Multiple sequence alignment - TraesCS2B01G246900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G246900 chr2B 100.000 8907 0 0 1 8907 251367622 251376528 0.000000e+00 16449.0
1 TraesCS2B01G246900 chr2B 94.444 558 26 4 1 556 262902986 262903540 0.000000e+00 854.0
2 TraesCS2B01G246900 chr2B 94.097 559 31 2 2 559 793048792 793049349 0.000000e+00 848.0
3 TraesCS2B01G246900 chr2B 94.065 556 29 4 1 555 69364496 69365048 0.000000e+00 841.0
4 TraesCS2B01G246900 chr2B 89.535 86 9 0 8822 8907 496604519 496604434 9.450000e-20 110.0
5 TraesCS2B01G246900 chr2D 96.286 6192 159 27 2084 8222 195289742 195295915 0.000000e+00 10094.0
6 TraesCS2B01G246900 chr2D 96.974 1355 31 4 555 1903 195288399 195289749 0.000000e+00 2266.0
7 TraesCS2B01G246900 chr2D 84.746 236 19 7 8363 8581 195295984 195296219 4.190000e-53 220.0
8 TraesCS2B01G246900 chr2D 84.146 82 13 0 8826 8907 305463210 305463291 7.410000e-11 80.5
9 TraesCS2B01G246900 chr2A 92.318 2200 115 22 4658 6825 210469354 210471531 0.000000e+00 3077.0
10 TraesCS2B01G246900 chr2A 92.778 1800 85 24 6822 8595 210471623 210473403 0.000000e+00 2562.0
11 TraesCS2B01G246900 chr2A 94.624 1581 53 5 2828 4391 210467361 210468926 0.000000e+00 2420.0
12 TraesCS2B01G246900 chr2A 95.554 1372 33 11 556 1903 210465350 210466717 0.000000e+00 2170.0
13 TraesCS2B01G246900 chr2A 92.929 396 22 3 4390 4783 210468960 210469351 1.000000e-158 571.0
14 TraesCS2B01G246900 chr2A 90.811 370 16 9 2382 2734 210466936 210467304 6.260000e-131 479.0
15 TraesCS2B01G246900 chr2A 96.567 233 8 0 2084 2316 210466710 210466942 3.900000e-103 387.0
16 TraesCS2B01G246900 chr2A 97.268 183 5 0 1905 2087 47763571 47763753 2.410000e-80 311.0
17 TraesCS2B01G246900 chr2A 97.268 183 5 0 1905 2087 185123145 185123327 2.410000e-80 311.0
18 TraesCS2B01G246900 chr2A 89.506 162 12 4 7185 7342 715335112 715334952 5.450000e-47 200.0
19 TraesCS2B01G246900 chr2A 88.710 62 7 0 8846 8907 18649899 18649838 9.590000e-10 76.8
20 TraesCS2B01G246900 chr2A 80.220 91 16 2 8714 8804 595242148 595242236 5.770000e-07 67.6
21 TraesCS2B01G246900 chr1B 94.424 556 25 5 1 554 358031782 358031231 0.000000e+00 850.0
22 TraesCS2B01G246900 chr1B 95.789 190 8 0 1898 2087 388768920 388769109 3.120000e-79 307.0
23 TraesCS2B01G246900 chr5A 94.065 556 28 4 1 554 504754819 504754267 0.000000e+00 839.0
24 TraesCS2B01G246900 chr5A 91.304 161 11 3 7185 7342 303399806 303399966 5.420000e-52 217.0
25 TraesCS2B01G246900 chr5A 89.375 160 14 3 7181 7337 660831262 660831103 1.960000e-46 198.0
26 TraesCS2B01G246900 chr5A 88.660 97 10 1 4511 4606 59707885 59707981 5.650000e-22 117.0
27 TraesCS2B01G246900 chr7D 94.065 556 26 7 1 552 114467829 114467277 0.000000e+00 837.0
28 TraesCS2B01G246900 chr7D 88.485 165 16 3 7180 7342 588081940 588081777 7.050000e-46 196.0
29 TraesCS2B01G246900 chr7D 78.866 194 24 4 8714 8907 129822611 129822435 2.030000e-21 115.0
30 TraesCS2B01G246900 chr3B 93.322 569 32 4 1 568 487601000 487600437 0.000000e+00 835.0
31 TraesCS2B01G246900 chr3B 97.268 183 5 0 1905 2087 780293882 780293700 2.410000e-80 311.0
32 TraesCS2B01G246900 chr6D 93.606 563 28 7 1 559 379092900 379093458 0.000000e+00 833.0
33 TraesCS2B01G246900 chr4A 93.885 556 28 5 2 555 137546441 137545890 0.000000e+00 833.0
34 TraesCS2B01G246900 chr4A 97.268 183 5 0 1905 2087 245258104 245257922 2.410000e-80 311.0
35 TraesCS2B01G246900 chr7B 97.268 183 5 0 1905 2087 245176056 245176238 2.410000e-80 311.0
36 TraesCS2B01G246900 chr7B 90.385 156 12 3 7192 7345 700413929 700413775 1.520000e-47 202.0
37 TraesCS2B01G246900 chr5B 97.238 181 5 0 1907 2087 372109030 372108850 3.120000e-79 307.0
38 TraesCS2B01G246900 chr5B 85.437 103 14 1 4514 4616 653842133 653842032 1.220000e-18 106.0
39 TraesCS2B01G246900 chr5B 78.125 160 27 5 8719 8873 544507993 544507837 2.650000e-15 95.3
40 TraesCS2B01G246900 chr3A 96.257 187 7 0 1901 2087 743662281 743662095 3.120000e-79 307.0
41 TraesCS2B01G246900 chr3A 84.071 113 17 1 4504 4616 45876802 45876913 3.400000e-19 108.0
42 TraesCS2B01G246900 chr6A 96.721 183 6 0 1905 2087 531386598 531386416 1.120000e-78 305.0
43 TraesCS2B01G246900 chr6A 88.172 93 11 0 8815 8907 573184080 573184172 2.630000e-20 111.0
44 TraesCS2B01G246900 chr6A 78.912 147 20 10 4508 4653 64259534 64259670 1.230000e-13 89.8
45 TraesCS2B01G246900 chr4B 89.634 164 14 3 7182 7342 78607930 78607767 1.170000e-48 206.0
46 TraesCS2B01G246900 chr7A 88.485 165 16 3 7180 7342 679957181 679957018 7.050000e-46 196.0
47 TraesCS2B01G246900 chrUn 88.496 113 11 2 8714 8825 307101200 307101089 1.560000e-27 135.0
48 TraesCS2B01G246900 chr1D 88.496 113 11 2 8714 8825 462368339 462368450 1.560000e-27 135.0
49 TraesCS2B01G246900 chr3D 93.333 75 5 0 8833 8907 418773678 418773604 2.630000e-20 111.0
50 TraesCS2B01G246900 chr3D 85.542 83 11 1 8826 8907 584046664 584046582 1.590000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G246900 chr2B 251367622 251376528 8906 False 16449.000000 16449 100.000000 1 8907 1 chr2B.!!$F2 8906
1 TraesCS2B01G246900 chr2B 262902986 262903540 554 False 854.000000 854 94.444000 1 556 1 chr2B.!!$F3 555
2 TraesCS2B01G246900 chr2B 793048792 793049349 557 False 848.000000 848 94.097000 2 559 1 chr2B.!!$F4 557
3 TraesCS2B01G246900 chr2B 69364496 69365048 552 False 841.000000 841 94.065000 1 555 1 chr2B.!!$F1 554
4 TraesCS2B01G246900 chr2D 195288399 195296219 7820 False 4193.333333 10094 92.668667 555 8581 3 chr2D.!!$F2 8026
5 TraesCS2B01G246900 chr2A 210465350 210473403 8053 False 1666.571429 3077 93.654429 556 8595 7 chr2A.!!$F4 8039
6 TraesCS2B01G246900 chr1B 358031231 358031782 551 True 850.000000 850 94.424000 1 554 1 chr1B.!!$R1 553
7 TraesCS2B01G246900 chr5A 504754267 504754819 552 True 839.000000 839 94.065000 1 554 1 chr5A.!!$R1 553
8 TraesCS2B01G246900 chr7D 114467277 114467829 552 True 837.000000 837 94.065000 1 552 1 chr7D.!!$R1 551
9 TraesCS2B01G246900 chr3B 487600437 487601000 563 True 835.000000 835 93.322000 1 568 1 chr3B.!!$R1 567
10 TraesCS2B01G246900 chr6D 379092900 379093458 558 False 833.000000 833 93.606000 1 559 1 chr6D.!!$F1 558
11 TraesCS2B01G246900 chr4A 137545890 137546441 551 True 833.000000 833 93.885000 2 555 1 chr4A.!!$R1 553

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
57 59 0.390866 AGAGAGTTGCCATGTGCTCG 60.391 55.000 7.54 0.00 42.00 5.03 F
1994 2022 0.168348 TCAGCTTAGTGTCGACTCGC 59.832 55.000 17.92 11.93 33.21 5.03 F
2027 2055 0.038159 GACTAGTCACAACGCAGGCT 60.038 55.000 18.20 0.00 0.00 4.58 F
2049 2077 0.603975 ACTTCTTCCGAGTTGCTGCC 60.604 55.000 0.00 0.00 0.00 4.85 F
2050 2078 1.301677 CTTCTTCCGAGTTGCTGCCC 61.302 60.000 0.00 0.00 0.00 5.36 F
2752 2809 1.552792 GCTGAGGGCTTGACTTCTAGT 59.447 52.381 0.00 0.00 38.06 2.57 F
2753 2810 2.418060 GCTGAGGGCTTGACTTCTAGTC 60.418 54.545 0.00 0.00 40.67 2.59 F
4577 4709 1.758783 CTTTTCTGACCAAAGCGCAC 58.241 50.000 11.47 0.00 0.00 5.34 F
6275 6548 0.742281 CGAGATGCAAGTGGGACCAG 60.742 60.000 0.00 0.00 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2008 2036 0.038159 AGCCTGCGTTGTGACTAGTC 60.038 55.000 16.32 16.32 0.0 2.59 R
3310 3375 3.012518 ACAGCAGCACATCCTACATTTC 58.987 45.455 0.00 0.00 0.0 2.17 R
3548 3614 3.121194 TGCGCGCAAATTGTTTAACATTC 60.121 39.130 34.66 0.00 0.0 2.67 R
3926 3992 3.181476 GCCAGCCCATTTATTTCGAACAT 60.181 43.478 0.00 0.00 0.0 2.71 R
4219 4316 9.912634 AAAAAGGTGTGATATTTTATGAGTGTG 57.087 29.630 0.00 0.00 0.0 3.82 R
4553 4685 2.712057 CTTTGGTCAGAAAAGCGCAT 57.288 45.000 11.47 0.00 0.0 4.73 R
4933 5191 1.839994 AGGAGATGAATCGAAGCCCAA 59.160 47.619 0.00 0.00 0.0 4.12 R
6592 6873 1.122019 CCCGCTTAGCCCACCTAGAT 61.122 60.000 0.00 0.00 0.0 1.98 R
8147 8556 0.321346 TGCATCGTTGAGGAGCTTGA 59.679 50.000 0.00 0.00 0.0 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 59 0.390866 AGAGAGTTGCCATGTGCTCG 60.391 55.000 7.54 0.00 42.00 5.03
333 339 1.238439 CCCTTGTGCGTGACTGAAAT 58.762 50.000 0.00 0.00 0.00 2.17
363 369 1.644786 GCGAACTGCTAAACGCCCAT 61.645 55.000 0.00 0.00 44.27 4.00
370 376 0.741927 GCTAAACGCCCATACACCGT 60.742 55.000 0.00 0.00 36.68 4.83
374 380 3.467226 CGCCCATACACCGTCCCT 61.467 66.667 0.00 0.00 0.00 4.20
409 415 0.608640 GGATGTGTGGACGACCTCTT 59.391 55.000 5.33 0.00 37.04 2.85
411 417 2.069273 GATGTGTGGACGACCTCTTTG 58.931 52.381 5.33 0.00 37.04 2.77
478 484 5.470098 AGCTAATTTGTGTCAAGATTCGTGT 59.530 36.000 0.00 0.00 0.00 4.49
518 524 1.669440 GAGGCGTGTGGGTGAGTTA 59.331 57.895 0.00 0.00 0.00 2.24
520 526 1.119574 AGGCGTGTGGGTGAGTTAGT 61.120 55.000 0.00 0.00 0.00 2.24
669 689 0.989602 AGTACTAACAAGGTGGCCCC 59.010 55.000 0.00 0.03 0.00 5.80
792 812 2.122167 GCGAGAGATCCCACCGTCT 61.122 63.158 0.00 0.00 0.00 4.18
901 921 0.684153 CCACCGGATGCCTCCAATTT 60.684 55.000 9.46 0.00 42.19 1.82
991 1011 1.153168 CCAGATTCCCCACGCGAAT 60.153 57.895 15.93 0.02 32.62 3.34
1047 1073 3.716195 CATCCCAGGTCGCCCACA 61.716 66.667 0.00 0.00 0.00 4.17
1878 1906 0.322816 TTGTTGGAGATGGCTGCCTC 60.323 55.000 21.03 14.30 0.00 4.70
1898 1926 3.305720 TCTCTGTATTGGCTAATCCCGT 58.694 45.455 0.00 0.00 0.00 5.28
1899 1927 4.476297 TCTCTGTATTGGCTAATCCCGTA 58.524 43.478 0.00 0.00 0.00 4.02
1900 1928 4.897076 TCTCTGTATTGGCTAATCCCGTAA 59.103 41.667 0.00 0.00 0.00 3.18
1901 1929 5.542635 TCTCTGTATTGGCTAATCCCGTAAT 59.457 40.000 0.00 0.00 0.00 1.89
1902 1930 5.790593 TCTGTATTGGCTAATCCCGTAATC 58.209 41.667 0.00 0.00 0.00 1.75
1903 1931 4.562082 TGTATTGGCTAATCCCGTAATCG 58.438 43.478 0.00 0.00 0.00 3.34
1904 1932 3.764237 ATTGGCTAATCCCGTAATCGT 57.236 42.857 0.00 0.00 35.01 3.73
1905 1933 2.519377 TGGCTAATCCCGTAATCGTG 57.481 50.000 0.00 0.00 35.01 4.35
1906 1934 1.069513 TGGCTAATCCCGTAATCGTGG 59.930 52.381 0.00 0.00 35.01 4.94
1907 1935 1.342174 GGCTAATCCCGTAATCGTGGA 59.658 52.381 0.00 0.00 39.38 4.02
1908 1936 2.028385 GGCTAATCCCGTAATCGTGGAT 60.028 50.000 0.00 0.00 43.49 3.41
1910 1938 4.062991 GCTAATCCCGTAATCGTGGATTT 58.937 43.478 19.53 10.35 45.41 2.17
1911 1939 4.151867 GCTAATCCCGTAATCGTGGATTTC 59.848 45.833 19.53 12.72 45.41 2.17
1912 1940 2.212869 TCCCGTAATCGTGGATTTCG 57.787 50.000 9.48 9.48 40.61 3.46
1913 1941 1.750206 TCCCGTAATCGTGGATTTCGA 59.250 47.619 15.73 0.00 42.44 3.71
1914 1942 2.124903 CCCGTAATCGTGGATTTCGAG 58.875 52.381 15.73 2.62 42.44 4.04
1915 1943 2.480759 CCCGTAATCGTGGATTTCGAGT 60.481 50.000 15.73 0.00 42.44 4.18
1916 1944 2.787680 CCGTAATCGTGGATTTCGAGTC 59.212 50.000 15.73 0.00 42.44 3.36
1917 1945 3.431856 CGTAATCGTGGATTTCGAGTCA 58.568 45.455 10.56 0.00 42.44 3.41
1918 1946 3.239941 CGTAATCGTGGATTTCGAGTCAC 59.760 47.826 10.56 2.00 42.44 3.67
1919 1947 3.594603 AATCGTGGATTTCGAGTCACT 57.405 42.857 2.86 0.00 40.57 3.41
1920 1948 2.631418 TCGTGGATTTCGAGTCACTC 57.369 50.000 0.00 0.00 33.38 3.51
1921 1949 4.729746 TAATCGTGGATTTCGAGTCACTCG 60.730 45.833 21.74 21.74 42.32 4.18
1961 1989 5.798015 GACGACTAGTCTATGAGTCACAA 57.202 43.478 20.34 0.00 46.13 3.33
1962 1990 6.179504 GACGACTAGTCTATGAGTCACAAA 57.820 41.667 20.34 0.00 46.13 2.83
1963 1991 6.570672 ACGACTAGTCTATGAGTCACAAAA 57.429 37.500 20.34 0.00 41.87 2.44
1964 1992 6.978338 ACGACTAGTCTATGAGTCACAAAAA 58.022 36.000 20.34 0.00 41.87 1.94
1965 1993 7.603651 ACGACTAGTCTATGAGTCACAAAAAT 58.396 34.615 20.34 0.00 41.87 1.82
1966 1994 8.737175 ACGACTAGTCTATGAGTCACAAAAATA 58.263 33.333 20.34 0.00 41.87 1.40
1967 1995 9.737427 CGACTAGTCTATGAGTCACAAAAATAT 57.263 33.333 20.34 0.00 41.87 1.28
1969 1997 9.823647 ACTAGTCTATGAGTCACAAAAATATGG 57.176 33.333 0.00 0.00 0.00 2.74
1970 1998 9.823647 CTAGTCTATGAGTCACAAAAATATGGT 57.176 33.333 0.00 0.00 0.00 3.55
1971 1999 8.723942 AGTCTATGAGTCACAAAAATATGGTC 57.276 34.615 0.00 0.00 0.00 4.02
1972 2000 7.492669 AGTCTATGAGTCACAAAAATATGGTCG 59.507 37.037 0.00 0.00 0.00 4.79
1973 2001 7.491372 GTCTATGAGTCACAAAAATATGGTCGA 59.509 37.037 0.00 0.00 0.00 4.20
1974 2002 5.856126 TGAGTCACAAAAATATGGTCGAC 57.144 39.130 7.13 7.13 0.00 4.20
1975 2003 5.547465 TGAGTCACAAAAATATGGTCGACT 58.453 37.500 16.46 0.00 35.29 4.18
1976 2004 5.637810 TGAGTCACAAAAATATGGTCGACTC 59.362 40.000 16.46 6.30 45.26 3.36
1977 2005 5.547465 AGTCACAAAAATATGGTCGACTCA 58.453 37.500 16.46 12.14 0.00 3.41
1978 2006 5.639506 AGTCACAAAAATATGGTCGACTCAG 59.360 40.000 16.46 1.28 0.00 3.35
1979 2007 4.391830 TCACAAAAATATGGTCGACTCAGC 59.608 41.667 16.46 0.00 0.00 4.26
1980 2008 4.393062 CACAAAAATATGGTCGACTCAGCT 59.607 41.667 16.46 0.87 0.00 4.24
1981 2009 5.003804 ACAAAAATATGGTCGACTCAGCTT 58.996 37.500 16.46 6.75 0.00 3.74
1982 2010 6.092122 CACAAAAATATGGTCGACTCAGCTTA 59.908 38.462 16.46 1.81 0.00 3.09
1983 2011 6.313905 ACAAAAATATGGTCGACTCAGCTTAG 59.686 38.462 16.46 0.00 0.00 2.18
1984 2012 5.599999 AAATATGGTCGACTCAGCTTAGT 57.400 39.130 16.46 0.00 0.00 2.24
1985 2013 2.949451 ATGGTCGACTCAGCTTAGTG 57.051 50.000 16.46 0.00 0.00 2.74
1986 2014 1.617322 TGGTCGACTCAGCTTAGTGT 58.383 50.000 16.46 0.00 0.00 3.55
1987 2015 1.540267 TGGTCGACTCAGCTTAGTGTC 59.460 52.381 16.46 0.80 0.00 3.67
1992 2020 3.125698 GACTCAGCTTAGTGTCGACTC 57.874 52.381 17.92 13.63 33.21 3.36
1993 2021 1.465387 ACTCAGCTTAGTGTCGACTCG 59.535 52.381 17.92 1.95 33.21 4.18
1994 2022 0.168348 TCAGCTTAGTGTCGACTCGC 59.832 55.000 17.92 11.93 33.21 5.03
1995 2023 1.128724 CAGCTTAGTGTCGACTCGCG 61.129 60.000 17.92 0.00 42.69 5.87
2003 2031 2.861006 TCGACTCGCGACACTGAG 59.139 61.111 3.71 0.00 45.59 3.35
2013 2041 3.589639 GACACTGAGTCGCGACTAG 57.410 57.895 39.33 32.67 42.66 2.57
2014 2042 0.797542 GACACTGAGTCGCGACTAGT 59.202 55.000 39.33 33.24 42.66 2.57
2015 2043 0.797542 ACACTGAGTCGCGACTAGTC 59.202 55.000 39.33 27.50 42.66 2.59
2016 2044 0.796927 CACTGAGTCGCGACTAGTCA 59.203 55.000 39.33 30.22 42.66 3.41
2017 2045 0.797542 ACTGAGTCGCGACTAGTCAC 59.202 55.000 39.33 26.64 42.66 3.67
2018 2046 0.796927 CTGAGTCGCGACTAGTCACA 59.203 55.000 39.33 29.42 42.66 3.58
2019 2047 1.197036 CTGAGTCGCGACTAGTCACAA 59.803 52.381 39.33 18.16 42.66 3.33
2020 2048 1.069432 TGAGTCGCGACTAGTCACAAC 60.069 52.381 39.33 24.54 42.66 3.32
2021 2049 0.110328 AGTCGCGACTAGTCACAACG 60.110 55.000 38.67 18.08 40.43 4.10
2022 2050 1.441515 TCGCGACTAGTCACAACGC 60.442 57.895 22.37 17.95 44.64 4.84
2023 2051 4.238385 GCGACTAGTCACAACGCA 57.762 55.556 22.37 0.00 46.75 5.24
2024 2052 2.062779 GCGACTAGTCACAACGCAG 58.937 57.895 22.37 4.87 46.75 5.18
2025 2053 1.344942 GCGACTAGTCACAACGCAGG 61.345 60.000 22.37 4.17 46.75 4.85
2026 2054 1.344942 CGACTAGTCACAACGCAGGC 61.345 60.000 22.37 0.00 0.00 4.85
2027 2055 0.038159 GACTAGTCACAACGCAGGCT 60.038 55.000 18.20 0.00 0.00 4.58
2028 2056 0.038159 ACTAGTCACAACGCAGGCTC 60.038 55.000 0.00 0.00 0.00 4.70
2029 2057 1.073216 CTAGTCACAACGCAGGCTCG 61.073 60.000 5.08 5.08 0.00 5.03
2030 2058 1.520600 TAGTCACAACGCAGGCTCGA 61.521 55.000 12.16 0.00 0.00 4.04
2031 2059 2.355837 TCACAACGCAGGCTCGAC 60.356 61.111 12.16 0.00 0.00 4.20
2032 2060 2.356313 CACAACGCAGGCTCGACT 60.356 61.111 12.16 0.00 0.00 4.18
2033 2061 1.956170 CACAACGCAGGCTCGACTT 60.956 57.895 12.16 0.00 0.00 3.01
2034 2062 1.664965 ACAACGCAGGCTCGACTTC 60.665 57.895 12.16 0.00 0.00 3.01
2035 2063 1.373497 CAACGCAGGCTCGACTTCT 60.373 57.895 12.16 0.00 0.00 2.85
2036 2064 0.946221 CAACGCAGGCTCGACTTCTT 60.946 55.000 12.16 0.00 0.00 2.52
2037 2065 0.667792 AACGCAGGCTCGACTTCTTC 60.668 55.000 12.16 0.00 0.00 2.87
2038 2066 1.807573 CGCAGGCTCGACTTCTTCC 60.808 63.158 0.91 0.00 0.00 3.46
2039 2067 1.807573 GCAGGCTCGACTTCTTCCG 60.808 63.158 0.00 0.00 0.00 4.30
2040 2068 1.883732 CAGGCTCGACTTCTTCCGA 59.116 57.895 0.00 0.00 0.00 4.55
2045 2073 1.341606 CTCGACTTCTTCCGAGTTGC 58.658 55.000 0.00 0.00 44.99 4.17
2046 2074 0.959553 TCGACTTCTTCCGAGTTGCT 59.040 50.000 0.00 0.00 0.00 3.91
2047 2075 1.063806 CGACTTCTTCCGAGTTGCTG 58.936 55.000 0.00 0.00 0.00 4.41
2048 2076 0.793250 GACTTCTTCCGAGTTGCTGC 59.207 55.000 0.00 0.00 0.00 5.25
2049 2077 0.603975 ACTTCTTCCGAGTTGCTGCC 60.604 55.000 0.00 0.00 0.00 4.85
2050 2078 1.301677 CTTCTTCCGAGTTGCTGCCC 61.302 60.000 0.00 0.00 0.00 5.36
2051 2079 2.747855 CTTCCGAGTTGCTGCCCC 60.748 66.667 0.00 0.00 0.00 5.80
2052 2080 3.551496 CTTCCGAGTTGCTGCCCCA 62.551 63.158 0.00 0.00 0.00 4.96
2053 2081 3.551496 TTCCGAGTTGCTGCCCCAG 62.551 63.158 0.00 0.00 34.12 4.45
2054 2082 4.020617 CCGAGTTGCTGCCCCAGA 62.021 66.667 0.00 0.00 32.44 3.86
2055 2083 2.435586 CGAGTTGCTGCCCCAGAG 60.436 66.667 0.00 0.00 32.44 3.35
2056 2084 2.749441 GAGTTGCTGCCCCAGAGC 60.749 66.667 0.00 0.00 36.95 4.09
2057 2085 4.711949 AGTTGCTGCCCCAGAGCG 62.712 66.667 0.00 0.00 39.47 5.03
2058 2086 4.704833 GTTGCTGCCCCAGAGCGA 62.705 66.667 0.00 0.00 39.47 4.93
2059 2087 4.704833 TTGCTGCCCCAGAGCGAC 62.705 66.667 0.00 0.00 39.47 5.19
2061 2089 4.828925 GCTGCCCCAGAGCGACTC 62.829 72.222 0.00 0.00 32.44 3.36
2062 2090 4.504916 CTGCCCCAGAGCGACTCG 62.505 72.222 0.00 0.00 35.36 4.18
2235 2263 9.841880 GGATGGAAATACTAGTGTTTTCTTTTC 57.158 33.333 20.36 14.78 31.57 2.29
2256 2284 6.801539 TTCTCTGCTGTAAAGTATTTGTGG 57.198 37.500 0.00 0.00 39.63 4.17
2291 2319 9.231297 CAAGAGAATGGACTACTATTTTGGAAA 57.769 33.333 0.00 0.00 0.00 3.13
2346 2375 5.129320 GGTGGATCTTTGGCATTTATTTCCT 59.871 40.000 0.00 0.00 0.00 3.36
2451 2480 8.678199 GCAGTTAGGATTAAAGCTTCAAATAGT 58.322 33.333 0.00 0.00 0.00 2.12
2619 2656 4.520874 TCATGTACCAGCTGAGACTATAGC 59.479 45.833 17.39 3.56 40.18 2.97
2752 2809 1.552792 GCTGAGGGCTTGACTTCTAGT 59.447 52.381 0.00 0.00 38.06 2.57
2753 2810 2.418060 GCTGAGGGCTTGACTTCTAGTC 60.418 54.545 0.00 0.00 40.67 2.59
2754 2811 3.096092 CTGAGGGCTTGACTTCTAGTCT 58.904 50.000 8.18 0.00 45.27 3.24
2755 2812 4.274147 CTGAGGGCTTGACTTCTAGTCTA 58.726 47.826 8.18 0.30 45.27 2.59
2756 2813 4.274147 TGAGGGCTTGACTTCTAGTCTAG 58.726 47.826 12.06 12.06 46.20 2.43
2827 2892 4.413520 ACTGATATTACCAGGCTCCAATGT 59.586 41.667 0.00 0.00 36.03 2.71
3004 3069 9.187996 TCTTTCTGCATATTTCATAAATCACCA 57.812 29.630 0.00 0.00 32.38 4.17
3310 3375 8.792830 ATAAATAATCCACCTCACAATATCGG 57.207 34.615 0.00 0.00 0.00 4.18
3344 3409 3.622612 GTGCTGCTGTTCCATTTGTTTTT 59.377 39.130 0.00 0.00 0.00 1.94
3350 3415 6.815089 TGCTGTTCCATTTGTTTTTAGATGT 58.185 32.000 0.00 0.00 0.00 3.06
3499 3564 8.764287 CAAATGGTATCAACCTTTTCTTTTGTC 58.236 33.333 5.68 0.00 45.33 3.18
3526 3591 5.664006 ACAAGTGCATGGTATTACTAGGGTA 59.336 40.000 0.00 0.00 0.00 3.69
3648 3714 4.774200 AGCAATAATGAGAAAGCAAAGGGT 59.226 37.500 0.00 0.00 0.00 4.34
3926 3992 4.000988 CGGGCTAGCTCTAGTTTTCAAAA 58.999 43.478 13.91 0.00 35.65 2.44
4219 4316 7.793902 TGATTCGTTCTTTTACTTCTAACTGC 58.206 34.615 0.00 0.00 0.00 4.40
4223 4320 6.019318 TCGTTCTTTTACTTCTAACTGCACAC 60.019 38.462 0.00 0.00 0.00 3.82
4263 4360 7.064966 CACCTTTTTAATTTCCAGATTGATGGC 59.935 37.037 0.00 0.00 40.41 4.40
4281 4378 5.716228 TGATGGCAGGAAAAATACATTCTGT 59.284 36.000 0.00 0.00 0.00 3.41
4484 4616 7.772332 ATACTGTTGGATGTAAAATCGACTC 57.228 36.000 0.00 0.00 0.00 3.36
4512 4644 9.927668 ATTTACAGTCATTTCGGATCAAAATTT 57.072 25.926 0.00 0.00 0.00 1.82
4553 4685 2.755876 TGTGTTTTGCCACCGCCA 60.756 55.556 0.00 0.00 34.35 5.69
4577 4709 1.758783 CTTTTCTGACCAAAGCGCAC 58.241 50.000 11.47 0.00 0.00 5.34
4933 5191 0.765510 GAGAGGTGGTGGTTCAACCT 59.234 55.000 8.40 0.00 41.16 3.50
4992 5250 7.186804 CGAAATACAATGGGTTTCATGAGTAC 58.813 38.462 11.26 0.00 35.99 2.73
5001 5259 7.252612 TGGGTTTCATGAGTACTCTAATTCA 57.747 36.000 23.01 3.56 0.00 2.57
5125 5383 4.776435 TCTGAGCAATGGGATTCATACA 57.224 40.909 0.00 0.00 34.44 2.29
5304 5562 1.919600 GAAGTGCATGGAGGGCCTCT 61.920 60.000 31.39 11.70 34.31 3.69
5465 5723 2.722201 GGGAATCCTGGACTCGCGT 61.722 63.158 5.77 0.00 0.00 6.01
5686 5944 2.290071 TGGCTTCAGCAGGTAAACTACC 60.290 50.000 0.30 0.00 44.36 3.18
5754 6019 6.708949 GGGATGTTTGTAGACTTAGTGACAAA 59.291 38.462 14.47 14.47 38.97 2.83
5938 6208 7.928908 TTGTTCTTCACTGAAAATTGCATAC 57.071 32.000 0.00 0.00 0.00 2.39
6124 6395 9.959721 TCTGCCTAGTATATTTTCCAATATTCC 57.040 33.333 0.00 0.00 36.95 3.01
6275 6548 0.742281 CGAGATGCAAGTGGGACCAG 60.742 60.000 0.00 0.00 0.00 4.00
6339 6613 7.823745 ATAATATTCCAAAAACCTCATCGCT 57.176 32.000 0.00 0.00 0.00 4.93
6384 6665 3.567579 TAGGCCTTGTGCACCTGGC 62.568 63.158 30.44 30.44 43.89 4.85
6451 6732 7.338196 TGAATACGATTTGGTATTGGTGAATGT 59.662 33.333 3.14 0.00 41.79 2.71
6523 6804 6.146347 GGAAGTTAGACGATCAATCAATAGCC 59.854 42.308 0.00 0.00 0.00 3.93
6528 6809 6.019779 AGACGATCAATCAATAGCCTCTAC 57.980 41.667 0.00 0.00 0.00 2.59
6554 6835 3.942748 TCAACCAGTGTTCTAAAAAGCGT 59.057 39.130 0.00 0.00 30.42 5.07
6592 6873 7.013559 CAGCCATAATGATGACACCTAAATCAA 59.986 37.037 0.00 0.00 34.21 2.57
6701 6982 5.068723 CCGTCAATAACTATGTACTCCCACT 59.931 44.000 0.00 0.00 0.00 4.00
6724 7005 2.086869 CCCAGTTTATGTGGCACTCAG 58.913 52.381 19.83 1.90 34.48 3.35
6726 7007 3.005554 CCAGTTTATGTGGCACTCAGAG 58.994 50.000 19.83 0.00 34.48 3.35
6787 7080 4.265893 TGCGCTAGAAAAATCATACCCAA 58.734 39.130 9.73 0.00 0.00 4.12
6890 7289 8.892723 TGACTGGTTATTATTGATCACATTGAC 58.107 33.333 0.00 0.00 0.00 3.18
6959 7358 5.359009 AGAGGTAGTAATTAGCTACGCAACA 59.641 40.000 13.99 0.00 40.11 3.33
7093 7496 5.441718 TCATTTGGTCTAGAATGAAGGCT 57.558 39.130 0.00 0.00 38.82 4.58
7127 7530 4.225942 ACTGGATTGCTACAAGGAAGATCA 59.774 41.667 0.00 0.00 0.00 2.92
7389 7793 9.758651 AGTACAGATAACATTTAATATGTCGCA 57.241 29.630 0.00 0.00 30.67 5.10
7452 7856 6.837312 AGCCAATGCAGTACCATAACTTATA 58.163 36.000 0.00 0.00 41.13 0.98
7549 7953 5.341872 TTTACTAAACGGTAGGCAGCATA 57.658 39.130 0.00 0.00 0.00 3.14
7560 7964 1.745087 AGGCAGCATATTGGTCAAACG 59.255 47.619 0.00 0.00 0.00 3.60
7625 8029 2.960384 TGTGTACTCAGAAGTCGGGAAA 59.040 45.455 0.00 0.00 36.92 3.13
7631 8035 3.640029 ACTCAGAAGTCGGGAAACTTACA 59.360 43.478 0.00 0.00 39.55 2.41
7697 8102 6.515272 ACTTGTGTAAATCATGATTGTCCC 57.485 37.500 21.39 10.73 0.00 4.46
7726 8131 3.515104 TGATGCAGTTGACTGATCTGGTA 59.485 43.478 14.98 0.00 46.59 3.25
7741 8146 6.914665 TGATCTGGTAATGGAAAATGGATCT 58.085 36.000 0.00 0.00 0.00 2.75
7768 8173 0.104855 TTGGAATCCCTCGAGATGCG 59.895 55.000 15.71 0.00 42.69 4.73
8026 8431 2.066999 GGGAGCGGAGGAGTGGAAT 61.067 63.158 0.00 0.00 0.00 3.01
8147 8556 1.679311 TGAGGCATCTCAGCGGTTT 59.321 52.632 0.00 0.00 44.39 3.27
8269 8678 1.151668 GCAAGACGATGCACTCAACT 58.848 50.000 0.00 0.00 45.70 3.16
8305 8714 2.216898 CTCCATTCCGAAGCCTCATTC 58.783 52.381 0.00 0.00 0.00 2.67
8390 8799 4.524714 AGTGTTAGGATGATACATCCTCCG 59.475 45.833 28.90 0.00 44.86 4.63
8427 8841 2.963371 GTCGTTCTCACGGCCTCT 59.037 61.111 0.00 0.00 45.75 3.69
8439 8865 0.539051 CGGCCTCTCTGAGAAACCAT 59.461 55.000 19.85 0.00 0.00 3.55
8456 8883 3.376935 ATGGTCCCTTGCTCGCTCG 62.377 63.158 0.00 0.00 0.00 5.03
8457 8884 3.760035 GGTCCCTTGCTCGCTCGA 61.760 66.667 0.00 0.00 0.00 4.04
8517 8946 0.659957 GATGCGAGCATCTTTCCACC 59.340 55.000 25.66 2.64 46.67 4.61
8557 8986 2.678336 CCCGGTTTGAGAATGCTTAGAC 59.322 50.000 0.00 0.00 0.00 2.59
8564 8993 3.849911 TGAGAATGCTTAGACCAACTCG 58.150 45.455 0.00 0.00 0.00 4.18
8572 9001 2.807631 TAGACCAACTCGAACGCGCC 62.808 60.000 5.73 0.00 37.46 6.53
8581 9010 3.428282 GAACGCGCCGACCCAAAT 61.428 61.111 5.73 0.00 0.00 2.32
8582 9011 2.047083 AACGCGCCGACCCAAATA 60.047 55.556 5.73 0.00 0.00 1.40
8583 9012 1.637478 GAACGCGCCGACCCAAATAA 61.637 55.000 5.73 0.00 0.00 1.40
8584 9013 1.641123 AACGCGCCGACCCAAATAAG 61.641 55.000 5.73 0.00 0.00 1.73
8585 9014 2.819552 CGCGCCGACCCAAATAAGG 61.820 63.158 0.00 0.00 0.00 2.69
8586 9015 1.450669 GCGCCGACCCAAATAAGGA 60.451 57.895 0.00 0.00 0.00 3.36
8587 9016 0.818040 GCGCCGACCCAAATAAGGAT 60.818 55.000 0.00 0.00 0.00 3.24
8588 9017 1.541670 GCGCCGACCCAAATAAGGATA 60.542 52.381 0.00 0.00 0.00 2.59
8589 9018 2.413837 CGCCGACCCAAATAAGGATAG 58.586 52.381 0.00 0.00 0.00 2.08
8590 9019 2.152016 GCCGACCCAAATAAGGATAGC 58.848 52.381 0.00 0.00 0.00 2.97
8591 9020 2.486548 GCCGACCCAAATAAGGATAGCA 60.487 50.000 0.00 0.00 0.00 3.49
8592 9021 3.815809 CCGACCCAAATAAGGATAGCAA 58.184 45.455 0.00 0.00 0.00 3.91
8593 9022 4.398319 CCGACCCAAATAAGGATAGCAAT 58.602 43.478 0.00 0.00 0.00 3.56
8594 9023 4.216257 CCGACCCAAATAAGGATAGCAATG 59.784 45.833 0.00 0.00 0.00 2.82
8595 9024 5.063204 CGACCCAAATAAGGATAGCAATGA 58.937 41.667 0.00 0.00 0.00 2.57
8596 9025 5.180117 CGACCCAAATAAGGATAGCAATGAG 59.820 44.000 0.00 0.00 0.00 2.90
8597 9026 6.018433 ACCCAAATAAGGATAGCAATGAGT 57.982 37.500 0.00 0.00 0.00 3.41
8598 9027 7.149202 ACCCAAATAAGGATAGCAATGAGTA 57.851 36.000 0.00 0.00 0.00 2.59
8599 9028 7.227156 ACCCAAATAAGGATAGCAATGAGTAG 58.773 38.462 0.00 0.00 0.00 2.57
8600 9029 6.656693 CCCAAATAAGGATAGCAATGAGTAGG 59.343 42.308 0.00 0.00 0.00 3.18
8601 9030 7.227156 CCAAATAAGGATAGCAATGAGTAGGT 58.773 38.462 0.00 0.00 0.00 3.08
8602 9031 7.173907 CCAAATAAGGATAGCAATGAGTAGGTG 59.826 40.741 0.00 0.00 0.00 4.00
8603 9032 3.760580 AGGATAGCAATGAGTAGGTGC 57.239 47.619 0.00 0.00 38.59 5.01
8604 9033 2.370189 AGGATAGCAATGAGTAGGTGCC 59.630 50.000 0.00 0.00 39.13 5.01
8605 9034 2.408050 GATAGCAATGAGTAGGTGCCG 58.592 52.381 0.00 0.00 39.13 5.69
8606 9035 1.480789 TAGCAATGAGTAGGTGCCGA 58.519 50.000 0.00 0.00 39.13 5.54
8607 9036 0.108138 AGCAATGAGTAGGTGCCGAC 60.108 55.000 0.00 0.00 39.13 4.79
8627 9056 3.960102 GACCCAAATAAGGATGGCAATGA 59.040 43.478 0.00 0.00 35.28 2.57
8628 9057 3.962718 ACCCAAATAAGGATGGCAATGAG 59.037 43.478 0.00 0.00 35.28 2.90
8629 9058 3.962718 CCCAAATAAGGATGGCAATGAGT 59.037 43.478 0.00 0.00 35.28 3.41
8630 9059 5.139727 CCCAAATAAGGATGGCAATGAGTA 58.860 41.667 0.00 0.00 35.28 2.59
8631 9060 5.242393 CCCAAATAAGGATGGCAATGAGTAG 59.758 44.000 0.00 0.00 35.28 2.57
8632 9061 5.242393 CCAAATAAGGATGGCAATGAGTAGG 59.758 44.000 0.00 0.00 0.00 3.18
8633 9062 5.912149 AATAAGGATGGCAATGAGTAGGA 57.088 39.130 0.00 0.00 0.00 2.94
8634 9063 6.460103 AATAAGGATGGCAATGAGTAGGAT 57.540 37.500 0.00 0.00 0.00 3.24
8635 9064 7.574021 AATAAGGATGGCAATGAGTAGGATA 57.426 36.000 0.00 0.00 0.00 2.59
8636 9065 7.761981 ATAAGGATGGCAATGAGTAGGATAT 57.238 36.000 0.00 0.00 0.00 1.63
8637 9066 5.432680 AGGATGGCAATGAGTAGGATATG 57.567 43.478 0.00 0.00 0.00 1.78
8638 9067 4.226846 AGGATGGCAATGAGTAGGATATGG 59.773 45.833 0.00 0.00 0.00 2.74
8639 9068 4.018960 GGATGGCAATGAGTAGGATATGGT 60.019 45.833 0.00 0.00 0.00 3.55
8640 9069 4.623932 TGGCAATGAGTAGGATATGGTC 57.376 45.455 0.00 0.00 0.00 4.02
8641 9070 3.973305 TGGCAATGAGTAGGATATGGTCA 59.027 43.478 0.00 0.00 0.00 4.02
8642 9071 4.040829 TGGCAATGAGTAGGATATGGTCAG 59.959 45.833 0.00 0.00 0.00 3.51
8643 9072 3.999663 GCAATGAGTAGGATATGGTCAGC 59.000 47.826 0.00 0.00 0.00 4.26
8644 9073 4.503817 GCAATGAGTAGGATATGGTCAGCA 60.504 45.833 0.00 0.00 0.00 4.41
8645 9074 5.802465 CAATGAGTAGGATATGGTCAGCAT 58.198 41.667 0.00 0.00 0.00 3.79
8646 9075 6.575056 GCAATGAGTAGGATATGGTCAGCATA 60.575 42.308 0.00 0.00 0.00 3.14
8647 9076 6.788598 ATGAGTAGGATATGGTCAGCATAG 57.211 41.667 2.46 0.00 0.00 2.23
8648 9077 5.892348 TGAGTAGGATATGGTCAGCATAGA 58.108 41.667 2.46 0.00 0.00 1.98
8649 9078 5.948758 TGAGTAGGATATGGTCAGCATAGAG 59.051 44.000 2.46 0.00 0.00 2.43
8650 9079 4.709397 AGTAGGATATGGTCAGCATAGAGC 59.291 45.833 2.46 0.00 46.19 4.09
8663 9092 4.286297 GCATAGAGCAATACCATACCCA 57.714 45.455 0.00 0.00 44.79 4.51
8664 9093 4.848357 GCATAGAGCAATACCATACCCAT 58.152 43.478 0.00 0.00 44.79 4.00
8665 9094 5.989477 GCATAGAGCAATACCATACCCATA 58.011 41.667 0.00 0.00 44.79 2.74
8666 9095 6.595682 GCATAGAGCAATACCATACCCATAT 58.404 40.000 0.00 0.00 44.79 1.78
8667 9096 7.735917 GCATAGAGCAATACCATACCCATATA 58.264 38.462 0.00 0.00 44.79 0.86
8668 9097 7.875041 GCATAGAGCAATACCATACCCATATAG 59.125 40.741 0.00 0.00 44.79 1.31
8669 9098 8.928448 CATAGAGCAATACCATACCCATATAGT 58.072 37.037 0.00 0.00 0.00 2.12
8670 9099 7.425224 AGAGCAATACCATACCCATATAGTC 57.575 40.000 0.00 0.00 0.00 2.59
8671 9100 6.959954 AGAGCAATACCATACCCATATAGTCA 59.040 38.462 0.00 0.00 0.00 3.41
8672 9101 7.457852 AGAGCAATACCATACCCATATAGTCAA 59.542 37.037 0.00 0.00 0.00 3.18
8673 9102 7.624549 AGCAATACCATACCCATATAGTCAAG 58.375 38.462 0.00 0.00 0.00 3.02
8674 9103 6.316390 GCAATACCATACCCATATAGTCAAGC 59.684 42.308 0.00 0.00 0.00 4.01
8675 9104 7.394016 CAATACCATACCCATATAGTCAAGCA 58.606 38.462 0.00 0.00 0.00 3.91
8676 9105 5.904984 ACCATACCCATATAGTCAAGCAA 57.095 39.130 0.00 0.00 0.00 3.91
8677 9106 6.454223 ACCATACCCATATAGTCAAGCAAT 57.546 37.500 0.00 0.00 0.00 3.56
8678 9107 7.568128 ACCATACCCATATAGTCAAGCAATA 57.432 36.000 0.00 0.00 0.00 1.90
8679 9108 7.394816 ACCATACCCATATAGTCAAGCAATAC 58.605 38.462 0.00 0.00 0.00 1.89
8680 9109 6.823689 CCATACCCATATAGTCAAGCAATACC 59.176 42.308 0.00 0.00 0.00 2.73
8681 9110 5.904984 ACCCATATAGTCAAGCAATACCA 57.095 39.130 0.00 0.00 0.00 3.25
8682 9111 6.454223 ACCCATATAGTCAAGCAATACCAT 57.546 37.500 0.00 0.00 0.00 3.55
8683 9112 7.568128 ACCCATATAGTCAAGCAATACCATA 57.432 36.000 0.00 0.00 0.00 2.74
8684 9113 7.394816 ACCCATATAGTCAAGCAATACCATAC 58.605 38.462 0.00 0.00 0.00 2.39
8685 9114 6.823689 CCCATATAGTCAAGCAATACCATACC 59.176 42.308 0.00 0.00 0.00 2.73
8686 9115 6.823689 CCATATAGTCAAGCAATACCATACCC 59.176 42.308 0.00 0.00 0.00 3.69
8687 9116 5.904984 ATAGTCAAGCAATACCATACCCA 57.095 39.130 0.00 0.00 0.00 4.51
8688 9117 3.886123 AGTCAAGCAATACCATACCCAC 58.114 45.455 0.00 0.00 0.00 4.61
8689 9118 3.265737 AGTCAAGCAATACCATACCCACA 59.734 43.478 0.00 0.00 0.00 4.17
8690 9119 4.079787 AGTCAAGCAATACCATACCCACAT 60.080 41.667 0.00 0.00 0.00 3.21
8691 9120 5.131977 AGTCAAGCAATACCATACCCACATA 59.868 40.000 0.00 0.00 0.00 2.29
8692 9121 5.470098 GTCAAGCAATACCATACCCACATAG 59.530 44.000 0.00 0.00 0.00 2.23
8693 9122 5.131977 TCAAGCAATACCATACCCACATAGT 59.868 40.000 0.00 0.00 0.00 2.12
8694 9123 5.228945 AGCAATACCATACCCACATAGTC 57.771 43.478 0.00 0.00 0.00 2.59
8695 9124 4.658435 AGCAATACCATACCCACATAGTCA 59.342 41.667 0.00 0.00 0.00 3.41
8696 9125 4.997395 GCAATACCATACCCACATAGTCAG 59.003 45.833 0.00 0.00 0.00 3.51
8697 9126 5.221641 GCAATACCATACCCACATAGTCAGA 60.222 44.000 0.00 0.00 0.00 3.27
8698 9127 6.687901 GCAATACCATACCCACATAGTCAGAA 60.688 42.308 0.00 0.00 0.00 3.02
8699 9128 4.755266 ACCATACCCACATAGTCAGAAC 57.245 45.455 0.00 0.00 0.00 3.01
8700 9129 4.101114 ACCATACCCACATAGTCAGAACA 58.899 43.478 0.00 0.00 0.00 3.18
8701 9130 4.721776 ACCATACCCACATAGTCAGAACAT 59.278 41.667 0.00 0.00 0.00 2.71
8702 9131 5.903010 ACCATACCCACATAGTCAGAACATA 59.097 40.000 0.00 0.00 0.00 2.29
8703 9132 6.558775 ACCATACCCACATAGTCAGAACATAT 59.441 38.462 0.00 0.00 0.00 1.78
8704 9133 7.099764 CCATACCCACATAGTCAGAACATATC 58.900 42.308 0.00 0.00 0.00 1.63
8705 9134 7.038729 CCATACCCACATAGTCAGAACATATCT 60.039 40.741 0.00 0.00 39.68 1.98
8706 9135 9.025041 CATACCCACATAGTCAGAACATATCTA 57.975 37.037 0.00 0.00 36.32 1.98
8707 9136 7.531857 ACCCACATAGTCAGAACATATCTAG 57.468 40.000 0.00 0.00 36.32 2.43
8708 9137 7.069986 ACCCACATAGTCAGAACATATCTAGT 58.930 38.462 0.00 0.00 36.32 2.57
8709 9138 8.225416 ACCCACATAGTCAGAACATATCTAGTA 58.775 37.037 0.00 0.00 36.32 1.82
8710 9139 8.735315 CCCACATAGTCAGAACATATCTAGTAG 58.265 40.741 0.00 0.00 36.32 2.57
8711 9140 8.735315 CCACATAGTCAGAACATATCTAGTAGG 58.265 40.741 0.00 0.00 36.32 3.18
8712 9141 9.508642 CACATAGTCAGAACATATCTAGTAGGA 57.491 37.037 0.00 0.00 36.32 2.94
8720 9149 9.593134 CAGAACATATCTAGTAGGAATAATGCC 57.407 37.037 0.00 0.00 36.32 4.40
8721 9150 8.470805 AGAACATATCTAGTAGGAATAATGCCG 58.529 37.037 0.00 0.00 36.32 5.69
8722 9151 7.956328 ACATATCTAGTAGGAATAATGCCGA 57.044 36.000 0.00 0.00 0.00 5.54
8723 9152 7.773149 ACATATCTAGTAGGAATAATGCCGAC 58.227 38.462 0.00 0.00 0.00 4.79
8724 9153 5.662674 ATCTAGTAGGAATAATGCCGACC 57.337 43.478 0.00 0.00 32.21 4.79
8725 9154 3.830755 TCTAGTAGGAATAATGCCGACCC 59.169 47.826 0.00 0.00 32.21 4.46
8726 9155 1.343465 AGTAGGAATAATGCCGACCCG 59.657 52.381 0.00 0.00 32.21 5.28
8727 9156 1.069668 GTAGGAATAATGCCGACCCGT 59.930 52.381 0.00 0.00 0.00 5.28
8728 9157 1.416243 AGGAATAATGCCGACCCGTA 58.584 50.000 0.00 0.00 0.00 4.02
8729 9158 1.764134 AGGAATAATGCCGACCCGTAA 59.236 47.619 0.00 0.00 0.00 3.18
8730 9159 2.140717 GGAATAATGCCGACCCGTAAG 58.859 52.381 0.00 0.00 0.00 2.34
8731 9160 2.224113 GGAATAATGCCGACCCGTAAGA 60.224 50.000 0.00 0.00 43.02 2.10
8732 9161 2.521105 ATAATGCCGACCCGTAAGAC 57.479 50.000 0.00 0.00 43.02 3.01
8733 9162 0.101040 TAATGCCGACCCGTAAGACG 59.899 55.000 0.00 0.00 42.11 4.18
8734 9163 3.711541 ATGCCGACCCGTAAGACGC 62.712 63.158 0.00 0.00 40.91 5.19
8735 9164 4.424566 GCCGACCCGTAAGACGCA 62.425 66.667 0.00 0.00 40.91 5.24
8736 9165 2.493030 CCGACCCGTAAGACGCAT 59.507 61.111 0.00 0.00 40.91 4.73
8737 9166 1.729276 CCGACCCGTAAGACGCATA 59.271 57.895 0.00 0.00 40.91 3.14
8738 9167 0.313043 CCGACCCGTAAGACGCATAT 59.687 55.000 0.00 0.00 40.91 1.78
8739 9168 1.536766 CCGACCCGTAAGACGCATATA 59.463 52.381 0.00 0.00 40.91 0.86
8740 9169 2.578495 CGACCCGTAAGACGCATATAC 58.422 52.381 0.00 0.00 40.91 1.47
8741 9170 2.031769 CGACCCGTAAGACGCATATACA 60.032 50.000 0.00 0.00 40.91 2.29
8742 9171 3.562505 GACCCGTAAGACGCATATACAG 58.437 50.000 0.00 0.00 40.91 2.74
8743 9172 2.954318 ACCCGTAAGACGCATATACAGT 59.046 45.455 0.00 0.00 40.91 3.55
8744 9173 3.382546 ACCCGTAAGACGCATATACAGTT 59.617 43.478 0.00 0.00 40.91 3.16
8745 9174 3.979495 CCCGTAAGACGCATATACAGTTC 59.021 47.826 0.00 0.00 40.91 3.01
8746 9175 3.662645 CCGTAAGACGCATATACAGTTCG 59.337 47.826 0.00 0.00 40.91 3.95
8747 9176 4.277258 CGTAAGACGCATATACAGTTCGT 58.723 43.478 0.00 0.00 43.02 3.85
8748 9177 4.144221 CGTAAGACGCATATACAGTTCGTG 59.856 45.833 0.00 0.00 43.02 4.35
8749 9178 4.365899 AAGACGCATATACAGTTCGTGA 57.634 40.909 0.00 0.00 33.21 4.35
8750 9179 4.365899 AGACGCATATACAGTTCGTGAA 57.634 40.909 0.00 0.00 33.21 3.18
8751 9180 4.740268 AGACGCATATACAGTTCGTGAAA 58.260 39.130 0.00 0.00 33.21 2.69
8752 9181 5.165676 AGACGCATATACAGTTCGTGAAAA 58.834 37.500 0.00 0.00 33.21 2.29
8753 9182 5.636121 AGACGCATATACAGTTCGTGAAAAA 59.364 36.000 0.00 0.00 33.21 1.94
8767 9196 4.112086 AAAAACGGTTTTGCGGGC 57.888 50.000 18.69 0.00 35.58 6.13
8768 9197 1.521906 AAAAACGGTTTTGCGGGCC 60.522 52.632 18.69 0.00 35.58 5.80
8791 9220 4.176752 GGGCGGGGGCAGAGTTAG 62.177 72.222 0.00 0.00 0.00 2.34
8792 9221 3.081409 GGCGGGGGCAGAGTTAGA 61.081 66.667 0.00 0.00 0.00 2.10
8793 9222 2.187163 GCGGGGGCAGAGTTAGAC 59.813 66.667 0.00 0.00 0.00 2.59
8794 9223 2.901042 CGGGGGCAGAGTTAGACC 59.099 66.667 0.00 0.00 0.00 3.85
8797 9226 3.321445 GGGCAGAGTTAGACCCCC 58.679 66.667 0.00 0.00 36.24 5.40
8798 9227 1.615424 GGGCAGAGTTAGACCCCCA 60.615 63.158 0.00 0.00 36.24 4.96
8799 9228 1.602771 GGCAGAGTTAGACCCCCAC 59.397 63.158 0.00 0.00 0.00 4.61
8800 9229 1.198759 GGCAGAGTTAGACCCCCACA 61.199 60.000 0.00 0.00 0.00 4.17
8801 9230 0.690762 GCAGAGTTAGACCCCCACAA 59.309 55.000 0.00 0.00 0.00 3.33
8802 9231 1.073284 GCAGAGTTAGACCCCCACAAA 59.927 52.381 0.00 0.00 0.00 2.83
8803 9232 2.488347 GCAGAGTTAGACCCCCACAAAA 60.488 50.000 0.00 0.00 0.00 2.44
8804 9233 3.814316 GCAGAGTTAGACCCCCACAAAAT 60.814 47.826 0.00 0.00 0.00 1.82
8805 9234 3.758554 CAGAGTTAGACCCCCACAAAATG 59.241 47.826 0.00 0.00 0.00 2.32
8836 9265 3.782889 AAAGATATTGGTCCGCTTTGC 57.217 42.857 0.00 0.00 0.00 3.68
8847 9276 4.203618 GCTTTGCGGGGTCTACTC 57.796 61.111 0.00 0.00 0.00 2.59
8848 9277 1.810030 GCTTTGCGGGGTCTACTCG 60.810 63.158 0.00 0.00 0.00 4.18
8849 9278 1.153628 CTTTGCGGGGTCTACTCGG 60.154 63.158 0.00 0.00 0.00 4.63
8850 9279 3.305177 TTTGCGGGGTCTACTCGGC 62.305 63.158 5.64 5.64 0.00 5.54
8873 9302 2.819595 CCCACATCGACCCGCAAG 60.820 66.667 0.00 0.00 0.00 4.01
8874 9303 2.047274 CCACATCGACCCGCAAGT 60.047 61.111 0.00 0.00 0.00 3.16
8875 9304 2.100631 CCACATCGACCCGCAAGTC 61.101 63.158 0.00 0.00 0.00 3.01
8876 9305 1.374125 CACATCGACCCGCAAGTCA 60.374 57.895 4.20 0.00 36.52 3.41
8877 9306 1.079819 ACATCGACCCGCAAGTCAG 60.080 57.895 4.20 0.00 36.52 3.51
8878 9307 1.079819 CATCGACCCGCAAGTCAGT 60.080 57.895 4.20 0.00 36.52 3.41
8879 9308 0.172578 CATCGACCCGCAAGTCAGTA 59.827 55.000 4.20 0.00 36.52 2.74
8880 9309 0.892755 ATCGACCCGCAAGTCAGTAA 59.107 50.000 4.20 0.00 36.52 2.24
8881 9310 0.892755 TCGACCCGCAAGTCAGTAAT 59.107 50.000 4.20 0.00 36.52 1.89
8882 9311 1.274167 TCGACCCGCAAGTCAGTAATT 59.726 47.619 4.20 0.00 36.52 1.40
8883 9312 2.073816 CGACCCGCAAGTCAGTAATTT 58.926 47.619 4.20 0.00 36.52 1.82
8884 9313 2.159707 CGACCCGCAAGTCAGTAATTTG 60.160 50.000 4.20 0.00 36.52 2.32
8885 9314 1.539827 ACCCGCAAGTCAGTAATTTGC 59.460 47.619 0.00 0.00 42.75 3.68
8886 9315 1.539388 CCCGCAAGTCAGTAATTTGCA 59.461 47.619 8.84 0.00 45.58 4.08
8887 9316 2.164219 CCCGCAAGTCAGTAATTTGCAT 59.836 45.455 8.84 0.00 45.58 3.96
8888 9317 3.367292 CCCGCAAGTCAGTAATTTGCATT 60.367 43.478 8.84 0.00 45.58 3.56
8889 9318 4.236935 CCGCAAGTCAGTAATTTGCATTT 58.763 39.130 8.84 0.00 45.58 2.32
8890 9319 4.324402 CCGCAAGTCAGTAATTTGCATTTC 59.676 41.667 8.84 0.00 45.58 2.17
8891 9320 4.916831 CGCAAGTCAGTAATTTGCATTTCA 59.083 37.500 8.84 0.00 45.58 2.69
8892 9321 5.401972 CGCAAGTCAGTAATTTGCATTTCAA 59.598 36.000 8.84 0.00 45.58 2.69
8893 9322 6.089820 CGCAAGTCAGTAATTTGCATTTCAAT 59.910 34.615 8.84 0.00 45.58 2.57
8894 9323 7.359431 CGCAAGTCAGTAATTTGCATTTCAATT 60.359 33.333 8.84 0.00 45.58 2.32
8895 9324 8.284693 GCAAGTCAGTAATTTGCATTTCAATTT 58.715 29.630 0.00 0.00 44.88 1.82
8896 9325 9.801714 CAAGTCAGTAATTTGCATTTCAATTTC 57.198 29.630 0.00 0.00 34.12 2.17
8897 9326 9.545105 AAGTCAGTAATTTGCATTTCAATTTCA 57.455 25.926 0.00 0.00 34.12 2.69
8898 9327 9.199982 AGTCAGTAATTTGCATTTCAATTTCAG 57.800 29.630 0.00 0.00 34.12 3.02
8899 9328 9.195411 GTCAGTAATTTGCATTTCAATTTCAGA 57.805 29.630 0.00 0.00 34.12 3.27
8900 9329 9.195411 TCAGTAATTTGCATTTCAATTTCAGAC 57.805 29.630 0.00 0.00 34.12 3.51
8901 9330 8.980610 CAGTAATTTGCATTTCAATTTCAGACA 58.019 29.630 0.00 0.00 34.12 3.41
8902 9331 9.715121 AGTAATTTGCATTTCAATTTCAGACAT 57.285 25.926 0.00 0.00 34.12 3.06
8903 9332 9.749490 GTAATTTGCATTTCAATTTCAGACATG 57.251 29.630 0.00 0.00 34.12 3.21
8904 9333 8.610248 AATTTGCATTTCAATTTCAGACATGA 57.390 26.923 0.00 0.00 34.12 3.07
8905 9334 8.610248 ATTTGCATTTCAATTTCAGACATGAA 57.390 26.923 0.00 0.00 43.72 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 59 3.503363 CTGCCCTAGCGTGCTTGC 61.503 66.667 0.00 1.76 44.31 4.01
279 284 2.689035 TTTGCCATCTCGCCCACACA 62.689 55.000 0.00 0.00 0.00 3.72
333 339 1.821759 CAGTTCGCCCACACACCAA 60.822 57.895 0.00 0.00 0.00 3.67
363 369 1.531365 ACACGGAAGGGACGGTGTA 60.531 57.895 9.53 0.00 46.72 2.90
370 376 2.553466 CCATTTTACCACACGGAAGGGA 60.553 50.000 0.00 0.00 38.45 4.20
374 380 3.504134 CACATCCATTTTACCACACGGAA 59.496 43.478 0.00 0.00 35.59 4.30
409 415 2.456948 CGCGTGTGTGGTGTGTCAA 61.457 57.895 0.00 0.00 0.00 3.18
411 417 2.583868 TCGCGTGTGTGGTGTGTC 60.584 61.111 5.77 0.00 0.00 3.67
478 484 6.357579 TCCATTACCGTCCAGTAACTTTTA 57.642 37.500 0.00 0.00 35.14 1.52
518 524 1.144496 ACACGTGTGGGCGTTAACT 59.856 52.632 22.71 0.00 43.83 2.24
520 526 3.720531 CACACGTGTGGGCGTTAA 58.279 55.556 35.65 0.00 43.83 2.01
669 689 1.000896 GGGTGGAAGATGGTGGGTG 60.001 63.158 0.00 0.00 0.00 4.61
677 697 1.290134 GGGTGAGAAGGGTGGAAGAT 58.710 55.000 0.00 0.00 0.00 2.40
779 799 1.123928 GGAATGAGACGGTGGGATCT 58.876 55.000 0.00 0.00 0.00 2.75
780 800 0.830648 TGGAATGAGACGGTGGGATC 59.169 55.000 0.00 0.00 0.00 3.36
792 812 5.521906 TTTGTGGACGATTTTTGGAATGA 57.478 34.783 0.00 0.00 0.00 2.57
901 921 2.383683 TGGGATGTGGGATTTGGGTTAA 59.616 45.455 0.00 0.00 0.00 2.01
1005 1025 0.953471 TTGATTTGGAGACCGCGGTG 60.953 55.000 39.65 8.53 0.00 4.94
1359 1385 1.078918 CGCCATCACCTTCTGCAGA 60.079 57.895 13.74 13.74 0.00 4.26
1811 1839 7.338800 ACATGAATTTTCATCGCCTAGAATT 57.661 32.000 0.00 0.00 45.62 2.17
1826 1854 9.155975 CAACTACTAGCAGTCTAACATGAATTT 57.844 33.333 0.00 0.00 0.00 1.82
1878 1906 3.753294 ACGGGATTAGCCAATACAGAG 57.247 47.619 0.00 0.00 38.95 3.35
1898 1926 4.669318 GAGTGACTCGAAATCCACGATTA 58.331 43.478 0.00 0.00 39.02 1.75
1899 1927 3.512680 GAGTGACTCGAAATCCACGATT 58.487 45.455 0.00 0.00 39.02 3.34
1900 1928 3.152261 GAGTGACTCGAAATCCACGAT 57.848 47.619 0.00 0.00 39.02 3.73
1901 1929 2.631418 GAGTGACTCGAAATCCACGA 57.369 50.000 0.00 0.00 38.11 4.35
1939 1967 5.798015 TTGTGACTCATAGACTAGTCGTC 57.202 43.478 17.07 16.74 44.14 4.20
1940 1968 6.570672 TTTTGTGACTCATAGACTAGTCGT 57.429 37.500 17.07 8.55 44.14 4.34
1941 1969 9.737427 ATATTTTTGTGACTCATAGACTAGTCG 57.263 33.333 17.07 5.27 44.14 4.18
1943 1971 9.823647 CCATATTTTTGTGACTCATAGACTAGT 57.176 33.333 0.00 0.00 0.00 2.57
1944 1972 9.823647 ACCATATTTTTGTGACTCATAGACTAG 57.176 33.333 0.00 0.00 0.00 2.57
1945 1973 9.817809 GACCATATTTTTGTGACTCATAGACTA 57.182 33.333 0.00 0.00 0.00 2.59
1946 1974 7.492669 CGACCATATTTTTGTGACTCATAGACT 59.507 37.037 0.00 0.00 0.00 3.24
1947 1975 7.491372 TCGACCATATTTTTGTGACTCATAGAC 59.509 37.037 0.00 0.00 0.00 2.59
1948 1976 7.491372 GTCGACCATATTTTTGTGACTCATAGA 59.509 37.037 3.51 0.00 0.00 1.98
1949 1977 7.492669 AGTCGACCATATTTTTGTGACTCATAG 59.507 37.037 13.01 0.00 30.06 2.23
1950 1978 7.327975 AGTCGACCATATTTTTGTGACTCATA 58.672 34.615 13.01 0.00 30.06 2.15
1951 1979 6.173339 AGTCGACCATATTTTTGTGACTCAT 58.827 36.000 13.01 0.00 30.06 2.90
1952 1980 5.547465 AGTCGACCATATTTTTGTGACTCA 58.453 37.500 13.01 0.00 30.06 3.41
1953 1981 5.637810 TGAGTCGACCATATTTTTGTGACTC 59.362 40.000 13.01 11.07 46.91 3.36
1954 1982 5.547465 TGAGTCGACCATATTTTTGTGACT 58.453 37.500 13.01 0.00 38.09 3.41
1955 1983 5.671329 GCTGAGTCGACCATATTTTTGTGAC 60.671 44.000 13.01 0.00 0.00 3.67
1956 1984 4.391830 GCTGAGTCGACCATATTTTTGTGA 59.608 41.667 13.01 0.00 0.00 3.58
1957 1985 4.393062 AGCTGAGTCGACCATATTTTTGTG 59.607 41.667 13.01 0.00 0.00 3.33
1958 1986 4.579869 AGCTGAGTCGACCATATTTTTGT 58.420 39.130 13.01 0.00 0.00 2.83
1959 1987 5.551760 AAGCTGAGTCGACCATATTTTTG 57.448 39.130 13.01 0.00 0.00 2.44
1960 1988 6.313905 CACTAAGCTGAGTCGACCATATTTTT 59.686 38.462 13.01 1.53 0.00 1.94
1961 1989 5.812642 CACTAAGCTGAGTCGACCATATTTT 59.187 40.000 13.01 3.16 0.00 1.82
1962 1990 5.105310 ACACTAAGCTGAGTCGACCATATTT 60.105 40.000 13.01 4.77 0.00 1.40
1963 1991 4.402793 ACACTAAGCTGAGTCGACCATATT 59.597 41.667 13.01 9.73 0.00 1.28
1964 1992 3.954904 ACACTAAGCTGAGTCGACCATAT 59.045 43.478 13.01 0.00 0.00 1.78
1965 1993 3.353557 ACACTAAGCTGAGTCGACCATA 58.646 45.455 13.01 0.00 0.00 2.74
1966 1994 2.164624 GACACTAAGCTGAGTCGACCAT 59.835 50.000 13.01 0.00 0.00 3.55
1967 1995 1.540267 GACACTAAGCTGAGTCGACCA 59.460 52.381 13.01 9.18 0.00 4.02
1968 1996 2.265647 GACACTAAGCTGAGTCGACC 57.734 55.000 13.01 4.42 0.00 4.79
1972 2000 2.474856 CGAGTCGACACTAAGCTGAGTC 60.475 54.545 19.50 0.00 30.63 3.36
1973 2001 1.465387 CGAGTCGACACTAAGCTGAGT 59.535 52.381 19.50 0.00 30.63 3.41
1974 2002 1.792273 GCGAGTCGACACTAAGCTGAG 60.792 57.143 18.61 0.00 34.91 3.35
1975 2003 0.168348 GCGAGTCGACACTAAGCTGA 59.832 55.000 18.61 0.00 34.91 4.26
1976 2004 1.128724 CGCGAGTCGACACTAAGCTG 61.129 60.000 18.61 7.91 41.67 4.24
1977 2005 1.134901 CGCGAGTCGACACTAAGCT 59.865 57.895 18.61 0.00 41.67 3.74
1978 2006 1.134075 TCGCGAGTCGACACTAAGC 59.866 57.895 18.61 13.51 43.16 3.09
1986 2014 1.898459 GACTCAGTGTCGCGAGTCGA 61.898 60.000 18.61 2.86 46.20 4.20
1987 2015 1.510204 GACTCAGTGTCGCGAGTCG 60.510 63.158 10.24 8.54 46.20 4.18
1995 2023 0.797542 ACTAGTCGCGACTCAGTGTC 59.202 55.000 42.28 13.25 42.54 3.67
1996 2024 0.797542 GACTAGTCGCGACTCAGTGT 59.202 55.000 42.28 32.46 42.54 3.55
1997 2025 0.796927 TGACTAGTCGCGACTCAGTG 59.203 55.000 42.28 29.91 42.54 3.66
1998 2026 0.797542 GTGACTAGTCGCGACTCAGT 59.202 55.000 42.28 36.23 42.54 3.41
1999 2027 0.796927 TGTGACTAGTCGCGACTCAG 59.203 55.000 42.28 33.82 42.66 3.35
2000 2028 1.069432 GTTGTGACTAGTCGCGACTCA 60.069 52.381 42.28 31.02 46.04 3.41
2001 2029 1.604396 GTTGTGACTAGTCGCGACTC 58.396 55.000 42.28 28.88 46.04 3.36
2002 2030 0.110328 CGTTGTGACTAGTCGCGACT 60.110 55.000 40.17 40.17 46.87 4.18
2003 2031 1.662845 GCGTTGTGACTAGTCGCGAC 61.663 60.000 33.40 33.40 46.06 5.19
2004 2032 1.441515 GCGTTGTGACTAGTCGCGA 60.442 57.895 26.76 23.69 42.66 5.87
2005 2033 3.061674 GCGTTGTGACTAGTCGCG 58.938 61.111 26.76 22.04 42.66 5.87
2006 2034 1.344942 CCTGCGTTGTGACTAGTCGC 61.345 60.000 26.18 26.18 45.70 5.19
2007 2035 1.344942 GCCTGCGTTGTGACTAGTCG 61.345 60.000 17.85 7.44 0.00 4.18
2008 2036 0.038159 AGCCTGCGTTGTGACTAGTC 60.038 55.000 16.32 16.32 0.00 2.59
2009 2037 0.038159 GAGCCTGCGTTGTGACTAGT 60.038 55.000 0.00 0.00 0.00 2.57
2010 2038 1.073216 CGAGCCTGCGTTGTGACTAG 61.073 60.000 0.00 0.00 0.00 2.57
2011 2039 1.080772 CGAGCCTGCGTTGTGACTA 60.081 57.895 0.00 0.00 0.00 2.59
2012 2040 2.356313 CGAGCCTGCGTTGTGACT 60.356 61.111 0.00 0.00 0.00 3.41
2013 2041 2.355837 TCGAGCCTGCGTTGTGAC 60.356 61.111 0.00 0.00 0.00 3.67
2014 2042 2.355837 GTCGAGCCTGCGTTGTGA 60.356 61.111 0.00 0.00 0.00 3.58
2015 2043 1.891060 GAAGTCGAGCCTGCGTTGTG 61.891 60.000 0.00 0.00 0.00 3.33
2016 2044 1.664965 GAAGTCGAGCCTGCGTTGT 60.665 57.895 0.00 0.00 0.00 3.32
2017 2045 0.946221 AAGAAGTCGAGCCTGCGTTG 60.946 55.000 0.00 0.00 0.00 4.10
2018 2046 0.667792 GAAGAAGTCGAGCCTGCGTT 60.668 55.000 0.00 0.00 0.00 4.84
2019 2047 1.080434 GAAGAAGTCGAGCCTGCGT 60.080 57.895 0.00 0.00 0.00 5.24
2020 2048 1.807573 GGAAGAAGTCGAGCCTGCG 60.808 63.158 0.00 0.00 0.00 5.18
2021 2049 1.807573 CGGAAGAAGTCGAGCCTGC 60.808 63.158 0.00 0.00 0.00 4.85
2022 2050 0.179150 CTCGGAAGAAGTCGAGCCTG 60.179 60.000 0.00 0.00 44.68 4.85
2023 2051 2.185238 CTCGGAAGAAGTCGAGCCT 58.815 57.895 0.00 0.00 44.68 4.58
2024 2052 4.796225 CTCGGAAGAAGTCGAGCC 57.204 61.111 0.00 0.00 44.68 4.70
2027 2055 0.959553 AGCAACTCGGAAGAAGTCGA 59.040 50.000 0.00 0.00 41.32 4.20
2028 2056 1.063806 CAGCAACTCGGAAGAAGTCG 58.936 55.000 0.00 0.00 41.32 4.18
2029 2057 0.793250 GCAGCAACTCGGAAGAAGTC 59.207 55.000 0.00 0.00 41.32 3.01
2030 2058 0.603975 GGCAGCAACTCGGAAGAAGT 60.604 55.000 0.00 0.00 41.32 3.01
2031 2059 1.301677 GGGCAGCAACTCGGAAGAAG 61.302 60.000 0.00 0.00 41.32 2.85
2032 2060 1.302511 GGGCAGCAACTCGGAAGAA 60.303 57.895 0.00 0.00 41.32 2.52
2033 2061 2.347490 GGGCAGCAACTCGGAAGA 59.653 61.111 0.00 0.00 39.12 2.87
2034 2062 2.747855 GGGGCAGCAACTCGGAAG 60.748 66.667 0.00 0.00 0.00 3.46
2035 2063 3.551496 CTGGGGCAGCAACTCGGAA 62.551 63.158 0.00 0.00 0.00 4.30
2036 2064 4.020617 CTGGGGCAGCAACTCGGA 62.021 66.667 0.00 0.00 0.00 4.55
2037 2065 3.965539 CTCTGGGGCAGCAACTCGG 62.966 68.421 0.00 0.00 0.00 4.63
2038 2066 2.435586 CTCTGGGGCAGCAACTCG 60.436 66.667 0.00 0.00 0.00 4.18
2039 2067 2.749441 GCTCTGGGGCAGCAACTC 60.749 66.667 0.00 0.00 36.82 3.01
2040 2068 4.711949 CGCTCTGGGGCAGCAACT 62.712 66.667 0.00 0.00 36.61 3.16
2041 2069 4.704833 TCGCTCTGGGGCAGCAAC 62.705 66.667 0.00 0.00 36.61 4.17
2042 2070 4.704833 GTCGCTCTGGGGCAGCAA 62.705 66.667 0.00 0.00 36.61 3.91
2044 2072 4.828925 GAGTCGCTCTGGGGCAGC 62.829 72.222 0.00 0.00 0.00 5.25
2045 2073 4.504916 CGAGTCGCTCTGGGGCAG 62.505 72.222 0.00 0.00 0.00 4.85
2070 2098 2.034001 GGATTATGGTTTTCGAGTCGCG 60.034 50.000 7.92 0.00 42.69 5.87
2071 2099 3.195661 AGGATTATGGTTTTCGAGTCGC 58.804 45.455 7.92 0.00 0.00 5.19
2072 2100 6.534079 ACTTTAGGATTATGGTTTTCGAGTCG 59.466 38.462 6.09 6.09 0.00 4.18
2073 2101 7.548075 TGACTTTAGGATTATGGTTTTCGAGTC 59.452 37.037 0.00 0.00 0.00 3.36
2074 2102 7.391620 TGACTTTAGGATTATGGTTTTCGAGT 58.608 34.615 0.00 0.00 0.00 4.18
2075 2103 7.843490 TGACTTTAGGATTATGGTTTTCGAG 57.157 36.000 0.00 0.00 0.00 4.04
2076 2104 7.497909 GGATGACTTTAGGATTATGGTTTTCGA 59.502 37.037 0.00 0.00 0.00 3.71
2077 2105 7.282224 TGGATGACTTTAGGATTATGGTTTTCG 59.718 37.037 0.00 0.00 0.00 3.46
2078 2106 8.519799 TGGATGACTTTAGGATTATGGTTTTC 57.480 34.615 0.00 0.00 0.00 2.29
2079 2107 8.336235 TCTGGATGACTTTAGGATTATGGTTTT 58.664 33.333 0.00 0.00 0.00 2.43
2080 2108 7.775561 GTCTGGATGACTTTAGGATTATGGTTT 59.224 37.037 0.00 0.00 42.21 3.27
2081 2109 7.283329 GTCTGGATGACTTTAGGATTATGGTT 58.717 38.462 0.00 0.00 42.21 3.67
2082 2110 6.183361 GGTCTGGATGACTTTAGGATTATGGT 60.183 42.308 0.00 0.00 44.74 3.55
2083 2111 6.183361 TGGTCTGGATGACTTTAGGATTATGG 60.183 42.308 0.00 0.00 44.74 2.74
2084 2112 6.708054 GTGGTCTGGATGACTTTAGGATTATG 59.292 42.308 0.00 0.00 44.74 1.90
2085 2113 6.183361 GGTGGTCTGGATGACTTTAGGATTAT 60.183 42.308 0.00 0.00 44.74 1.28
2235 2263 6.992063 ATCCACAAATACTTTACAGCAGAG 57.008 37.500 0.00 0.00 0.00 3.35
2256 2284 7.777095 AGTAGTCCATTCTCTTGACAGTAATC 58.223 38.462 0.00 0.00 0.00 1.75
2291 2319 7.231519 TCACACTATGATATCGATTCTTCACCT 59.768 37.037 1.71 0.00 29.99 4.00
2451 2480 7.411486 AGCAACTAGAAGTTCAGCTAAGATA 57.589 36.000 5.50 0.00 36.21 1.98
2523 2552 4.019321 TGCCTATGAGCAGGTAAAAGAAGT 60.019 41.667 0.00 0.00 38.00 3.01
2803 2868 5.606749 ACATTGGAGCCTGGTAATATCAGTA 59.393 40.000 0.00 0.00 0.00 2.74
2805 2870 4.758674 CACATTGGAGCCTGGTAATATCAG 59.241 45.833 0.00 0.00 0.00 2.90
2827 2892 7.256494 TGGGTGCATAAGATCATATATGACA 57.744 36.000 17.60 6.69 40.03 3.58
3303 3368 5.702670 CAGCACATCCTACATTTCCGATATT 59.297 40.000 0.00 0.00 0.00 1.28
3304 3369 5.240891 CAGCACATCCTACATTTCCGATAT 58.759 41.667 0.00 0.00 0.00 1.63
3310 3375 3.012518 ACAGCAGCACATCCTACATTTC 58.987 45.455 0.00 0.00 0.00 2.17
3344 3409 8.491045 TTATGGATATGACTTGTGGACATCTA 57.509 34.615 0.00 0.00 0.00 1.98
3350 3415 9.070179 CAATTCATTATGGATATGACTTGTGGA 57.930 33.333 0.00 0.00 33.27 4.02
3499 3564 5.234329 CCTAGTAATACCATGCACTTGTTCG 59.766 44.000 0.00 0.00 0.00 3.95
3548 3614 3.121194 TGCGCGCAAATTGTTTAACATTC 60.121 39.130 34.66 0.00 0.00 2.67
3926 3992 3.181476 GCCAGCCCATTTATTTCGAACAT 60.181 43.478 0.00 0.00 0.00 2.71
4219 4316 9.912634 AAAAAGGTGTGATATTTTATGAGTGTG 57.087 29.630 0.00 0.00 0.00 3.82
4281 4378 7.823799 TGCAGAGAGATTCAAATGTTACATACA 59.176 33.333 0.00 0.00 41.97 2.29
4343 4440 4.327898 CACAAAGACAAACATGCCATATGC 59.672 41.667 0.00 0.00 41.77 3.14
4484 4616 6.435430 TTGATCCGAAATGACTGTAAATGG 57.565 37.500 0.00 0.00 0.00 3.16
4553 4685 2.712057 CTTTGGTCAGAAAAGCGCAT 57.288 45.000 11.47 0.00 0.00 4.73
4933 5191 1.839994 AGGAGATGAATCGAAGCCCAA 59.160 47.619 0.00 0.00 0.00 4.12
4992 5250 7.363793 CCACCCCTACCAAATTTTGAATTAGAG 60.364 40.741 10.72 6.03 0.00 2.43
5001 5259 1.203075 TCGCCACCCCTACCAAATTTT 60.203 47.619 0.00 0.00 0.00 1.82
5125 5383 3.448686 CGCTTCGTGATCCAGAATAAGT 58.551 45.455 1.20 0.00 0.00 2.24
5211 5469 2.278857 CTCGGACCCGCTTGATCG 60.279 66.667 3.13 0.00 39.59 3.69
5304 5562 2.176045 TCCAGTGTCGCCTCATCTTTA 58.824 47.619 0.00 0.00 0.00 1.85
5382 5640 3.494749 CCTCTCCATCAAGCTCAGGAATC 60.495 52.174 0.00 0.00 0.00 2.52
5465 5723 4.581409 CACCAACATGAATAGCATCCATCA 59.419 41.667 0.00 0.00 34.15 3.07
5754 6019 7.182060 ACAACTTTGACATTTCCCTGGTATAT 58.818 34.615 0.00 0.00 0.00 0.86
5938 6208 3.833442 TGTGCACACGATACTAGAACAG 58.167 45.455 17.42 0.00 0.00 3.16
6124 6395 6.972328 ACAACTATTATAAAAGCACAATGCCG 59.028 34.615 0.00 0.00 46.52 5.69
6210 6483 5.467735 GGCTGGAATTGGATTTATGCATTTC 59.532 40.000 3.54 0.00 37.59 2.17
6275 6548 2.042831 GCAGATGTGGGGTGCAGAC 61.043 63.158 0.00 0.00 37.16 3.51
6309 6583 7.699566 TGAGGTTTTTGGAATATTATACGTGC 58.300 34.615 0.00 0.00 0.00 5.34
6339 6613 4.574013 GGTGAACAAATGCACAAATTCCAA 59.426 37.500 0.00 0.00 36.76 3.53
6384 6665 4.565962 TGCACACTTAACAAAAGCAACATG 59.434 37.500 0.00 0.00 0.00 3.21
6451 6732 6.381420 TCCTGGACAACTTGGAAACATTTAAA 59.619 34.615 0.00 0.00 42.32 1.52
6523 6804 5.923733 AGAACACTGGTTGATAGGTAGAG 57.076 43.478 0.00 0.00 37.36 2.43
6528 6809 6.612306 GCTTTTTAGAACACTGGTTGATAGG 58.388 40.000 0.00 0.00 37.36 2.57
6592 6873 1.122019 CCCGCTTAGCCCACCTAGAT 61.122 60.000 0.00 0.00 0.00 1.98
6657 6938 4.745125 ACGGATAAACTCATTGTAGATGCG 59.255 41.667 0.00 0.00 39.14 4.73
6666 6947 9.832445 ACATAGTTATTGACGGATAAACTCATT 57.168 29.630 0.00 0.00 0.00 2.57
6701 6982 1.904287 GTGCCACATAAACTGGGACA 58.096 50.000 4.38 0.00 46.59 4.02
6724 7005 5.121925 GGTCAAACTTTAACCTCGAATCCTC 59.878 44.000 0.00 0.00 0.00 3.71
6726 7007 4.758165 TGGTCAAACTTTAACCTCGAATCC 59.242 41.667 0.00 0.00 34.05 3.01
6890 7289 8.286800 TCATATTTCGTGGTTTAACTTTGACTG 58.713 33.333 0.00 0.00 0.00 3.51
7093 7496 7.936496 TGTAGCAATCCAGTCAAAATGAATA 57.064 32.000 0.00 0.00 0.00 1.75
7127 7530 6.587990 GCATAGCTATCATTCACGTACTTCAT 59.412 38.462 2.34 0.00 0.00 2.57
7252 7655 5.179742 TGAGTGAACAAACACACTAAAACGT 59.820 36.000 0.00 0.00 45.54 3.99
7452 7856 4.701765 CAGTAGCTATGCCTGAACAGAAT 58.298 43.478 0.00 0.25 0.00 2.40
7549 7953 5.348164 CCAGAAAACTTTCGTTTGACCAAT 58.652 37.500 0.00 0.00 42.28 3.16
7560 7964 6.641169 AACATCTCTTCCCAGAAAACTTTC 57.359 37.500 0.00 0.00 37.45 2.62
7697 8102 1.603802 AGTCAACTGCATCAACAACCG 59.396 47.619 0.00 0.00 0.00 4.44
7726 8131 7.504911 CCAAGATAGTCAGATCCATTTTCCATT 59.495 37.037 0.00 0.00 0.00 3.16
7741 8146 3.891977 CTCGAGGGATTCCAAGATAGTCA 59.108 47.826 3.91 0.00 34.83 3.41
7768 8173 5.908341 AGTCCGAATAAGAGGTCATTCTTC 58.092 41.667 0.00 0.00 38.35 2.87
7843 8248 4.813161 GCTAGCTGCTTCATTATCTGAACA 59.187 41.667 7.79 0.00 38.97 3.18
8026 8431 0.891373 CACCCAACACCAACACACAA 59.109 50.000 0.00 0.00 0.00 3.33
8127 8536 1.830587 AACCGCTGAGATGCCTCACA 61.831 55.000 0.00 0.00 44.01 3.58
8147 8556 0.321346 TGCATCGTTGAGGAGCTTGA 59.679 50.000 0.00 0.00 0.00 3.02
8192 8601 8.802267 CAGGAAAAATAGGGAACAAACTGATAA 58.198 33.333 0.00 0.00 0.00 1.75
8305 8714 4.264543 CTTAACTGAAGCTGGTATTGCG 57.735 45.455 0.00 0.00 35.28 4.85
8390 8799 0.386858 TGAACGAGTGCTGCGACTAC 60.387 55.000 5.03 0.00 0.00 2.73
8427 8841 2.040278 CAAGGGACCATGGTTTCTCAGA 59.960 50.000 20.85 0.00 0.00 3.27
8439 8865 4.069232 CGAGCGAGCAAGGGACCA 62.069 66.667 0.00 0.00 0.00 4.02
8456 8883 2.053627 CCAGAACAAGCGTTTGCATTC 58.946 47.619 12.28 9.28 46.23 2.67
8457 8884 1.680735 TCCAGAACAAGCGTTTGCATT 59.319 42.857 12.28 0.00 46.23 3.56
8517 8946 0.811616 GACGGATACTTGGCTGGCTG 60.812 60.000 2.00 0.00 0.00 4.85
8543 8972 3.509967 TCGAGTTGGTCTAAGCATTCTCA 59.490 43.478 0.00 0.00 31.47 3.27
8564 8993 1.637478 TTATTTGGGTCGGCGCGTTC 61.637 55.000 8.43 0.00 0.00 3.95
8572 9001 5.063204 TCATTGCTATCCTTATTTGGGTCG 58.937 41.667 0.00 0.00 0.00 4.79
8581 9010 4.040461 GGCACCTACTCATTGCTATCCTTA 59.960 45.833 0.00 0.00 36.46 2.69
8582 9011 3.181450 GGCACCTACTCATTGCTATCCTT 60.181 47.826 0.00 0.00 36.46 3.36
8583 9012 2.370189 GGCACCTACTCATTGCTATCCT 59.630 50.000 0.00 0.00 36.46 3.24
8584 9013 2.772287 GGCACCTACTCATTGCTATCC 58.228 52.381 0.00 0.00 36.46 2.59
8585 9014 2.035961 TCGGCACCTACTCATTGCTATC 59.964 50.000 0.00 0.00 36.46 2.08
8586 9015 2.039418 TCGGCACCTACTCATTGCTAT 58.961 47.619 0.00 0.00 36.46 2.97
8587 9016 1.136305 GTCGGCACCTACTCATTGCTA 59.864 52.381 0.00 0.00 36.46 3.49
8588 9017 0.108138 GTCGGCACCTACTCATTGCT 60.108 55.000 0.00 0.00 36.46 3.91
8589 9018 1.090052 GGTCGGCACCTACTCATTGC 61.090 60.000 0.00 0.00 40.00 3.56
8590 9019 0.462047 GGGTCGGCACCTACTCATTG 60.462 60.000 6.16 0.00 43.22 2.82
8591 9020 0.907704 TGGGTCGGCACCTACTCATT 60.908 55.000 0.00 0.00 43.22 2.57
8592 9021 0.907704 TTGGGTCGGCACCTACTCAT 60.908 55.000 0.00 0.00 43.22 2.90
8593 9022 1.122632 TTTGGGTCGGCACCTACTCA 61.123 55.000 0.00 0.00 43.22 3.41
8594 9023 0.252197 ATTTGGGTCGGCACCTACTC 59.748 55.000 0.00 0.00 43.22 2.59
8595 9024 1.575419 TATTTGGGTCGGCACCTACT 58.425 50.000 0.00 0.00 43.22 2.57
8596 9025 2.285977 CTTATTTGGGTCGGCACCTAC 58.714 52.381 0.00 0.00 43.22 3.18
8597 9026 1.210967 CCTTATTTGGGTCGGCACCTA 59.789 52.381 0.00 0.00 43.22 3.08
8598 9027 0.034477 CCTTATTTGGGTCGGCACCT 60.034 55.000 0.00 0.00 43.22 4.00
8599 9028 0.034863 TCCTTATTTGGGTCGGCACC 60.035 55.000 0.00 0.00 42.90 5.01
8600 9029 1.676006 CATCCTTATTTGGGTCGGCAC 59.324 52.381 0.00 0.00 0.00 5.01
8601 9030 1.409521 CCATCCTTATTTGGGTCGGCA 60.410 52.381 0.00 0.00 0.00 5.69
8602 9031 1.318576 CCATCCTTATTTGGGTCGGC 58.681 55.000 0.00 0.00 0.00 5.54
8603 9032 1.318576 GCCATCCTTATTTGGGTCGG 58.681 55.000 0.00 0.00 33.40 4.79
8604 9033 2.051334 TGCCATCCTTATTTGGGTCG 57.949 50.000 0.00 0.00 33.40 4.79
8605 9034 3.960102 TCATTGCCATCCTTATTTGGGTC 59.040 43.478 0.00 0.00 33.40 4.46
8606 9035 3.962718 CTCATTGCCATCCTTATTTGGGT 59.037 43.478 0.00 0.00 33.40 4.51
8607 9036 3.962718 ACTCATTGCCATCCTTATTTGGG 59.037 43.478 0.00 0.00 33.40 4.12
8627 9056 4.709397 GCTCTATGCTGACCATATCCTACT 59.291 45.833 0.00 0.00 35.91 2.57
8628 9057 4.464244 TGCTCTATGCTGACCATATCCTAC 59.536 45.833 0.00 0.00 43.37 3.18
8629 9058 4.677182 TGCTCTATGCTGACCATATCCTA 58.323 43.478 0.00 0.00 43.37 2.94
8630 9059 3.514539 TGCTCTATGCTGACCATATCCT 58.485 45.455 0.00 0.00 43.37 3.24
8631 9060 3.969287 TGCTCTATGCTGACCATATCC 57.031 47.619 0.00 0.00 43.37 2.59
8632 9061 5.814705 GGTATTGCTCTATGCTGACCATATC 59.185 44.000 0.00 0.00 43.37 1.63
8633 9062 5.249163 TGGTATTGCTCTATGCTGACCATAT 59.751 40.000 0.00 0.00 40.64 1.78
8634 9063 4.592778 TGGTATTGCTCTATGCTGACCATA 59.407 41.667 0.00 0.00 40.64 2.74
8635 9064 3.392285 TGGTATTGCTCTATGCTGACCAT 59.608 43.478 0.00 0.00 40.64 3.55
8636 9065 2.771372 TGGTATTGCTCTATGCTGACCA 59.229 45.455 0.00 0.00 42.05 4.02
8637 9066 3.475566 TGGTATTGCTCTATGCTGACC 57.524 47.619 0.00 0.00 43.37 4.02
8638 9067 4.932200 GGTATGGTATTGCTCTATGCTGAC 59.068 45.833 0.00 0.00 43.37 3.51
8639 9068 4.020218 GGGTATGGTATTGCTCTATGCTGA 60.020 45.833 0.00 0.00 43.37 4.26
8640 9069 4.256920 GGGTATGGTATTGCTCTATGCTG 58.743 47.826 0.00 0.00 43.37 4.41
8641 9070 3.909995 TGGGTATGGTATTGCTCTATGCT 59.090 43.478 0.00 0.00 43.37 3.79
8642 9071 4.286297 TGGGTATGGTATTGCTCTATGC 57.714 45.455 0.00 0.00 43.25 3.14
8643 9072 8.928448 ACTATATGGGTATGGTATTGCTCTATG 58.072 37.037 0.00 0.00 31.10 2.23
8644 9073 9.148879 GACTATATGGGTATGGTATTGCTCTAT 57.851 37.037 0.00 0.00 32.81 1.98
8645 9074 8.119891 TGACTATATGGGTATGGTATTGCTCTA 58.880 37.037 0.00 0.00 32.81 2.43
8646 9075 6.959954 TGACTATATGGGTATGGTATTGCTCT 59.040 38.462 0.00 0.00 32.81 4.09
8647 9076 7.182817 TGACTATATGGGTATGGTATTGCTC 57.817 40.000 0.00 0.00 32.81 4.26
8648 9077 7.568128 TTGACTATATGGGTATGGTATTGCT 57.432 36.000 0.00 0.00 32.81 3.91
8649 9078 6.316390 GCTTGACTATATGGGTATGGTATTGC 59.684 42.308 0.00 0.00 32.81 3.56
8650 9079 7.394016 TGCTTGACTATATGGGTATGGTATTG 58.606 38.462 0.00 0.00 32.81 1.90
8651 9080 7.568128 TGCTTGACTATATGGGTATGGTATT 57.432 36.000 0.00 0.00 32.81 1.89
8652 9081 7.568128 TTGCTTGACTATATGGGTATGGTAT 57.432 36.000 0.00 0.00 32.81 2.73
8653 9082 7.568128 ATTGCTTGACTATATGGGTATGGTA 57.432 36.000 0.00 0.00 32.81 3.25
8654 9083 5.904984 TTGCTTGACTATATGGGTATGGT 57.095 39.130 0.00 0.00 35.04 3.55
8655 9084 6.823689 GGTATTGCTTGACTATATGGGTATGG 59.176 42.308 0.00 0.00 0.00 2.74
8656 9085 7.394016 TGGTATTGCTTGACTATATGGGTATG 58.606 38.462 0.00 0.00 0.00 2.39
8657 9086 7.568128 TGGTATTGCTTGACTATATGGGTAT 57.432 36.000 0.00 0.00 0.00 2.73
8658 9087 7.568128 ATGGTATTGCTTGACTATATGGGTA 57.432 36.000 0.00 0.00 0.00 3.69
8659 9088 5.904984 TGGTATTGCTTGACTATATGGGT 57.095 39.130 0.00 0.00 0.00 4.51
8660 9089 6.823689 GGTATGGTATTGCTTGACTATATGGG 59.176 42.308 0.00 0.00 0.00 4.00
8661 9090 6.823689 GGGTATGGTATTGCTTGACTATATGG 59.176 42.308 0.00 0.00 0.00 2.74
8662 9091 7.334421 GTGGGTATGGTATTGCTTGACTATATG 59.666 40.741 0.00 0.00 0.00 1.78
8663 9092 7.017155 TGTGGGTATGGTATTGCTTGACTATAT 59.983 37.037 0.00 0.00 0.00 0.86
8664 9093 6.327887 TGTGGGTATGGTATTGCTTGACTATA 59.672 38.462 0.00 0.00 0.00 1.31
8665 9094 5.131977 TGTGGGTATGGTATTGCTTGACTAT 59.868 40.000 0.00 0.00 0.00 2.12
8666 9095 4.471747 TGTGGGTATGGTATTGCTTGACTA 59.528 41.667 0.00 0.00 0.00 2.59
8667 9096 3.265737 TGTGGGTATGGTATTGCTTGACT 59.734 43.478 0.00 0.00 0.00 3.41
8668 9097 3.616219 TGTGGGTATGGTATTGCTTGAC 58.384 45.455 0.00 0.00 0.00 3.18
8669 9098 4.518278 ATGTGGGTATGGTATTGCTTGA 57.482 40.909 0.00 0.00 0.00 3.02
8670 9099 5.376625 ACTATGTGGGTATGGTATTGCTTG 58.623 41.667 0.00 0.00 0.00 4.01
8671 9100 5.131977 TGACTATGTGGGTATGGTATTGCTT 59.868 40.000 0.00 0.00 0.00 3.91
8672 9101 4.658435 TGACTATGTGGGTATGGTATTGCT 59.342 41.667 0.00 0.00 0.00 3.91
8673 9102 4.968259 TGACTATGTGGGTATGGTATTGC 58.032 43.478 0.00 0.00 0.00 3.56
8674 9103 6.419484 TCTGACTATGTGGGTATGGTATTG 57.581 41.667 0.00 0.00 0.00 1.90
8675 9104 6.385759 TGTTCTGACTATGTGGGTATGGTATT 59.614 38.462 0.00 0.00 0.00 1.89
8676 9105 5.903010 TGTTCTGACTATGTGGGTATGGTAT 59.097 40.000 0.00 0.00 0.00 2.73
8677 9106 5.274015 TGTTCTGACTATGTGGGTATGGTA 58.726 41.667 0.00 0.00 0.00 3.25
8678 9107 4.101114 TGTTCTGACTATGTGGGTATGGT 58.899 43.478 0.00 0.00 0.00 3.55
8679 9108 4.753516 TGTTCTGACTATGTGGGTATGG 57.246 45.455 0.00 0.00 0.00 2.74
8680 9109 7.901029 AGATATGTTCTGACTATGTGGGTATG 58.099 38.462 0.00 0.00 31.79 2.39
8681 9110 9.249053 CTAGATATGTTCTGACTATGTGGGTAT 57.751 37.037 0.00 0.00 35.79 2.73
8682 9111 8.225416 ACTAGATATGTTCTGACTATGTGGGTA 58.775 37.037 0.00 0.00 35.79 3.69
8683 9112 7.069986 ACTAGATATGTTCTGACTATGTGGGT 58.930 38.462 0.00 0.00 35.79 4.51
8684 9113 7.531857 ACTAGATATGTTCTGACTATGTGGG 57.468 40.000 0.00 0.00 35.79 4.61
8685 9114 8.735315 CCTACTAGATATGTTCTGACTATGTGG 58.265 40.741 0.00 0.00 35.79 4.17
8686 9115 9.508642 TCCTACTAGATATGTTCTGACTATGTG 57.491 37.037 0.00 0.00 35.79 3.21
8694 9123 9.593134 GGCATTATTCCTACTAGATATGTTCTG 57.407 37.037 0.00 0.00 35.79 3.02
8695 9124 8.470805 CGGCATTATTCCTACTAGATATGTTCT 58.529 37.037 0.00 0.00 38.57 3.01
8696 9125 8.467598 TCGGCATTATTCCTACTAGATATGTTC 58.532 37.037 0.00 0.00 0.00 3.18
8697 9126 8.251721 GTCGGCATTATTCCTACTAGATATGTT 58.748 37.037 0.00 0.00 0.00 2.71
8698 9127 7.147880 GGTCGGCATTATTCCTACTAGATATGT 60.148 40.741 0.00 0.00 0.00 2.29
8699 9128 7.203910 GGTCGGCATTATTCCTACTAGATATG 58.796 42.308 0.00 0.00 0.00 1.78
8700 9129 6.324254 GGGTCGGCATTATTCCTACTAGATAT 59.676 42.308 0.00 0.00 0.00 1.63
8701 9130 5.655532 GGGTCGGCATTATTCCTACTAGATA 59.344 44.000 0.00 0.00 0.00 1.98
8702 9131 4.466726 GGGTCGGCATTATTCCTACTAGAT 59.533 45.833 0.00 0.00 0.00 1.98
8703 9132 3.830755 GGGTCGGCATTATTCCTACTAGA 59.169 47.826 0.00 0.00 0.00 2.43
8704 9133 3.367087 CGGGTCGGCATTATTCCTACTAG 60.367 52.174 0.00 0.00 0.00 2.57
8705 9134 2.559668 CGGGTCGGCATTATTCCTACTA 59.440 50.000 0.00 0.00 0.00 1.82
8706 9135 1.343465 CGGGTCGGCATTATTCCTACT 59.657 52.381 0.00 0.00 0.00 2.57
8707 9136 1.069668 ACGGGTCGGCATTATTCCTAC 59.930 52.381 0.00 0.00 0.00 3.18
8708 9137 1.416243 ACGGGTCGGCATTATTCCTA 58.584 50.000 0.00 0.00 0.00 2.94
8709 9138 1.416243 TACGGGTCGGCATTATTCCT 58.584 50.000 0.00 0.00 0.00 3.36
8710 9139 2.140717 CTTACGGGTCGGCATTATTCC 58.859 52.381 0.00 0.00 0.00 3.01
8711 9140 2.798847 GTCTTACGGGTCGGCATTATTC 59.201 50.000 0.00 0.00 0.00 1.75
8712 9141 2.800629 CGTCTTACGGGTCGGCATTATT 60.801 50.000 0.00 0.00 38.08 1.40
8713 9142 1.269413 CGTCTTACGGGTCGGCATTAT 60.269 52.381 0.00 0.00 38.08 1.28
8714 9143 0.101040 CGTCTTACGGGTCGGCATTA 59.899 55.000 0.00 0.00 38.08 1.90
8715 9144 1.153706 CGTCTTACGGGTCGGCATT 60.154 57.895 0.00 0.00 38.08 3.56
8716 9145 2.493030 CGTCTTACGGGTCGGCAT 59.507 61.111 0.00 0.00 38.08 4.40
8717 9146 4.424566 GCGTCTTACGGGTCGGCA 62.425 66.667 1.25 0.00 42.82 5.69
8718 9147 2.340453 TATGCGTCTTACGGGTCGGC 62.340 60.000 1.25 0.00 42.82 5.54
8719 9148 0.313043 ATATGCGTCTTACGGGTCGG 59.687 55.000 1.25 0.00 42.82 4.79
8720 9149 2.031769 TGTATATGCGTCTTACGGGTCG 60.032 50.000 1.25 0.00 42.82 4.79
8721 9150 3.004106 ACTGTATATGCGTCTTACGGGTC 59.996 47.826 10.79 0.00 42.82 4.46
8722 9151 2.954318 ACTGTATATGCGTCTTACGGGT 59.046 45.455 10.79 3.62 42.82 5.28
8723 9152 3.637998 ACTGTATATGCGTCTTACGGG 57.362 47.619 10.79 3.17 42.82 5.28
8724 9153 3.662645 CGAACTGTATATGCGTCTTACGG 59.337 47.826 1.25 6.33 42.82 4.02
8725 9154 4.144221 CACGAACTGTATATGCGTCTTACG 59.856 45.833 0.00 0.00 45.88 3.18
8726 9155 5.268544 TCACGAACTGTATATGCGTCTTAC 58.731 41.667 0.00 0.00 32.27 2.34
8727 9156 5.488645 TCACGAACTGTATATGCGTCTTA 57.511 39.130 0.00 0.00 32.27 2.10
8728 9157 4.365899 TCACGAACTGTATATGCGTCTT 57.634 40.909 0.00 0.00 32.27 3.01
8729 9158 4.365899 TTCACGAACTGTATATGCGTCT 57.634 40.909 0.00 0.00 32.27 4.18
8730 9159 5.444586 TTTTCACGAACTGTATATGCGTC 57.555 39.130 0.00 0.00 32.27 5.19
8731 9160 5.849357 TTTTTCACGAACTGTATATGCGT 57.151 34.783 0.00 0.00 35.33 5.24
8750 9179 1.521906 GGCCCGCAAAACCGTTTTT 60.522 52.632 6.51 0.00 35.15 1.94
8751 9180 2.107343 GGCCCGCAAAACCGTTTT 59.893 55.556 3.29 3.29 0.00 2.43
8752 9181 4.273257 CGGCCCGCAAAACCGTTT 62.273 61.111 0.00 0.00 42.01 3.60
8774 9203 4.176752 CTAACTCTGCCCCCGCCC 62.177 72.222 0.00 0.00 0.00 6.13
8775 9204 3.081409 TCTAACTCTGCCCCCGCC 61.081 66.667 0.00 0.00 0.00 6.13
8776 9205 2.187163 GTCTAACTCTGCCCCCGC 59.813 66.667 0.00 0.00 0.00 6.13
8777 9206 2.732619 GGGTCTAACTCTGCCCCCG 61.733 68.421 0.00 0.00 35.18 5.73
8778 9207 3.321445 GGGTCTAACTCTGCCCCC 58.679 66.667 0.00 0.00 35.18 5.40
8780 9209 1.615424 TGGGGGTCTAACTCTGCCC 60.615 63.158 0.00 0.00 40.35 5.36
8781 9210 1.198759 TGTGGGGGTCTAACTCTGCC 61.199 60.000 0.00 0.00 0.00 4.85
8782 9211 0.690762 TTGTGGGGGTCTAACTCTGC 59.309 55.000 0.00 0.00 0.00 4.26
8783 9212 3.502123 TTTTGTGGGGGTCTAACTCTG 57.498 47.619 0.00 0.00 0.00 3.35
8784 9213 3.245264 CCATTTTGTGGGGGTCTAACTCT 60.245 47.826 0.00 0.00 44.79 3.24
8785 9214 3.089284 CCATTTTGTGGGGGTCTAACTC 58.911 50.000 0.00 0.00 44.79 3.01
8786 9215 3.169512 CCATTTTGTGGGGGTCTAACT 57.830 47.619 0.00 0.00 44.79 2.24
8814 9243 4.494484 GCAAAGCGGACCAATATCTTTTT 58.506 39.130 0.00 0.00 0.00 1.94
8815 9244 4.110036 GCAAAGCGGACCAATATCTTTT 57.890 40.909 0.00 0.00 0.00 2.27
8816 9245 3.782889 GCAAAGCGGACCAATATCTTT 57.217 42.857 0.00 0.00 0.00 2.52
8830 9259 1.810030 CGAGTAGACCCCGCAAAGC 60.810 63.158 0.00 0.00 0.00 3.51
8831 9260 1.153628 CCGAGTAGACCCCGCAAAG 60.154 63.158 0.00 0.00 0.00 2.77
8832 9261 2.975536 CCGAGTAGACCCCGCAAA 59.024 61.111 0.00 0.00 0.00 3.68
8833 9262 3.766691 GCCGAGTAGACCCCGCAA 61.767 66.667 0.00 0.00 0.00 4.85
8856 9285 2.819595 CTTGCGGGTCGATGTGGG 60.820 66.667 0.00 0.00 0.00 4.61
8857 9286 2.047274 ACTTGCGGGTCGATGTGG 60.047 61.111 0.00 0.00 0.00 4.17
8858 9287 1.354337 CTGACTTGCGGGTCGATGTG 61.354 60.000 0.00 0.00 38.91 3.21
8859 9288 1.079819 CTGACTTGCGGGTCGATGT 60.080 57.895 0.00 0.00 38.91 3.06
8860 9289 0.172578 TACTGACTTGCGGGTCGATG 59.827 55.000 0.00 0.00 38.91 3.84
8861 9290 0.892755 TTACTGACTTGCGGGTCGAT 59.107 50.000 0.00 0.00 38.91 3.59
8862 9291 0.892755 ATTACTGACTTGCGGGTCGA 59.107 50.000 4.78 0.00 38.91 4.20
8863 9292 1.722011 AATTACTGACTTGCGGGTCG 58.278 50.000 4.78 0.00 38.91 4.79
8864 9293 2.414161 GCAAATTACTGACTTGCGGGTC 60.414 50.000 2.46 2.46 36.44 4.46
8865 9294 1.539827 GCAAATTACTGACTTGCGGGT 59.460 47.619 0.00 0.00 36.44 5.28
8866 9295 1.539388 TGCAAATTACTGACTTGCGGG 59.461 47.619 2.00 0.00 46.70 6.13
8867 9296 2.987413 TGCAAATTACTGACTTGCGG 57.013 45.000 2.00 0.00 46.70 5.69
8868 9297 4.916831 TGAAATGCAAATTACTGACTTGCG 59.083 37.500 0.00 0.00 46.70 4.85
8869 9298 6.768029 TTGAAATGCAAATTACTGACTTGC 57.232 33.333 0.00 0.00 44.54 4.01
8870 9299 9.801714 GAAATTGAAATGCAAATTACTGACTTG 57.198 29.630 0.00 0.00 40.48 3.16
8871 9300 9.545105 TGAAATTGAAATGCAAATTACTGACTT 57.455 25.926 0.00 0.00 40.48 3.01
8872 9301 9.199982 CTGAAATTGAAATGCAAATTACTGACT 57.800 29.630 0.00 0.00 40.48 3.41
8873 9302 9.195411 TCTGAAATTGAAATGCAAATTACTGAC 57.805 29.630 0.00 0.00 40.48 3.51
8874 9303 9.195411 GTCTGAAATTGAAATGCAAATTACTGA 57.805 29.630 0.00 0.00 40.48 3.41
8875 9304 8.980610 TGTCTGAAATTGAAATGCAAATTACTG 58.019 29.630 0.00 0.00 40.48 2.74
8876 9305 9.715121 ATGTCTGAAATTGAAATGCAAATTACT 57.285 25.926 0.00 0.00 40.48 2.24
8877 9306 9.749490 CATGTCTGAAATTGAAATGCAAATTAC 57.251 29.630 0.00 0.00 40.48 1.89
8878 9307 9.708092 TCATGTCTGAAATTGAAATGCAAATTA 57.292 25.926 0.00 0.00 40.48 1.40
8879 9308 8.610248 TCATGTCTGAAATTGAAATGCAAATT 57.390 26.923 0.00 0.00 40.48 1.82
8880 9309 8.610248 TTCATGTCTGAAATTGAAATGCAAAT 57.390 26.923 0.00 0.00 38.43 2.32
8881 9310 8.434733 TTTCATGTCTGAAATTGAAATGCAAA 57.565 26.923 0.00 0.00 44.46 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.