Multiple sequence alignment - TraesCS2B01G246800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G246800 chr2B 100.000 2596 0 0 1 2596 250903969 250901374 0.000000e+00 4795
1 TraesCS2B01G246800 chr2A 93.379 1903 74 20 2 1877 209584632 209582755 0.000000e+00 2769
2 TraesCS2B01G246800 chr2A 93.600 250 9 5 1982 2227 209574212 209573966 1.470000e-97 366
3 TraesCS2B01G246800 chr2D 93.942 1172 32 10 695 1858 194807695 194806555 0.000000e+00 1735
4 TraesCS2B01G246800 chr2D 93.076 621 23 6 64 665 194808311 194807692 0.000000e+00 891
5 TraesCS2B01G246800 chr2D 92.568 148 5 4 1982 2126 194804625 194804481 9.420000e-50 207
6 TraesCS2B01G246800 chr2D 95.192 104 5 0 2124 2227 194803117 194803014 5.750000e-37 165
7 TraesCS2B01G246800 chr2D 90.291 103 5 4 1857 1958 468096846 468096944 2.100000e-26 130
8 TraesCS2B01G246800 chr2D 96.923 65 2 0 1 65 194808444 194808380 2.730000e-20 110
9 TraesCS2B01G246800 chr7D 90.826 109 5 4 1856 1963 489010686 489010790 9.690000e-30 141
10 TraesCS2B01G246800 chr1D 88.235 119 8 6 1844 1960 490029655 490029541 1.250000e-28 137
11 TraesCS2B01G246800 chr3D 91.262 103 4 4 1857 1958 26587713 26587811 4.510000e-28 135
12 TraesCS2B01G246800 chr3D 87.200 125 6 9 1857 1977 290583819 290583937 1.620000e-27 134
13 TraesCS2B01G246800 chr7B 90.476 105 5 4 1855 1958 159510700 159510600 1.620000e-27 134
14 TraesCS2B01G246800 chr5D 90.385 104 5 4 1856 1958 513514564 513514663 5.830000e-27 132
15 TraesCS2B01G246800 chr5D 89.623 106 5 5 1857 1961 540590956 540590856 2.100000e-26 130
16 TraesCS2B01G246800 chr4B 89.091 110 7 4 1857 1965 216815094 216814989 5.830000e-27 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G246800 chr2B 250901374 250903969 2595 True 4795.0 4795 100.0000 1 2596 1 chr2B.!!$R1 2595
1 TraesCS2B01G246800 chr2A 209582755 209584632 1877 True 2769.0 2769 93.3790 2 1877 1 chr2A.!!$R2 1875
2 TraesCS2B01G246800 chr2D 194803014 194808444 5430 True 621.6 1735 94.3402 1 2227 5 chr2D.!!$R1 2226

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
447 536 0.033504 TTTCAGACTGTCGGTGCTCC 59.966 55.0 7.78 0.0 0.0 4.7 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2401 5793 0.037975 GCGTGAAGTCGGGAAGGTTA 60.038 55.0 0.0 0.0 0.0 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
210 283 5.404366 GCGTTTGAGAAAAGGGGATAAAAAC 59.596 40.000 0.00 0.00 0.00 2.43
224 299 6.650390 GGGGATAAAAACGTTTGTGTCTAGTA 59.350 38.462 22.45 0.00 0.00 1.82
318 393 6.199937 ACAATACTTTAGAAAGCATGCTGG 57.800 37.500 23.48 8.14 39.63 4.85
447 536 0.033504 TTTCAGACTGTCGGTGCTCC 59.966 55.000 7.78 0.00 0.00 4.70
508 600 5.921962 ATATCAGTTTTTCTGGGGAAAGC 57.078 39.130 0.00 0.00 43.76 3.51
529 621 3.308866 GCGGTGTCGTTCTTAAGCATATT 59.691 43.478 0.00 0.00 38.89 1.28
577 669 3.701205 TTGGTACATGATGTGACTGCT 57.299 42.857 8.61 0.00 39.30 4.24
591 683 6.231258 TGTGACTGCTCATCAGATTCTATT 57.769 37.500 0.00 0.00 45.72 1.73
644 736 9.840427 ATTCGGTTAAATTTGTCATAACTCTTG 57.160 29.630 0.00 0.00 31.73 3.02
805 902 3.181468 GCATGTTACTCCCCTAGTGGTAC 60.181 52.174 0.00 0.00 39.39 3.34
806 903 4.287552 CATGTTACTCCCCTAGTGGTACT 58.712 47.826 0.00 0.00 39.39 2.73
807 904 3.705051 TGTTACTCCCCTAGTGGTACTG 58.295 50.000 0.00 0.00 39.39 2.74
808 905 3.029570 GTTACTCCCCTAGTGGTACTGG 58.970 54.545 0.00 0.00 39.39 4.00
809 906 1.090833 ACTCCCCTAGTGGTACTGGT 58.909 55.000 0.00 0.00 36.93 4.00
810 907 2.291354 ACTCCCCTAGTGGTACTGGTA 58.709 52.381 0.00 0.00 36.93 3.25
813 910 4.106019 ACTCCCCTAGTGGTACTGGTATAG 59.894 50.000 0.00 0.00 36.93 1.31
830 927 4.160626 GGTATAGTCATGACAGCCCTATCC 59.839 50.000 27.02 13.79 0.00 2.59
872 970 1.747355 CAATCATGGAGGCAAGTGTCC 59.253 52.381 0.00 0.00 0.00 4.02
971 1081 6.327279 GGTTTTTCACCTTTGCAGTATACT 57.673 37.500 0.00 0.00 43.29 2.12
972 1082 6.149633 GGTTTTTCACCTTTGCAGTATACTG 58.850 40.000 25.68 25.68 43.29 2.74
973 1083 6.238925 GGTTTTTCACCTTTGCAGTATACTGT 60.239 38.462 28.95 9.74 43.17 3.55
974 1084 7.040961 GGTTTTTCACCTTTGCAGTATACTGTA 60.041 37.037 28.95 24.06 43.17 2.74
1053 1163 7.690952 TTGTGACAAAACCTAACAAGTTACT 57.309 32.000 0.00 0.00 0.00 2.24
1057 1167 8.333186 GTGACAAAACCTAACAAGTTACTAGTG 58.667 37.037 5.39 0.00 0.00 2.74
1059 1169 8.797350 ACAAAACCTAACAAGTTACTAGTGTT 57.203 30.769 5.39 7.46 38.88 3.32
1066 1176 8.979574 CCTAACAAGTTACTAGTGTTTTCTCAG 58.020 37.037 5.39 0.41 36.83 3.35
1070 1180 9.099454 ACAAGTTACTAGTGTTTTCTCAGAAAG 57.901 33.333 5.39 0.00 0.00 2.62
1184 1294 1.067295 ACTGGAGGCCATCAAAGTCA 58.933 50.000 5.01 0.00 30.82 3.41
1351 1464 1.888215 CTGAAGAAGCCTGCAAGACA 58.112 50.000 0.00 0.00 34.07 3.41
1402 1515 2.401766 CCCAATGCTGCACTCGGAC 61.402 63.158 3.57 0.00 0.00 4.79
1405 1518 3.240134 AATGCTGCACTCGGACGGT 62.240 57.895 3.57 0.00 0.00 4.83
1407 1520 4.664677 GCTGCACTCGGACGGTGT 62.665 66.667 12.45 1.68 37.07 4.16
1715 1832 2.358615 GCATCCCTGTGTGTCGCA 60.359 61.111 0.00 0.00 0.00 5.10
1845 1963 8.888579 ATATAATGTAGTTCTCGGAAAACCTG 57.111 34.615 0.00 0.00 0.00 4.00
1870 1990 2.581074 GGAGTACTCCCTGCGTTCT 58.419 57.895 28.87 0.00 43.94 3.01
1874 1994 1.968493 AGTACTCCCTGCGTTCTGAAA 59.032 47.619 0.00 0.00 0.00 2.69
1877 1997 3.252974 ACTCCCTGCGTTCTGAAATAG 57.747 47.619 0.00 0.00 0.00 1.73
1878 1998 2.832129 ACTCCCTGCGTTCTGAAATAGA 59.168 45.455 0.00 0.00 0.00 1.98
1879 1999 3.452627 ACTCCCTGCGTTCTGAAATAGAT 59.547 43.478 0.00 0.00 34.80 1.98
1880 2000 4.649674 ACTCCCTGCGTTCTGAAATAGATA 59.350 41.667 0.00 0.00 34.80 1.98
1881 2001 5.201713 TCCCTGCGTTCTGAAATAGATAG 57.798 43.478 0.00 0.00 34.80 2.08
1882 2002 4.893524 TCCCTGCGTTCTGAAATAGATAGA 59.106 41.667 0.00 0.00 34.80 1.98
1883 2003 5.540337 TCCCTGCGTTCTGAAATAGATAGAT 59.460 40.000 0.00 0.00 34.80 1.98
1884 2004 5.636965 CCCTGCGTTCTGAAATAGATAGATG 59.363 44.000 0.00 0.00 34.80 2.90
1885 2005 6.450545 CCTGCGTTCTGAAATAGATAGATGA 58.549 40.000 0.00 0.00 34.80 2.92
1886 2006 6.364706 CCTGCGTTCTGAAATAGATAGATGAC 59.635 42.308 0.00 0.00 34.80 3.06
1887 2007 6.216569 TGCGTTCTGAAATAGATAGATGACC 58.783 40.000 0.00 0.00 34.80 4.02
1888 2008 5.635700 GCGTTCTGAAATAGATAGATGACCC 59.364 44.000 0.00 0.00 34.80 4.46
1889 2009 6.738731 GCGTTCTGAAATAGATAGATGACCCA 60.739 42.308 0.00 0.00 34.80 4.51
1890 2010 7.210174 CGTTCTGAAATAGATAGATGACCCAA 58.790 38.462 0.00 0.00 34.80 4.12
1891 2011 7.169982 CGTTCTGAAATAGATAGATGACCCAAC 59.830 40.741 0.00 0.00 34.80 3.77
1892 2012 6.749139 TCTGAAATAGATAGATGACCCAACG 58.251 40.000 0.00 0.00 0.00 4.10
1893 2013 6.323996 TCTGAAATAGATAGATGACCCAACGT 59.676 38.462 0.00 0.00 0.00 3.99
1894 2014 6.884832 TGAAATAGATAGATGACCCAACGTT 58.115 36.000 0.00 0.00 0.00 3.99
1895 2015 6.761242 TGAAATAGATAGATGACCCAACGTTG 59.239 38.462 21.47 21.47 0.00 4.10
1896 2016 5.871396 ATAGATAGATGACCCAACGTTGT 57.129 39.130 25.63 9.38 0.00 3.32
1897 2017 6.971726 ATAGATAGATGACCCAACGTTGTA 57.028 37.500 25.63 10.80 0.00 2.41
1898 2018 5.007385 AGATAGATGACCCAACGTTGTAC 57.993 43.478 25.63 16.28 0.00 2.90
1899 2019 4.710375 AGATAGATGACCCAACGTTGTACT 59.290 41.667 25.63 16.11 0.00 2.73
1900 2020 5.889853 AGATAGATGACCCAACGTTGTACTA 59.110 40.000 25.63 17.43 0.00 1.82
1901 2021 4.877378 AGATGACCCAACGTTGTACTAA 57.123 40.909 25.63 8.70 0.00 2.24
1902 2022 4.563061 AGATGACCCAACGTTGTACTAAC 58.437 43.478 25.63 13.06 0.00 2.34
1903 2023 4.282703 AGATGACCCAACGTTGTACTAACT 59.717 41.667 25.63 14.86 0.00 2.24
1904 2024 4.405116 TGACCCAACGTTGTACTAACTT 57.595 40.909 25.63 1.73 0.00 2.66
1905 2025 4.768583 TGACCCAACGTTGTACTAACTTT 58.231 39.130 25.63 0.22 0.00 2.66
1906 2026 4.571580 TGACCCAACGTTGTACTAACTTTG 59.428 41.667 25.63 14.66 31.63 2.77
1907 2027 4.516323 ACCCAACGTTGTACTAACTTTGT 58.484 39.130 25.63 5.30 30.37 2.83
1908 2028 5.669477 ACCCAACGTTGTACTAACTTTGTA 58.331 37.500 25.63 0.00 30.37 2.41
1909 2029 5.523552 ACCCAACGTTGTACTAACTTTGTAC 59.476 40.000 25.63 6.58 40.27 2.90
1910 2030 5.754890 CCCAACGTTGTACTAACTTTGTACT 59.245 40.000 25.63 0.00 40.44 2.73
1911 2031 6.922957 CCCAACGTTGTACTAACTTTGTACTA 59.077 38.462 25.63 4.86 40.44 1.82
1912 2032 7.437862 CCCAACGTTGTACTAACTTTGTACTAA 59.562 37.037 25.63 0.00 40.44 2.24
1913 2033 8.816144 CCAACGTTGTACTAACTTTGTACTAAA 58.184 33.333 25.63 0.67 40.44 1.85
1914 2034 9.839589 CAACGTTGTACTAACTTTGTACTAAAG 57.160 33.333 20.21 13.08 40.44 1.85
1915 2035 9.586435 AACGTTGTACTAACTTTGTACTAAAGT 57.414 29.630 0.00 14.04 41.82 2.66
1946 2066 5.880054 AGTTGGTCATCTATTTTGGAACG 57.120 39.130 0.00 0.00 0.00 3.95
1947 2067 4.700213 AGTTGGTCATCTATTTTGGAACGG 59.300 41.667 0.00 0.00 0.00 4.44
1948 2068 4.561500 TGGTCATCTATTTTGGAACGGA 57.438 40.909 0.00 0.00 0.00 4.69
1949 2069 4.513442 TGGTCATCTATTTTGGAACGGAG 58.487 43.478 0.00 0.00 0.00 4.63
1950 2070 4.224147 TGGTCATCTATTTTGGAACGGAGA 59.776 41.667 0.00 0.00 0.00 3.71
1965 2085 2.882137 ACGGAGAGAGTAGCAGATAAGC 59.118 50.000 0.00 0.00 0.00 3.09
1969 2089 4.022329 GGAGAGAGTAGCAGATAAGCTTCC 60.022 50.000 0.00 0.00 43.70 3.46
1971 2091 5.947663 AGAGAGTAGCAGATAAGCTTCCTA 58.052 41.667 0.00 0.00 43.70 2.94
1972 2092 6.003950 AGAGAGTAGCAGATAAGCTTCCTAG 58.996 44.000 0.00 0.00 43.70 3.02
2031 4055 3.368236 GCAGTTTCTGTCACCGTTAGATC 59.632 47.826 0.00 0.00 33.43 2.75
2041 4065 4.038763 GTCACCGTTAGATCCCATGTGATA 59.961 45.833 0.00 0.00 34.23 2.15
2057 4081 6.860539 CCATGTGATAGAGACTAGAACGAATG 59.139 42.308 0.00 0.00 0.00 2.67
2096 4120 1.205064 CGCAGTGGAAGAACTTGCG 59.795 57.895 2.71 2.71 39.47 4.85
2165 5557 2.004017 GGTCAGTGTCGTGTTTTGTGA 58.996 47.619 0.00 0.00 0.00 3.58
2172 5564 0.746204 TCGTGTTTTGTGAGCCAGCA 60.746 50.000 0.00 0.00 0.00 4.41
2216 5608 4.547671 AGAGAGAGACCCGATGGAATTTA 58.452 43.478 0.00 0.00 34.81 1.40
2220 5612 6.663734 AGAGAGACCCGATGGAATTTAATTT 58.336 36.000 0.00 0.00 34.81 1.82
2222 5614 7.934120 AGAGAGACCCGATGGAATTTAATTTAG 59.066 37.037 0.00 0.00 34.81 1.85
2227 5619 8.589701 ACCCGATGGAATTTAATTTAGAGTTT 57.410 30.769 0.00 0.00 34.81 2.66
2228 5620 9.031537 ACCCGATGGAATTTAATTTAGAGTTTT 57.968 29.630 0.00 0.00 34.81 2.43
2229 5621 9.869757 CCCGATGGAATTTAATTTAGAGTTTTT 57.130 29.630 0.00 0.00 0.00 1.94
2250 5642 3.569250 TTTACGGAAAGCCTTCATTGC 57.431 42.857 0.00 0.00 32.75 3.56
2251 5643 2.489938 TACGGAAAGCCTTCATTGCT 57.510 45.000 0.00 0.00 41.89 3.91
2252 5644 2.489938 ACGGAAAGCCTTCATTGCTA 57.510 45.000 0.00 0.00 38.34 3.49
2253 5645 2.359900 ACGGAAAGCCTTCATTGCTAG 58.640 47.619 0.00 0.00 38.34 3.42
2254 5646 1.064654 CGGAAAGCCTTCATTGCTAGC 59.935 52.381 8.10 8.10 38.34 3.42
2255 5647 2.373224 GGAAAGCCTTCATTGCTAGCT 58.627 47.619 17.23 0.00 38.34 3.32
2256 5648 2.757314 GGAAAGCCTTCATTGCTAGCTT 59.243 45.455 17.23 0.00 45.28 3.74
2262 5654 7.645058 AAGCCTTCATTGCTAGCTTTATTAA 57.355 32.000 17.23 0.25 40.76 1.40
2263 5655 7.032377 AGCCTTCATTGCTAGCTTTATTAAC 57.968 36.000 17.23 0.29 37.28 2.01
2264 5656 6.830838 AGCCTTCATTGCTAGCTTTATTAACT 59.169 34.615 17.23 2.74 37.28 2.24
2265 5657 7.340487 AGCCTTCATTGCTAGCTTTATTAACTT 59.660 33.333 17.23 0.00 37.28 2.66
2266 5658 7.645735 GCCTTCATTGCTAGCTTTATTAACTTC 59.354 37.037 17.23 0.00 0.00 3.01
2267 5659 7.852945 CCTTCATTGCTAGCTTTATTAACTTCG 59.147 37.037 17.23 0.00 0.00 3.79
2268 5660 8.487313 TTCATTGCTAGCTTTATTAACTTCGA 57.513 30.769 17.23 0.00 0.00 3.71
2269 5661 8.487313 TCATTGCTAGCTTTATTAACTTCGAA 57.513 30.769 17.23 0.00 0.00 3.71
2270 5662 9.109393 TCATTGCTAGCTTTATTAACTTCGAAT 57.891 29.630 17.23 0.00 0.00 3.34
2287 5679 8.783999 ACTTCGAATAATACTTACATCGACTG 57.216 34.615 0.00 0.00 36.89 3.51
2288 5680 7.378995 ACTTCGAATAATACTTACATCGACTGC 59.621 37.037 0.00 0.00 36.89 4.40
2289 5681 6.967135 TCGAATAATACTTACATCGACTGCT 58.033 36.000 0.00 0.00 34.16 4.24
2290 5682 8.091385 TCGAATAATACTTACATCGACTGCTA 57.909 34.615 0.00 0.00 34.16 3.49
2291 5683 8.562052 TCGAATAATACTTACATCGACTGCTAA 58.438 33.333 0.00 0.00 34.16 3.09
2292 5684 9.177304 CGAATAATACTTACATCGACTGCTAAA 57.823 33.333 0.00 0.00 32.61 1.85
2300 5692 9.821662 ACTTACATCGACTGCTAAAAATTTAAC 57.178 29.630 0.00 0.00 0.00 2.01
2301 5693 9.820229 CTTACATCGACTGCTAAAAATTTAACA 57.180 29.630 0.00 0.00 0.00 2.41
2304 5696 9.128107 ACATCGACTGCTAAAAATTTAACAATG 57.872 29.630 0.00 0.00 0.00 2.82
2305 5697 9.340695 CATCGACTGCTAAAAATTTAACAATGA 57.659 29.630 0.00 0.00 0.00 2.57
2306 5698 8.948853 TCGACTGCTAAAAATTTAACAATGAG 57.051 30.769 0.00 0.00 0.00 2.90
2307 5699 8.779303 TCGACTGCTAAAAATTTAACAATGAGA 58.221 29.630 0.00 0.00 0.00 3.27
2308 5700 9.393249 CGACTGCTAAAAATTTAACAATGAGAA 57.607 29.630 0.00 0.00 0.00 2.87
2316 5708 9.463443 AAAAATTTAACAATGAGAAACTCCGAG 57.537 29.630 0.00 0.00 0.00 4.63
2317 5709 6.743575 ATTTAACAATGAGAAACTCCGAGG 57.256 37.500 0.00 0.00 0.00 4.63
2318 5710 3.771577 AACAATGAGAAACTCCGAGGT 57.228 42.857 0.00 0.00 0.00 3.85
2319 5711 4.884668 AACAATGAGAAACTCCGAGGTA 57.115 40.909 0.00 0.00 0.00 3.08
2320 5712 4.189639 ACAATGAGAAACTCCGAGGTAC 57.810 45.455 0.00 0.00 0.00 3.34
2321 5713 3.179830 CAATGAGAAACTCCGAGGTACG 58.820 50.000 0.00 0.00 42.18 3.67
2322 5714 1.901591 TGAGAAACTCCGAGGTACGT 58.098 50.000 0.00 0.00 40.78 3.57
2323 5715 1.808945 TGAGAAACTCCGAGGTACGTC 59.191 52.381 5.47 5.47 40.78 4.34
2324 5716 1.132073 GAGAAACTCCGAGGTACGTCC 59.868 57.143 9.86 0.00 40.78 4.79
2325 5717 0.883833 GAAACTCCGAGGTACGTCCA 59.116 55.000 9.86 0.00 40.78 4.02
2326 5718 1.475682 GAAACTCCGAGGTACGTCCAT 59.524 52.381 9.86 0.00 40.78 3.41
2327 5719 1.101331 AACTCCGAGGTACGTCCATC 58.899 55.000 9.86 0.00 40.78 3.51
2328 5720 0.750911 ACTCCGAGGTACGTCCATCC 60.751 60.000 9.86 0.00 40.78 3.51
2329 5721 0.750546 CTCCGAGGTACGTCCATCCA 60.751 60.000 9.86 0.00 40.78 3.41
2330 5722 1.033746 TCCGAGGTACGTCCATCCAC 61.034 60.000 9.86 0.00 40.78 4.02
2331 5723 1.317431 CCGAGGTACGTCCATCCACA 61.317 60.000 9.86 0.00 40.78 4.17
2332 5724 0.179145 CGAGGTACGTCCATCCACAC 60.179 60.000 9.86 0.00 39.02 3.82
2333 5725 0.892755 GAGGTACGTCCATCCACACA 59.107 55.000 4.15 0.00 39.02 3.72
2334 5726 0.895530 AGGTACGTCCATCCACACAG 59.104 55.000 0.00 0.00 39.02 3.66
2335 5727 0.606604 GGTACGTCCATCCACACAGT 59.393 55.000 0.00 0.00 35.97 3.55
2336 5728 1.403780 GGTACGTCCATCCACACAGTC 60.404 57.143 0.00 0.00 35.97 3.51
2337 5729 0.524414 TACGTCCATCCACACAGTCG 59.476 55.000 0.00 0.00 0.00 4.18
2338 5730 1.446099 CGTCCATCCACACAGTCGG 60.446 63.158 0.00 0.00 0.00 4.79
2339 5731 1.873270 CGTCCATCCACACAGTCGGA 61.873 60.000 0.00 0.00 35.27 4.55
2340 5732 0.537188 GTCCATCCACACAGTCGGAT 59.463 55.000 0.00 0.00 42.96 4.18
2341 5733 1.066143 GTCCATCCACACAGTCGGATT 60.066 52.381 0.00 0.00 40.12 3.01
2342 5734 1.066215 TCCATCCACACAGTCGGATTG 60.066 52.381 0.00 0.00 40.12 2.67
2343 5735 1.339055 CCATCCACACAGTCGGATTGT 60.339 52.381 0.00 0.00 40.12 2.71
2344 5736 2.426522 CATCCACACAGTCGGATTGTT 58.573 47.619 3.12 0.00 40.12 2.83
2345 5737 2.163818 TCCACACAGTCGGATTGTTC 57.836 50.000 3.12 0.00 0.00 3.18
2346 5738 0.790207 CCACACAGTCGGATTGTTCG 59.210 55.000 3.12 0.00 0.00 3.95
2347 5739 1.497991 CACACAGTCGGATTGTTCGT 58.502 50.000 3.12 0.00 0.00 3.85
2348 5740 2.608506 CCACACAGTCGGATTGTTCGTA 60.609 50.000 3.12 0.00 0.00 3.43
2349 5741 2.407361 CACACAGTCGGATTGTTCGTAC 59.593 50.000 3.12 0.00 0.00 3.67
2350 5742 1.647213 CACAGTCGGATTGTTCGTACG 59.353 52.381 9.53 9.53 0.00 3.67
2351 5743 0.638746 CAGTCGGATTGTTCGTACGC 59.361 55.000 11.24 0.00 0.00 4.42
2352 5744 0.457337 AGTCGGATTGTTCGTACGCC 60.457 55.000 11.24 3.68 0.00 5.68
2353 5745 1.153784 TCGGATTGTTCGTACGCCC 60.154 57.895 11.24 3.60 0.00 6.13
2354 5746 2.169146 CGGATTGTTCGTACGCCCC 61.169 63.158 11.24 0.87 0.00 5.80
2355 5747 1.078988 GGATTGTTCGTACGCCCCA 60.079 57.895 11.24 3.76 0.00 4.96
2356 5748 0.463116 GGATTGTTCGTACGCCCCAT 60.463 55.000 11.24 0.26 0.00 4.00
2357 5749 1.375551 GATTGTTCGTACGCCCCATT 58.624 50.000 11.24 3.34 0.00 3.16
2358 5750 1.741145 GATTGTTCGTACGCCCCATTT 59.259 47.619 11.24 0.00 0.00 2.32
2359 5751 2.469274 TTGTTCGTACGCCCCATTTA 57.531 45.000 11.24 0.00 0.00 1.40
2360 5752 2.012937 TGTTCGTACGCCCCATTTAG 57.987 50.000 11.24 0.00 0.00 1.85
2361 5753 0.654160 GTTCGTACGCCCCATTTAGC 59.346 55.000 11.24 0.00 0.00 3.09
2362 5754 0.538118 TTCGTACGCCCCATTTAGCT 59.462 50.000 11.24 0.00 0.00 3.32
2363 5755 1.401761 TCGTACGCCCCATTTAGCTA 58.598 50.000 11.24 0.00 0.00 3.32
2364 5756 1.338973 TCGTACGCCCCATTTAGCTAG 59.661 52.381 11.24 0.00 0.00 3.42
2365 5757 1.509703 GTACGCCCCATTTAGCTAGC 58.490 55.000 6.62 6.62 0.00 3.42
2366 5758 1.070289 GTACGCCCCATTTAGCTAGCT 59.930 52.381 23.12 23.12 0.00 3.32
2367 5759 0.106894 ACGCCCCATTTAGCTAGCTC 59.893 55.000 23.26 2.81 0.00 4.09
2368 5760 0.106708 CGCCCCATTTAGCTAGCTCA 59.893 55.000 23.26 7.73 0.00 4.26
2369 5761 1.271054 CGCCCCATTTAGCTAGCTCAT 60.271 52.381 23.26 12.10 0.00 2.90
2370 5762 2.157738 GCCCCATTTAGCTAGCTCATG 58.842 52.381 23.26 22.53 0.00 3.07
2371 5763 2.224621 GCCCCATTTAGCTAGCTCATGA 60.225 50.000 27.37 9.22 0.00 3.07
2372 5764 3.672808 CCCCATTTAGCTAGCTCATGAG 58.327 50.000 27.37 18.84 0.00 2.90
2389 5781 6.737720 TCATGAGCCACTGATTCTATTACT 57.262 37.500 0.00 0.00 0.00 2.24
2390 5782 7.839680 TCATGAGCCACTGATTCTATTACTA 57.160 36.000 0.00 0.00 0.00 1.82
2391 5783 8.427902 TCATGAGCCACTGATTCTATTACTAT 57.572 34.615 0.00 0.00 0.00 2.12
2392 5784 8.309656 TCATGAGCCACTGATTCTATTACTATG 58.690 37.037 0.00 0.00 0.00 2.23
2393 5785 6.459066 TGAGCCACTGATTCTATTACTATGC 58.541 40.000 0.00 0.00 0.00 3.14
2394 5786 6.268617 TGAGCCACTGATTCTATTACTATGCT 59.731 38.462 0.00 0.00 0.00 3.79
2395 5787 6.696411 AGCCACTGATTCTATTACTATGCTC 58.304 40.000 0.00 0.00 0.00 4.26
2396 5788 6.268617 AGCCACTGATTCTATTACTATGCTCA 59.731 38.462 0.00 0.00 0.00 4.26
2397 5789 6.931281 GCCACTGATTCTATTACTATGCTCAA 59.069 38.462 0.00 0.00 0.00 3.02
2398 5790 7.605691 GCCACTGATTCTATTACTATGCTCAAT 59.394 37.037 0.00 0.00 0.00 2.57
2411 5803 3.536956 TGCTCAATAGTAACCTTCCCG 57.463 47.619 0.00 0.00 0.00 5.14
2412 5804 3.101437 TGCTCAATAGTAACCTTCCCGA 58.899 45.455 0.00 0.00 0.00 5.14
2413 5805 3.118884 TGCTCAATAGTAACCTTCCCGAC 60.119 47.826 0.00 0.00 0.00 4.79
2414 5806 3.132467 GCTCAATAGTAACCTTCCCGACT 59.868 47.826 0.00 0.00 0.00 4.18
2415 5807 4.382793 GCTCAATAGTAACCTTCCCGACTT 60.383 45.833 0.00 0.00 0.00 3.01
2416 5808 5.334724 TCAATAGTAACCTTCCCGACTTC 57.665 43.478 0.00 0.00 0.00 3.01
2417 5809 4.773674 TCAATAGTAACCTTCCCGACTTCA 59.226 41.667 0.00 0.00 0.00 3.02
2418 5810 4.732672 ATAGTAACCTTCCCGACTTCAC 57.267 45.455 0.00 0.00 0.00 3.18
2419 5811 1.271656 AGTAACCTTCCCGACTTCACG 59.728 52.381 0.00 0.00 0.00 4.35
2420 5812 0.037975 TAACCTTCCCGACTTCACGC 60.038 55.000 0.00 0.00 0.00 5.34
2421 5813 2.035237 AACCTTCCCGACTTCACGCA 62.035 55.000 0.00 0.00 0.00 5.24
2422 5814 1.301401 CCTTCCCGACTTCACGCAA 60.301 57.895 0.00 0.00 0.00 4.85
2423 5815 0.673644 CCTTCCCGACTTCACGCAAT 60.674 55.000 0.00 0.00 0.00 3.56
2424 5816 1.404986 CCTTCCCGACTTCACGCAATA 60.405 52.381 0.00 0.00 0.00 1.90
2425 5817 2.343101 CTTCCCGACTTCACGCAATAA 58.657 47.619 0.00 0.00 0.00 1.40
2426 5818 1.717194 TCCCGACTTCACGCAATAAC 58.283 50.000 0.00 0.00 0.00 1.89
2427 5819 1.274167 TCCCGACTTCACGCAATAACT 59.726 47.619 0.00 0.00 0.00 2.24
2428 5820 1.659098 CCCGACTTCACGCAATAACTC 59.341 52.381 0.00 0.00 0.00 3.01
2429 5821 2.607187 CCGACTTCACGCAATAACTCT 58.393 47.619 0.00 0.00 0.00 3.24
2430 5822 3.428452 CCCGACTTCACGCAATAACTCTA 60.428 47.826 0.00 0.00 0.00 2.43
2431 5823 4.360563 CCGACTTCACGCAATAACTCTAT 58.639 43.478 0.00 0.00 0.00 1.98
2432 5824 4.207224 CCGACTTCACGCAATAACTCTATG 59.793 45.833 0.00 0.00 0.00 2.23
2433 5825 4.317418 CGACTTCACGCAATAACTCTATGC 60.317 45.833 0.00 0.00 0.00 3.14
2434 5826 4.503910 ACTTCACGCAATAACTCTATGCA 58.496 39.130 0.00 0.00 0.00 3.96
2435 5827 4.935205 ACTTCACGCAATAACTCTATGCAA 59.065 37.500 0.00 0.00 0.00 4.08
2436 5828 5.586243 ACTTCACGCAATAACTCTATGCAAT 59.414 36.000 0.00 0.00 0.00 3.56
2437 5829 5.657470 TCACGCAATAACTCTATGCAATC 57.343 39.130 0.00 0.00 0.00 2.67
2438 5830 5.115480 TCACGCAATAACTCTATGCAATCA 58.885 37.500 0.00 0.00 0.00 2.57
2439 5831 5.759763 TCACGCAATAACTCTATGCAATCAT 59.240 36.000 0.00 0.00 36.73 2.45
2440 5832 6.073602 TCACGCAATAACTCTATGCAATCATC 60.074 38.462 0.00 0.00 34.22 2.92
2441 5833 5.994054 ACGCAATAACTCTATGCAATCATCT 59.006 36.000 0.00 0.00 34.22 2.90
2442 5834 7.116805 CACGCAATAACTCTATGCAATCATCTA 59.883 37.037 0.00 0.00 34.22 1.98
2443 5835 7.330454 ACGCAATAACTCTATGCAATCATCTAG 59.670 37.037 0.00 0.00 34.22 2.43
2444 5836 7.330454 CGCAATAACTCTATGCAATCATCTAGT 59.670 37.037 0.00 0.00 34.22 2.57
2445 5837 9.645059 GCAATAACTCTATGCAATCATCTAGTA 57.355 33.333 0.00 0.00 34.22 1.82
2450 5842 8.427902 ACTCTATGCAATCATCTAGTATTGGA 57.572 34.615 13.36 11.80 37.74 3.53
2451 5843 8.530311 ACTCTATGCAATCATCTAGTATTGGAG 58.470 37.037 13.36 12.69 36.95 3.86
2452 5844 7.326454 TCTATGCAATCATCTAGTATTGGAGC 58.674 38.462 13.36 0.00 36.95 4.70
2453 5845 5.557576 TGCAATCATCTAGTATTGGAGCT 57.442 39.130 13.36 0.00 34.37 4.09
2454 5846 5.303165 TGCAATCATCTAGTATTGGAGCTG 58.697 41.667 0.00 0.00 34.37 4.24
2455 5847 4.153835 GCAATCATCTAGTATTGGAGCTGC 59.846 45.833 0.00 0.00 34.37 5.25
2456 5848 3.650070 TCATCTAGTATTGGAGCTGCG 57.350 47.619 0.00 0.00 0.00 5.18
2457 5849 3.222603 TCATCTAGTATTGGAGCTGCGA 58.777 45.455 0.00 0.00 0.00 5.10
2458 5850 3.004839 TCATCTAGTATTGGAGCTGCGAC 59.995 47.826 0.00 0.00 0.00 5.19
2459 5851 1.681793 TCTAGTATTGGAGCTGCGACC 59.318 52.381 0.00 10.93 0.00 4.79
2460 5852 1.409064 CTAGTATTGGAGCTGCGACCA 59.591 52.381 15.24 15.24 0.00 4.02
2461 5853 0.833287 AGTATTGGAGCTGCGACCAT 59.167 50.000 18.62 12.63 36.02 3.55
2462 5854 2.039418 AGTATTGGAGCTGCGACCATA 58.961 47.619 18.62 11.86 36.02 2.74
2463 5855 2.036475 AGTATTGGAGCTGCGACCATAG 59.964 50.000 18.62 0.00 36.02 2.23
2464 5856 1.123077 ATTGGAGCTGCGACCATAGA 58.877 50.000 18.62 7.93 36.02 1.98
2465 5857 0.901827 TTGGAGCTGCGACCATAGAA 59.098 50.000 18.62 5.10 36.02 2.10
2466 5858 1.123077 TGGAGCTGCGACCATAGAAT 58.877 50.000 15.24 0.00 0.00 2.40
2467 5859 1.069204 TGGAGCTGCGACCATAGAATC 59.931 52.381 15.24 0.00 0.00 2.52
2468 5860 1.342819 GGAGCTGCGACCATAGAATCT 59.657 52.381 12.49 0.00 0.00 2.40
2469 5861 2.609244 GGAGCTGCGACCATAGAATCTC 60.609 54.545 12.49 0.00 0.00 2.75
2470 5862 2.295909 GAGCTGCGACCATAGAATCTCT 59.704 50.000 0.00 0.00 0.00 3.10
2471 5863 2.295909 AGCTGCGACCATAGAATCTCTC 59.704 50.000 0.00 0.00 0.00 3.20
2472 5864 2.035193 GCTGCGACCATAGAATCTCTCA 59.965 50.000 0.00 0.00 0.00 3.27
2473 5865 3.305950 GCTGCGACCATAGAATCTCTCAT 60.306 47.826 0.00 0.00 0.00 2.90
2474 5866 4.236147 CTGCGACCATAGAATCTCTCATG 58.764 47.826 0.00 0.00 0.00 3.07
2475 5867 3.891366 TGCGACCATAGAATCTCTCATGA 59.109 43.478 0.00 0.00 0.00 3.07
2476 5868 4.022503 TGCGACCATAGAATCTCTCATGAG 60.023 45.833 17.07 17.07 41.51 2.90
2477 5869 4.484236 CGACCATAGAATCTCTCATGAGC 58.516 47.826 18.36 3.48 40.03 4.26
2478 5870 4.617995 CGACCATAGAATCTCTCATGAGCC 60.618 50.000 18.36 4.59 40.03 4.70
2479 5871 4.229639 ACCATAGAATCTCTCATGAGCCA 58.770 43.478 18.36 6.86 40.03 4.75
2480 5872 4.040217 ACCATAGAATCTCTCATGAGCCAC 59.960 45.833 18.36 7.35 40.03 5.01
2481 5873 4.283978 CCATAGAATCTCTCATGAGCCACT 59.716 45.833 18.36 13.51 40.03 4.00
2482 5874 5.479724 CCATAGAATCTCTCATGAGCCACTA 59.520 44.000 18.36 14.98 40.03 2.74
2483 5875 4.935352 AGAATCTCTCATGAGCCACTAC 57.065 45.455 18.36 7.53 40.03 2.73
2484 5876 4.285020 AGAATCTCTCATGAGCCACTACA 58.715 43.478 18.36 0.00 40.03 2.74
2485 5877 4.900652 AGAATCTCTCATGAGCCACTACAT 59.099 41.667 18.36 0.00 40.03 2.29
2486 5878 4.870123 ATCTCTCATGAGCCACTACATC 57.130 45.455 18.36 0.00 40.03 3.06
2487 5879 2.620585 TCTCTCATGAGCCACTACATCG 59.379 50.000 18.36 0.00 40.03 3.84
2488 5880 2.620585 CTCTCATGAGCCACTACATCGA 59.379 50.000 18.36 0.00 33.12 3.59
2489 5881 2.620585 TCTCATGAGCCACTACATCGAG 59.379 50.000 18.36 0.00 0.00 4.04
2490 5882 1.067669 TCATGAGCCACTACATCGAGC 59.932 52.381 0.00 0.00 0.00 5.03
2491 5883 0.390860 ATGAGCCACTACATCGAGCC 59.609 55.000 0.00 0.00 0.00 4.70
2492 5884 1.068250 GAGCCACTACATCGAGCCC 59.932 63.158 0.00 0.00 0.00 5.19
2493 5885 1.676678 GAGCCACTACATCGAGCCCA 61.677 60.000 0.00 0.00 0.00 5.36
2494 5886 1.521681 GCCACTACATCGAGCCCAC 60.522 63.158 0.00 0.00 0.00 4.61
2495 5887 1.226974 CCACTACATCGAGCCCACG 60.227 63.158 0.00 0.00 0.00 4.94
2496 5888 1.663379 CCACTACATCGAGCCCACGA 61.663 60.000 0.00 0.00 46.04 4.35
2497 5889 0.525668 CACTACATCGAGCCCACGAC 60.526 60.000 0.00 0.00 44.84 4.34
2498 5890 1.065928 CTACATCGAGCCCACGACC 59.934 63.158 0.00 0.00 44.84 4.79
2499 5891 1.379443 TACATCGAGCCCACGACCT 60.379 57.895 0.00 0.00 44.84 3.85
2500 5892 0.107066 TACATCGAGCCCACGACCTA 60.107 55.000 0.00 0.00 44.84 3.08
2501 5893 1.360551 CATCGAGCCCACGACCTAG 59.639 63.158 0.00 0.00 44.84 3.02
2502 5894 1.101635 CATCGAGCCCACGACCTAGA 61.102 60.000 0.00 0.00 44.84 2.43
2503 5895 0.395311 ATCGAGCCCACGACCTAGAA 60.395 55.000 0.00 0.00 44.84 2.10
2504 5896 0.395311 TCGAGCCCACGACCTAGAAT 60.395 55.000 0.00 0.00 37.37 2.40
2505 5897 0.249073 CGAGCCCACGACCTAGAATG 60.249 60.000 0.00 0.00 35.09 2.67
2506 5898 0.824759 GAGCCCACGACCTAGAATGT 59.175 55.000 0.00 0.00 0.00 2.71
2507 5899 0.824759 AGCCCACGACCTAGAATGTC 59.175 55.000 0.00 0.00 0.00 3.06
2508 5900 0.179081 GCCCACGACCTAGAATGTCC 60.179 60.000 0.00 0.00 0.00 4.02
2509 5901 0.464452 CCCACGACCTAGAATGTCCC 59.536 60.000 0.00 0.00 0.00 4.46
2510 5902 1.486211 CCACGACCTAGAATGTCCCT 58.514 55.000 0.00 0.00 0.00 4.20
2511 5903 1.831736 CCACGACCTAGAATGTCCCTT 59.168 52.381 0.00 0.00 0.00 3.95
2512 5904 2.418746 CCACGACCTAGAATGTCCCTTG 60.419 54.545 0.00 0.00 0.00 3.61
2513 5905 2.233922 CACGACCTAGAATGTCCCTTGT 59.766 50.000 0.00 0.00 0.00 3.16
2514 5906 2.904434 ACGACCTAGAATGTCCCTTGTT 59.096 45.455 0.00 0.00 0.00 2.83
2515 5907 4.081862 CACGACCTAGAATGTCCCTTGTTA 60.082 45.833 0.00 0.00 0.00 2.41
2516 5908 4.529377 ACGACCTAGAATGTCCCTTGTTAA 59.471 41.667 0.00 0.00 0.00 2.01
2517 5909 5.109903 CGACCTAGAATGTCCCTTGTTAAG 58.890 45.833 0.00 0.00 0.00 1.85
2518 5910 5.105473 CGACCTAGAATGTCCCTTGTTAAGA 60.105 44.000 0.00 0.00 0.00 2.10
2519 5911 6.051179 ACCTAGAATGTCCCTTGTTAAGAC 57.949 41.667 0.00 0.00 0.00 3.01
2520 5912 5.546499 ACCTAGAATGTCCCTTGTTAAGACA 59.454 40.000 0.00 0.00 44.11 3.41
2527 5919 6.928348 TGTCCCTTGTTAAGACATAGAGAA 57.072 37.500 0.00 0.00 35.67 2.87
2528 5920 7.496346 TGTCCCTTGTTAAGACATAGAGAAT 57.504 36.000 0.00 0.00 35.67 2.40
2529 5921 7.556844 TGTCCCTTGTTAAGACATAGAGAATC 58.443 38.462 0.00 0.00 35.67 2.52
2530 5922 6.987404 GTCCCTTGTTAAGACATAGAGAATCC 59.013 42.308 0.00 0.00 35.29 3.01
2531 5923 6.672218 TCCCTTGTTAAGACATAGAGAATCCA 59.328 38.462 0.00 0.00 35.29 3.41
2532 5924 6.763610 CCCTTGTTAAGACATAGAGAATCCAC 59.236 42.308 0.00 0.00 35.29 4.02
2533 5925 6.763610 CCTTGTTAAGACATAGAGAATCCACC 59.236 42.308 0.00 0.00 35.29 4.61
2534 5926 6.867519 TGTTAAGACATAGAGAATCCACCA 57.132 37.500 0.00 0.00 33.66 4.17
2535 5927 6.640518 TGTTAAGACATAGAGAATCCACCAC 58.359 40.000 0.00 0.00 33.66 4.16
2536 5928 6.212589 TGTTAAGACATAGAGAATCCACCACA 59.787 38.462 0.00 0.00 33.66 4.17
2537 5929 5.762179 AAGACATAGAGAATCCACCACAA 57.238 39.130 0.00 0.00 33.66 3.33
2538 5930 5.965033 AGACATAGAGAATCCACCACAAT 57.035 39.130 0.00 0.00 33.66 2.71
2539 5931 5.678583 AGACATAGAGAATCCACCACAATG 58.321 41.667 0.00 0.00 33.66 2.82
2540 5932 5.426509 AGACATAGAGAATCCACCACAATGA 59.573 40.000 0.00 0.00 33.66 2.57
2541 5933 6.100859 AGACATAGAGAATCCACCACAATGAT 59.899 38.462 0.00 0.00 33.66 2.45
2542 5934 7.290948 AGACATAGAGAATCCACCACAATGATA 59.709 37.037 0.00 0.00 33.66 2.15
2543 5935 7.982252 ACATAGAGAATCCACCACAATGATAT 58.018 34.615 0.00 0.00 33.66 1.63
2544 5936 8.443176 ACATAGAGAATCCACCACAATGATATT 58.557 33.333 0.00 0.00 33.66 1.28
2545 5937 8.727910 CATAGAGAATCCACCACAATGATATTG 58.272 37.037 0.28 0.28 33.66 1.90
2546 5938 6.666678 AGAGAATCCACCACAATGATATTGT 58.333 36.000 1.55 1.55 33.66 2.71
2547 5939 6.769822 AGAGAATCCACCACAATGATATTGTC 59.230 38.462 4.32 0.00 33.66 3.18
2548 5940 5.829924 AGAATCCACCACAATGATATTGTCC 59.170 40.000 4.32 0.00 0.00 4.02
2549 5941 4.582973 TCCACCACAATGATATTGTCCA 57.417 40.909 4.32 0.00 0.00 4.02
2550 5942 5.128033 TCCACCACAATGATATTGTCCAT 57.872 39.130 4.32 0.00 0.00 3.41
2551 5943 5.517924 TCCACCACAATGATATTGTCCATT 58.482 37.500 4.32 0.00 33.66 3.16
2552 5944 5.593909 TCCACCACAATGATATTGTCCATTC 59.406 40.000 4.32 0.00 31.25 2.67
2553 5945 5.595542 CCACCACAATGATATTGTCCATTCT 59.404 40.000 4.32 0.00 31.25 2.40
2554 5946 6.238842 CCACCACAATGATATTGTCCATTCTC 60.239 42.308 4.32 0.00 31.25 2.87
2555 5947 6.319405 CACCACAATGATATTGTCCATTCTCA 59.681 38.462 4.32 0.00 31.25 3.27
2556 5948 6.319658 ACCACAATGATATTGTCCATTCTCAC 59.680 38.462 4.32 0.00 31.25 3.51
2557 5949 6.544931 CCACAATGATATTGTCCATTCTCACT 59.455 38.462 4.32 0.00 31.25 3.41
2558 5950 7.716560 CCACAATGATATTGTCCATTCTCACTA 59.283 37.037 4.32 0.00 31.25 2.74
2559 5951 8.771766 CACAATGATATTGTCCATTCTCACTAG 58.228 37.037 4.32 0.00 31.25 2.57
2560 5952 7.443575 ACAATGATATTGTCCATTCTCACTAGC 59.556 37.037 1.55 0.00 31.25 3.42
2561 5953 6.484364 TGATATTGTCCATTCTCACTAGCA 57.516 37.500 0.00 0.00 0.00 3.49
2562 5954 6.283694 TGATATTGTCCATTCTCACTAGCAC 58.716 40.000 0.00 0.00 0.00 4.40
2563 5955 4.558226 ATTGTCCATTCTCACTAGCACA 57.442 40.909 0.00 0.00 0.00 4.57
2564 5956 4.558226 TTGTCCATTCTCACTAGCACAT 57.442 40.909 0.00 0.00 0.00 3.21
2565 5957 4.558226 TGTCCATTCTCACTAGCACATT 57.442 40.909 0.00 0.00 0.00 2.71
2566 5958 4.256110 TGTCCATTCTCACTAGCACATTG 58.744 43.478 0.00 0.00 0.00 2.82
2567 5959 4.256920 GTCCATTCTCACTAGCACATTGT 58.743 43.478 0.00 0.00 0.00 2.71
2568 5960 4.697352 GTCCATTCTCACTAGCACATTGTT 59.303 41.667 0.00 0.00 0.00 2.83
2569 5961 4.696877 TCCATTCTCACTAGCACATTGTTG 59.303 41.667 0.00 0.00 0.00 3.33
2570 5962 4.409570 CATTCTCACTAGCACATTGTTGC 58.590 43.478 0.00 3.86 43.34 4.17
2571 5963 3.124578 TCTCACTAGCACATTGTTGCA 57.875 42.857 11.85 0.00 45.62 4.08
2572 5964 3.678289 TCTCACTAGCACATTGTTGCAT 58.322 40.909 11.85 3.00 45.62 3.96
2573 5965 3.686241 TCTCACTAGCACATTGTTGCATC 59.314 43.478 11.85 0.00 45.62 3.91
2574 5966 3.678289 TCACTAGCACATTGTTGCATCT 58.322 40.909 11.85 0.00 45.62 2.90
2575 5967 4.831107 TCACTAGCACATTGTTGCATCTA 58.169 39.130 11.85 0.00 45.62 1.98
2576 5968 5.244755 TCACTAGCACATTGTTGCATCTAA 58.755 37.500 11.85 0.00 45.62 2.10
2577 5969 5.352293 TCACTAGCACATTGTTGCATCTAAG 59.648 40.000 11.85 0.00 45.62 2.18
2578 5970 4.637534 ACTAGCACATTGTTGCATCTAAGG 59.362 41.667 11.85 0.00 45.62 2.69
2579 5971 2.165030 AGCACATTGTTGCATCTAAGGC 59.835 45.455 11.85 0.00 45.62 4.35
2580 5972 2.165030 GCACATTGTTGCATCTAAGGCT 59.835 45.455 0.00 0.00 42.49 4.58
2581 5973 3.367703 GCACATTGTTGCATCTAAGGCTT 60.368 43.478 4.58 4.58 42.49 4.35
2582 5974 4.813027 CACATTGTTGCATCTAAGGCTTT 58.187 39.130 4.45 0.00 0.00 3.51
2583 5975 4.624024 CACATTGTTGCATCTAAGGCTTTG 59.376 41.667 4.45 3.09 0.00 2.77
2584 5976 3.940209 TTGTTGCATCTAAGGCTTTGG 57.060 42.857 4.45 0.00 0.00 3.28
2585 5977 3.153369 TGTTGCATCTAAGGCTTTGGA 57.847 42.857 4.45 5.02 0.00 3.53
2586 5978 3.700538 TGTTGCATCTAAGGCTTTGGAT 58.299 40.909 4.45 7.30 35.16 3.41
2587 5979 4.088634 TGTTGCATCTAAGGCTTTGGATT 58.911 39.130 4.45 0.00 32.80 3.01
2588 5980 5.260424 TGTTGCATCTAAGGCTTTGGATTA 58.740 37.500 4.45 0.00 32.80 1.75
2589 5981 5.357878 TGTTGCATCTAAGGCTTTGGATTAG 59.642 40.000 4.45 0.00 32.80 1.73
2590 5982 3.885297 TGCATCTAAGGCTTTGGATTAGC 59.115 43.478 4.45 7.37 32.80 3.09
2591 5983 4.140536 GCATCTAAGGCTTTGGATTAGCT 58.859 43.478 4.45 0.00 38.67 3.32
2592 5984 4.582240 GCATCTAAGGCTTTGGATTAGCTT 59.418 41.667 4.45 0.00 38.67 3.74
2593 5985 5.278218 GCATCTAAGGCTTTGGATTAGCTTC 60.278 44.000 4.45 0.00 38.67 3.86
2594 5986 5.435686 TCTAAGGCTTTGGATTAGCTTCA 57.564 39.130 4.45 0.00 38.67 3.02
2595 5987 5.815581 TCTAAGGCTTTGGATTAGCTTCAA 58.184 37.500 4.45 0.00 38.67 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
188 261 6.509656 ACGTTTTTATCCCCTTTTCTCAAAC 58.490 36.000 0.00 0.00 0.00 2.93
210 283 7.148853 GGTGTAAAGATGTACTAGACACAAACG 60.149 40.741 0.00 0.00 42.17 3.60
224 299 4.511527 CAGCATCTGAGGTGTAAAGATGT 58.488 43.478 12.14 0.00 45.92 3.06
379 454 2.978156 AGGAGGAAGCAAATGGACAA 57.022 45.000 0.00 0.00 0.00 3.18
447 536 2.258755 TGAGTTGTACATGATGCGACG 58.741 47.619 0.00 0.00 32.70 5.12
508 600 5.464965 AAATATGCTTAAGAACGACACCG 57.535 39.130 6.67 0.00 42.50 4.94
529 621 7.644551 ACGATTTTCGCAATAAAAACACTGTAA 59.355 29.630 0.00 0.00 45.12 2.41
577 669 7.405292 ACCTTTGTTCCAATAGAATCTGATGA 58.595 34.615 0.00 0.00 36.69 2.92
591 683 5.076182 TGCAGAAATGATACCTTTGTTCCA 58.924 37.500 0.00 0.00 0.00 3.53
644 736 8.627208 TCTAATCAATTCATTCTCCTAATGCC 57.373 34.615 0.00 0.00 0.00 4.40
671 763 3.941483 GAGTTATCATGTCCACCCAACAG 59.059 47.826 0.00 0.00 0.00 3.16
710 802 3.058016 CCACACAACAAATCAGCCTAGTG 60.058 47.826 0.00 0.00 0.00 2.74
805 902 2.968574 AGGGCTGTCATGACTATACCAG 59.031 50.000 25.55 14.69 0.00 4.00
806 903 3.046283 AGGGCTGTCATGACTATACCA 57.954 47.619 25.55 4.39 0.00 3.25
807 904 4.160626 GGATAGGGCTGTCATGACTATACC 59.839 50.000 25.55 20.32 0.00 2.73
808 905 5.020132 AGGATAGGGCTGTCATGACTATAC 58.980 45.833 25.55 15.05 0.00 1.47
809 906 5.276694 AGGATAGGGCTGTCATGACTATA 57.723 43.478 25.55 11.70 0.00 1.31
810 907 4.139162 AGGATAGGGCTGTCATGACTAT 57.861 45.455 25.55 14.60 0.00 2.12
813 910 2.703007 AGAAGGATAGGGCTGTCATGAC 59.297 50.000 19.27 19.27 0.00 3.06
830 927 5.059161 TGTCACTTGAGAAACATGGAGAAG 58.941 41.667 0.00 0.00 0.00 2.85
872 970 6.923508 TGCAAGATGAGAGGTGTATAATAACG 59.076 38.462 0.00 0.00 0.00 3.18
968 1078 1.203137 AGACAGGGGCAGTGTACAGTA 60.203 52.381 2.08 0.00 0.00 2.74
969 1079 0.471971 AGACAGGGGCAGTGTACAGT 60.472 55.000 0.00 0.00 0.00 3.55
970 1080 0.247736 GAGACAGGGGCAGTGTACAG 59.752 60.000 0.00 0.00 0.00 2.74
971 1081 1.192146 GGAGACAGGGGCAGTGTACA 61.192 60.000 0.00 0.00 0.00 2.90
972 1082 0.905337 AGGAGACAGGGGCAGTGTAC 60.905 60.000 0.00 0.00 0.00 2.90
973 1083 0.614979 GAGGAGACAGGGGCAGTGTA 60.615 60.000 0.00 0.00 0.00 2.90
974 1084 1.915769 GAGGAGACAGGGGCAGTGT 60.916 63.158 0.00 0.00 0.00 3.55
1066 1176 0.302890 CGCACGGCATGATCTCTTTC 59.697 55.000 0.00 0.00 0.00 2.62
1070 1180 3.643978 GGCGCACGGCATGATCTC 61.644 66.667 10.83 0.00 46.16 2.75
1351 1464 2.057408 CCGCTGAGAGCTCCTCCTT 61.057 63.158 10.93 0.00 41.25 3.36
1402 1515 2.253758 CCTGTCAACCAGCACACCG 61.254 63.158 0.00 0.00 40.06 4.94
1405 1518 1.227943 GCTCCTGTCAACCAGCACA 60.228 57.895 0.00 0.00 40.06 4.57
1407 1520 2.431683 GGCTCCTGTCAACCAGCA 59.568 61.111 0.00 0.00 40.06 4.41
1593 1706 1.114722 CCAGGAAAGGGCAGCAACAA 61.115 55.000 0.00 0.00 0.00 2.83
1596 1709 1.075482 CTCCAGGAAAGGGCAGCAA 59.925 57.895 0.00 0.00 0.00 3.91
1715 1832 3.344515 GAAAGCTGACCTAAACGGGATT 58.655 45.455 0.00 0.00 36.97 3.01
1864 1984 5.635700 GGGTCATCTATCTATTTCAGAACGC 59.364 44.000 0.00 0.00 36.67 4.84
1870 1990 6.479972 ACGTTGGGTCATCTATCTATTTCA 57.520 37.500 0.00 0.00 0.00 2.69
1874 1994 5.871396 ACAACGTTGGGTCATCTATCTAT 57.129 39.130 30.34 2.88 0.00 1.98
1877 1997 5.007385 AGTACAACGTTGGGTCATCTATC 57.993 43.478 30.34 8.26 0.00 2.08
1878 1998 6.154021 AGTTAGTACAACGTTGGGTCATCTAT 59.846 38.462 30.34 10.06 0.00 1.98
1879 1999 5.477984 AGTTAGTACAACGTTGGGTCATCTA 59.522 40.000 30.34 18.30 0.00 1.98
1880 2000 4.282703 AGTTAGTACAACGTTGGGTCATCT 59.717 41.667 30.34 18.14 0.00 2.90
1881 2001 4.563061 AGTTAGTACAACGTTGGGTCATC 58.437 43.478 30.34 16.42 0.00 2.92
1882 2002 4.612264 AGTTAGTACAACGTTGGGTCAT 57.388 40.909 30.34 12.93 0.00 3.06
1883 2003 4.405116 AAGTTAGTACAACGTTGGGTCA 57.595 40.909 30.34 11.47 0.00 4.02
1884 2004 4.571984 ACAAAGTTAGTACAACGTTGGGTC 59.428 41.667 30.34 19.28 41.61 4.46
1885 2005 4.516323 ACAAAGTTAGTACAACGTTGGGT 58.484 39.130 30.34 17.04 41.61 4.51
1886 2006 5.754890 AGTACAAAGTTAGTACAACGTTGGG 59.245 40.000 30.34 8.68 43.24 4.12
1887 2007 6.833342 AGTACAAAGTTAGTACAACGTTGG 57.167 37.500 30.34 13.78 43.24 3.77
1888 2008 9.839589 CTTTAGTACAAAGTTAGTACAACGTTG 57.160 33.333 26.20 26.20 43.24 4.10
1889 2009 9.586435 ACTTTAGTACAAAGTTAGTACAACGTT 57.414 29.630 14.04 0.00 43.24 3.99
1890 2010 9.586435 AACTTTAGTACAAAGTTAGTACAACGT 57.414 29.630 23.13 0.00 45.51 3.99
1920 2040 8.458843 CGTTCCAAAATAGATGACCAACTTTAT 58.541 33.333 0.00 0.00 0.00 1.40
1921 2041 7.094549 CCGTTCCAAAATAGATGACCAACTTTA 60.095 37.037 0.00 0.00 0.00 1.85
1922 2042 6.294508 CCGTTCCAAAATAGATGACCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
1923 2043 5.183140 CCGTTCCAAAATAGATGACCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
1924 2044 4.700213 CCGTTCCAAAATAGATGACCAACT 59.300 41.667 0.00 0.00 0.00 3.16
1925 2045 4.698304 TCCGTTCCAAAATAGATGACCAAC 59.302 41.667 0.00 0.00 0.00 3.77
1926 2046 4.912586 TCCGTTCCAAAATAGATGACCAA 58.087 39.130 0.00 0.00 0.00 3.67
1927 2047 4.224147 TCTCCGTTCCAAAATAGATGACCA 59.776 41.667 0.00 0.00 0.00 4.02
1928 2048 4.766375 TCTCCGTTCCAAAATAGATGACC 58.234 43.478 0.00 0.00 0.00 4.02
1929 2049 5.661458 TCTCTCCGTTCCAAAATAGATGAC 58.339 41.667 0.00 0.00 0.00 3.06
1930 2050 5.422331 ACTCTCTCCGTTCCAAAATAGATGA 59.578 40.000 0.00 0.00 0.00 2.92
1931 2051 5.665459 ACTCTCTCCGTTCCAAAATAGATG 58.335 41.667 0.00 0.00 0.00 2.90
1932 2052 5.941555 ACTCTCTCCGTTCCAAAATAGAT 57.058 39.130 0.00 0.00 0.00 1.98
1933 2053 5.163540 GCTACTCTCTCCGTTCCAAAATAGA 60.164 44.000 0.00 0.00 0.00 1.98
1934 2054 5.044558 GCTACTCTCTCCGTTCCAAAATAG 58.955 45.833 0.00 0.00 0.00 1.73
1935 2055 4.464951 TGCTACTCTCTCCGTTCCAAAATA 59.535 41.667 0.00 0.00 0.00 1.40
1936 2056 3.260884 TGCTACTCTCTCCGTTCCAAAAT 59.739 43.478 0.00 0.00 0.00 1.82
1937 2057 2.631062 TGCTACTCTCTCCGTTCCAAAA 59.369 45.455 0.00 0.00 0.00 2.44
1938 2058 2.231478 CTGCTACTCTCTCCGTTCCAAA 59.769 50.000 0.00 0.00 0.00 3.28
1939 2059 1.819288 CTGCTACTCTCTCCGTTCCAA 59.181 52.381 0.00 0.00 0.00 3.53
1940 2060 1.004394 TCTGCTACTCTCTCCGTTCCA 59.996 52.381 0.00 0.00 0.00 3.53
1941 2061 1.752683 TCTGCTACTCTCTCCGTTCC 58.247 55.000 0.00 0.00 0.00 3.62
1942 2062 4.555906 GCTTATCTGCTACTCTCTCCGTTC 60.556 50.000 0.00 0.00 0.00 3.95
1943 2063 3.316868 GCTTATCTGCTACTCTCTCCGTT 59.683 47.826 0.00 0.00 0.00 4.44
1944 2064 2.882137 GCTTATCTGCTACTCTCTCCGT 59.118 50.000 0.00 0.00 0.00 4.69
1945 2065 3.146066 AGCTTATCTGCTACTCTCTCCG 58.854 50.000 0.00 0.00 42.10 4.63
1946 2066 4.022329 GGAAGCTTATCTGCTACTCTCTCC 60.022 50.000 0.00 0.00 43.24 3.71
1947 2067 4.827284 AGGAAGCTTATCTGCTACTCTCTC 59.173 45.833 0.00 0.00 43.24 3.20
1948 2068 4.803452 AGGAAGCTTATCTGCTACTCTCT 58.197 43.478 0.00 0.00 43.24 3.10
1949 2069 6.001460 TCTAGGAAGCTTATCTGCTACTCTC 58.999 44.000 0.00 0.00 43.24 3.20
1950 2070 5.768164 GTCTAGGAAGCTTATCTGCTACTCT 59.232 44.000 0.00 0.00 43.24 3.24
1965 2085 7.382110 TCAACTCAATTCAAGAGTCTAGGAAG 58.618 38.462 11.48 2.87 45.11 3.46
1969 2089 6.817641 AGCATCAACTCAATTCAAGAGTCTAG 59.182 38.462 0.00 0.00 45.11 2.43
1971 2091 5.558818 AGCATCAACTCAATTCAAGAGTCT 58.441 37.500 0.00 0.00 45.11 3.24
1972 2092 5.642919 AGAGCATCAACTCAATTCAAGAGTC 59.357 40.000 0.00 0.00 45.11 3.36
2031 4055 4.822350 TCGTTCTAGTCTCTATCACATGGG 59.178 45.833 0.00 0.00 0.00 4.00
2041 4065 4.857679 AGGGTACATTCGTTCTAGTCTCT 58.142 43.478 0.00 0.00 0.00 3.10
2057 4081 2.742589 GAGTTGCAGCAGTAAAGGGTAC 59.257 50.000 2.55 0.00 0.00 3.34
2118 4144 7.394359 ACCAATCATGCTTGTTCAGTAAAGTAT 59.606 33.333 8.38 0.00 0.00 2.12
2165 5557 1.229145 ACTCACCTCTCTGCTGGCT 60.229 57.895 0.00 0.00 0.00 4.75
2172 5564 1.304547 CCGTGGGACTCACCTCTCT 60.305 63.158 0.00 0.00 43.23 3.10
2228 5620 4.038642 AGCAATGAAGGCTTTCCGTAAAAA 59.961 37.500 6.06 0.00 38.81 1.94
2229 5621 3.572255 AGCAATGAAGGCTTTCCGTAAAA 59.428 39.130 6.06 0.00 38.81 1.52
2230 5622 3.153919 AGCAATGAAGGCTTTCCGTAAA 58.846 40.909 6.06 0.00 38.81 2.01
2231 5623 2.790433 AGCAATGAAGGCTTTCCGTAA 58.210 42.857 6.06 0.00 38.81 3.18
2232 5624 2.489938 AGCAATGAAGGCTTTCCGTA 57.510 45.000 6.06 0.00 38.81 4.02
2233 5625 2.359900 CTAGCAATGAAGGCTTTCCGT 58.640 47.619 6.06 0.00 42.62 4.69
2234 5626 1.064654 GCTAGCAATGAAGGCTTTCCG 59.935 52.381 10.63 0.00 42.62 4.30
2235 5627 2.373224 AGCTAGCAATGAAGGCTTTCC 58.627 47.619 18.83 0.00 42.62 3.13
2236 5628 4.446994 AAAGCTAGCAATGAAGGCTTTC 57.553 40.909 18.83 0.77 46.00 2.62
2238 5630 7.340487 AGTTAATAAAGCTAGCAATGAAGGCTT 59.660 33.333 18.83 0.00 43.75 4.35
2239 5631 6.830838 AGTTAATAAAGCTAGCAATGAAGGCT 59.169 34.615 18.83 3.82 45.18 4.58
2240 5632 7.032377 AGTTAATAAAGCTAGCAATGAAGGC 57.968 36.000 18.83 1.39 0.00 4.35
2241 5633 7.852945 CGAAGTTAATAAAGCTAGCAATGAAGG 59.147 37.037 18.83 0.00 0.00 3.46
2242 5634 8.604035 TCGAAGTTAATAAAGCTAGCAATGAAG 58.396 33.333 18.83 0.00 0.00 3.02
2243 5635 8.487313 TCGAAGTTAATAAAGCTAGCAATGAA 57.513 30.769 18.83 4.05 0.00 2.57
2244 5636 8.487313 TTCGAAGTTAATAAAGCTAGCAATGA 57.513 30.769 18.83 0.00 0.00 2.57
2261 5653 9.234384 CAGTCGATGTAAGTATTATTCGAAGTT 57.766 33.333 3.35 0.00 44.09 2.66
2262 5654 7.378995 GCAGTCGATGTAAGTATTATTCGAAGT 59.621 37.037 3.35 0.00 44.09 3.01
2263 5655 7.591795 AGCAGTCGATGTAAGTATTATTCGAAG 59.408 37.037 3.35 6.63 44.09 3.79
2264 5656 7.423199 AGCAGTCGATGTAAGTATTATTCGAA 58.577 34.615 0.00 0.00 44.09 3.71
2265 5657 6.967135 AGCAGTCGATGTAAGTATTATTCGA 58.033 36.000 0.00 0.00 42.05 3.71
2266 5658 8.723777 TTAGCAGTCGATGTAAGTATTATTCG 57.276 34.615 0.00 0.00 39.12 3.34
2274 5666 9.821662 GTTAAATTTTTAGCAGTCGATGTAAGT 57.178 29.630 0.00 0.00 0.00 2.24
2275 5667 9.820229 TGTTAAATTTTTAGCAGTCGATGTAAG 57.180 29.630 0.00 0.00 31.59 2.34
2278 5670 9.128107 CATTGTTAAATTTTTAGCAGTCGATGT 57.872 29.630 0.00 0.00 35.72 3.06
2279 5671 9.340695 TCATTGTTAAATTTTTAGCAGTCGATG 57.659 29.630 0.00 2.86 35.72 3.84
2280 5672 9.559958 CTCATTGTTAAATTTTTAGCAGTCGAT 57.440 29.630 0.00 0.00 35.72 3.59
2281 5673 8.779303 TCTCATTGTTAAATTTTTAGCAGTCGA 58.221 29.630 0.00 0.00 35.72 4.20
2282 5674 8.948853 TCTCATTGTTAAATTTTTAGCAGTCG 57.051 30.769 0.00 0.00 35.72 4.18
2290 5682 9.463443 CTCGGAGTTTCTCATTGTTAAATTTTT 57.537 29.630 0.00 0.00 31.08 1.94
2291 5683 8.082242 CCTCGGAGTTTCTCATTGTTAAATTTT 58.918 33.333 4.02 0.00 31.08 1.82
2292 5684 7.230712 ACCTCGGAGTTTCTCATTGTTAAATTT 59.769 33.333 4.02 0.00 31.08 1.82
2293 5685 6.715264 ACCTCGGAGTTTCTCATTGTTAAATT 59.285 34.615 4.02 0.00 31.08 1.82
2294 5686 6.238648 ACCTCGGAGTTTCTCATTGTTAAAT 58.761 36.000 4.02 0.00 31.08 1.40
2295 5687 5.617252 ACCTCGGAGTTTCTCATTGTTAAA 58.383 37.500 4.02 0.00 31.08 1.52
2296 5688 5.223449 ACCTCGGAGTTTCTCATTGTTAA 57.777 39.130 4.02 0.00 31.08 2.01
2297 5689 4.884668 ACCTCGGAGTTTCTCATTGTTA 57.115 40.909 4.02 0.00 31.08 2.41
2298 5690 3.771577 ACCTCGGAGTTTCTCATTGTT 57.228 42.857 4.02 0.00 31.08 2.83
2299 5691 3.367087 CGTACCTCGGAGTTTCTCATTGT 60.367 47.826 4.02 0.00 35.71 2.71
2300 5692 3.179830 CGTACCTCGGAGTTTCTCATTG 58.820 50.000 4.02 0.00 35.71 2.82
2301 5693 2.824341 ACGTACCTCGGAGTTTCTCATT 59.176 45.455 4.02 0.00 44.69 2.57
2302 5694 2.422832 GACGTACCTCGGAGTTTCTCAT 59.577 50.000 4.02 0.00 44.69 2.90
2303 5695 1.808945 GACGTACCTCGGAGTTTCTCA 59.191 52.381 4.02 0.00 44.69 3.27
2304 5696 1.132073 GGACGTACCTCGGAGTTTCTC 59.868 57.143 4.02 0.00 44.69 2.87
2305 5697 1.172175 GGACGTACCTCGGAGTTTCT 58.828 55.000 4.02 0.00 44.69 2.52
2306 5698 0.883833 TGGACGTACCTCGGAGTTTC 59.116 55.000 4.02 0.00 44.69 2.78
2307 5699 1.475682 GATGGACGTACCTCGGAGTTT 59.524 52.381 4.02 0.00 44.69 2.66
2308 5700 1.101331 GATGGACGTACCTCGGAGTT 58.899 55.000 4.02 0.00 44.69 3.01
2309 5701 0.750911 GGATGGACGTACCTCGGAGT 60.751 60.000 4.02 0.00 44.69 3.85
2310 5702 0.750546 TGGATGGACGTACCTCGGAG 60.751 60.000 0.00 0.00 44.69 4.63
2311 5703 1.033746 GTGGATGGACGTACCTCGGA 61.034 60.000 0.00 0.00 44.69 4.55
2312 5704 1.317431 TGTGGATGGACGTACCTCGG 61.317 60.000 0.00 0.00 44.69 4.63
2313 5705 0.179145 GTGTGGATGGACGTACCTCG 60.179 60.000 0.00 0.00 46.00 4.63
2314 5706 0.892755 TGTGTGGATGGACGTACCTC 59.107 55.000 0.00 0.00 39.86 3.85
2315 5707 0.895530 CTGTGTGGATGGACGTACCT 59.104 55.000 0.00 0.00 39.86 3.08
2316 5708 0.606604 ACTGTGTGGATGGACGTACC 59.393 55.000 0.00 0.00 39.54 3.34
2317 5709 1.731424 CGACTGTGTGGATGGACGTAC 60.731 57.143 0.00 0.00 0.00 3.67
2318 5710 0.524414 CGACTGTGTGGATGGACGTA 59.476 55.000 0.00 0.00 0.00 3.57
2319 5711 1.289066 CGACTGTGTGGATGGACGT 59.711 57.895 0.00 0.00 0.00 4.34
2320 5712 1.446099 CCGACTGTGTGGATGGACG 60.446 63.158 0.00 0.00 0.00 4.79
2321 5713 0.537188 ATCCGACTGTGTGGATGGAC 59.463 55.000 9.67 0.00 43.30 4.02
2322 5714 1.066215 CAATCCGACTGTGTGGATGGA 60.066 52.381 10.88 0.00 44.16 3.41
2323 5715 1.339055 ACAATCCGACTGTGTGGATGG 60.339 52.381 10.88 10.52 44.16 3.51
2324 5716 2.099141 ACAATCCGACTGTGTGGATG 57.901 50.000 10.88 8.39 44.16 3.51
2325 5717 2.699954 GAACAATCCGACTGTGTGGAT 58.300 47.619 5.55 5.55 46.89 3.41
2326 5718 1.604438 CGAACAATCCGACTGTGTGGA 60.604 52.381 1.27 1.27 38.95 4.02
2327 5719 0.790207 CGAACAATCCGACTGTGTGG 59.210 55.000 0.00 0.00 0.00 4.17
2328 5720 1.497991 ACGAACAATCCGACTGTGTG 58.502 50.000 0.00 0.00 0.00 3.82
2329 5721 2.669364 GTACGAACAATCCGACTGTGT 58.331 47.619 0.00 0.00 0.00 3.72
2330 5722 1.647213 CGTACGAACAATCCGACTGTG 59.353 52.381 10.44 0.00 0.00 3.66
2331 5723 1.973138 CGTACGAACAATCCGACTGT 58.027 50.000 10.44 0.00 0.00 3.55
2332 5724 0.638746 GCGTACGAACAATCCGACTG 59.361 55.000 21.65 0.00 0.00 3.51
2333 5725 0.457337 GGCGTACGAACAATCCGACT 60.457 55.000 21.65 0.00 0.00 4.18
2334 5726 1.416050 GGGCGTACGAACAATCCGAC 61.416 60.000 21.65 0.00 0.00 4.79
2335 5727 1.153784 GGGCGTACGAACAATCCGA 60.154 57.895 21.65 0.00 0.00 4.55
2336 5728 2.169146 GGGGCGTACGAACAATCCG 61.169 63.158 21.65 0.00 0.00 4.18
2337 5729 0.463116 ATGGGGCGTACGAACAATCC 60.463 55.000 21.65 9.23 0.00 3.01
2338 5730 1.375551 AATGGGGCGTACGAACAATC 58.624 50.000 21.65 0.00 0.00 2.67
2339 5731 1.828979 AAATGGGGCGTACGAACAAT 58.171 45.000 21.65 6.57 0.00 2.71
2340 5732 2.348660 CTAAATGGGGCGTACGAACAA 58.651 47.619 21.65 4.08 0.00 2.83
2341 5733 2.008045 GCTAAATGGGGCGTACGAACA 61.008 52.381 21.65 14.17 0.00 3.18
2342 5734 0.654160 GCTAAATGGGGCGTACGAAC 59.346 55.000 21.65 10.78 0.00 3.95
2343 5735 0.538118 AGCTAAATGGGGCGTACGAA 59.462 50.000 21.65 0.69 0.00 3.85
2344 5736 1.338973 CTAGCTAAATGGGGCGTACGA 59.661 52.381 21.65 0.00 0.00 3.43
2345 5737 1.779569 CTAGCTAAATGGGGCGTACG 58.220 55.000 11.84 11.84 0.00 3.67
2346 5738 1.070289 AGCTAGCTAAATGGGGCGTAC 59.930 52.381 17.69 0.00 0.00 3.67
2347 5739 1.343465 GAGCTAGCTAAATGGGGCGTA 59.657 52.381 19.38 0.00 0.00 4.42
2348 5740 0.106894 GAGCTAGCTAAATGGGGCGT 59.893 55.000 19.38 0.00 0.00 5.68
2349 5741 0.106708 TGAGCTAGCTAAATGGGGCG 59.893 55.000 19.38 0.00 0.00 6.13
2350 5742 2.157738 CATGAGCTAGCTAAATGGGGC 58.842 52.381 19.38 2.75 0.00 5.80
2351 5743 3.672808 CTCATGAGCTAGCTAAATGGGG 58.327 50.000 27.45 20.14 0.00 4.96
2365 5757 6.757237 AGTAATAGAATCAGTGGCTCATGAG 58.243 40.000 18.84 18.84 0.00 2.90
2366 5758 6.737720 AGTAATAGAATCAGTGGCTCATGA 57.262 37.500 0.00 0.00 0.00 3.07
2367 5759 7.064371 GCATAGTAATAGAATCAGTGGCTCATG 59.936 40.741 0.00 0.00 0.00 3.07
2368 5760 7.038445 AGCATAGTAATAGAATCAGTGGCTCAT 60.038 37.037 0.00 0.00 0.00 2.90
2369 5761 6.268617 AGCATAGTAATAGAATCAGTGGCTCA 59.731 38.462 0.00 0.00 0.00 4.26
2370 5762 6.696411 AGCATAGTAATAGAATCAGTGGCTC 58.304 40.000 0.00 0.00 0.00 4.70
2371 5763 6.268617 TGAGCATAGTAATAGAATCAGTGGCT 59.731 38.462 0.00 0.00 0.00 4.75
2372 5764 6.459066 TGAGCATAGTAATAGAATCAGTGGC 58.541 40.000 0.00 0.00 0.00 5.01
2386 5778 6.015688 CGGGAAGGTTACTATTGAGCATAGTA 60.016 42.308 0.00 0.00 45.56 1.82
2388 5780 5.010719 TCGGGAAGGTTACTATTGAGCATAG 59.989 44.000 0.00 0.00 40.93 2.23
2389 5781 4.897076 TCGGGAAGGTTACTATTGAGCATA 59.103 41.667 0.00 0.00 0.00 3.14
2390 5782 3.709653 TCGGGAAGGTTACTATTGAGCAT 59.290 43.478 0.00 0.00 0.00 3.79
2391 5783 3.101437 TCGGGAAGGTTACTATTGAGCA 58.899 45.455 0.00 0.00 0.00 4.26
2392 5784 3.132467 AGTCGGGAAGGTTACTATTGAGC 59.868 47.826 0.00 0.00 0.00 4.26
2393 5785 5.105473 TGAAGTCGGGAAGGTTACTATTGAG 60.105 44.000 0.00 0.00 0.00 3.02
2394 5786 4.773674 TGAAGTCGGGAAGGTTACTATTGA 59.226 41.667 0.00 0.00 0.00 2.57
2395 5787 4.868734 GTGAAGTCGGGAAGGTTACTATTG 59.131 45.833 0.00 0.00 0.00 1.90
2396 5788 4.381292 CGTGAAGTCGGGAAGGTTACTATT 60.381 45.833 0.00 0.00 0.00 1.73
2397 5789 3.129988 CGTGAAGTCGGGAAGGTTACTAT 59.870 47.826 0.00 0.00 0.00 2.12
2398 5790 2.489329 CGTGAAGTCGGGAAGGTTACTA 59.511 50.000 0.00 0.00 0.00 1.82
2399 5791 1.271656 CGTGAAGTCGGGAAGGTTACT 59.728 52.381 0.00 0.00 0.00 2.24
2400 5792 1.706443 CGTGAAGTCGGGAAGGTTAC 58.294 55.000 0.00 0.00 0.00 2.50
2401 5793 0.037975 GCGTGAAGTCGGGAAGGTTA 60.038 55.000 0.00 0.00 0.00 2.85
2402 5794 1.301479 GCGTGAAGTCGGGAAGGTT 60.301 57.895 0.00 0.00 0.00 3.50
2403 5795 2.035237 TTGCGTGAAGTCGGGAAGGT 62.035 55.000 0.00 0.00 0.00 3.50
2404 5796 0.673644 ATTGCGTGAAGTCGGGAAGG 60.674 55.000 0.00 0.00 0.00 3.46
2405 5797 2.004583 TATTGCGTGAAGTCGGGAAG 57.995 50.000 0.00 0.00 0.00 3.46
2406 5798 2.070783 GTTATTGCGTGAAGTCGGGAA 58.929 47.619 0.00 0.00 0.00 3.97
2407 5799 1.274167 AGTTATTGCGTGAAGTCGGGA 59.726 47.619 0.00 0.00 0.00 5.14
2408 5800 1.659098 GAGTTATTGCGTGAAGTCGGG 59.341 52.381 0.00 0.00 0.00 5.14
2409 5801 2.607187 AGAGTTATTGCGTGAAGTCGG 58.393 47.619 0.00 0.00 31.50 4.79
2410 5802 4.317418 GCATAGAGTTATTGCGTGAAGTCG 60.317 45.833 0.00 0.00 31.50 4.18
2411 5803 4.566759 TGCATAGAGTTATTGCGTGAAGTC 59.433 41.667 0.00 0.00 0.00 3.01
2412 5804 4.503910 TGCATAGAGTTATTGCGTGAAGT 58.496 39.130 0.00 0.00 0.00 3.01
2413 5805 5.469373 TTGCATAGAGTTATTGCGTGAAG 57.531 39.130 0.00 0.00 0.00 3.02
2414 5806 5.584251 TGATTGCATAGAGTTATTGCGTGAA 59.416 36.000 0.00 0.00 0.00 3.18
2415 5807 5.115480 TGATTGCATAGAGTTATTGCGTGA 58.885 37.500 0.00 0.00 0.00 4.35
2416 5808 5.408204 TGATTGCATAGAGTTATTGCGTG 57.592 39.130 0.00 0.00 0.00 5.34
2417 5809 5.994054 AGATGATTGCATAGAGTTATTGCGT 59.006 36.000 0.00 0.00 34.11 5.24
2418 5810 6.477669 AGATGATTGCATAGAGTTATTGCG 57.522 37.500 0.00 0.00 34.11 4.85
2419 5811 8.545229 ACTAGATGATTGCATAGAGTTATTGC 57.455 34.615 0.00 0.00 34.11 3.56
2424 5816 8.874156 TCCAATACTAGATGATTGCATAGAGTT 58.126 33.333 0.00 0.00 34.11 3.01
2425 5817 8.427902 TCCAATACTAGATGATTGCATAGAGT 57.572 34.615 0.00 0.00 34.11 3.24
2426 5818 7.492020 GCTCCAATACTAGATGATTGCATAGAG 59.508 40.741 0.00 6.58 34.11 2.43
2427 5819 7.179872 AGCTCCAATACTAGATGATTGCATAGA 59.820 37.037 0.00 0.00 34.11 1.98
2428 5820 7.278203 CAGCTCCAATACTAGATGATTGCATAG 59.722 40.741 0.00 3.18 34.11 2.23
2429 5821 7.101700 CAGCTCCAATACTAGATGATTGCATA 58.898 38.462 0.00 0.00 34.11 3.14
2430 5822 5.938710 CAGCTCCAATACTAGATGATTGCAT 59.061 40.000 0.00 0.00 37.47 3.96
2431 5823 5.303165 CAGCTCCAATACTAGATGATTGCA 58.697 41.667 0.00 0.00 30.72 4.08
2432 5824 4.153835 GCAGCTCCAATACTAGATGATTGC 59.846 45.833 0.00 0.00 30.72 3.56
2433 5825 4.388165 CGCAGCTCCAATACTAGATGATTG 59.612 45.833 0.00 3.45 30.72 2.67
2434 5826 4.281941 TCGCAGCTCCAATACTAGATGATT 59.718 41.667 0.00 0.00 30.72 2.57
2435 5827 3.829026 TCGCAGCTCCAATACTAGATGAT 59.171 43.478 0.00 0.00 30.72 2.45
2436 5828 3.004839 GTCGCAGCTCCAATACTAGATGA 59.995 47.826 0.00 0.00 30.72 2.92
2437 5829 3.312828 GTCGCAGCTCCAATACTAGATG 58.687 50.000 0.00 0.00 32.34 2.90
2438 5830 2.297597 GGTCGCAGCTCCAATACTAGAT 59.702 50.000 0.00 0.00 0.00 1.98
2439 5831 1.681793 GGTCGCAGCTCCAATACTAGA 59.318 52.381 0.00 0.00 0.00 2.43
2440 5832 1.409064 TGGTCGCAGCTCCAATACTAG 59.591 52.381 4.03 0.00 0.00 2.57
2441 5833 1.480789 TGGTCGCAGCTCCAATACTA 58.519 50.000 4.03 0.00 0.00 1.82
2442 5834 0.833287 ATGGTCGCAGCTCCAATACT 59.167 50.000 9.70 0.00 35.35 2.12
2443 5835 2.035961 TCTATGGTCGCAGCTCCAATAC 59.964 50.000 9.70 0.00 35.35 1.89
2444 5836 2.316108 TCTATGGTCGCAGCTCCAATA 58.684 47.619 9.70 4.02 35.35 1.90
2445 5837 1.123077 TCTATGGTCGCAGCTCCAAT 58.877 50.000 9.70 3.24 35.35 3.16
2446 5838 0.901827 TTCTATGGTCGCAGCTCCAA 59.098 50.000 9.70 1.17 35.35 3.53
2447 5839 1.069204 GATTCTATGGTCGCAGCTCCA 59.931 52.381 8.34 8.34 36.01 3.86
2448 5840 1.342819 AGATTCTATGGTCGCAGCTCC 59.657 52.381 0.00 0.00 0.00 4.70
2449 5841 2.295909 AGAGATTCTATGGTCGCAGCTC 59.704 50.000 0.00 0.00 0.00 4.09
2450 5842 2.295909 GAGAGATTCTATGGTCGCAGCT 59.704 50.000 0.00 0.00 0.00 4.24
2451 5843 2.035193 TGAGAGATTCTATGGTCGCAGC 59.965 50.000 0.00 0.00 0.00 5.25
2452 5844 3.998099 TGAGAGATTCTATGGTCGCAG 57.002 47.619 0.00 0.00 0.00 5.18
2453 5845 3.891366 TCATGAGAGATTCTATGGTCGCA 59.109 43.478 0.00 0.00 0.00 5.10
2454 5846 4.484236 CTCATGAGAGATTCTATGGTCGC 58.516 47.826 18.34 0.00 44.98 5.19
2455 5847 4.484236 GCTCATGAGAGATTCTATGGTCG 58.516 47.826 27.04 0.00 44.98 4.79
2456 5848 4.282957 TGGCTCATGAGAGATTCTATGGTC 59.717 45.833 27.04 3.34 44.98 4.02
2457 5849 4.040217 GTGGCTCATGAGAGATTCTATGGT 59.960 45.833 27.04 0.00 44.98 3.55
2458 5850 4.283978 AGTGGCTCATGAGAGATTCTATGG 59.716 45.833 27.04 0.00 44.98 2.74
2459 5851 5.471556 AGTGGCTCATGAGAGATTCTATG 57.528 43.478 27.04 0.00 44.98 2.23
2460 5852 6.073981 TGTAGTGGCTCATGAGAGATTCTAT 58.926 40.000 27.04 5.56 44.98 1.98
2461 5853 5.449553 TGTAGTGGCTCATGAGAGATTCTA 58.550 41.667 27.04 15.60 44.98 2.10
2462 5854 4.285020 TGTAGTGGCTCATGAGAGATTCT 58.715 43.478 27.04 16.49 44.98 2.40
2463 5855 4.662468 TGTAGTGGCTCATGAGAGATTC 57.338 45.455 27.04 7.81 44.98 2.52
2464 5856 4.261952 CGATGTAGTGGCTCATGAGAGATT 60.262 45.833 27.04 10.34 44.98 2.40
2465 5857 3.255395 CGATGTAGTGGCTCATGAGAGAT 59.745 47.826 27.04 8.74 44.98 2.75
2466 5858 2.620585 CGATGTAGTGGCTCATGAGAGA 59.379 50.000 27.04 8.46 44.98 3.10
2467 5859 2.620585 TCGATGTAGTGGCTCATGAGAG 59.379 50.000 27.04 1.76 44.96 3.20
2468 5860 2.620585 CTCGATGTAGTGGCTCATGAGA 59.379 50.000 27.04 3.12 0.00 3.27
2469 5861 2.861750 GCTCGATGTAGTGGCTCATGAG 60.862 54.545 18.84 18.84 0.00 2.90
2470 5862 1.067669 GCTCGATGTAGTGGCTCATGA 59.932 52.381 0.00 0.00 0.00 3.07
2471 5863 1.495878 GCTCGATGTAGTGGCTCATG 58.504 55.000 0.00 0.00 0.00 3.07
2472 5864 0.390860 GGCTCGATGTAGTGGCTCAT 59.609 55.000 0.00 0.00 0.00 2.90
2473 5865 1.676678 GGGCTCGATGTAGTGGCTCA 61.677 60.000 0.00 0.00 0.00 4.26
2474 5866 1.068250 GGGCTCGATGTAGTGGCTC 59.932 63.158 0.00 0.00 0.00 4.70
2475 5867 1.685765 TGGGCTCGATGTAGTGGCT 60.686 57.895 0.00 0.00 0.00 4.75
2476 5868 1.521681 GTGGGCTCGATGTAGTGGC 60.522 63.158 0.00 0.00 0.00 5.01
2477 5869 1.226974 CGTGGGCTCGATGTAGTGG 60.227 63.158 0.00 0.00 0.00 4.00
2478 5870 0.525668 GTCGTGGGCTCGATGTAGTG 60.526 60.000 8.27 0.00 41.78 2.74
2479 5871 1.664321 GGTCGTGGGCTCGATGTAGT 61.664 60.000 8.27 0.00 41.78 2.73
2480 5872 1.065928 GGTCGTGGGCTCGATGTAG 59.934 63.158 8.27 0.00 41.78 2.74
2481 5873 0.107066 TAGGTCGTGGGCTCGATGTA 60.107 55.000 8.27 2.26 41.78 2.29
2482 5874 1.379443 TAGGTCGTGGGCTCGATGT 60.379 57.895 8.27 3.02 41.78 3.06
2483 5875 1.101635 TCTAGGTCGTGGGCTCGATG 61.102 60.000 8.27 0.00 41.78 3.84
2484 5876 0.395311 TTCTAGGTCGTGGGCTCGAT 60.395 55.000 8.27 0.00 41.78 3.59
2485 5877 0.395311 ATTCTAGGTCGTGGGCTCGA 60.395 55.000 1.83 1.83 37.51 4.04
2486 5878 0.249073 CATTCTAGGTCGTGGGCTCG 60.249 60.000 0.00 0.00 0.00 5.03
2487 5879 0.824759 ACATTCTAGGTCGTGGGCTC 59.175 55.000 0.00 0.00 0.00 4.70
2488 5880 0.824759 GACATTCTAGGTCGTGGGCT 59.175 55.000 0.00 0.00 0.00 5.19
2489 5881 0.179081 GGACATTCTAGGTCGTGGGC 60.179 60.000 0.00 0.00 36.12 5.36
2490 5882 0.464452 GGGACATTCTAGGTCGTGGG 59.536 60.000 0.00 0.00 36.12 4.61
2491 5883 1.486211 AGGGACATTCTAGGTCGTGG 58.514 55.000 0.00 0.00 36.12 4.94
2492 5884 2.233922 ACAAGGGACATTCTAGGTCGTG 59.766 50.000 0.00 0.00 36.12 4.35
2493 5885 2.537143 ACAAGGGACATTCTAGGTCGT 58.463 47.619 0.00 0.00 36.12 4.34
2494 5886 3.611766 AACAAGGGACATTCTAGGTCG 57.388 47.619 0.00 0.00 36.12 4.79
2495 5887 6.107343 GTCTTAACAAGGGACATTCTAGGTC 58.893 44.000 0.00 0.00 34.52 3.85
2496 5888 5.546499 TGTCTTAACAAGGGACATTCTAGGT 59.454 40.000 0.00 0.00 35.44 3.08
2497 5889 6.049955 TGTCTTAACAAGGGACATTCTAGG 57.950 41.667 0.00 0.00 35.44 3.02
2498 5890 8.696374 TCTATGTCTTAACAAGGGACATTCTAG 58.304 37.037 11.25 5.22 44.93 2.43
2499 5891 8.603898 TCTATGTCTTAACAAGGGACATTCTA 57.396 34.615 11.25 0.00 44.93 2.10
2500 5892 7.400339 TCTCTATGTCTTAACAAGGGACATTCT 59.600 37.037 11.25 0.00 44.93 2.40
2501 5893 7.556844 TCTCTATGTCTTAACAAGGGACATTC 58.443 38.462 11.25 0.00 44.93 2.67
2502 5894 7.496346 TCTCTATGTCTTAACAAGGGACATT 57.504 36.000 11.25 0.00 44.93 2.71
2504 5896 6.928348 TTCTCTATGTCTTAACAAGGGACA 57.072 37.500 0.00 0.00 42.85 4.02
2505 5897 6.987404 GGATTCTCTATGTCTTAACAAGGGAC 59.013 42.308 0.00 0.00 39.30 4.46
2506 5898 6.672218 TGGATTCTCTATGTCTTAACAAGGGA 59.328 38.462 0.00 0.00 39.30 4.20
2507 5899 6.763610 GTGGATTCTCTATGTCTTAACAAGGG 59.236 42.308 0.00 0.00 39.30 3.95
2508 5900 6.763610 GGTGGATTCTCTATGTCTTAACAAGG 59.236 42.308 0.00 0.00 39.30 3.61
2509 5901 7.278868 GTGGTGGATTCTCTATGTCTTAACAAG 59.721 40.741 0.00 0.00 39.30 3.16
2510 5902 7.103641 GTGGTGGATTCTCTATGTCTTAACAA 58.896 38.462 0.00 0.00 39.30 2.83
2511 5903 6.212589 TGTGGTGGATTCTCTATGTCTTAACA 59.787 38.462 0.00 0.00 40.38 2.41
2512 5904 6.640518 TGTGGTGGATTCTCTATGTCTTAAC 58.359 40.000 0.00 0.00 0.00 2.01
2513 5905 6.867519 TGTGGTGGATTCTCTATGTCTTAA 57.132 37.500 0.00 0.00 0.00 1.85
2514 5906 6.867519 TTGTGGTGGATTCTCTATGTCTTA 57.132 37.500 0.00 0.00 0.00 2.10
2515 5907 5.762179 TTGTGGTGGATTCTCTATGTCTT 57.238 39.130 0.00 0.00 0.00 3.01
2516 5908 5.426509 TCATTGTGGTGGATTCTCTATGTCT 59.573 40.000 0.00 0.00 0.00 3.41
2517 5909 5.674525 TCATTGTGGTGGATTCTCTATGTC 58.325 41.667 0.00 0.00 0.00 3.06
2518 5910 5.698741 TCATTGTGGTGGATTCTCTATGT 57.301 39.130 0.00 0.00 0.00 2.29
2519 5911 8.727910 CAATATCATTGTGGTGGATTCTCTATG 58.272 37.037 0.00 0.00 0.00 2.23
2520 5912 8.443176 ACAATATCATTGTGGTGGATTCTCTAT 58.557 33.333 3.81 0.00 0.00 1.98
2521 5913 7.805163 ACAATATCATTGTGGTGGATTCTCTA 58.195 34.615 3.81 0.00 0.00 2.43
2522 5914 6.666678 ACAATATCATTGTGGTGGATTCTCT 58.333 36.000 3.81 0.00 0.00 3.10
2523 5915 6.016777 GGACAATATCATTGTGGTGGATTCTC 60.017 42.308 9.16 0.00 31.96 2.87
2524 5916 5.829924 GGACAATATCATTGTGGTGGATTCT 59.170 40.000 9.16 0.00 31.96 2.40
2525 5917 5.593909 TGGACAATATCATTGTGGTGGATTC 59.406 40.000 9.16 0.00 31.96 2.52
2526 5918 5.517924 TGGACAATATCATTGTGGTGGATT 58.482 37.500 9.16 0.00 31.96 3.01
2527 5919 5.128033 TGGACAATATCATTGTGGTGGAT 57.872 39.130 9.16 0.00 31.96 3.41
2528 5920 4.582973 TGGACAATATCATTGTGGTGGA 57.417 40.909 9.16 0.00 31.96 4.02
2529 5921 5.595542 AGAATGGACAATATCATTGTGGTGG 59.404 40.000 9.16 0.00 34.18 4.61
2530 5922 6.319405 TGAGAATGGACAATATCATTGTGGTG 59.681 38.462 9.16 0.00 34.18 4.17
2531 5923 6.319658 GTGAGAATGGACAATATCATTGTGGT 59.680 38.462 9.16 0.00 34.18 4.16
2532 5924 6.544931 AGTGAGAATGGACAATATCATTGTGG 59.455 38.462 9.16 0.00 34.18 4.17
2533 5925 7.563888 AGTGAGAATGGACAATATCATTGTG 57.436 36.000 9.16 0.00 34.18 3.33
2534 5926 7.443575 GCTAGTGAGAATGGACAATATCATTGT 59.556 37.037 4.26 4.26 34.18 2.71
2535 5927 7.443272 TGCTAGTGAGAATGGACAATATCATTG 59.557 37.037 0.00 0.00 34.18 2.82
2536 5928 7.443575 GTGCTAGTGAGAATGGACAATATCATT 59.556 37.037 0.00 0.00 36.43 2.57
2537 5929 6.933521 GTGCTAGTGAGAATGGACAATATCAT 59.066 38.462 0.00 0.00 0.00 2.45
2538 5930 6.127083 TGTGCTAGTGAGAATGGACAATATCA 60.127 38.462 0.00 0.00 0.00 2.15
2539 5931 6.283694 TGTGCTAGTGAGAATGGACAATATC 58.716 40.000 0.00 0.00 0.00 1.63
2540 5932 6.239217 TGTGCTAGTGAGAATGGACAATAT 57.761 37.500 0.00 0.00 0.00 1.28
2541 5933 5.675684 TGTGCTAGTGAGAATGGACAATA 57.324 39.130 0.00 0.00 0.00 1.90
2542 5934 4.558226 TGTGCTAGTGAGAATGGACAAT 57.442 40.909 0.00 0.00 0.00 2.71
2543 5935 4.558226 ATGTGCTAGTGAGAATGGACAA 57.442 40.909 0.00 0.00 34.70 3.18
2544 5936 4.256110 CAATGTGCTAGTGAGAATGGACA 58.744 43.478 0.00 0.00 35.43 4.02
2545 5937 4.256920 ACAATGTGCTAGTGAGAATGGAC 58.743 43.478 0.00 0.00 0.00 4.02
2546 5938 4.558226 ACAATGTGCTAGTGAGAATGGA 57.442 40.909 0.00 0.00 0.00 3.41
2547 5939 4.673580 GCAACAATGTGCTAGTGAGAATGG 60.674 45.833 0.00 0.00 41.51 3.16
2548 5940 4.083164 TGCAACAATGTGCTAGTGAGAATG 60.083 41.667 8.69 0.00 45.17 2.67
2549 5941 4.074259 TGCAACAATGTGCTAGTGAGAAT 58.926 39.130 8.69 0.00 45.17 2.40
2550 5942 3.475575 TGCAACAATGTGCTAGTGAGAA 58.524 40.909 8.69 0.00 45.17 2.87
2551 5943 3.124578 TGCAACAATGTGCTAGTGAGA 57.875 42.857 8.69 0.00 45.17 3.27
2552 5944 3.688185 AGATGCAACAATGTGCTAGTGAG 59.312 43.478 0.00 0.00 45.17 3.51
2553 5945 3.678289 AGATGCAACAATGTGCTAGTGA 58.322 40.909 0.00 0.00 45.17 3.41
2554 5946 5.448225 CCTTAGATGCAACAATGTGCTAGTG 60.448 44.000 0.00 0.00 45.17 2.74
2555 5947 4.637534 CCTTAGATGCAACAATGTGCTAGT 59.362 41.667 0.00 0.00 45.17 2.57
2556 5948 4.497006 GCCTTAGATGCAACAATGTGCTAG 60.497 45.833 0.00 0.00 45.17 3.42
2557 5949 3.378112 GCCTTAGATGCAACAATGTGCTA 59.622 43.478 0.00 0.00 45.17 3.49
2558 5950 2.165030 GCCTTAGATGCAACAATGTGCT 59.835 45.455 0.00 0.00 45.17 4.40
2559 5951 2.165030 AGCCTTAGATGCAACAATGTGC 59.835 45.455 0.00 0.00 45.15 4.57
2560 5952 4.445452 AAGCCTTAGATGCAACAATGTG 57.555 40.909 0.00 0.00 0.00 3.21
2561 5953 4.322198 CCAAAGCCTTAGATGCAACAATGT 60.322 41.667 0.00 0.00 0.00 2.71
2562 5954 4.082081 TCCAAAGCCTTAGATGCAACAATG 60.082 41.667 0.00 0.00 0.00 2.82
2563 5955 4.088634 TCCAAAGCCTTAGATGCAACAAT 58.911 39.130 0.00 0.00 0.00 2.71
2564 5956 3.495331 TCCAAAGCCTTAGATGCAACAA 58.505 40.909 0.00 0.00 0.00 2.83
2565 5957 3.153369 TCCAAAGCCTTAGATGCAACA 57.847 42.857 0.00 0.00 0.00 3.33
2566 5958 4.725790 AATCCAAAGCCTTAGATGCAAC 57.274 40.909 0.00 0.00 0.00 4.17
2567 5959 4.339247 GCTAATCCAAAGCCTTAGATGCAA 59.661 41.667 0.00 0.00 33.73 4.08
2568 5960 3.885297 GCTAATCCAAAGCCTTAGATGCA 59.115 43.478 0.00 0.00 33.73 3.96
2569 5961 4.140536 AGCTAATCCAAAGCCTTAGATGC 58.859 43.478 0.00 0.00 41.02 3.91
2570 5962 5.824624 TGAAGCTAATCCAAAGCCTTAGATG 59.175 40.000 0.00 0.00 41.02 2.90
2571 5963 6.006275 TGAAGCTAATCCAAAGCCTTAGAT 57.994 37.500 0.00 0.00 41.02 1.98
2572 5964 5.435686 TGAAGCTAATCCAAAGCCTTAGA 57.564 39.130 0.00 0.00 41.02 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.