.01	2.77
8637	8852	3.562141	TCGTTTTTCGAGAATGCCTTTGA	59.438	39.130	0.00	0.00	44.01	2.69
8640	8855	5.333798	CGTTTTTCGAGAATGCCTTTGACTA	60.334	40.000	0.00	0.00	42.86	2.59
8641	8856	6.612306	GTTTTTCGAGAATGCCTTTGACTAT	58.388	36.000	0.00	0.00	0.00	2.12
8642	8857	6.817765	TTTTCGAGAATGCCTTTGACTATT	57.182	33.333	0.00	0.00	0.00	1.73
8644	8859	5.084818	TCGAGAATGCCTTTGACTATTGA	57.915	39.130	0.00	0.00	0.00	2.57
8645	8860	4.870426	TCGAGAATGCCTTTGACTATTGAC	59.130	41.667	0.00	0.00	0.00	3.18
8648	8863	6.506500	AGAATGCCTTTGACTATTGACAAG	57.493	37.500	0.00	0.00	0.00	3.16
8650	8865	6.888632	AGAATGCCTTTGACTATTGACAAGAT	59.111	34.615	0.00	0.00	0.00	2.40
8652	8867	8.579850	AATGCCTTTGACTATTGACAAGATTA	57.420	30.769	0.00	0.00	0.00	1.75
8653	8868	7.994425	TGCCTTTGACTATTGACAAGATTAA	57.006	32.000	0.00	0.00	0.00	1.40
8654	8869	8.579850	TGCCTTTGACTATTGACAAGATTAAT	57.420	30.769	0.00	0.00	0.00	1.40
8655	8870	9.679661	TGCCTTTGACTATTGACAAGATTAATA	57.320	29.630	0.00	0.00	0.00	0.98
8699	8914	8.677300	TGTGAAAAATATATCACTGAAAGCTCC	58.323	33.333	13.96	0.00	44.86	4.70
8700	8915	8.897752	GTGAAAAATATATCACTGAAAGCTCCT	58.102	33.333	8.29	0.00	42.07	3.69
8701	8916	9.466497	TGAAAAATATATCACTGAAAGCTCCTT	57.534	29.630	0.00	0.00	37.60	3.36
8717	8932	7.707624	AAGCTCCTTTCACATATGAATTTGA	57.292	32.000	10.38	0.00	44.36	2.69
8719	8934	5.967674	GCTCCTTTCACATATGAATTTGACG	59.032	40.000	10.38	0.00	44.36	4.35
8720	8935	6.435430	TCCTTTCACATATGAATTTGACGG	57.565	37.500	10.38	6.07	44.36	4.79
8723	8938	7.773224	TCCTTTCACATATGAATTTGACGGTAT	59.227	33.333	10.38	0.00	44.36	2.73
8724	8939	7.857389	CCTTTCACATATGAATTTGACGGTATG	59.143	37.037	10.38	0.00	44.36	2.39
8726	8941	6.054941	TCACATATGAATTTGACGGTATGCT	58.945	36.000	10.38	0.00	0.00	3.79
8728	8943	7.066887	TCACATATGAATTTGACGGTATGCTTT	59.933	33.333	10.38	0.00	0.00	3.51
8730	8945	9.066892	ACATATGAATTTGACGGTATGCTTTAT	57.933	29.630	10.38	0.00	0.00	1.40
8731	8946	9.333497	CATATGAATTTGACGGTATGCTTTATG	57.667	33.333	0.00	0.00	0.00	1.90
8732	8947	5.577835	TGAATTTGACGGTATGCTTTATGC	58.422	37.500	0.00	0.00	43.25	3.14
8776	8991	9.515226	TTATTGCTCTAACACTAGGTCAAAATT	57.485	29.630	0.00	0.00	0.00	1.82
8779	8994	6.594159	TGCTCTAACACTAGGTCAAAATTAGC	59.406	38.462	0.00	0.00	0.00	3.09
8780	8995	6.037281	GCTCTAACACTAGGTCAAAATTAGCC	59.963	42.308	0.00	0.00	0.00	3.93
8781	8996	7.253905	TCTAACACTAGGTCAAAATTAGCCT	57.746	36.000	0.00	0.00	35.28	4.58
8783	8998	4.504858	ACACTAGGTCAAAATTAGCCTCG	58.495	43.478	0.00	0.00	32.90	4.63
8784	8999	4.222145	ACACTAGGTCAAAATTAGCCTCGA	59.778	41.667	0.00	0.00	32.90	4.04
8785	9000	5.175859	CACTAGGTCAAAATTAGCCTCGAA	58.824	41.667	0.00	0.00	32.90	3.71
8787	9002	6.148811	CACTAGGTCAAAATTAGCCTCGAAAA	59.851	38.462	0.00	0.00	32.90	2.29
8788	9003	6.713450	ACTAGGTCAAAATTAGCCTCGAAAAA	59.287	34.615	0.00	0.00	32.90	1.94
8789	9004	5.769367	AGGTCAAAATTAGCCTCGAAAAAC	58.231	37.500	0.00	0.00	0.00	2.43
8790	9005	4.615541	GGTCAAAATTAGCCTCGAAAAACG	59.384	41.667	0.00	0.00	44.09	3.60
8791	9006	4.088071	GTCAAAATTAGCCTCGAAAAACGC	59.912	41.667	0.00	0.00	42.26	4.84
8792	9007	3.907894	AAATTAGCCTCGAAAAACGCA	57.092	38.095	0.00	0.00	42.26	5.24
8794	9009	4.434713	AATTAGCCTCGAAAAACGCATT	57.565	36.364	0.00	0.00	42.26	3.56
8795	9010	5.554822	AATTAGCCTCGAAAAACGCATTA	57.445	34.783	0.00	0.00	42.26	1.90
8796	9011	4.593597	TTAGCCTCGAAAAACGCATTAG	57.406	40.909	0.00	0.00	42.26	1.73
8797	9012	1.737793	AGCCTCGAAAAACGCATTAGG	59.262	47.619	0.00	0.00	42.26	2.69
8798	9013	1.467342	GCCTCGAAAAACGCATTAGGT	59.533	47.619	0.00	0.00	42.26	3.08
8799	9014	2.475685	GCCTCGAAAAACGCATTAGGTC	60.476	50.000	0.00	0.00	42.26	3.85
8800	9015	2.095372	CCTCGAAAAACGCATTAGGTCC	59.905	50.000	0.00	0.00	42.26	4.46
8801	9016	3.000727	CTCGAAAAACGCATTAGGTCCT	58.999	45.455	0.00	0.00	42.26	3.85
8803	9018	4.761975	TCGAAAAACGCATTAGGTCCTAT	58.238	39.130	0.00	0.00	42.26	2.57
8804	9019	5.904941	TCGAAAAACGCATTAGGTCCTATA	58.095	37.500	0.00	0.00	42.26	1.31
8807	9022	7.042321	TCGAAAAACGCATTAGGTCCTATATTG	60.042	37.037	0.00	0.00	42.26	1.90
8809	9024	8.691661	AAAAACGCATTAGGTCCTATATTGAT	57.308	30.769	0.00	0.00	0.00	2.57
8810	9025	7.672983	AAACGCATTAGGTCCTATATTGATG	57.327	36.000	0.00	1.45	0.00	3.07
8811	9026	5.734720	ACGCATTAGGTCCTATATTGATGG	58.265	41.667	0.00	0.00	0.00	3.51
8812	9027	5.483937	ACGCATTAGGTCCTATATTGATGGA	59.516	40.000	0.00	0.00	0.00	3.41
8813	9028	6.013725	ACGCATTAGGTCCTATATTGATGGAA	60.014	38.462	0.00	0.00	0.00	3.53
8814	9029	6.536582	CGCATTAGGTCCTATATTGATGGAAG	59.463	42.308	0.00	0.00	0.00	3.46
8816	9031	7.311297	GCATTAGGTCCTATATTGATGGAAGGA	60.311	40.741	0.00	0.00	33.97	3.36
8817	9032	7.798710	TTAGGTCCTATATTGATGGAAGGAG	57.201	40.000	0.00	0.00	37.03	3.69
8818	9033	5.097234	AGGTCCTATATTGATGGAAGGAGG	58.903	45.833	0.00	0.00	37.03	4.30
8819	9034	4.226168	GGTCCTATATTGATGGAAGGAGGG	59.774	50.000	0.00	0.00	37.03	4.30
8820	9035	5.094387	GTCCTATATTGATGGAAGGAGGGA	58.906	45.833	0.00	0.00	37.03	4.20
8821	9036	5.188751	GTCCTATATTGATGGAAGGAGGGAG	59.811	48.000	0.00	0.00	37.03	4.30
8822	9037	5.097234	CCTATATTGATGGAAGGAGGGAGT	58.903	45.833	0.00	0.00	0.00	3.85
8824	9039	6.382570	CCTATATTGATGGAAGGAGGGAGTAG	59.617	46.154	0.00	0.00	0.00	2.57
8825	9040	1.794714	TGATGGAAGGAGGGAGTAGC	58.205	55.000	0.00	0.00	0.00	3.58
8826	9041	1.292242	TGATGGAAGGAGGGAGTAGCT	59.708	52.381	0.00	0.00	0.00	3.32
8827	9042	1.967779	GATGGAAGGAGGGAGTAGCTC	59.032	57.143	0.00	0.00	0.00	4.09
8828	9043	0.710588	TGGAAGGAGGGAGTAGCTCA	59.289	55.000	0.00	0.00	31.08	4.26
8829	9044	1.078823	TGGAAGGAGGGAGTAGCTCAA	59.921	52.381	0.00	0.00	31.08	3.02
8830	9045	2.188817	GGAAGGAGGGAGTAGCTCAAA	58.811	52.381	0.00	0.00	31.08	2.69
8867	9976	6.764308	ACATGAAGTCCACCATCTTAATTG	57.236	37.500	0.00	0.00	0.00	2.32
8893	10002	4.994852	CGGTTCTGAAGTGAACAATTCCTA	59.005	41.667	11.43	0.00	45.74	2.94
8930	10045	8.025445	GCTTGTTATGATTTCTCTGATGTTGTT	58.975	33.333	0.00	0.00	0.00	2.83
8944	10060	3.057969	TGTTGTTGTCCAGCTATGAGG	57.942	47.619	0.00	0.00	0.00	3.86
8961	10077	3.554934	TGAGGAACTGCAACATGAAACT	58.445	40.909	0.00	0.00	41.55	2.66
8962	10078	3.316029	TGAGGAACTGCAACATGAAACTG	59.684	43.478	0.00	0.00	41.55	3.16
8963	10079	3.290710	AGGAACTGCAACATGAAACTGT	58.709	40.909	0.00	0.00	37.18	3.55
8964	10080	3.701040	AGGAACTGCAACATGAAACTGTT	59.299	39.130	0.00	4.27	37.23	3.16
8984	10100	6.952773	TGTTGGATAAACAGCAACTACTTT	57.047	33.333	0.00	0.00	43.96	2.66
8985	10101	7.341445	TGTTGGATAAACAGCAACTACTTTT	57.659	32.000	0.00	0.00	43.96	2.27
8986	10102	7.422399	TGTTGGATAAACAGCAACTACTTTTC	58.578	34.615	0.00	0.00	43.96	2.29
8987	10103	6.569179	TGGATAAACAGCAACTACTTTTCC	57.431	37.500	0.00	0.00	0.00	3.13
8988	10104	6.303839	TGGATAAACAGCAACTACTTTTCCT	58.696	36.000	0.00	0.00	0.00	3.36
8989	10105	6.206634	TGGATAAACAGCAACTACTTTTCCTG	59.793	38.462	0.00	0.00	0.00	3.86
8990	10106	6.430000	GGATAAACAGCAACTACTTTTCCTGA	59.570	38.462	0.00	0.00	0.00	3.86
8991	10107	5.757850	AAACAGCAACTACTTTTCCTGAG	57.242	39.130	0.00	0.00	0.00	3.35
8992	10108	3.744660	ACAGCAACTACTTTTCCTGAGG	58.255	45.455	0.00	0.00	0.00	3.86
8993	10109	3.077359	CAGCAACTACTTTTCCTGAGGG	58.923	50.000	0.00	0.00	0.00	4.30
8994	10110	2.711547	AGCAACTACTTTTCCTGAGGGT	59.288	45.455	0.00	0.00	0.00	4.34
8995	10111	3.075148	GCAACTACTTTTCCTGAGGGTC	58.925	50.000	0.00	0.00	0.00	4.46
8996	10112	3.496160	GCAACTACTTTTCCTGAGGGTCA	60.496	47.826	0.00	0.00	0.00	4.02
8997	10113	4.714632	CAACTACTTTTCCTGAGGGTCAA	58.285	43.478	0.00	0.00	0.00	3.18
8998	10114	5.130350	CAACTACTTTTCCTGAGGGTCAAA	58.870	41.667	0.00	0.00	0.00	2.69
8999	10115	4.974399	ACTACTTTTCCTGAGGGTCAAAG	58.026	43.478	13.72	13.72	38.61	2.77
9000	10116	3.229697	ACTTTTCCTGAGGGTCAAAGG	57.770	47.619	17.39	7.41	37.81	3.11
9001	10117	2.514160	ACTTTTCCTGAGGGTCAAAGGT	59.486	45.455	17.39	7.92	37.81	3.50
9002	10118	2.951229	TTTCCTGAGGGTCAAAGGTC	57.049	50.000	0.00	0.00	32.59	3.85
9003	10119	1.814429	TTCCTGAGGGTCAAAGGTCA	58.186	50.000	0.00	0.00	32.59	4.02
9004	10120	2.044793	TCCTGAGGGTCAAAGGTCAT	57.955	50.000	0.00	0.00	32.59	3.06
9005	10121	2.348472	TCCTGAGGGTCAAAGGTCATT	58.652	47.619	0.00	0.00	32.59	2.57
9006	10122	3.526899	TCCTGAGGGTCAAAGGTCATTA	58.473	45.455	0.00	0.00	32.59	1.90
9007	10123	3.263425	TCCTGAGGGTCAAAGGTCATTAC	59.737	47.826	0.00	0.00	32.59	1.89
9008	10124	3.009033	CCTGAGGGTCAAAGGTCATTACA	59.991	47.826	0.00	0.00	0.00	2.41
9009	10125	4.324563	CCTGAGGGTCAAAGGTCATTACAT	60.325	45.833	0.00	0.00	0.00	2.29
9010	10126	5.104527	CCTGAGGGTCAAAGGTCATTACATA	60.105	44.000	0.00	0.00	0.00	2.29
9011	10127	6.409695	CCTGAGGGTCAAAGGTCATTACATAT	60.410	42.308	0.00	0.00	0.00	1.78
9012	10128	7.202093	CCTGAGGGTCAAAGGTCATTACATATA	60.202	40.741	0.00	0.00	0.00	0.86
9013	10129	7.506114	TGAGGGTCAAAGGTCATTACATATAC	58.494	38.462	0.00	0.00	0.00	1.47
9014	10130	7.126573	TGAGGGTCAAAGGTCATTACATATACA	59.873	37.037	0.00	0.00	0.00	2.29
9015	10131	8.045720	AGGGTCAAAGGTCATTACATATACAT	57.954	34.615	0.00	0.00	0.00	2.29
9016	10132	7.939039	AGGGTCAAAGGTCATTACATATACATG	59.061	37.037	0.00	0.00	38.21	3.21
9018	10134	8.559536	GGTCAAAGGTCATTACATATACATGTG	58.440	37.037	9.11	0.00	45.17	3.21
9019	10135	9.109393	GTCAAAGGTCATTACATATACATGTGT	57.891	33.333	9.11	4.04	45.17	3.72
9020	10136	9.108284	TCAAAGGTCATTACATATACATGTGTG	57.892	33.333	9.11	7.35	45.17	3.82
9021	10137	9.108284	CAAAGGTCATTACATATACATGTGTGA	57.892	33.333	9.11	0.00	45.17	3.58
9022	10138	9.851686	AAAGGTCATTACATATACATGTGTGAT	57.148	29.630	9.11	0.00	45.17	3.06
9030	10146	9.606631	TTACATATACATGTGTGATAAAGTGCA	57.393	29.630	9.11	0.00	45.17	4.57
9031	10147	8.146479	ACATATACATGTGTGATAAAGTGCAG	57.854	34.615	9.11	0.00	43.89	4.41
9032	10148	7.986889	ACATATACATGTGTGATAAAGTGCAGA	59.013	33.333	9.11	0.00	43.89	4.26
9033	10149	8.829612	CATATACATGTGTGATAAAGTGCAGAA	58.170	33.333	9.11	0.00	0.00	3.02
9034	10150	7.686438	ATACATGTGTGATAAAGTGCAGAAA	57.314	32.000	9.11	0.00	0.00	2.52
9035	10151	6.389830	ACATGTGTGATAAAGTGCAGAAAA	57.610	33.333	0.00	0.00	0.00	2.29
9036	10152	6.208644	ACATGTGTGATAAAGTGCAGAAAAC	58.791	36.000	0.00	0.00	0.00	2.43
9037	10153	5.181690	TGTGTGATAAAGTGCAGAAAACC	57.818	39.130	0.00	0.00	0.00	3.27
9038	10154	4.037446	TGTGTGATAAAGTGCAGAAAACCC	59.963	41.667	0.00	0.00	0.00	4.11
9039	10155	3.572255	TGTGATAAAGTGCAGAAAACCCC	59.428	43.478	0.00	0.00	0.00	4.95
9040	10156	3.826729	GTGATAAAGTGCAGAAAACCCCT	59.173	43.478	0.00	0.00	0.00	4.79
9041	10157	4.280929	GTGATAAAGTGCAGAAAACCCCTT	59.719	41.667	0.00	0.00	0.00	3.95
9042	10158	5.475564	GTGATAAAGTGCAGAAAACCCCTTA	59.524	40.000	0.00	0.00	0.00	2.69
9043	10159	6.152831	GTGATAAAGTGCAGAAAACCCCTTAT	59.847	38.462	0.00	0.00	0.00	1.73
9044	10160	7.338449	GTGATAAAGTGCAGAAAACCCCTTATA	59.662	37.037	0.00	0.00	0.00	0.98
9045	10161	5.977489	AAAGTGCAGAAAACCCCTTATAC	57.023	39.130	0.00	0.00	0.00	1.47
9046	10162	4.650972	AGTGCAGAAAACCCCTTATACA	57.349	40.909	0.00	0.00	0.00	2.29
9047	10163	4.993028	AGTGCAGAAAACCCCTTATACAA	58.007	39.130	0.00	0.00	0.00	2.41
9048	10164	4.765339	AGTGCAGAAAACCCCTTATACAAC	59.235	41.667	0.00	0.00	0.00	3.32
9049	10165	3.754323	TGCAGAAAACCCCTTATACAACG	59.246	43.478	0.00	0.00	0.00	4.10
9050	10166	3.128068	GCAGAAAACCCCTTATACAACGG	59.872	47.826	0.00	0.00	0.00	4.44
9051	10167	3.692593	CAGAAAACCCCTTATACAACGGG	59.307	47.826	0.00	0.00	41.71	5.28
9059	10175	5.349061	CCCTTATACAACGGGGATATACC	57.651	47.826	0.00	0.00	41.25	2.73
9083	10199	7.653767	CGAAAGGGGATTATACACATCTAAC	57.346	40.000	0.00	0.00	0.00	2.34
9084	10200	7.214381	CGAAAGGGGATTATACACATCTAACA	58.786	38.462	0.00	0.00	0.00	2.41
9085	10201	7.170998	CGAAAGGGGATTATACACATCTAACAC	59.829	40.741	0.00	0.00	0.00	3.32
9086	10202	6.435292	AGGGGATTATACACATCTAACACC	57.565	41.667	0.00	0.00	0.00	4.16
9087	10203	5.309806	AGGGGATTATACACATCTAACACCC	59.690	44.000	0.00	0.00	0.00	4.61
9088	10204	5.514310	GGGGATTATACACATCTAACACCCC	60.514	48.000	0.00	0.00	38.54	4.95
9089	10205	5.514310	GGGATTATACACATCTAACACCCCC	60.514	48.000	0.00	0.00	0.00	5.40
9090	10206	5.309806	GGATTATACACATCTAACACCCCCT	59.690	44.000	0.00	0.00	0.00	4.79
9091	10207	5.881923	TTATACACATCTAACACCCCCTC	57.118	43.478	0.00	0.00	0.00	4.30
9092	10208	2.344093	ACACATCTAACACCCCCTCT	57.656	50.000	0.00	0.00	0.00	3.69
9093	10209	2.188817	ACACATCTAACACCCCCTCTC	58.811	52.381	0.00	0.00	0.00	3.20
9094	10210	2.187958	CACATCTAACACCCCCTCTCA	58.812	52.381	0.00	0.00	0.00	3.27
9095	10211	2.571653	CACATCTAACACCCCCTCTCAA	59.428	50.000	0.00	0.00	0.00	3.02
9096	10212	3.009033	CACATCTAACACCCCCTCTCAAA	59.991	47.826	0.00	0.00	0.00	2.69
9097	10213	3.009143	ACATCTAACACCCCCTCTCAAAC	59.991	47.826	0.00	0.00	0.00	2.93
9098	10214	2.986050	TCTAACACCCCCTCTCAAACT	58.014	47.619	0.00	0.00	0.00	2.66
9099	10215	2.904434	TCTAACACCCCCTCTCAAACTC	59.096	50.000	0.00	0.00	0.00	3.01
9100	10216	1.518367	AACACCCCCTCTCAAACTCA	58.482	50.000	0.00	0.00	0.00	3.41
9101	10217	1.747444	ACACCCCCTCTCAAACTCAT	58.253	50.000	0.00	0.00	0.00	2.90
9102	10218	1.352352	ACACCCCCTCTCAAACTCATG	59.648	52.381	0.00	0.00	0.00	3.07
9103	10219	0.995024	ACCCCCTCTCAAACTCATGG	59.005	55.000	0.00	0.00	0.00	3.66
9104	10220	0.995024	CCCCCTCTCAAACTCATGGT	59.005	55.000	0.00	0.00	0.00	3.55
9105	10221	1.340405	CCCCCTCTCAAACTCATGGTG	60.340	57.143	0.00	0.00	0.00	4.17
9106	10222	1.340405	CCCCTCTCAAACTCATGGTGG	60.340	57.143	0.00	0.00	0.00	4.61
9107	10223	1.630369	CCCTCTCAAACTCATGGTGGA	59.370	52.381	0.00	0.00	0.00	4.02
9108	10224	2.240667	CCCTCTCAAACTCATGGTGGAT	59.759	50.000	0.00	0.00	0.00	3.41
9109	10225	3.455910	CCCTCTCAAACTCATGGTGGATA	59.544	47.826	0.00	0.00	0.00	2.59
9110	10226	4.080356	CCCTCTCAAACTCATGGTGGATAA	60.080	45.833	0.00	0.00	0.00	1.75
9111	10227	4.878397	CCTCTCAAACTCATGGTGGATAAC	59.122	45.833	0.00	0.00	0.00	1.89
9112	10228	5.491070	CTCTCAAACTCATGGTGGATAACA	58.509	41.667	0.00	0.00	0.00	2.41
9113	10229	5.875224	TCTCAAACTCATGGTGGATAACAA	58.125	37.500	0.00	0.00	0.00	2.83
9114	10230	5.705441	TCTCAAACTCATGGTGGATAACAAC	59.295	40.000	0.00	0.00	37.28	3.32
9122	10238	4.431416	TGGTGGATAACAACACTGAGTT	57.569	40.909	0.00	0.00	43.22	3.01
9123	10239	4.787551	TGGTGGATAACAACACTGAGTTT	58.212	39.130	0.00	0.00	43.22	2.66
9124	10240	4.578516	TGGTGGATAACAACACTGAGTTTG	59.421	41.667	6.14	6.14	43.22	2.93
9125	10241	4.023193	GGTGGATAACAACACTGAGTTTGG	60.023	45.833	10.61	0.00	38.74	3.28
9126	10242	4.819630	GTGGATAACAACACTGAGTTTGGA	59.180	41.667	10.61	1.86	38.74	3.53
9127	10243	5.049405	GTGGATAACAACACTGAGTTTGGAG	60.049	44.000	10.61	0.00	38.74	3.86
9128	10244	5.163248	TGGATAACAACACTGAGTTTGGAGA	60.163	40.000	10.61	0.00	38.74	3.71
9129	10245	5.409826	GGATAACAACACTGAGTTTGGAGAG	59.590	44.000	10.61	0.00	38.74	3.20
9130	10246	3.199880	ACAACACTGAGTTTGGAGAGG	57.800	47.619	10.61	0.00	38.74	3.69
9131	10247	2.771943	ACAACACTGAGTTTGGAGAGGA	59.228	45.455	10.61	0.00	38.74	3.71
9132	10248	3.199946	ACAACACTGAGTTTGGAGAGGAA	59.800	43.478	10.61	0.00	38.74	3.36
9133	10249	4.199310	CAACACTGAGTTTGGAGAGGAAA	58.801	43.478	0.00	0.00	38.74	3.13
9134	10250	4.503714	ACACTGAGTTTGGAGAGGAAAA	57.496	40.909	0.00	0.00	0.00	2.29
9135	10251	4.855340	ACACTGAGTTTGGAGAGGAAAAA	58.145	39.130	0.00	0.00	0.00	1.94
9136	10252	4.884164	ACACTGAGTTTGGAGAGGAAAAAG	59.116	41.667	0.00	0.00	0.00	2.27
9137	10253	4.276926	CACTGAGTTTGGAGAGGAAAAAGG	59.723	45.833	0.00	0.00	0.00	3.11
9138	10254	4.079730	ACTGAGTTTGGAGAGGAAAAAGGT	60.080	41.667	0.00	0.00	0.00	3.50
9139	10255	5.132144	ACTGAGTTTGGAGAGGAAAAAGGTA	59.868	40.000	0.00	0.00	0.00	3.08
9140	10256	6.183361	ACTGAGTTTGGAGAGGAAAAAGGTAT	60.183	38.462	0.00	0.00	0.00	2.73
9141	10257	6.003950	TGAGTTTGGAGAGGAAAAAGGTATG	58.996	40.000	0.00	0.00	0.00	2.39
9142	10258	4.767409	AGTTTGGAGAGGAAAAAGGTATGC	59.233	41.667	0.00	0.00	0.00	3.14
9143	10259	4.657814	TTGGAGAGGAAAAAGGTATGCT	57.342	40.909	0.00	0.00	0.00	3.79
9144	10260	3.955471	TGGAGAGGAAAAAGGTATGCTG	58.045	45.455	0.00	0.00	0.00	4.41
9145	10261	2.685388	GGAGAGGAAAAAGGTATGCTGC	59.315	50.000	0.00	0.00	0.00	5.25
9146	10262	2.352960	GAGAGGAAAAAGGTATGCTGCG	59.647	50.000	0.00	0.00	0.00	5.18
9147	10263	0.811281	AGGAAAAAGGTATGCTGCGC	59.189	50.000	0.00	0.00	0.00	6.09
9148	10264	0.811281	GGAAAAAGGTATGCTGCGCT	59.189	50.000	9.73	0.00	0.00	5.92
9149	10265	1.202188	GGAAAAAGGTATGCTGCGCTC	60.202	52.381	9.73	0.28	0.00	5.03
9150	10266	0.447801	AAAAAGGTATGCTGCGCTCG	59.552	50.000	9.73	0.00	0.00	5.03
9151	10267	0.391130	AAAAGGTATGCTGCGCTCGA	60.391	50.000	9.73	0.00	0.00	4.04
9152	10268	0.807667	AAAGGTATGCTGCGCTCGAG	60.808	55.000	9.73	8.45	0.00	4.04
9153	10269	1.949847	AAGGTATGCTGCGCTCGAGT	61.950	55.000	15.13	0.00	0.00	4.18
9154	10270	1.946650	GGTATGCTGCGCTCGAGTC	60.947	63.158	15.13	7.08	0.00	3.36
9155	10271	1.064946	GTATGCTGCGCTCGAGTCT	59.935	57.895	15.13	0.00	0.00	3.24
9156	10272	1.064783	TATGCTGCGCTCGAGTCTG	59.935	57.895	15.13	11.10	0.00	3.51
9157	10273	1.657751	TATGCTGCGCTCGAGTCTGT	61.658	55.000	15.13	0.00	0.00	3.41
9158	10274	3.177920	GCTGCGCTCGAGTCTGTG	61.178	66.667	15.13	2.50	0.00	3.66
9159	10275	3.177920	CTGCGCTCGAGTCTGTGC	61.178	66.667	15.13	7.66	39.80	4.57
9160	10276	4.724602	TGCGCTCGAGTCTGTGCC	62.725	66.667	15.13	0.00	38.75	5.01
9161	10277	4.427661	GCGCTCGAGTCTGTGCCT	62.428	66.667	15.13	0.00	34.05	4.75
9162	10278	2.259818	CGCTCGAGTCTGTGCCTT	59.740	61.111	15.13	0.00	0.00	4.35
9163	10279	1.803519	CGCTCGAGTCTGTGCCTTC	60.804	63.158	15.13	0.00	0.00	3.46
9164	10280	1.803519	GCTCGAGTCTGTGCCTTCG	60.804	63.158	15.13	0.00	34.56	3.79
9165	10281	1.581954	CTCGAGTCTGTGCCTTCGT	59.418	57.895	3.62	0.00	34.83	3.85
9166	10282	0.730834	CTCGAGTCTGTGCCTTCGTG	60.731	60.000	3.62	0.00	34.83	4.35
9167	10283	1.170290	TCGAGTCTGTGCCTTCGTGA	61.170	55.000	0.00	0.00	34.83	4.35
9168	10284	0.318699	CGAGTCTGTGCCTTCGTGAA	60.319	55.000	0.00	0.00	0.00	3.18
9169	10285	1.423395	GAGTCTGTGCCTTCGTGAAG	58.577	55.000	2.57	2.57	38.14	3.02
9170	10286	1.000163	GAGTCTGTGCCTTCGTGAAGA	60.000	52.381	11.11	0.00	40.79	2.87
9171	10287	1.412710	AGTCTGTGCCTTCGTGAAGAA	59.587	47.619	11.11	0.00	40.79	2.52
9172	10288	1.527311	GTCTGTGCCTTCGTGAAGAAC	59.473	52.381	11.11	9.21	40.79	3.01
9173	10289	1.412710	TCTGTGCCTTCGTGAAGAACT	59.587	47.619	11.11	0.00	40.79	3.01
9174	10290	1.795286	CTGTGCCTTCGTGAAGAACTC	59.205	52.381	11.11	4.88	40.79	3.01
9175	10291	1.138069	TGTGCCTTCGTGAAGAACTCA	59.862	47.619	11.11	7.10	40.79	3.41
9176	10292	1.795286	GTGCCTTCGTGAAGAACTCAG	59.205	52.381	11.11	0.00	40.79	3.35
9177	10293	0.793250	GCCTTCGTGAAGAACTCAGC	59.207	55.000	11.11	1.39	40.79	4.26
9178	10294	1.433534	CCTTCGTGAAGAACTCAGCC	58.566	55.000	11.11	0.00	40.79	4.85
9179	10295	1.270305	CCTTCGTGAAGAACTCAGCCA	60.270	52.381	11.11	0.00	40.79	4.75
9180	10296	2.483876	CTTCGTGAAGAACTCAGCCAA	58.516	47.619	3.49	0.00	40.79	4.52
9181	10297	1.865865	TCGTGAAGAACTCAGCCAAC	58.134	50.000	0.00	0.00	33.60	3.77
9182	10298	1.412710	TCGTGAAGAACTCAGCCAACT	59.587	47.619	0.00	0.00	33.60	3.16
9183	10299	1.528586	CGTGAAGAACTCAGCCAACTG	59.471	52.381	0.00	0.00	45.95	3.16
9184	10300	2.565841	GTGAAGAACTCAGCCAACTGT	58.434	47.619	0.00	0.00	44.77	3.55
9185	10301	3.728845	GTGAAGAACTCAGCCAACTGTA	58.271	45.455	0.00	0.00	44.77	2.74
9186	10302	4.127171	GTGAAGAACTCAGCCAACTGTAA	58.873	43.478	0.00	0.00	44.77	2.41
9187	10303	4.024809	GTGAAGAACTCAGCCAACTGTAAC	60.025	45.833	0.00	0.00	44.77	2.50
9188	10304	4.141711	TGAAGAACTCAGCCAACTGTAACT	60.142	41.667	0.00	0.00	44.77	2.24
9189	10305	3.996480	AGAACTCAGCCAACTGTAACTC	58.004	45.455	0.00	0.00	44.77	3.01
9190	10306	3.388024	AGAACTCAGCCAACTGTAACTCA	59.612	43.478	0.00	0.00	44.77	3.41
9192	10308	2.965831	ACTCAGCCAACTGTAACTCAGA	59.034	45.455	1.79	0.00	46.27	3.27
9193	10309	3.006323	ACTCAGCCAACTGTAACTCAGAG	59.994	47.826	0.00	0.00	46.27	3.35
9194	10310	2.300152	TCAGCCAACTGTAACTCAGAGG	59.700	50.000	1.53	4.73	46.27	3.69
9195	10311	1.625818	AGCCAACTGTAACTCAGAGGG	59.374	52.381	1.53	4.10	46.27	4.30
9196	10312	2.100605	CCAACTGTAACTCAGAGGGC	57.899	55.000	1.53	0.00	46.27	5.19
9197	10313	1.347707	CCAACTGTAACTCAGAGGGCA	59.652	52.381	1.53	0.00	46.27	5.36
9198	10314	2.417719	CAACTGTAACTCAGAGGGCAC	58.582	52.381	1.53	0.00	46.27	5.01
9199	10315	1.717032	ACTGTAACTCAGAGGGCACA	58.283	50.000	1.53	1.94	46.27	4.57
9200	10316	2.260822	ACTGTAACTCAGAGGGCACAT	58.739	47.619	1.53	0.00	46.27	3.21
9201	10317	3.441101	ACTGTAACTCAGAGGGCACATA	58.559	45.455	1.53	0.00	46.27	2.29
9202	10318	3.449018	ACTGTAACTCAGAGGGCACATAG	59.551	47.826	1.53	0.00	46.27	2.23
9203	10319	3.441101	TGTAACTCAGAGGGCACATAGT	58.559	45.455	1.53	0.00	0.00	2.12
9204	10320	3.195610	TGTAACTCAGAGGGCACATAGTG	59.804	47.826	1.53	0.00	36.51	2.74
9205	10321	2.238084	ACTCAGAGGGCACATAGTGA	57.762	50.000	1.53	0.00	35.23	3.41
9206	10322	2.540383	ACTCAGAGGGCACATAGTGAA	58.460	47.619	1.53	0.00	35.23	3.18
9207	10323	2.499289	ACTCAGAGGGCACATAGTGAAG	59.501	50.000	1.53	0.00	35.23	3.02
9208	10324	2.762887	CTCAGAGGGCACATAGTGAAGA	59.237	50.000	0.58	0.00	35.23	2.87
9209	10325	2.762887	TCAGAGGGCACATAGTGAAGAG	59.237	50.000	0.58	0.00	35.23	2.85
9210	10326	1.484240	AGAGGGCACATAGTGAAGAGC	59.516	52.381	0.58	0.00	35.23	4.09
9211	10327	0.176680	AGGGCACATAGTGAAGAGCG	59.823	55.000	0.58	0.00	35.23	5.03

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
11	12	1.894756	CTCCTCTCTCCGGGCGTAG	60.895	68.421	0.00	0.00	0.00	3.51
12	13	2.192443	CTCCTCTCTCCGGGCGTA	59.808	66.667	0.00	0.00	0.00	4.42
15	16	3.077556	TTGCTCCTCTCTCCGGGC	61.078	66.667	0.00	0.00	0.00	6.13
16	17	3.087666	GCTTGCTCCTCTCTCCGGG	62.088	68.421	0.00	0.00	0.00	5.73
17	18	2.498726	GCTTGCTCCTCTCTCCGG	59.501	66.667	0.00	0.00	0.00	5.14
18	19	2.103934	CGCTTGCTCCTCTCTCCG	59.896	66.667	0.00	0.00	0.00	4.63
19	20	2.202864	GCGCTTGCTCCTCTCTCC	60.203	66.667	0.00	0.00	35.07	3.71
74	75	3.781770	GAGGGAGAGATGCACGGCG	62.782	68.421	4.80	4.80	0.00	6.46
93	94	2.158943	GGTCTAGGAATCGGAAACAGGG	60.159	54.545	0.00	0.00	0.00	4.45
94	95	2.766828	AGGTCTAGGAATCGGAAACAGG	59.233	50.000	0.00	0.00	0.00	4.00
95	96	4.500035	GCTAGGTCTAGGAATCGGAAACAG	60.500	50.000	7.08	0.00	33.87	3.16
420	422	3.937814	TCATAGGCGGTGGCATTTATAG	58.062	45.455	0.00	0.00	42.47	1.31
445	447	7.344612	TCAGTGAATGGCTTCTACTCCTTATAA	59.655	37.037	0.00	0.00	32.29	0.98
622	624	3.170991	ACCCTCTCAACACTAGCAGTA	57.829	47.619	0.00	0.00	0.00	2.74
649	651	7.011389	AGCGAATTCTTCACATATTTCATCGAA	59.989	33.333	3.52	0.00	0.00	3.71
705	707	4.024387	TCAACGAATGTAACCAAGCACTTC	60.024	41.667	0.00	0.00	0.00	3.01
708	711	3.496884	TCTCAACGAATGTAACCAAGCAC	59.503	43.478	0.00	0.00	0.00	4.40
744	748	5.233083	TGACATCCTCATCTTTCACTTGT	57.767	39.130	0.00	0.00	0.00	3.16
902	908	8.028938	AGAACAAATGTACAATAAGATGGCAAC	58.971	33.333	0.00	0.00	0.00	4.17
953	962	6.245408	TGCTACTTGGTATTCCTGTCAAATT	58.755	36.000	0.00	0.00	34.23	1.82
954	963	5.815581	TGCTACTTGGTATTCCTGTCAAAT	58.184	37.500	0.00	0.00	34.23	2.32
970	979	2.728007	GGAGCCAGGAATTTGCTACTT	58.272	47.619	0.00	0.00	34.99	2.24
1011	1024	1.241990	CGTCGAGGTCAAGTCTCCCA	61.242	60.000	0.00	0.00	0.00	4.37
1206	1219	6.535508	GTGGGATCAGTTCATTAAGTCTACAC	59.464	42.308	0.00	0.00	0.00	2.90
1618	1631	9.725019	AGTTACATCACTGAAAATGAATAGTCA	57.275	29.630	0.00	0.00	38.41	3.41
1754	1767	4.631813	ACCAAGCGAGAGAATGTTGTTATC	59.368	41.667	0.00	0.00	0.00	1.75
1811	1824	6.296026	TGCTGAGTTTAGTAAGGTGAACATT	58.704	36.000	0.00	0.00	0.00	2.71
1958	1971	0.669077	GTCATCACGGTATCCTCGCT	59.331	55.000	0.00	0.00	0.00	4.93
2063	2076	2.224378	CCAGGTGTTCTTGAGCTTCTCA	60.224	50.000	0.00	0.00	38.87	3.27
2283	2297	0.179043	CATCAGGAGATGCAGCAGCT	60.179	55.000	14.45	14.45	44.61	4.24
2416	2430	9.739276	TTAAAGTCAGGTCAGTGAAATATGAAT	57.261	29.630	0.00	0.00	0.00	2.57
2507	2521	3.325753	ACAGGAGCAGGTGAGGGC	61.326	66.667	0.00	0.00	0.00	5.19
2653	2667	1.993370	GACCACGGATCGAAGAAACAG	59.007	52.381	0.00	0.00	43.58	3.16
2820	2834	6.441088	AAACACTAGGACAGAAGGAATTCT	57.559	37.500	5.23	0.00	0.00	2.40
2986	3001	5.661458	TCCTTCTTTTTGTAGGAGCTATCG	58.339	41.667	0.00	0.00	37.33	2.92
3297	3315	5.481824	ACAATAGATGTCTCTCAACTGGACA	59.518	40.000	0.00	0.00	37.96	4.02
3301	3319	7.199766	GGAGTACAATAGATGTCTCTCAACTG	58.800	42.308	0.00	0.00	42.70	3.16
3353	3406	3.807622	CGATCAATAATAAGTGCCGTGGT	59.192	43.478	0.00	0.00	0.00	4.16
3357	3410	3.679980	CCTCCGATCAATAATAAGTGCCG	59.320	47.826	0.00	0.00	0.00	5.69
3359	3412	3.437049	GCCCTCCGATCAATAATAAGTGC	59.563	47.826	0.00	0.00	0.00	4.40
3370	3423	4.312443	GAAAATATTACGCCCTCCGATCA	58.688	43.478	0.00	0.00	41.02	2.92
3404	3457	1.338136	CCAGCCTACCAGGATCCGTT	61.338	60.000	5.98	0.00	37.67	4.44
3405	3458	1.762460	CCAGCCTACCAGGATCCGT	60.762	63.158	5.98	1.38	37.67	4.69
3417	3470	6.552350	AGCATTTAATTCATTATGTCCAGCCT	59.448	34.615	0.00	0.00	0.00	4.58
3821	3879	3.005684	AGCAGAACATCGCCAAAATGAAA	59.994	39.130	0.00	0.00	0.00	2.69
3851	3909	7.072030	GTGATGCTTGTTTTAGTCACAACTAG	58.928	38.462	0.00	0.00	39.14	2.57
3879	3937	3.135712	GGGGATGGTTCACAAAAGGTTTT	59.864	43.478	0.00	0.00	0.00	2.43
4255	4325	2.158449	CAGAAAGATCGCAGGTTCACAC	59.842	50.000	0.00	0.00	0.00	3.82
4391	4462	1.401552	GCGGTTTGATGCTTGCTATCA	59.598	47.619	0.00	0.00	33.00	2.15
4478	4553	9.262358	GAACAGAAGGAGGATGTATTATGTAAC	57.738	37.037	0.00	0.00	0.00	2.50
4491	4569	6.389869	ACATATATTTGGGAACAGAAGGAGGA	59.610	38.462	0.00	0.00	44.54	3.71
4492	4570	6.605119	ACATATATTTGGGAACAGAAGGAGG	58.395	40.000	0.00	0.00	44.54	4.30
4493	4571	7.512992	AGACATATATTTGGGAACAGAAGGAG	58.487	38.462	0.00	0.00	44.54	3.69
4494	4572	7.451731	AGACATATATTTGGGAACAGAAGGA	57.548	36.000	0.00	0.00	44.54	3.36
4495	4573	8.525290	AAAGACATATATTTGGGAACAGAAGG	57.475	34.615	0.00	0.00	44.54	3.46
4513	4591	9.136323	ACCTTGTTGAAATCTCTAAAAAGACAT	57.864	29.630	0.00	0.00	0.00	3.06
4514	4592	8.519799	ACCTTGTTGAAATCTCTAAAAAGACA	57.480	30.769	0.00	0.00	0.00	3.41
4515	4593	9.880064	GTACCTTGTTGAAATCTCTAAAAAGAC	57.120	33.333	0.00	0.00	0.00	3.01
4516	4594	9.847224	AGTACCTTGTTGAAATCTCTAAAAAGA	57.153	29.630	0.00	0.00	0.00	2.52
4523	4601	7.974501	CGTATGTAGTACCTTGTTGAAATCTCT	59.025	37.037	0.00	0.00	0.00	3.10
4524	4602	7.222224	CCGTATGTAGTACCTTGTTGAAATCTC	59.778	40.741	0.00	0.00	0.00	2.75
4525	4603	7.039882	CCGTATGTAGTACCTTGTTGAAATCT	58.960	38.462	0.00	0.00	0.00	2.40
4526	4604	7.037438	TCCGTATGTAGTACCTTGTTGAAATC	58.963	38.462	0.00	0.00	0.00	2.17
4527	4605	6.938507	TCCGTATGTAGTACCTTGTTGAAAT	58.061	36.000	0.00	0.00	0.00	2.17
4528	4606	6.343716	TCCGTATGTAGTACCTTGTTGAAA	57.656	37.500	0.00	0.00	0.00	2.69
4529	4607	5.622914	GCTCCGTATGTAGTACCTTGTTGAA	60.623	44.000	0.00	0.00	0.00	2.69
4530	4608	4.142315	GCTCCGTATGTAGTACCTTGTTGA	60.142	45.833	0.00	0.00	0.00	3.18
4531	4609	4.110482	GCTCCGTATGTAGTACCTTGTTG	58.890	47.826	0.00	0.00	0.00	3.33
4532	4610	3.765511	TGCTCCGTATGTAGTACCTTGTT	59.234	43.478	0.00	0.00	0.00	2.83
4533	4611	3.359033	TGCTCCGTATGTAGTACCTTGT	58.641	45.455	0.00	0.00	0.00	3.16
4534	4612	4.380841	TTGCTCCGTATGTAGTACCTTG	57.619	45.455	0.00	0.00	0.00	3.61
4535	4613	5.410355	TTTTGCTCCGTATGTAGTACCTT	57.590	39.130	0.00	0.00	0.00	3.50
4536	4614	5.128171	TCATTTTGCTCCGTATGTAGTACCT	59.872	40.000	0.00	0.00	0.00	3.08
4537	4615	5.353938	TCATTTTGCTCCGTATGTAGTACC	58.646	41.667	0.00	0.00	0.00	3.34
4538	4616	5.462398	CCTCATTTTGCTCCGTATGTAGTAC	59.538	44.000	0.00	0.00	0.00	2.73
4539	4617	5.452776	CCCTCATTTTGCTCCGTATGTAGTA	60.453	44.000	0.00	0.00	0.00	1.82
4540	4618	4.442706	CCTCATTTTGCTCCGTATGTAGT	58.557	43.478	0.00	0.00	0.00	2.73
4541	4619	3.809832	CCCTCATTTTGCTCCGTATGTAG	59.190	47.826	0.00	0.00	0.00	2.74
4542	4620	3.452990	TCCCTCATTTTGCTCCGTATGTA	59.547	43.478	0.00	0.00	0.00	2.29
4543	4621	2.238646	TCCCTCATTTTGCTCCGTATGT	59.761	45.455	0.00	0.00	0.00	2.29
4544	4622	2.917933	TCCCTCATTTTGCTCCGTATG	58.082	47.619	0.00	0.00	0.00	2.39
4545	4623	3.644966	TTCCCTCATTTTGCTCCGTAT	57.355	42.857	0.00	0.00	0.00	3.06
4546	4624	3.199946	AGATTCCCTCATTTTGCTCCGTA	59.800	43.478	0.00	0.00	0.00	4.02
4547	4625	2.025887	AGATTCCCTCATTTTGCTCCGT	60.026	45.455	0.00	0.00	0.00	4.69
4548	4626	2.648059	AGATTCCCTCATTTTGCTCCG	58.352	47.619	0.00	0.00	0.00	4.63
4549	4627	4.336713	GTGTAGATTCCCTCATTTTGCTCC	59.663	45.833	0.00	0.00	0.00	4.70
4550	4628	5.189180	AGTGTAGATTCCCTCATTTTGCTC	58.811	41.667	0.00	0.00	0.00	4.26
4551	4629	5.045286	AGAGTGTAGATTCCCTCATTTTGCT	60.045	40.000	0.00	0.00	0.00	3.91
4552	4630	5.189180	AGAGTGTAGATTCCCTCATTTTGC	58.811	41.667	0.00	0.00	0.00	3.68
4553	4631	8.792830	TTTAGAGTGTAGATTCCCTCATTTTG	57.207	34.615	0.00	0.00	0.00	2.44
4554	4632	9.981460	ATTTTAGAGTGTAGATTCCCTCATTTT	57.019	29.630	0.00	0.00	0.00	1.82
4558	4636	9.213777	ACATATTTTAGAGTGTAGATTCCCTCA	57.786	33.333	0.00	0.00	0.00	3.86
4559	4637	9.699703	GACATATTTTAGAGTGTAGATTCCCTC	57.300	37.037	0.00	0.00	0.00	4.30
4560	4638	9.440761	AGACATATTTTAGAGTGTAGATTCCCT	57.559	33.333	0.00	0.00	0.00	4.20
4582	4660	9.955102	ACTAGAACATACGGATGTATATAGACA	57.045	33.333	23.47	2.07	45.93	3.41
4584	4662	9.610705	GGACTAGAACATACGGATGTATATAGA	57.389	37.037	23.47	5.94	45.93	1.98
4585	4663	9.392259	TGGACTAGAACATACGGATGTATATAG	57.608	37.037	15.10	17.27	45.93	1.31
4586	4664	9.916360	ATGGACTAGAACATACGGATGTATATA	57.084	33.333	15.10	6.52	45.93	0.86
4587	4665	8.824756	ATGGACTAGAACATACGGATGTATAT	57.175	34.615	15.10	5.62	45.93	0.86
4588	4666	8.645814	AATGGACTAGAACATACGGATGTATA	57.354	34.615	15.10	9.41	45.93	1.47
4589	4667	7.540474	AATGGACTAGAACATACGGATGTAT	57.460	36.000	15.10	8.68	45.93	2.29
4590	4668	6.971726	AATGGACTAGAACATACGGATGTA	57.028	37.500	15.10	0.00	45.93	2.29
4592	4670	6.280643	TCAAATGGACTAGAACATACGGATG	58.719	40.000	5.94	5.94	39.16	3.51
4593	4671	6.479972	TCAAATGGACTAGAACATACGGAT	57.520	37.500	0.00	0.00	0.00	4.18
4594	4672	5.925506	TCAAATGGACTAGAACATACGGA	57.074	39.130	0.00	0.00	0.00	4.69
4595	4673	6.594159	AGTTTCAAATGGACTAGAACATACGG	59.406	38.462	0.00	0.00	0.00	4.02
4596	4674	7.596749	AGTTTCAAATGGACTAGAACATACG	57.403	36.000	0.00	0.00	0.00	3.06
4597	4675	9.220767	AGAAGTTTCAAATGGACTAGAACATAC	57.779	33.333	0.00	0.00	0.00	2.39
4599	4677	9.793259	TTAGAAGTTTCAAATGGACTAGAACAT	57.207	29.630	0.00	0.00	0.00	2.71
4600	4678	9.621629	TTTAGAAGTTTCAAATGGACTAGAACA	57.378	29.630	0.00	0.00	0.00	3.18
4606	4684	8.966868	TGTCTTTTTAGAAGTTTCAAATGGACT	58.033	29.630	0.00	0.00	0.00	3.85
4607	4685	9.750125	ATGTCTTTTTAGAAGTTTCAAATGGAC	57.250	29.630	0.00	0.00	0.00	4.02
4624	4702	9.338622	CCTCCGTTCCTAAATATATGTCTTTTT	57.661	33.333	0.00	0.00	0.00	1.94
4625	4703	7.937394	CCCTCCGTTCCTAAATATATGTCTTTT	59.063	37.037	0.00	0.00	0.00	2.27
4626	4704	7.291651	TCCCTCCGTTCCTAAATATATGTCTTT	59.708	37.037	0.00	0.00	0.00	2.52
4627	4705	6.785963	TCCCTCCGTTCCTAAATATATGTCTT	59.214	38.462	0.00	0.00	0.00	3.01
4628	4706	6.320518	TCCCTCCGTTCCTAAATATATGTCT	58.679	40.000	0.00	0.00	0.00	3.41
4629	4707	6.210984	ACTCCCTCCGTTCCTAAATATATGTC	59.789	42.308	0.00	0.00	0.00	3.06
4630	4708	6.082707	ACTCCCTCCGTTCCTAAATATATGT	58.917	40.000	0.00	0.00	0.00	2.29
4631	4709	6.607004	ACTCCCTCCGTTCCTAAATATATG	57.393	41.667	0.00	0.00	0.00	1.78
4632	4710	7.477008	ACTACTCCCTCCGTTCCTAAATATAT	58.523	38.462	0.00	0.00	0.00	0.86
4633	4711	6.856757	ACTACTCCCTCCGTTCCTAAATATA	58.143	40.000	0.00	0.00	0.00	0.86
4634	4712	5.713807	ACTACTCCCTCCGTTCCTAAATAT	58.286	41.667	0.00	0.00	0.00	1.28
4635	4713	5.134725	ACTACTCCCTCCGTTCCTAAATA	57.865	43.478	0.00	0.00	0.00	1.40
4636	4714	3.991683	ACTACTCCCTCCGTTCCTAAAT	58.008	45.455	0.00	0.00	0.00	1.40
4637	4715	3.463048	ACTACTCCCTCCGTTCCTAAA	57.537	47.619	0.00	0.00	0.00	1.85
4638	4716	3.686691	GCTACTACTCCCTCCGTTCCTAA	60.687	52.174	0.00	0.00	0.00	2.69
4639	4717	2.158696	GCTACTACTCCCTCCGTTCCTA	60.159	54.545	0.00	0.00	0.00	2.94
4640	4718	1.409942	GCTACTACTCCCTCCGTTCCT	60.410	57.143	0.00	0.00	0.00	3.36
4641	4719	1.031235	GCTACTACTCCCTCCGTTCC	58.969	60.000	0.00	0.00	0.00	3.62
4642	4720	2.055684	AGCTACTACTCCCTCCGTTC	57.944	55.000	0.00	0.00	0.00	3.95
4643	4721	2.158638	CCTAGCTACTACTCCCTCCGTT	60.159	54.545	0.00	0.00	0.00	4.44
4644	4722	1.420891	CCTAGCTACTACTCCCTCCGT	59.579	57.143	0.00	0.00	0.00	4.69
4645	4723	1.420891	ACCTAGCTACTACTCCCTCCG	59.579	57.143	0.00	0.00	0.00	4.63
4646	4724	3.598693	AACCTAGCTACTACTCCCTCC	57.401	52.381	0.00	0.00	0.00	4.30
4647	4725	4.534797	TCAAACCTAGCTACTACTCCCTC	58.465	47.826	0.00	0.00	0.00	4.30
4648	4726	4.604784	TCAAACCTAGCTACTACTCCCT	57.395	45.455	0.00	0.00	0.00	4.20
4649	4727	4.441773	GCTTCAAACCTAGCTACTACTCCC	60.442	50.000	0.00	0.00	34.57	4.30
4650	4728	4.684877	GCTTCAAACCTAGCTACTACTCC	58.315	47.826	0.00	0.00	34.57	3.85
4651	4729	4.096081	TCGCTTCAAACCTAGCTACTACTC	59.904	45.833	0.00	0.00	35.25	2.59
4652	4730	4.015084	TCGCTTCAAACCTAGCTACTACT	58.985	43.478	0.00	0.00	35.25	2.57
4653	4731	4.367386	TCGCTTCAAACCTAGCTACTAC	57.633	45.455	0.00	0.00	35.25	2.73
4737	4822	3.916172	GTGCATGAATGTACTGCAAACAG	59.084	43.478	8.16	0.00	46.51	3.16
4787	4872	3.127030	GGAGGTTTCGTATCTGCCAAAAG	59.873	47.826	0.00	0.00	0.00	2.27
5060	5145	7.867403	ACATATGGACAAGTCACAACATTTTTC	59.133	33.333	7.80	0.00	0.00	2.29
5151	5236	3.503748	ACTTTGCTTCCTCCTTGAAATCG	59.496	43.478	0.00	0.00	0.00	3.34
5222	5307	8.603181	GTCTTTGCTGAGAAAGAGATTTAGATC	58.397	37.037	7.14	0.00	41.54	2.75
5355	5440	2.890808	ATGTGCCATGTAGTAGACGG	57.109	50.000	0.00	0.00	0.00	4.79
5357	5442	6.494893	TTCAAAATGTGCCATGTAGTAGAC	57.505	37.500	0.00	0.00	0.00	2.59
5367	5452	3.825585	TCATACAGCTTCAAAATGTGCCA	59.174	39.130	0.00	0.00	0.00	4.92
5369	5454	7.253422	AGTAATCATACAGCTTCAAAATGTGC	58.747	34.615	0.00	0.00	34.29	4.57
5417	5502	3.002708	ACCGTTTTGGATTTTGCGTAC	57.997	42.857	0.00	0.00	42.00	3.67
5519	5604	8.971073	CAAACTGGATTCCAAACTATTCCTATT	58.029	33.333	6.88	0.00	30.80	1.73
5539	5624	9.630098	AAATATATGTGTTCTGAAAGCAAACTG	57.370	29.630	0.00	0.00	0.00	3.16
5545	5630	9.173939	GTGCATAAATATATGTGTTCTGAAAGC	57.826	33.333	0.00	0.00	40.90	3.51
5635	5726	4.209538	TCCATAGCAGCAGCATAACAATT	58.790	39.130	3.17	0.00	45.49	2.32
5637	5728	3.208594	CTCCATAGCAGCAGCATAACAA	58.791	45.455	3.17	0.00	45.49	2.83
5736	5828	3.520721	TGGTATATCCATCCTCATGCAGG	59.479	47.826	0.00	0.00	41.91	4.85
6018	6111	7.168219	TCAGAAATCATAAGGCTAACACAACT	58.832	34.615	0.00	0.00	0.00	3.16
6062	6220	5.754890	TGTTAACCTAAAGTGTTCTCGGAAC	59.245	40.000	2.48	9.13	0.00	3.62
6063	6221	5.916318	TGTTAACCTAAAGTGTTCTCGGAA	58.084	37.500	2.48	0.00	0.00	4.30
6064	6222	5.534207	TGTTAACCTAAAGTGTTCTCGGA	57.466	39.130	2.48	0.00	0.00	4.55
6065	6223	6.649557	AGAATGTTAACCTAAAGTGTTCTCGG	59.350	38.462	2.48	0.00	0.00	4.63
6066	6224	7.653767	AGAATGTTAACCTAAAGTGTTCTCG	57.346	36.000	2.48	0.00	0.00	4.04
6068	6226	9.000486	GCTAAGAATGTTAACCTAAAGTGTTCT	58.000	33.333	2.48	0.00	0.00	3.01
6069	6227	8.235226	GGCTAAGAATGTTAACCTAAAGTGTTC	58.765	37.037	2.48	0.00	0.00	3.18
6070	6228	7.942894	AGGCTAAGAATGTTAACCTAAAGTGTT	59.057	33.333	2.48	0.00	0.00	3.32
6071	6229	7.459234	AGGCTAAGAATGTTAACCTAAAGTGT	58.541	34.615	2.48	0.00	0.00	3.55
6072	6230	7.923414	AGGCTAAGAATGTTAACCTAAAGTG	57.077	36.000	2.48	0.00	0.00	3.16
6078	6236	9.700831	AAATCATAAGGCTAAGAATGTTAACCT	57.299	29.630	2.48	0.00	0.00	3.50
6079	6237	9.952188	GAAATCATAAGGCTAAGAATGTTAACC	57.048	33.333	2.48	0.00	0.00	2.85
6083	6241	9.638176	ATCAGAAATCATAAGGCTAAGAATGTT	57.362	29.630	0.00	0.00	0.00	2.71
6084	6242	9.638176	AATCAGAAATCATAAGGCTAAGAATGT	57.362	29.630	0.00	0.00	0.00	2.71
6101	6259	9.812347	TGTGGCCAATTATATCTAATCAGAAAT	57.188	29.630	7.24	0.00	33.50	2.17
6102	6260	9.812347	ATGTGGCCAATTATATCTAATCAGAAA	57.188	29.630	7.24	0.00	33.50	2.52
6103	6261	9.812347	AATGTGGCCAATTATATCTAATCAGAA	57.188	29.630	7.24	0.00	33.50	3.02
6104	6262	9.453572	GAATGTGGCCAATTATATCTAATCAGA	57.546	33.333	7.24	0.00	34.56	3.27
6105	6263	8.393366	CGAATGTGGCCAATTATATCTAATCAG	58.607	37.037	7.24	0.00	0.00	2.90
6106	6264	7.336679	CCGAATGTGGCCAATTATATCTAATCA	59.663	37.037	7.24	0.00	0.00	2.57
6107	6265	7.552687	TCCGAATGTGGCCAATTATATCTAATC	59.447	37.037	7.24	0.00	0.00	1.75
6108	6266	7.402054	TCCGAATGTGGCCAATTATATCTAAT	58.598	34.615	7.24	0.00	0.00	1.73
6109	6267	6.774673	TCCGAATGTGGCCAATTATATCTAA	58.225	36.000	7.24	0.00	0.00	2.10
6110	6268	6.212589	TCTCCGAATGTGGCCAATTATATCTA	59.787	38.462	7.24	0.00	0.00	1.98
6111	6269	5.013079	TCTCCGAATGTGGCCAATTATATCT	59.987	40.000	7.24	0.00	0.00	1.98
6112	6270	5.245531	TCTCCGAATGTGGCCAATTATATC	58.754	41.667	7.24	0.00	0.00	1.63
6113	6271	5.241403	TCTCCGAATGTGGCCAATTATAT	57.759	39.130	7.24	0.00	0.00	0.86
6114	6272	4.698201	TCTCCGAATGTGGCCAATTATA	57.302	40.909	7.24	0.00	0.00	0.98
6115	6273	3.576078	TCTCCGAATGTGGCCAATTAT	57.424	42.857	7.24	0.00	0.00	1.28
6116	6274	3.013921	GTTCTCCGAATGTGGCCAATTA	58.986	45.455	7.24	0.00	0.00	1.40
6117	6275	1.818674	GTTCTCCGAATGTGGCCAATT	59.181	47.619	7.24	10.07	0.00	2.32
6118	6276	1.271871	TGTTCTCCGAATGTGGCCAAT	60.272	47.619	7.24	0.00	0.00	3.16
6119	6277	0.109532	TGTTCTCCGAATGTGGCCAA	59.890	50.000	7.24	0.00	0.00	4.52
6120	6278	0.605319	GTGTTCTCCGAATGTGGCCA	60.605	55.000	0.00	0.00	0.00	5.36
6121	6279	0.321653	AGTGTTCTCCGAATGTGGCC	60.322	55.000	0.00	0.00	0.00	5.36
6122	6280	1.523758	AAGTGTTCTCCGAATGTGGC	58.476	50.000	0.00	0.00	0.00	5.01
6123	6281	3.684788	CCTAAAGTGTTCTCCGAATGTGG	59.315	47.826	0.00	0.00	0.00	4.17
6131	6289	7.981102	AGAATGTTAACCTAAAGTGTTCTCC	57.019	36.000	2.48	0.00	0.00	3.71
6181	6389	8.109705	TCTGTCATATACTGCAAAACAAACAT	57.890	30.769	0.00	0.00	0.00	2.71
6358	6567	6.381994	ACGATAACACTACATAAAAGAGGGGA	59.618	38.462	0.00	0.00	0.00	4.81
6744	6954	3.181472	CGGTCATGAAGATGAGGATGTCA	60.181	47.826	0.00	0.00	39.36	3.58
6984	7194	5.871524	CCCGGTATCAATGACATAGAAGATG	59.128	44.000	0.00	0.00	0.00	2.90
7059	7269	2.223876	TGCTCGACTACACGGAAAAACT	60.224	45.455	0.00	0.00	0.00	2.66
7524	7734	4.960938	GGACAAAGAATTTTTCCCTTGCT	58.039	39.130	0.00	0.00	46.59	3.91
7566	7776	3.181461	ACTGCAGGTATACATTCAGGAGC	60.181	47.826	19.93	5.42	0.00	4.70
7689	7899	1.561542	GGGATCTTCAGGGCTTTCAGA	59.438	52.381	0.00	0.00	0.00	3.27
8208	8421	6.934048	GCTTCTTCCAGCTTTGTTATCTAT	57.066	37.500	0.00	0.00	36.79	1.98
8249	8462	2.823747	GTTTCCCTCGGCCTACAAAAAT	59.176	45.455	0.00	0.00	0.00	1.82
8320	8533	3.194542	AGAGTGCAGGCTTGAACTACTAG	59.805	47.826	9.91	0.00	43.56	2.57
8388	8603	0.827925	TTGACAGTGCCGTCTCCTCT	60.828	55.000	0.00	0.00	36.82	3.69
8428	8643	4.021544	ACAAACAAGCACCAAGAAGAACAA	60.022	37.500	0.00	0.00	0.00	2.83
8429	8644	3.509575	ACAAACAAGCACCAAGAAGAACA	59.490	39.130	0.00	0.00	0.00	3.18
8430	8645	4.110036	ACAAACAAGCACCAAGAAGAAC	57.890	40.909	0.00	0.00	0.00	3.01
8463	8678	1.272807	TTGTTTACGGAGGGAGAGGG	58.727	55.000	0.00	0.00	0.00	4.30
8464	8679	3.629142	ATTTGTTTACGGAGGGAGAGG	57.371	47.619	0.00	0.00	0.00	3.69
8465	8680	7.723324	TCTTATATTTGTTTACGGAGGGAGAG	58.277	38.462	0.00	0.00	0.00	3.20
8466	8681	7.664552	TCTTATATTTGTTTACGGAGGGAGA	57.335	36.000	0.00	0.00	0.00	3.71
8467	8682	6.424207	GCTCTTATATTTGTTTACGGAGGGAG	59.576	42.308	0.00	0.00	0.00	4.30
8468	8683	6.126997	TGCTCTTATATTTGTTTACGGAGGGA	60.127	38.462	0.00	0.00	0.00	4.20
8469	8684	6.053005	TGCTCTTATATTTGTTTACGGAGGG	58.947	40.000	0.00	0.00	0.00	4.30
8470	8685	7.730364	ATGCTCTTATATTTGTTTACGGAGG	57.270	36.000	0.00	0.00	0.00	4.30
8501	8716	9.654663	AAGAGCGTTTAGATCACTATTTTAGTT	57.345	29.630	0.00	0.00	37.82	2.24
8519	8734	9.490379	CCCTCTGTAAATAATTATAAGAGCGTT	57.510	33.333	15.40	3.17	35.46	4.84
8520	8735	8.867097	TCCCTCTGTAAATAATTATAAGAGCGT	58.133	33.333	15.40	0.00	35.46	5.07
8521	8736	9.360093	CTCCCTCTGTAAATAATTATAAGAGCG	57.640	37.037	15.40	10.78	35.46	5.03
8574	8789	6.713731	TGGAAGGAGGGAATAAAAGTAAGT	57.286	37.500	0.00	0.00	0.00	2.24
8575	8790	7.578203	AGATGGAAGGAGGGAATAAAAGTAAG	58.422	38.462	0.00	0.00	0.00	2.34
8576	8791	7.525158	AGATGGAAGGAGGGAATAAAAGTAA	57.475	36.000	0.00	0.00	0.00	2.24
8578	8793	7.713704	ATAGATGGAAGGAGGGAATAAAAGT	57.286	36.000	0.00	0.00	0.00	2.66
8584	8799	6.457011	CCCTATATAGATGGAAGGAGGGAAT	58.543	44.000	11.53	0.00	44.48	3.01
8585	8800	5.818097	GCCCTATATAGATGGAAGGAGGGAA	60.818	48.000	11.53	0.00	44.48	3.97
8588	8803	3.970640	GGCCCTATATAGATGGAAGGAGG	59.029	52.174	11.53	1.87	0.00	4.30
8590	8805	4.994411	AGGCCCTATATAGATGGAAGGA	57.006	45.455	11.53	0.00	0.00	3.36
8591	8806	7.472100	CGAATTAGGCCCTATATAGATGGAAGG	60.472	44.444	11.53	3.94	0.00	3.46
8592	8807	7.070074	ACGAATTAGGCCCTATATAGATGGAAG	59.930	40.741	11.53	0.00	0.00	3.46
8595	8810	6.732896	ACGAATTAGGCCCTATATAGATGG	57.267	41.667	11.53	6.04	0.00	3.51
8596	8811	9.449719	AAAAACGAATTAGGCCCTATATAGATG	57.550	33.333	11.53	3.39	0.00	2.90
8598	8813	7.816031	CGAAAAACGAATTAGGCCCTATATAGA	59.184	37.037	11.53	0.00	45.77	1.98
8599	8814	7.960793	CGAAAAACGAATTAGGCCCTATATAG	58.039	38.462	0.00	2.46	45.77	1.31
8601	8816	6.796705	CGAAAAACGAATTAGGCCCTATAT	57.203	37.500	0.00	0.00	45.77	0.86
8617	8832	4.860072	AGTCAAAGGCATTCTCGAAAAAC	58.140	39.130	0.00	0.00	0.00	2.43
8618	8833	6.817765	ATAGTCAAAGGCATTCTCGAAAAA	57.182	33.333	0.00	0.00	0.00	1.94
8619	8834	6.429692	TCAATAGTCAAAGGCATTCTCGAAAA	59.570	34.615	0.00	0.00	0.00	2.29
8620	8835	5.937540	TCAATAGTCAAAGGCATTCTCGAAA	59.062	36.000	0.00	0.00	0.00	3.46
8621	8836	5.351465	GTCAATAGTCAAAGGCATTCTCGAA	59.649	40.000	0.00	0.00	0.00	3.71
8624	8839	6.372659	TCTTGTCAATAGTCAAAGGCATTCTC	59.627	38.462	0.00	0.00	0.00	2.87
8625	8840	6.240894	TCTTGTCAATAGTCAAAGGCATTCT	58.759	36.000	0.00	0.00	0.00	2.40
8626	8841	6.500684	TCTTGTCAATAGTCAAAGGCATTC	57.499	37.500	0.00	0.00	0.00	2.67
8628	8843	8.579850	TTAATCTTGTCAATAGTCAAAGGCAT	57.420	30.769	0.00	0.00	0.00	4.40
8655	8870	9.872721	TTTTTCACATTATGCATGTCATGTATT	57.127	25.926	19.73	2.39	43.17	1.89
8674	8889	8.897752	AGGAGCTTTCAGTGATATATTTTTCAC	58.102	33.333	0.00	0.00	42.03	3.18
8691	8906	8.246180	TCAAATTCATATGTGAAAGGAGCTTTC	58.754	33.333	9.08	0.00	46.67	2.62
8692	8907	8.031277	GTCAAATTCATATGTGAAAGGAGCTTT	58.969	33.333	9.08	1.70	46.67	3.51
8696	8911	6.094048	ACCGTCAAATTCATATGTGAAAGGAG	59.906	38.462	9.08	0.81	46.67	3.69
8697	8912	5.943416	ACCGTCAAATTCATATGTGAAAGGA	59.057	36.000	9.08	4.65	46.67	3.36
8698	8913	6.194796	ACCGTCAAATTCATATGTGAAAGG	57.805	37.500	9.08	8.46	46.67	3.11
8699	8914	7.376866	GCATACCGTCAAATTCATATGTGAAAG	59.623	37.037	9.08	3.12	46.67	2.62
8700	8915	7.066887	AGCATACCGTCAAATTCATATGTGAAA	59.933	33.333	9.08	0.00	46.67	2.69
8702	8917	6.054941	AGCATACCGTCAAATTCATATGTGA	58.945	36.000	1.90	0.00	0.00	3.58
8704	8919	6.942532	AAGCATACCGTCAAATTCATATGT	57.057	33.333	1.90	0.00	0.00	2.29
8705	8920	9.333497	CATAAAGCATACCGTCAAATTCATATG	57.667	33.333	0.00	0.00	0.00	1.78
8706	8921	8.023128	GCATAAAGCATACCGTCAAATTCATAT	58.977	33.333	0.00	0.00	44.79	1.78
8708	8923	6.208644	GCATAAAGCATACCGTCAAATTCAT	58.791	36.000	0.00	0.00	44.79	2.57
8749	8964	9.686683	ATTTTGACCTAGTGTTAGAGCAATAAT	57.313	29.630	0.00	0.00	0.00	1.28
8752	8967	9.167311	CTAATTTTGACCTAGTGTTAGAGCAAT	57.833	33.333	0.00	0.00	0.00	3.56
8753	8968	7.119262	GCTAATTTTGACCTAGTGTTAGAGCAA	59.881	37.037	0.00	0.00	0.00	3.91
8754	8969	6.594159	GCTAATTTTGACCTAGTGTTAGAGCA	59.406	38.462	0.00	0.00	0.00	4.26
8755	8970	6.037281	GGCTAATTTTGACCTAGTGTTAGAGC	59.963	42.308	0.00	0.00	0.00	4.09
8756	8971	7.331791	AGGCTAATTTTGACCTAGTGTTAGAG	58.668	38.462	0.00	0.00	0.00	2.43
8757	8972	7.253905	AGGCTAATTTTGACCTAGTGTTAGA	57.746	36.000	0.00	0.00	0.00	2.10
8758	8973	6.255887	CGAGGCTAATTTTGACCTAGTGTTAG	59.744	42.308	0.00	0.00	30.95	2.34
8759	8974	6.071221	TCGAGGCTAATTTTGACCTAGTGTTA	60.071	38.462	0.00	0.00	30.95	2.41
8760	8975	4.935808	CGAGGCTAATTTTGACCTAGTGTT	59.064	41.667	0.00	0.00	30.95	3.32
8762	8977	4.755411	TCGAGGCTAATTTTGACCTAGTG	58.245	43.478	0.00	0.00	30.95	2.74
8764	8979	6.737254	TTTTCGAGGCTAATTTTGACCTAG	57.263	37.500	0.00	0.00	30.95	3.02
8765	8980	6.347888	CGTTTTTCGAGGCTAATTTTGACCTA	60.348	38.462	0.00	0.00	42.86	3.08
8767	8982	4.615541	CGTTTTTCGAGGCTAATTTTGACC	59.384	41.667	0.00	0.00	42.86	4.02
8768	8983	4.088071	GCGTTTTTCGAGGCTAATTTTGAC	59.912	41.667	0.00	0.00	42.86	3.18
8769	8984	4.223659	GCGTTTTTCGAGGCTAATTTTGA	58.776	39.130	0.00	0.00	42.86	2.69
8770	8985	3.978217	TGCGTTTTTCGAGGCTAATTTTG	59.022	39.130	0.00	0.00	42.86	2.44
8771	8986	4.231718	TGCGTTTTTCGAGGCTAATTTT	57.768	36.364	0.00	0.00	42.86	1.82
8776	8991	2.933906	CCTAATGCGTTTTTCGAGGCTA	59.066	45.455	0.00	0.00	42.86	3.93
8777	8992	1.737793	CCTAATGCGTTTTTCGAGGCT	59.262	47.619	0.00	0.00	42.86	4.58
8779	8994	2.095372	GGACCTAATGCGTTTTTCGAGG	59.905	50.000	0.00	0.00	42.86	4.63
8780	8995	3.000727	AGGACCTAATGCGTTTTTCGAG	58.999	45.455	0.00	0.00	42.86	4.04
8781	8996	3.048337	AGGACCTAATGCGTTTTTCGA	57.952	42.857	0.00	0.00	42.86	3.71
8783	8998	8.149973	TCAATATAGGACCTAATGCGTTTTTC	57.850	34.615	5.03	0.00	0.00	2.29
8784	8999	8.567948	CATCAATATAGGACCTAATGCGTTTTT	58.432	33.333	5.03	0.00	0.00	1.94
8785	9000	7.174946	CCATCAATATAGGACCTAATGCGTTTT	59.825	37.037	5.03	0.00	0.00	2.43
8787	9002	6.013725	TCCATCAATATAGGACCTAATGCGTT	60.014	38.462	5.03	0.00	0.00	4.84
8788	9003	5.483937	TCCATCAATATAGGACCTAATGCGT	59.516	40.000	5.03	0.00	0.00	5.24
8789	9004	5.977635	TCCATCAATATAGGACCTAATGCG	58.022	41.667	5.03	0.00	0.00	4.73
8790	9005	6.825721	CCTTCCATCAATATAGGACCTAATGC	59.174	42.308	5.03	0.00	0.00	3.56
8791	9006	8.150827	TCCTTCCATCAATATAGGACCTAATG	57.849	38.462	5.03	4.34	30.30	1.90
8792	9007	7.404396	CCTCCTTCCATCAATATAGGACCTAAT	59.596	40.741	5.03	0.00	31.92	1.73
8794	9009	6.264528	CCTCCTTCCATCAATATAGGACCTA	58.735	44.000	3.00	3.00	31.92	3.08
8795	9010	5.097234	CCTCCTTCCATCAATATAGGACCT	58.903	45.833	0.00	0.00	31.92	3.85
8796	9011	4.226168	CCCTCCTTCCATCAATATAGGACC	59.774	50.000	0.00	0.00	31.92	4.46
8797	9012	5.094387	TCCCTCCTTCCATCAATATAGGAC	58.906	45.833	0.00	0.00	31.92	3.85
8798	9013	5.162715	ACTCCCTCCTTCCATCAATATAGGA	60.163	44.000	0.00	0.00	34.07	2.94
8799	9014	5.097234	ACTCCCTCCTTCCATCAATATAGG	58.903	45.833	0.00	0.00	0.00	2.57
8800	9015	6.127196	GCTACTCCCTCCTTCCATCAATATAG	60.127	46.154	0.00	0.00	0.00	1.31
8801	9016	5.721960	GCTACTCCCTCCTTCCATCAATATA	59.278	44.000	0.00	0.00	0.00	0.86
8803	9018	3.904339	GCTACTCCCTCCTTCCATCAATA	59.096	47.826	0.00	0.00	0.00	1.90
8804	9019	2.708325	GCTACTCCCTCCTTCCATCAAT	59.292	50.000	0.00	0.00	0.00	2.57
8807	9022	1.967779	GAGCTACTCCCTCCTTCCATC	59.032	57.143	0.00	0.00	0.00	3.51
8809	9024	0.710588	TGAGCTACTCCCTCCTTCCA	59.289	55.000	0.00	0.00	0.00	3.53
8810	9025	1.867363	TTGAGCTACTCCCTCCTTCC	58.133	55.000	0.00	0.00	0.00	3.46
8811	9026	4.495690	AATTTGAGCTACTCCCTCCTTC	57.504	45.455	0.00	0.00	0.00	3.46
8812	9027	4.936685	AAATTTGAGCTACTCCCTCCTT	57.063	40.909	0.00	0.00	0.00	3.36
8813	9028	5.281314	TCTAAATTTGAGCTACTCCCTCCT	58.719	41.667	0.00	0.00	0.00	3.69
8814	9029	5.615925	TCTAAATTTGAGCTACTCCCTCC	57.384	43.478	0.00	0.00	0.00	4.30
8816	9031	7.200434	TCAATCTAAATTTGAGCTACTCCCT	57.800	36.000	0.00	0.00	0.00	4.20
8817	9032	8.348507	CAATCAATCTAAATTTGAGCTACTCCC	58.651	37.037	0.00	0.00	36.60	4.30
8818	9033	9.113838	TCAATCAATCTAAATTTGAGCTACTCC	57.886	33.333	0.00	0.00	36.60	3.85
8819	9034	9.928236	GTCAATCAATCTAAATTTGAGCTACTC	57.072	33.333	0.00	0.00	36.60	2.59
8820	9035	9.453572	TGTCAATCAATCTAAATTTGAGCTACT	57.546	29.630	0.00	0.00	36.60	2.57
8824	9039	9.577110	TTCATGTCAATCAATCTAAATTTGAGC	57.423	29.630	0.00	0.00	36.60	4.26
8867	9976	1.865865	TGTTCACTTCAGAACCGAGC	58.134	50.000	4.58	0.00	45.62	5.03
8893	10002	1.677576	CATAACAAGCGGATGCACCAT	59.322	47.619	0.00	0.00	46.23	3.55
8930	10045	1.208052	GCAGTTCCTCATAGCTGGACA	59.792	52.381	0.00	0.00	31.24	4.02
8961	10077	6.952773	AAAGTAGTTGCTGTTTATCCAACA	57.047	33.333	5.66	0.00	43.55	3.33
8962	10078	6.861572	GGAAAAGTAGTTGCTGTTTATCCAAC	59.138	38.462	0.00	0.00	39.20	3.77
8963	10079	6.775629	AGGAAAAGTAGTTGCTGTTTATCCAA	59.224	34.615	0.00	0.00	0.00	3.53
8964	10080	6.206634	CAGGAAAAGTAGTTGCTGTTTATCCA	59.793	38.462	0.00	0.00	40.83	3.41
8965	10081	6.430000	TCAGGAAAAGTAGTTGCTGTTTATCC	59.570	38.462	6.38	0.00	44.66	2.59
8966	10082	7.361286	CCTCAGGAAAAGTAGTTGCTGTTTATC	60.361	40.741	6.38	0.00	44.66	1.75
8967	10083	6.431234	CCTCAGGAAAAGTAGTTGCTGTTTAT	59.569	38.462	6.38	0.00	44.66	1.40
8968	10084	5.763204	CCTCAGGAAAAGTAGTTGCTGTTTA	59.237	40.000	6.38	0.00	44.66	2.01
8969	10085	4.580580	CCTCAGGAAAAGTAGTTGCTGTTT	59.419	41.667	6.38	0.00	44.66	2.83
8970	10086	4.137543	CCTCAGGAAAAGTAGTTGCTGTT	58.862	43.478	6.38	0.00	44.66	3.16
8971	10087	3.496870	CCCTCAGGAAAAGTAGTTGCTGT	60.497	47.826	0.00	0.00	44.66	4.40
8972	10088	3.077359	CCCTCAGGAAAAGTAGTTGCTG	58.923	50.000	0.00	0.50	45.45	4.41
8973	10089	2.711547	ACCCTCAGGAAAAGTAGTTGCT	59.288	45.455	0.00	0.00	36.73	3.91
8974	10090	3.075148	GACCCTCAGGAAAAGTAGTTGC	58.925	50.000	0.00	0.00	36.73	4.17
8975	10091	4.351874	TGACCCTCAGGAAAAGTAGTTG	57.648	45.455	0.00	0.00	36.73	3.16
8976	10092	5.377478	CTTTGACCCTCAGGAAAAGTAGTT	58.623	41.667	0.00	0.00	36.46	2.24
8977	10093	4.202472	CCTTTGACCCTCAGGAAAAGTAGT	60.202	45.833	0.00	0.00	38.03	2.73
8978	10094	4.202472	ACCTTTGACCCTCAGGAAAAGTAG	60.202	45.833	0.00	0.00	38.03	2.57
8979	10095	3.720002	ACCTTTGACCCTCAGGAAAAGTA	59.280	43.478	0.00	0.00	38.03	2.24
8980	10096	2.514160	ACCTTTGACCCTCAGGAAAAGT	59.486	45.455	0.00	0.00	38.03	2.66
8981	10097	3.149981	GACCTTTGACCCTCAGGAAAAG	58.850	50.000	0.00	0.00	38.75	2.27
8982	10098	2.512056	TGACCTTTGACCCTCAGGAAAA	59.488	45.455	0.00	0.00	36.73	2.29
8983	10099	2.131854	TGACCTTTGACCCTCAGGAAA	58.868	47.619	0.00	0.00	36.73	3.13
8984	10100	1.814429	TGACCTTTGACCCTCAGGAA	58.186	50.000	0.00	0.00	36.73	3.36
8985	10101	2.044793	ATGACCTTTGACCCTCAGGA	57.955	50.000	0.00	0.00	36.73	3.86
8986	10102	2.887151	AATGACCTTTGACCCTCAGG	57.113	50.000	0.00	0.00	40.04	3.86
8987	10103	4.286297	TGTAATGACCTTTGACCCTCAG	57.714	45.455	0.00	0.00	0.00	3.35
8988	10104	4.927267	ATGTAATGACCTTTGACCCTCA	57.073	40.909	0.00	0.00	0.00	3.86
8989	10105	7.506114	TGTATATGTAATGACCTTTGACCCTC	58.494	38.462	0.00	0.00	0.00	4.30
8990	10106	7.446106	TGTATATGTAATGACCTTTGACCCT	57.554	36.000	0.00	0.00	0.00	4.34
8991	10107	7.719633	ACATGTATATGTAATGACCTTTGACCC	59.280	37.037	2.87	0.00	45.45	4.46
8992	10108	8.559536	CACATGTATATGTAATGACCTTTGACC	58.440	37.037	4.64	0.00	45.53	4.02
8993	10109	9.109393	ACACATGTATATGTAATGACCTTTGAC	57.891	33.333	4.64	0.00	45.53	3.18
8994	10110	9.108284	CACACATGTATATGTAATGACCTTTGA	57.892	33.333	4.64	0.00	45.53	2.69
8995	10111	9.108284	TCACACATGTATATGTAATGACCTTTG	57.892	33.333	4.64	0.00	45.53	2.77
8996	10112	9.851686	ATCACACATGTATATGTAATGACCTTT	57.148	29.630	16.24	3.76	45.53	3.11
9004	10120	9.606631	TGCACTTTATCACACATGTATATGTAA	57.393	29.630	4.64	0.00	45.53	2.41
9005	10121	9.260002	CTGCACTTTATCACACATGTATATGTA	57.740	33.333	4.64	0.00	45.53	2.29
9007	10123	8.369218	TCTGCACTTTATCACACATGTATATG	57.631	34.615	0.00	0.00	40.24	1.78
9008	10124	8.962884	TTCTGCACTTTATCACACATGTATAT	57.037	30.769	0.00	0.00	0.00	0.86
9009	10125	8.785329	TTTCTGCACTTTATCACACATGTATA	57.215	30.769	0.00	0.00	0.00	1.47
9010	10126	7.686438	TTTCTGCACTTTATCACACATGTAT	57.314	32.000	0.00	0.00	0.00	2.29
9011	10127	7.359595	GTTTTCTGCACTTTATCACACATGTA	58.640	34.615	0.00	0.00	0.00	2.29
9012	10128	6.208644	GTTTTCTGCACTTTATCACACATGT	58.791	36.000	0.00	0.00	0.00	3.21
9013	10129	5.630680	GGTTTTCTGCACTTTATCACACATG	59.369	40.000	0.00	0.00	0.00	3.21
9014	10130	5.278957	GGGTTTTCTGCACTTTATCACACAT	60.279	40.000	0.00	0.00	0.00	3.21
9015	10131	4.037446	GGGTTTTCTGCACTTTATCACACA	59.963	41.667	0.00	0.00	0.00	3.72
9016	10132	4.546570	GGGTTTTCTGCACTTTATCACAC	58.453	43.478	0.00	0.00	0.00	3.82
9017	10133	3.572255	GGGGTTTTCTGCACTTTATCACA	59.428	43.478	0.00	0.00	0.00	3.58
9018	10134	3.826729	AGGGGTTTTCTGCACTTTATCAC	59.173	43.478	0.00	0.00	0.00	3.06
9019	10135	4.112634	AGGGGTTTTCTGCACTTTATCA	57.887	40.909	0.00	0.00	0.00	2.15
9020	10136	6.775594	ATAAGGGGTTTTCTGCACTTTATC	57.224	37.500	0.00	0.00	0.00	1.75
9021	10137	7.179269	TGTATAAGGGGTTTTCTGCACTTTAT	58.821	34.615	0.00	0.00	0.00	1.40
9022	10138	6.544650	TGTATAAGGGGTTTTCTGCACTTTA	58.455	36.000	0.00	0.00	0.00	1.85
9023	10139	5.390387	TGTATAAGGGGTTTTCTGCACTTT	58.610	37.500	0.00	0.00	0.00	2.66
9024	10140	4.993028	TGTATAAGGGGTTTTCTGCACTT	58.007	39.130	0.00	0.00	0.00	3.16
9025	10141	4.650972	TGTATAAGGGGTTTTCTGCACT	57.349	40.909	0.00	0.00	0.00	4.40
9026	10142	4.379082	CGTTGTATAAGGGGTTTTCTGCAC	60.379	45.833	0.00	0.00	0.00	4.57
9027	10143	3.754323	CGTTGTATAAGGGGTTTTCTGCA	59.246	43.478	0.00	0.00	0.00	4.41
9028	10144	3.128068	CCGTTGTATAAGGGGTTTTCTGC	59.872	47.826	3.19	0.00	38.01	4.26
9029	10145	4.957759	CCGTTGTATAAGGGGTTTTCTG	57.042	45.455	3.19	0.00	38.01	3.02
9037	10153	4.142093	CGGTATATCCCCGTTGTATAAGGG	60.142	50.000	4.10	4.10	44.67	3.95
9038	10154	4.706476	TCGGTATATCCCCGTTGTATAAGG	59.294	45.833	12.09	0.00	45.63	2.69
9039	10155	5.902613	TCGGTATATCCCCGTTGTATAAG	57.097	43.478	12.09	0.00	45.63	1.73
9040	10156	6.295236	CCTTTCGGTATATCCCCGTTGTATAA	60.295	42.308	12.09	0.00	45.63	0.98
9041	10157	5.185635	CCTTTCGGTATATCCCCGTTGTATA	59.814	44.000	12.09	0.00	45.63	1.47
9042	10158	4.020839	CCTTTCGGTATATCCCCGTTGTAT	60.021	45.833	12.09	0.00	45.63	2.29
9043	10159	3.321682	CCTTTCGGTATATCCCCGTTGTA	59.678	47.826	12.09	0.00	45.63	2.41
9044	10160	2.103601	CCTTTCGGTATATCCCCGTTGT	59.896	50.000	12.09	0.00	45.63	3.32
9045	10161	2.549349	CCCTTTCGGTATATCCCCGTTG	60.549	54.545	12.09	5.52	45.63	4.10
9046	10162	1.695788	CCCTTTCGGTATATCCCCGTT	59.304	52.381	12.09	0.00	45.63	4.44
9047	10163	1.345063	CCCTTTCGGTATATCCCCGT	58.655	55.000	12.09	0.00	45.63	5.28
9048	10164	0.611714	CCCCTTTCGGTATATCCCCG	59.388	60.000	7.29	7.29	46.83	5.73
9049	10165	2.034436	TCCCCTTTCGGTATATCCCC	57.966	55.000	0.00	0.00	0.00	4.81
9050	10166	5.970501	ATAATCCCCTTTCGGTATATCCC	57.029	43.478	0.00	0.00	0.00	3.85
9051	10167	7.093201	TGTGTATAATCCCCTTTCGGTATATCC	60.093	40.741	0.00	0.00	0.00	2.59
9052	10168	7.844009	TGTGTATAATCCCCTTTCGGTATATC	58.156	38.462	0.00	0.00	0.00	1.63
9053	10169	7.801893	TGTGTATAATCCCCTTTCGGTATAT	57.198	36.000	0.00	0.00	0.00	0.86
9054	10170	7.676893	AGATGTGTATAATCCCCTTTCGGTATA	59.323	37.037	0.00	0.00	0.00	1.47
9055	10171	6.500751	AGATGTGTATAATCCCCTTTCGGTAT	59.499	38.462	0.00	0.00	0.00	2.73
9056	10172	5.842328	AGATGTGTATAATCCCCTTTCGGTA	59.158	40.000	0.00	0.00	0.00	4.02
9057	10173	4.658901	AGATGTGTATAATCCCCTTTCGGT	59.341	41.667	0.00	0.00	0.00	4.69
9058	10174	5.228945	AGATGTGTATAATCCCCTTTCGG	57.771	43.478	0.00	0.00	0.00	4.30
9059	10175	7.170998	GTGTTAGATGTGTATAATCCCCTTTCG	59.829	40.741	0.00	0.00	0.00	3.46
9060	10176	7.444487	GGTGTTAGATGTGTATAATCCCCTTTC	59.556	40.741	0.00	0.00	0.00	2.62
9061	10177	7.287810	GGTGTTAGATGTGTATAATCCCCTTT	58.712	38.462	0.00	0.00	0.00	3.11
9062	10178	6.183361	GGGTGTTAGATGTGTATAATCCCCTT	60.183	42.308	0.00	0.00	29.65	3.95
9063	10179	5.309806	GGGTGTTAGATGTGTATAATCCCCT	59.690	44.000	0.00	0.00	29.65	4.79
9064	10180	5.514310	GGGGTGTTAGATGTGTATAATCCCC	60.514	48.000	0.00	0.00	39.07	4.81
9065	10181	5.514310	GGGGGTGTTAGATGTGTATAATCCC	60.514	48.000	0.00	0.00	32.38	3.85
9066	10182	5.309806	AGGGGGTGTTAGATGTGTATAATCC	59.690	44.000	0.00	0.00	0.00	3.01
9067	10183	6.270231	AGAGGGGGTGTTAGATGTGTATAATC	59.730	42.308	0.00	0.00	0.00	1.75
9068	10184	6.151049	AGAGGGGGTGTTAGATGTGTATAAT	58.849	40.000	0.00	0.00	0.00	1.28
9069	10185	5.535029	AGAGGGGGTGTTAGATGTGTATAA	58.465	41.667	0.00	0.00	0.00	0.98
9070	10186	5.145564	GAGAGGGGGTGTTAGATGTGTATA	58.854	45.833	0.00	0.00	0.00	1.47
9071	10187	3.967987	GAGAGGGGGTGTTAGATGTGTAT	59.032	47.826	0.00	0.00	0.00	2.29
9072	10188	3.245839	TGAGAGGGGGTGTTAGATGTGTA	60.246	47.826	0.00	0.00	0.00	2.90
9073	10189	2.188817	GAGAGGGGGTGTTAGATGTGT	58.811	52.381	0.00	0.00	0.00	3.72
9074	10190	2.187958	TGAGAGGGGGTGTTAGATGTG	58.812	52.381	0.00	0.00	0.00	3.21
9075	10191	2.642171	TGAGAGGGGGTGTTAGATGT	57.358	50.000	0.00	0.00	0.00	3.06
9076	10192	3.264450	AGTTTGAGAGGGGGTGTTAGATG	59.736	47.826	0.00	0.00	0.00	2.90
9077	10193	3.519913	GAGTTTGAGAGGGGGTGTTAGAT	59.480	47.826	0.00	0.00	0.00	1.98
9078	10194	2.904434	GAGTTTGAGAGGGGGTGTTAGA	59.096	50.000	0.00	0.00	0.00	2.10
9079	10195	2.637872	TGAGTTTGAGAGGGGGTGTTAG	59.362	50.000	0.00	0.00	0.00	2.34
9080	10196	2.696775	TGAGTTTGAGAGGGGGTGTTA	58.303	47.619	0.00	0.00	0.00	2.41
9081	10197	1.518367	TGAGTTTGAGAGGGGGTGTT	58.482	50.000	0.00	0.00	0.00	3.32
9082	10198	1.352352	CATGAGTTTGAGAGGGGGTGT	59.648	52.381	0.00	0.00	0.00	4.16
9083	10199	1.340405	CCATGAGTTTGAGAGGGGGTG	60.340	57.143	0.00	0.00	0.00	4.61
9084	10200	0.995024	CCATGAGTTTGAGAGGGGGT	59.005	55.000	0.00	0.00	0.00	4.95
9085	10201	0.995024	ACCATGAGTTTGAGAGGGGG	59.005	55.000	0.00	0.00	0.00	5.40
9086	10202	1.340405	CCACCATGAGTTTGAGAGGGG	60.340	57.143	0.00	0.00	0.00	4.79
9087	10203	1.630369	TCCACCATGAGTTTGAGAGGG	59.370	52.381	0.00	0.00	0.00	4.30
9088	10204	3.641434	ATCCACCATGAGTTTGAGAGG	57.359	47.619	0.00	0.00	0.00	3.69
9089	10205	5.491070	TGTTATCCACCATGAGTTTGAGAG	58.509	41.667	0.00	0.00	0.00	3.20
9090	10206	5.497464	TGTTATCCACCATGAGTTTGAGA	57.503	39.130	0.00	0.00	0.00	3.27
9091	10207	5.473162	TGTTGTTATCCACCATGAGTTTGAG	59.527	40.000	0.00	0.00	0.00	3.02
9092	10208	5.240623	GTGTTGTTATCCACCATGAGTTTGA	59.759	40.000	0.00	0.00	0.00	2.69
9093	10209	5.241506	AGTGTTGTTATCCACCATGAGTTTG	59.758	40.000	0.00	0.00	31.88	2.93
9094	10210	5.241506	CAGTGTTGTTATCCACCATGAGTTT	59.758	40.000	0.00	0.00	31.88	2.66
9095	10211	4.761739	CAGTGTTGTTATCCACCATGAGTT	59.238	41.667	0.00	0.00	31.88	3.01
9096	10212	4.041567	TCAGTGTTGTTATCCACCATGAGT	59.958	41.667	0.00	0.00	31.88	3.41
9097	10213	4.578871	TCAGTGTTGTTATCCACCATGAG	58.421	43.478	0.00	0.00	31.88	2.90
9098	10214	4.041567	ACTCAGTGTTGTTATCCACCATGA	59.958	41.667	0.00	0.00	31.88	3.07
9099	10215	4.326826	ACTCAGTGTTGTTATCCACCATG	58.673	43.478	0.00	0.00	31.88	3.66
9100	10216	4.640771	ACTCAGTGTTGTTATCCACCAT	57.359	40.909	0.00	0.00	31.88	3.55
9101	10217	4.431416	AACTCAGTGTTGTTATCCACCA	57.569	40.909	3.23	0.00	37.52	4.17
9102	10218	4.023193	CCAAACTCAGTGTTGTTATCCACC	60.023	45.833	5.10	0.00	39.13	4.61
9103	10219	4.819630	TCCAAACTCAGTGTTGTTATCCAC	59.180	41.667	5.10	0.00	39.13	4.02
9104	10220	5.042463	TCCAAACTCAGTGTTGTTATCCA	57.958	39.130	5.10	0.00	39.13	3.41
9105	10221	5.305585	TCTCCAAACTCAGTGTTGTTATCC	58.694	41.667	5.10	0.00	39.13	2.59
9106	10222	5.409826	CCTCTCCAAACTCAGTGTTGTTATC	59.590	44.000	5.10	0.00	39.13	1.75
9107	10223	5.071788	TCCTCTCCAAACTCAGTGTTGTTAT	59.928	40.000	5.10	0.00	39.13	1.89
9108	10224	4.407621	TCCTCTCCAAACTCAGTGTTGTTA	59.592	41.667	5.10	0.00	39.13	2.41
9109	10225	3.199946	TCCTCTCCAAACTCAGTGTTGTT	59.800	43.478	0.00	0.00	39.13	2.83
9110	10226	2.771943	TCCTCTCCAAACTCAGTGTTGT	59.228	45.455	0.00	0.00	39.13	3.32
9111	10227	3.475566	TCCTCTCCAAACTCAGTGTTG	57.524	47.619	0.00	0.00	39.13	3.33
9112	10228	4.503714	TTTCCTCTCCAAACTCAGTGTT	57.496	40.909	0.00	0.00	41.29	3.32
9113	10229	4.503714	TTTTCCTCTCCAAACTCAGTGT	57.496	40.909	0.00	0.00	0.00	3.55
9114	10230	4.276926	CCTTTTTCCTCTCCAAACTCAGTG	59.723	45.833	0.00	0.00	0.00	3.66
9115	10231	4.079730	ACCTTTTTCCTCTCCAAACTCAGT	60.080	41.667	0.00	0.00	0.00	3.41
9116	10232	4.464947	ACCTTTTTCCTCTCCAAACTCAG	58.535	43.478	0.00	0.00	0.00	3.35
9117	10233	4.519906	ACCTTTTTCCTCTCCAAACTCA	57.480	40.909	0.00	0.00	0.00	3.41
9118	10234	5.106118	GCATACCTTTTTCCTCTCCAAACTC	60.106	44.000	0.00	0.00	0.00	3.01
9119	10235	4.767409	GCATACCTTTTTCCTCTCCAAACT	59.233	41.667	0.00	0.00	0.00	2.66
9120	10236	4.767409	AGCATACCTTTTTCCTCTCCAAAC	59.233	41.667	0.00	0.00	0.00	2.93
9121	10237	4.766891	CAGCATACCTTTTTCCTCTCCAAA	59.233	41.667	0.00	0.00	0.00	3.28
9122	10238	4.335416	CAGCATACCTTTTTCCTCTCCAA	58.665	43.478	0.00	0.00	0.00	3.53
9123	10239	3.873801	GCAGCATACCTTTTTCCTCTCCA	60.874	47.826	0.00	0.00	0.00	3.86
9124	10240	2.685388	GCAGCATACCTTTTTCCTCTCC	59.315	50.000	0.00	0.00	0.00	3.71
9125	10241	2.352960	CGCAGCATACCTTTTTCCTCTC	59.647	50.000	0.00	0.00	0.00	3.20
9126	10242	2.359900	CGCAGCATACCTTTTTCCTCT	58.640	47.619	0.00	0.00	0.00	3.69
9127	10243	2.832672	CGCAGCATACCTTTTTCCTC	57.167	50.000	0.00	0.00	0.00	3.71
9142	10258	3.177920	GCACAGACTCGAGCGCAG	61.178	66.667	13.61	2.69	0.00	5.18
9143	10259	4.724602	GGCACAGACTCGAGCGCA	62.725	66.667	13.61	0.00	0.00	6.09
9144	10260	3.923563	AAGGCACAGACTCGAGCGC	62.924	63.158	13.61	0.00	0.00	5.92
9145	10261	1.803519	GAAGGCACAGACTCGAGCG	60.804	63.158	13.61	3.76	0.00	5.03
9146	10262	1.803519	CGAAGGCACAGACTCGAGC	60.804	63.158	13.61	5.49	0.00	5.03
9147	10263	0.730834	CACGAAGGCACAGACTCGAG	60.731	60.000	11.84	11.84	0.00	4.04
9148	10264	1.170290	TCACGAAGGCACAGACTCGA	61.170	55.000	0.00	0.00	0.00	4.04
9149	10265	0.318699	TTCACGAAGGCACAGACTCG	60.319	55.000	0.00	0.00	0.00	4.18
9150	10266	1.000163	TCTTCACGAAGGCACAGACTC	60.000	52.381	6.94	0.00	38.88	3.36
9151	10267	1.040646	TCTTCACGAAGGCACAGACT	58.959	50.000	6.94	0.00	38.88	3.24
9152	10268	1.527311	GTTCTTCACGAAGGCACAGAC	59.473	52.381	6.94	0.00	38.88	3.51
9153	10269	1.412710	AGTTCTTCACGAAGGCACAGA	59.587	47.619	6.94	0.00	38.88	3.41
9154	10270	1.795286	GAGTTCTTCACGAAGGCACAG	59.205	52.381	6.94	0.00	38.88	3.66
9155	10271	1.138069	TGAGTTCTTCACGAAGGCACA	59.862	47.619	6.94	3.46	38.88	4.57
9156	10272	1.795286	CTGAGTTCTTCACGAAGGCAC	59.205	52.381	6.94	4.81	38.88	5.01
9157	10273	1.873903	GCTGAGTTCTTCACGAAGGCA	60.874	52.381	6.94	1.07	38.88	4.75
9158	10274	0.793250	GCTGAGTTCTTCACGAAGGC	59.207	55.000	6.94	1.45	38.88	4.35
9159	10275	1.270305	TGGCTGAGTTCTTCACGAAGG	60.270	52.381	6.94	0.00	38.88	3.46
9160	10276	2.154854	TGGCTGAGTTCTTCACGAAG	57.845	50.000	0.08	0.08	39.71	3.79
9161	10277	2.158957	AGTTGGCTGAGTTCTTCACGAA	60.159	45.455	0.00	0.00	0.00	3.85
9162	10278	1.412710	AGTTGGCTGAGTTCTTCACGA	59.587	47.619	0.00	0.00	0.00	4.35
9163	10279	1.528586	CAGTTGGCTGAGTTCTTCACG	59.471	52.381	0.00	0.00	45.28	4.35
9164	10280	2.565841	ACAGTTGGCTGAGTTCTTCAC	58.434	47.619	1.30	0.00	45.28	3.18
9165	10281	4.127171	GTTACAGTTGGCTGAGTTCTTCA	58.873	43.478	1.30	0.00	45.28	3.02
9166	10282	4.381411	AGTTACAGTTGGCTGAGTTCTTC	58.619	43.478	1.30	0.00	45.28	2.87
9167	10283	4.141711	TGAGTTACAGTTGGCTGAGTTCTT	60.142	41.667	1.30	0.00	45.28	2.52
9168	10284	3.388024	TGAGTTACAGTTGGCTGAGTTCT	59.612	43.478	1.30	0.00	45.28	3.01
9169	10285	3.728845	TGAGTTACAGTTGGCTGAGTTC	58.271	45.455	1.30	0.00	45.28	3.01
9170	10286	3.388024	TCTGAGTTACAGTTGGCTGAGTT	59.612	43.478	1.30	0.00	45.28	3.01
9171	10287	2.965831	TCTGAGTTACAGTTGGCTGAGT	59.034	45.455	1.30	0.00	45.28	3.41
9172	10288	3.583806	CTCTGAGTTACAGTTGGCTGAG	58.416	50.000	1.30	0.00	45.28	3.35
9173	10289	2.300152	CCTCTGAGTTACAGTTGGCTGA	59.700	50.000	3.66	0.00	45.28	4.26
9174	10290	2.613977	CCCTCTGAGTTACAGTTGGCTG	60.614	54.545	3.66	0.00	45.86	4.85
9175	10291	1.625818	CCCTCTGAGTTACAGTTGGCT	59.374	52.381	3.66	0.00	45.86	4.75
9176	10292	2.100605	CCCTCTGAGTTACAGTTGGC	57.899	55.000	3.66	0.00	45.86	4.52
9177	10293	1.347707	TGCCCTCTGAGTTACAGTTGG	59.652	52.381	3.66	0.00	45.86	3.77
9178	10294	2.224281	TGTGCCCTCTGAGTTACAGTTG	60.224	50.000	3.66	0.00	45.86	3.16
9179	10295	2.047061	TGTGCCCTCTGAGTTACAGTT	58.953	47.619	3.66	0.00	45.86	3.16
9180	10296	1.717032	TGTGCCCTCTGAGTTACAGT	58.283	50.000	3.66	0.00	45.86	3.55
9181	10297	3.449018	ACTATGTGCCCTCTGAGTTACAG	59.551	47.826	3.66	0.00	46.97	2.74
9182	10298	3.195610	CACTATGTGCCCTCTGAGTTACA	59.804	47.826	3.66	6.19	0.00	2.41
9183	10299	3.447586	TCACTATGTGCCCTCTGAGTTAC	59.552	47.826	3.66	0.65	32.98	2.50
9184	10300	3.708451	TCACTATGTGCCCTCTGAGTTA	58.292	45.455	3.66	0.00	32.98	2.24
9185	10301	2.540383	TCACTATGTGCCCTCTGAGTT	58.460	47.619	3.66	0.00	32.98	3.01
9186	10302	2.238084	TCACTATGTGCCCTCTGAGT	57.762	50.000	3.66	0.00	32.98	3.41
9187	10303	2.762887	TCTTCACTATGTGCCCTCTGAG	59.237	50.000	0.00	0.00	32.98	3.35
9188	10304	2.762887	CTCTTCACTATGTGCCCTCTGA	59.237	50.000	0.00	0.00	32.98	3.27
9189	10305	2.741228	GCTCTTCACTATGTGCCCTCTG	60.741	54.545	0.00	0.00	32.98	3.35
9190	10306	1.484240	GCTCTTCACTATGTGCCCTCT	59.516	52.381	0.00	0.00	32.98	3.69
9191	10307	1.804372	CGCTCTTCACTATGTGCCCTC	60.804	57.143	0.00	0.00	32.98	4.30
9192	10308	0.176680	CGCTCTTCACTATGTGCCCT	59.823	55.000	0.00	0.00	32.98	5.19
9193	10309	2.682893	CGCTCTTCACTATGTGCCC	58.317	57.895	0.00	0.00	32.98	5.36

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.