Multiple sequence alignment - TraesCS2B01G245600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G245600 chr2B 100.000 8844 0 0 1 8844 249525729 249516886 0.000000e+00 16332.0
1 TraesCS2B01G245600 chr2B 80.159 378 42 17 1692 2041 361629801 361629429 1.470000e-62 252.0
2 TraesCS2B01G245600 chr2A 91.736 1815 80 23 4361 6137 207592678 207590896 0.000000e+00 2457.0
3 TraesCS2B01G245600 chr2A 93.716 1273 53 6 6956 8211 207589907 207588645 0.000000e+00 1882.0
4 TraesCS2B01G245600 chr2A 89.543 1358 98 25 1924 3276 207595102 207593784 0.000000e+00 1681.0
5 TraesCS2B01G245600 chr2A 94.800 1000 35 6 3278 4261 207593743 207592745 0.000000e+00 1543.0
6 TraesCS2B01G245600 chr2A 93.407 728 28 4 6224 6951 207590651 207589944 0.000000e+00 1061.0
7 TraesCS2B01G245600 chr2A 91.258 652 27 13 572 1207 207596060 207595423 0.000000e+00 861.0
8 TraesCS2B01G245600 chr2A 95.870 339 6 3 1223 1560 207595439 207595108 7.810000e-150 542.0
9 TraesCS2B01G245600 chr2A 82.135 459 61 16 21 464 207596702 207596250 3.010000e-99 374.0
10 TraesCS2B01G245600 chr2D 94.819 1274 49 7 6951 8210 193394826 193393556 0.000000e+00 1971.0
11 TraesCS2B01G245600 chr2D 92.151 1427 64 23 4375 5764 193397383 193395968 0.000000e+00 1971.0
12 TraesCS2B01G245600 chr2D 91.601 1143 60 17 5815 6951 193395970 193394858 0.000000e+00 1546.0
13 TraesCS2B01G245600 chr2D 92.535 643 38 7 3625 4264 193398861 193398226 0.000000e+00 913.0
14 TraesCS2B01G245600 chr2D 93.945 545 11 12 669 1207 193400924 193400396 0.000000e+00 804.0
15 TraesCS2B01G245600 chr2D 82.365 981 103 30 1722 2638 598725684 598726658 0.000000e+00 789.0
16 TraesCS2B01G245600 chr2D 91.932 471 27 5 1223 1689 193400412 193399949 0.000000e+00 649.0
17 TraesCS2B01G245600 chr2D 94.737 418 12 2 2861 3276 193399709 193399300 7.490000e-180 641.0
18 TraesCS2B01G245600 chr2D 90.074 403 19 6 3276 3660 193399261 193398862 3.690000e-138 503.0
19 TraesCS2B01G245600 chr2D 81.179 441 49 18 1695 2104 378379056 378378619 3.080000e-84 324.0
20 TraesCS2B01G245600 chr2D 82.500 360 61 2 180 538 193402576 193402218 1.850000e-81 315.0
21 TraesCS2B01G245600 chr2D 85.811 296 34 6 2350 2642 247854768 247855058 3.100000e-79 307.0
22 TraesCS2B01G245600 chr2D 79.149 470 76 17 2151 2611 344336023 344335567 1.120000e-78 305.0
23 TraesCS2B01G245600 chr2D 88.587 184 16 3 2670 2849 193399953 193399771 1.490000e-52 219.0
24 TraesCS2B01G245600 chr2D 92.784 97 7 0 4232 4328 74149828 74149732 3.330000e-29 141.0
25 TraesCS2B01G245600 chr6D 81.548 1008 119 33 1695 2643 456016116 456015117 0.000000e+00 769.0
26 TraesCS2B01G245600 chr6D 80.926 907 99 30 1692 2543 27141345 27142232 0.000000e+00 649.0
27 TraesCS2B01G245600 chr6D 88.546 454 51 1 8392 8844 13675116 13674663 4.670000e-152 549.0
28 TraesCS2B01G245600 chr6D 79.463 857 96 33 1694 2479 8112842 8111995 1.310000e-147 534.0
29 TraesCS2B01G245600 chr6D 87.665 454 55 1 8392 8844 3826672 3827125 2.190000e-145 527.0
30 TraesCS2B01G245600 chr3A 80.952 1008 124 31 1695 2643 742226035 742225037 0.000000e+00 736.0
31 TraesCS2B01G245600 chr3A 82.370 692 95 19 1006 1684 356524560 356525237 2.140000e-160 577.0
32 TraesCS2B01G245600 chr3A 91.045 67 6 0 2685 2751 356525250 356525316 3.400000e-14 91.6
33 TraesCS2B01G245600 chr3A 96.875 32 0 1 2642 2672 29150072 29150041 1.600000e-02 52.8
34 TraesCS2B01G245600 chr4D 81.186 978 123 28 1702 2623 63106727 63105755 0.000000e+00 730.0
35 TraesCS2B01G245600 chr4D 80.999 921 115 34 1696 2561 382337192 382336277 0.000000e+00 676.0
36 TraesCS2B01G245600 chr4D 88.079 453 53 1 8392 8843 436907613 436908065 3.630000e-148 536.0
37 TraesCS2B01G245600 chr4D 80.519 616 85 21 1694 2281 497270832 497271440 2.930000e-119 440.0
38 TraesCS2B01G245600 chr7D 81.269 977 112 37 1692 2613 47111078 47112038 0.000000e+00 725.0
39 TraesCS2B01G245600 chr7D 82.946 645 76 17 1731 2348 218003762 218004399 1.300000e-152 551.0
40 TraesCS2B01G245600 chr7D 88.106 454 53 1 8392 8844 53315685 53316138 1.010000e-148 538.0
41 TraesCS2B01G245600 chr7D 87.885 454 51 3 8392 8844 1922688 1923138 1.690000e-146 531.0
42 TraesCS2B01G245600 chr7D 87.692 455 55 1 8391 8844 159715504 159715050 6.080000e-146 529.0
43 TraesCS2B01G245600 chr7D 81.336 434 48 19 1697 2101 427625302 427625731 1.110000e-83 322.0
44 TraesCS2B01G245600 chr7D 91.000 100 9 0 4229 4328 580850080 580850179 1.550000e-27 135.0
45 TraesCS2B01G245600 chr7D 90.909 66 4 2 8333 8396 53315587 53315652 4.400000e-13 87.9
46 TraesCS2B01G245600 chrUn 80.293 1025 117 52 1695 2643 101938223 101937208 0.000000e+00 695.0
47 TraesCS2B01G245600 chrUn 87.885 454 54 1 8392 8844 95815323 95815776 4.700000e-147 532.0
48 TraesCS2B01G245600 chrUn 93.220 59 3 1 8338 8396 95815233 95815290 1.580000e-12 86.1
49 TraesCS2B01G245600 chrUn 96.875 32 0 1 2642 2672 232344269 232344238 1.600000e-02 52.8
50 TraesCS2B01G245600 chrUn 100.000 28 0 0 2644 2671 371794421 371794394 1.600000e-02 52.8
51 TraesCS2B01G245600 chr3D 80.619 1001 106 41 1719 2637 586210660 586211654 0.000000e+00 693.0
52 TraesCS2B01G245600 chr3D 88.767 454 47 3 8392 8844 50061594 50061144 3.610000e-153 553.0
53 TraesCS2B01G245600 chr3D 87.885 454 53 2 8392 8844 345247588 345248040 4.700000e-147 532.0
54 TraesCS2B01G245600 chr3D 80.707 679 90 16 1692 2345 590806623 590807285 2.870000e-134 490.0
55 TraesCS2B01G245600 chr3D 84.555 382 43 11 1313 1684 199201151 199201526 1.810000e-96 364.0
56 TraesCS2B01G245600 chr3D 85.965 171 17 4 2685 2850 199201539 199201707 9.130000e-40 176.0
57 TraesCS2B01G245600 chr5D 80.341 997 116 51 1702 2643 486536721 486535750 0.000000e+00 682.0
58 TraesCS2B01G245600 chr5D 82.997 694 93 17 1006 1687 98749216 98748536 9.820000e-169 604.0
59 TraesCS2B01G245600 chr5D 85.965 171 17 4 2685 2850 98748526 98748358 9.130000e-40 176.0
60 TraesCS2B01G245600 chr5D 87.611 113 12 2 4224 4334 354943581 354943693 7.210000e-26 130.0
61 TraesCS2B01G245600 chr7A 79.497 995 142 29 1695 2637 54733979 54732995 0.000000e+00 651.0
62 TraesCS2B01G245600 chr7A 79.581 764 100 24 1930 2643 341435981 341436738 6.170000e-136 496.0
63 TraesCS2B01G245600 chr7A 85.135 74 9 2 8331 8403 657861226 657861298 3.420000e-09 75.0
64 TraesCS2B01G245600 chr6B 83.569 706 80 20 997 1688 109138427 109137744 5.830000e-176 628.0
65 TraesCS2B01G245600 chr6B 82.910 591 80 15 1105 1684 512881553 512882133 6.120000e-141 512.0
66 TraesCS2B01G245600 chr6B 85.380 171 18 4 2685 2850 512882146 512882314 4.250000e-38 171.0
67 TraesCS2B01G245600 chr1A 83.046 696 88 20 1006 1687 294140339 294139660 9.820000e-169 604.0
68 TraesCS2B01G245600 chr1A 89.623 106 10 1 4230 4334 293720535 293720640 5.570000e-27 134.0
69 TraesCS2B01G245600 chr6A 78.333 1020 137 52 1702 2643 99421201 99420188 4.600000e-162 582.0
70 TraesCS2B01G245600 chr6A 78.947 171 32 4 317 484 463518394 463518563 7.260000e-21 113.0
71 TraesCS2B01G245600 chr5B 84.083 578 72 14 1121 1687 489106881 489106313 2.810000e-149 540.0
72 TraesCS2B01G245600 chr5B 83.371 439 40 17 1695 2104 524539805 524539371 8.380000e-100 375.0
73 TraesCS2B01G245600 chr5B 81.755 433 45 19 1702 2104 354776519 354776091 1.840000e-86 331.0
74 TraesCS2B01G245600 chr5B 85.965 171 17 4 2685 2850 489106303 489106135 9.130000e-40 176.0
75 TraesCS2B01G245600 chr5B 91.176 102 9 0 4228 4329 378998871 378998972 1.200000e-28 139.0
76 TraesCS2B01G245600 chr5B 91.753 97 8 0 4232 4328 166379182 166379086 1.550000e-27 135.0
77 TraesCS2B01G245600 chr5B 100.000 28 0 0 2644 2671 37887990 37888017 1.600000e-02 52.8
78 TraesCS2B01G245600 chr3B 84.211 323 37 8 1146 1461 284565387 284565072 1.440000e-77 302.0
79 TraesCS2B01G245600 chr3B 100.000 28 0 0 2644 2671 759928431 759928458 1.600000e-02 52.8
80 TraesCS2B01G245600 chr3B 100.000 28 0 0 2644 2671 759931283 759931310 1.600000e-02 52.8
81 TraesCS2B01G245600 chr1B 78.038 469 61 25 1676 2104 346445161 346445627 3.170000e-64 257.0
82 TraesCS2B01G245600 chr7B 89.908 109 9 2 4221 4328 162120801 162120908 1.200000e-28 139.0
83 TraesCS2B01G245600 chr1D 89.623 106 10 1 4230 4334 226457618 226457723 5.570000e-27 134.0
84 TraesCS2B01G245600 chr4B 88.785 107 10 2 4222 4328 511163701 511163805 7.210000e-26 130.0
85 TraesCS2B01G245600 chr4A 97.059 34 1 0 343 376 620240795 620240762 3.450000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G245600 chr2B 249516886 249525729 8843 True 16332.000 16332 100.000000 1 8844 1 chr2B.!!$R1 8843
1 TraesCS2B01G245600 chr2A 207588645 207596702 8057 True 1300.125 2457 91.558125 21 8211 8 chr2A.!!$R1 8190
2 TraesCS2B01G245600 chr2D 193393556 193402576 9020 True 953.200 1971 91.288100 180 8210 10 chr2D.!!$R4 8030
3 TraesCS2B01G245600 chr2D 598725684 598726658 974 False 789.000 789 82.365000 1722 2638 1 chr2D.!!$F2 916
4 TraesCS2B01G245600 chr6D 456015117 456016116 999 True 769.000 769 81.548000 1695 2643 1 chr6D.!!$R3 948
5 TraesCS2B01G245600 chr6D 27141345 27142232 887 False 649.000 649 80.926000 1692 2543 1 chr6D.!!$F2 851
6 TraesCS2B01G245600 chr6D 8111995 8112842 847 True 534.000 534 79.463000 1694 2479 1 chr6D.!!$R1 785
7 TraesCS2B01G245600 chr3A 742225037 742226035 998 True 736.000 736 80.952000 1695 2643 1 chr3A.!!$R2 948
8 TraesCS2B01G245600 chr3A 356524560 356525316 756 False 334.300 577 86.707500 1006 2751 2 chr3A.!!$F1 1745
9 TraesCS2B01G245600 chr4D 63105755 63106727 972 True 730.000 730 81.186000 1702 2623 1 chr4D.!!$R1 921
10 TraesCS2B01G245600 chr4D 382336277 382337192 915 True 676.000 676 80.999000 1696 2561 1 chr4D.!!$R2 865
11 TraesCS2B01G245600 chr4D 497270832 497271440 608 False 440.000 440 80.519000 1694 2281 1 chr4D.!!$F2 587
12 TraesCS2B01G245600 chr7D 47111078 47112038 960 False 725.000 725 81.269000 1692 2613 1 chr7D.!!$F2 921
13 TraesCS2B01G245600 chr7D 218003762 218004399 637 False 551.000 551 82.946000 1731 2348 1 chr7D.!!$F3 617
14 TraesCS2B01G245600 chr7D 53315587 53316138 551 False 312.950 538 89.507500 8333 8844 2 chr7D.!!$F6 511
15 TraesCS2B01G245600 chrUn 101937208 101938223 1015 True 695.000 695 80.293000 1695 2643 1 chrUn.!!$R1 948
16 TraesCS2B01G245600 chrUn 95815233 95815776 543 False 309.050 532 90.552500 8338 8844 2 chrUn.!!$F1 506
17 TraesCS2B01G245600 chr3D 586210660 586211654 994 False 693.000 693 80.619000 1719 2637 1 chr3D.!!$F2 918
18 TraesCS2B01G245600 chr3D 590806623 590807285 662 False 490.000 490 80.707000 1692 2345 1 chr3D.!!$F3 653
19 TraesCS2B01G245600 chr3D 199201151 199201707 556 False 270.000 364 85.260000 1313 2850 2 chr3D.!!$F4 1537
20 TraesCS2B01G245600 chr5D 486535750 486536721 971 True 682.000 682 80.341000 1702 2643 1 chr5D.!!$R1 941
21 TraesCS2B01G245600 chr5D 98748358 98749216 858 True 390.000 604 84.481000 1006 2850 2 chr5D.!!$R2 1844
22 TraesCS2B01G245600 chr7A 54732995 54733979 984 True 651.000 651 79.497000 1695 2637 1 chr7A.!!$R1 942
23 TraesCS2B01G245600 chr7A 341435981 341436738 757 False 496.000 496 79.581000 1930 2643 1 chr7A.!!$F1 713
24 TraesCS2B01G245600 chr6B 109137744 109138427 683 True 628.000 628 83.569000 997 1688 1 chr6B.!!$R1 691
25 TraesCS2B01G245600 chr6B 512881553 512882314 761 False 341.500 512 84.145000 1105 2850 2 chr6B.!!$F1 1745
26 TraesCS2B01G245600 chr1A 294139660 294140339 679 True 604.000 604 83.046000 1006 1687 1 chr1A.!!$R1 681
27 TraesCS2B01G245600 chr6A 99420188 99421201 1013 True 582.000 582 78.333000 1702 2643 1 chr6A.!!$R1 941
28 TraesCS2B01G245600 chr5B 489106135 489106881 746 True 358.000 540 85.024000 1121 2850 2 chr5B.!!$R4 1729

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
493 506 0.246360 ATGTCAAGATGGCGTGTCGA 59.754 50.000 0.00 0.0 0.00 4.20 F
2093 3391 0.108281 GGCTGGTTTCGAGGTAGTCC 60.108 60.000 0.00 0.0 0.00 3.85 F
2262 3645 0.107897 ACCACACAGAAGTCAACGCA 60.108 50.000 0.00 0.0 0.00 5.24 F
3639 5256 0.248539 CGTAGCCTAGCCGTCTGTTC 60.249 60.000 0.00 0.0 0.00 3.18 F
4419 6809 0.038744 CCAACCAGACCAAGCCTCAT 59.961 55.000 0.00 0.0 0.00 2.90 F
4518 6908 0.383949 GCACCAAAAGGAAGAACGCA 59.616 50.000 0.00 0.0 0.00 5.24 F
5151 7553 0.884704 TTCGCCAGGTTCAGTCTTGC 60.885 55.000 0.00 0.0 0.00 4.01 F
5948 8390 1.248785 CCCTTGCATGCTGCTCTTGT 61.249 55.000 20.33 0.0 45.31 3.16 F
6014 8456 1.543802 TGAAGCACCCGCAAAAATAGG 59.456 47.619 0.00 0.0 42.27 2.57 F
7415 10053 2.359531 GAGCTGGTTACGCTGAGATACT 59.640 50.000 0.00 0.0 37.96 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2149 3527 0.888619 CTCACCTACTTCGAGCACCA 59.111 55.000 0.00 0.0 0.00 4.17 R
3621 5196 0.248539 CGAACAGACGGCTAGGCTAC 60.249 60.000 15.11 8.0 34.57 3.58 R
4067 5686 1.414919 TGTTGCGAGAGGGTTAGTTGT 59.585 47.619 0.00 0.0 0.00 3.32 R
4729 7121 3.386932 AAAGGGCATGCTATGGAAAGA 57.613 42.857 18.92 0.0 0.00 2.52 R
6106 8548 1.372128 GCGCCAAACAGAAAGCCAG 60.372 57.895 0.00 0.0 0.00 4.85 R
6192 8634 3.314693 TGTGAAACTAGGAGACAGGGTT 58.685 45.455 0.00 0.0 38.04 4.11 R
6939 9542 5.152623 ACTACAGAAGCTGAATGTTAGCA 57.847 39.130 0.82 0.0 43.53 3.49 R
7393 10031 0.461961 ATCTCAGCGTAACCAGCTCC 59.538 55.000 0.00 0.0 44.06 4.70 R
7755 10404 1.281419 TCCGGCCACCTAGAATTCAA 58.719 50.000 8.44 0.0 0.00 2.69 R
8239 10894 0.040425 CACGGCTAAACCAAGCACAC 60.040 55.000 0.00 0.0 44.64 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 4.489737 TCAAACTCCTAAGAACTCCAGGA 58.510 43.478 0.00 0.00 36.97 3.86
69 70 4.776308 TCCTAAGAACTCCAGGAACCTAAC 59.224 45.833 0.00 0.00 35.52 2.34
72 73 3.174779 AGAACTCCAGGAACCTAACCTC 58.825 50.000 0.00 0.00 35.35 3.85
73 74 3.174779 GAACTCCAGGAACCTAACCTCT 58.825 50.000 0.00 0.00 35.35 3.69
74 75 2.822697 ACTCCAGGAACCTAACCTCTC 58.177 52.381 0.00 0.00 35.35 3.20
75 76 2.384029 ACTCCAGGAACCTAACCTCTCT 59.616 50.000 0.00 0.00 35.35 3.10
76 77 3.596956 ACTCCAGGAACCTAACCTCTCTA 59.403 47.826 0.00 0.00 35.35 2.43
81 82 4.712337 CAGGAACCTAACCTCTCTATGTGT 59.288 45.833 0.00 0.00 35.35 3.72
82 83 5.892119 CAGGAACCTAACCTCTCTATGTGTA 59.108 44.000 0.00 0.00 35.35 2.90
86 87 7.229106 GGAACCTAACCTCTCTATGTGTACTAG 59.771 44.444 0.00 0.00 0.00 2.57
90 91 6.458232 AACCTCTCTATGTGTACTAGCAAG 57.542 41.667 0.00 0.00 0.00 4.01
101 102 4.265556 GTGTACTAGCAAGCACATTAGTCG 59.734 45.833 0.00 0.00 31.66 4.18
102 103 2.271800 ACTAGCAAGCACATTAGTCGC 58.728 47.619 0.00 0.00 0.00 5.19
111 112 3.753272 AGCACATTAGTCGCTCATTGTTT 59.247 39.130 0.00 0.00 29.96 2.83
132 135 4.442375 TCTCCAACAATCTCGAGAACTC 57.558 45.455 20.91 0.00 0.00 3.01
134 137 4.156922 TCTCCAACAATCTCGAGAACTCTC 59.843 45.833 20.91 0.00 39.55 3.20
136 139 4.280929 TCCAACAATCTCGAGAACTCTCAA 59.719 41.667 20.91 0.64 43.00 3.02
138 141 4.448537 ACAATCTCGAGAACTCTCAAGG 57.551 45.455 20.91 3.96 43.00 3.61
142 145 1.270826 CTCGAGAACTCTCAAGGCACA 59.729 52.381 6.58 0.00 43.00 4.57
143 146 1.000163 TCGAGAACTCTCAAGGCACAC 60.000 52.381 7.47 0.00 43.00 3.82
144 147 1.269778 CGAGAACTCTCAAGGCACACA 60.270 52.381 7.47 0.00 43.00 3.72
153 156 1.755959 TCAAGGCACACAAATTGCACT 59.244 42.857 0.00 0.00 42.12 4.40
159 162 3.443037 GCACACAAATTGCACTAACACA 58.557 40.909 0.00 0.00 39.93 3.72
167 170 7.324375 CACAAATTGCACTAACACATGTCTTAG 59.676 37.037 16.61 16.61 0.00 2.18
177 180 9.216117 ACTAACACATGTCTTAGGTTAAACATC 57.784 33.333 20.67 0.00 30.16 3.06
178 181 6.721571 ACACATGTCTTAGGTTAAACATCG 57.278 37.500 0.00 0.00 30.16 3.84
184 187 7.193377 TGTCTTAGGTTAAACATCGAAAACC 57.807 36.000 0.00 0.00 41.41 3.27
307 313 6.019779 TGCAATATAAACTGTGAACCAACC 57.980 37.500 0.00 0.00 0.00 3.77
345 356 1.686236 AGGGACATCCTCAACCCATT 58.314 50.000 0.00 0.00 44.06 3.16
347 358 3.197983 AGGGACATCCTCAACCCATTAA 58.802 45.455 0.00 0.00 44.06 1.40
386 397 7.386299 AGACTTGACACTGATACTCACATTTTC 59.614 37.037 0.00 0.00 0.00 2.29
395 406 9.903682 ACTGATACTCACATTTTCTTGAATTTG 57.096 29.630 0.00 0.00 0.00 2.32
402 413 8.364129 TCACATTTTCTTGAATTTGTTTAGGC 57.636 30.769 0.00 0.00 0.00 3.93
404 415 8.829612 CACATTTTCTTGAATTTGTTTAGGCTT 58.170 29.630 0.00 0.00 0.00 4.35
408 419 7.784633 TTCTTGAATTTGTTTAGGCTTTTGG 57.215 32.000 0.00 0.00 0.00 3.28
409 420 5.757808 TCTTGAATTTGTTTAGGCTTTTGGC 59.242 36.000 0.00 0.00 46.43 4.52
432 445 2.358737 GCGTTCAGTGGGTGGAGG 60.359 66.667 0.00 0.00 0.00 4.30
446 459 2.202892 GAGGCGTTCCCATCGACC 60.203 66.667 0.00 0.00 36.97 4.79
481 494 9.121517 GTTTGTGACTATTTCATCAATGTCAAG 57.878 33.333 0.00 0.00 36.00 3.02
485 498 8.127327 GTGACTATTTCATCAATGTCAAGATGG 58.873 37.037 14.93 5.22 41.45 3.51
490 503 2.183478 TCAATGTCAAGATGGCGTGT 57.817 45.000 0.00 0.00 0.00 4.49
493 506 0.246360 ATGTCAAGATGGCGTGTCGA 59.754 50.000 0.00 0.00 0.00 4.20
494 507 0.246360 TGTCAAGATGGCGTGTCGAT 59.754 50.000 0.00 0.00 0.00 3.59
504 517 1.402984 GGCGTGTCGATTCAGTCTCTT 60.403 52.381 0.00 0.00 0.00 2.85
506 519 2.668556 GCGTGTCGATTCAGTCTCTTGA 60.669 50.000 0.00 0.00 0.00 3.02
509 522 4.031089 CGTGTCGATTCAGTCTCTTGAATG 59.969 45.833 6.02 0.00 45.30 2.67
514 527 4.391216 CGATTCAGTCTCTTGAATGTGCTT 59.609 41.667 6.02 0.00 45.30 3.91
532 545 3.131478 GGCGTGGGTGTATGTGCC 61.131 66.667 0.00 0.00 35.04 5.01
591 721 6.486253 AACATTACATTACTCAGCACTGTG 57.514 37.500 2.76 2.76 0.00 3.66
604 734 2.427453 AGCACTGTGAATACTAGGACCG 59.573 50.000 12.86 0.00 0.00 4.79
636 768 3.631250 TCAGGATACAGGGGCATTTTTC 58.369 45.455 0.00 0.00 41.41 2.29
647 779 6.003326 CAGGGGCATTTTTCCAACTAAAAAT 58.997 36.000 0.00 0.00 45.42 1.82
836 2064 1.380112 AGCGGTACTCTGGACTCCC 60.380 63.158 0.00 0.00 0.00 4.30
1113 2351 0.110869 TGGGGTTTGGTTTAGTCGGG 59.889 55.000 0.00 0.00 0.00 5.14
1181 2419 2.820037 GCTTGGGTACTCGGCAGC 60.820 66.667 5.76 1.16 0.00 5.25
1200 2439 5.060940 GGCAGCAATGATTTACGTCTTTTTC 59.939 40.000 0.00 0.00 0.00 2.29
1291 2531 7.462200 CGTGGTAATACCGAAAATGCAAAAATC 60.462 37.037 4.83 0.00 42.58 2.17
1361 2602 1.523934 GCATTGTGCAGTGCTGTTTTC 59.476 47.619 17.60 0.00 44.26 2.29
1621 2874 7.382218 AGCACAAAATAAGTAACATTGCTGTTC 59.618 33.333 0.00 0.00 44.43 3.18
1635 2888 5.437289 TTGCTGTTCTCATGTTCGATTTT 57.563 34.783 0.00 0.00 0.00 1.82
1684 2937 2.158914 CCATAAGGAAAAGGGCATTGCC 60.159 50.000 19.81 19.81 42.80 4.52
1711 2964 9.695155 CTTTTGTAAAAGGAATAGAGGGGATAA 57.305 33.333 8.81 0.00 41.23 1.75
1720 2973 5.045505 GGAATAGAGGGGATAAGGTGGATTC 60.046 48.000 0.00 0.00 0.00 2.52
1725 2978 2.092592 GGGGATAAGGTGGATTCGTTGT 60.093 50.000 0.00 0.00 0.00 3.32
1759 3014 4.873746 CCTCGTGGGCATATATATAGGG 57.126 50.000 6.54 0.00 0.00 3.53
1912 3207 4.373116 CCCCACAGTCGGACGGTG 62.373 72.222 27.44 27.44 42.61 4.94
1922 3218 2.588877 GGACGGTGGATGCATCGG 60.589 66.667 24.17 11.55 32.14 4.18
1939 3235 2.670148 GGGGAAGTCGTGGCTGGAT 61.670 63.158 0.00 0.00 0.00 3.41
2077 3375 1.608717 GATGTCGAGTCAGGGTGGCT 61.609 60.000 0.00 0.00 33.30 4.75
2081 3379 2.883828 CGAGTCAGGGTGGCTGGTT 61.884 63.158 0.00 0.00 28.93 3.67
2093 3391 0.108281 GGCTGGTTTCGAGGTAGTCC 60.108 60.000 0.00 0.00 0.00 3.85
2149 3527 4.587189 GGTTAGGAGCGCGGCGAT 62.587 66.667 28.54 22.42 0.00 4.58
2201 3579 1.815003 CATGATGAAGACCGGCGCA 60.815 57.895 10.83 0.00 0.00 6.09
2228 3606 3.563512 ATTCCCGCGCCTAGGAAT 58.436 55.556 21.98 21.98 45.62 3.01
2262 3645 0.107897 ACCACACAGAAGTCAACGCA 60.108 50.000 0.00 0.00 0.00 5.24
2281 3666 2.264794 GTGGACGGCGAAGTGGAT 59.735 61.111 16.62 0.00 0.00 3.41
2657 4125 4.275936 GCGGTGCTGTTTCCTAATAATCAT 59.724 41.667 0.00 0.00 0.00 2.45
2704 4172 9.632638 ATGTGAATAATTGGTCTGCTACTATTT 57.367 29.630 0.00 0.00 0.00 1.40
2719 4187 6.816640 TGCTACTATTTGGTTTGCTGTAGTAG 59.183 38.462 11.19 11.19 41.90 2.57
2763 4235 5.243207 AGTTATGTAGTCCAAACCCTTTCG 58.757 41.667 0.00 0.00 0.00 3.46
2767 4239 5.486735 TGTAGTCCAAACCCTTTCGAATA 57.513 39.130 0.00 0.00 0.00 1.75
2906 4428 3.084039 TCTGGAACCAATGCATCACTTC 58.916 45.455 0.00 0.62 0.00 3.01
2907 4429 2.821378 CTGGAACCAATGCATCACTTCA 59.179 45.455 0.00 0.00 0.00 3.02
2908 4430 3.433343 TGGAACCAATGCATCACTTCAT 58.567 40.909 0.00 0.00 0.00 2.57
2909 4431 3.444742 TGGAACCAATGCATCACTTCATC 59.555 43.478 0.00 0.00 0.00 2.92
2910 4432 3.444742 GGAACCAATGCATCACTTCATCA 59.555 43.478 0.00 0.00 0.00 3.07
2911 4433 4.418392 GAACCAATGCATCACTTCATCAC 58.582 43.478 0.00 0.00 0.00 3.06
2912 4434 3.693807 ACCAATGCATCACTTCATCACT 58.306 40.909 0.00 0.00 0.00 3.41
2913 4435 4.084287 ACCAATGCATCACTTCATCACTT 58.916 39.130 0.00 0.00 0.00 3.16
2914 4436 4.082408 ACCAATGCATCACTTCATCACTTG 60.082 41.667 0.00 0.00 0.00 3.16
2915 4437 4.157105 CCAATGCATCACTTCATCACTTGA 59.843 41.667 0.00 0.00 0.00 3.02
3304 4867 9.174166 CTTGCTATTGTTATTTACCTGTTACCT 57.826 33.333 0.00 0.00 0.00 3.08
3584 5159 5.163754 GCACTAGCCAGATATTCGTTTGTTT 60.164 40.000 0.00 0.00 33.58 2.83
3611 5186 8.673711 GTTTGCACACCATAATTCATAGTAAGA 58.326 33.333 0.00 0.00 0.00 2.10
3639 5256 0.248539 CGTAGCCTAGCCGTCTGTTC 60.249 60.000 0.00 0.00 0.00 3.18
3700 5318 6.959361 ACTTTGTTAATAATGATAGGCAGCG 58.041 36.000 5.08 0.00 0.00 5.18
3832 5450 6.263617 ACAGTAAGATTCGATCTCTTCCTACC 59.736 42.308 12.53 1.24 39.08 3.18
3950 5568 5.741011 TCAGGTCTTATGCTTTCCGTAATT 58.259 37.500 0.00 0.00 0.00 1.40
3990 5608 7.807907 CCTTATTACGTTGCTTGTTGAAAATCT 59.192 33.333 0.00 0.00 0.00 2.40
3991 5609 8.722342 TTATTACGTTGCTTGTTGAAAATCTC 57.278 30.769 0.00 0.00 0.00 2.75
4045 5664 3.737266 TCTTCACGCGGTGTACTTTAAAG 59.263 43.478 12.47 13.76 34.79 1.85
4046 5665 3.367992 TCACGCGGTGTACTTTAAAGA 57.632 42.857 21.92 2.93 34.79 2.52
4067 5686 8.827832 AAAGATCCTGGTTATGAAAATCATCA 57.172 30.769 0.00 0.00 38.26 3.07
4096 5715 1.734465 CCTCTCGCAACAGAATTCACC 59.266 52.381 8.44 0.00 0.00 4.02
4140 5760 2.008242 AAGTAGCCAATTTGCCACCA 57.992 45.000 0.00 0.00 0.00 4.17
4256 5877 5.103473 ACTCCCTCTGATCCATAGTAAGTGA 60.103 44.000 0.00 0.00 0.00 3.41
4275 5896 2.256117 ACGCAGTTTTGAGCTAAGGT 57.744 45.000 0.00 0.00 37.78 3.50
4276 5897 2.572290 ACGCAGTTTTGAGCTAAGGTT 58.428 42.857 0.00 0.00 37.78 3.50
4277 5898 3.735591 ACGCAGTTTTGAGCTAAGGTTA 58.264 40.909 0.00 0.00 37.78 2.85
4278 5899 3.746492 ACGCAGTTTTGAGCTAAGGTTAG 59.254 43.478 0.00 0.00 37.78 2.34
4279 5900 3.746492 CGCAGTTTTGAGCTAAGGTTAGT 59.254 43.478 0.00 0.00 33.32 2.24
4280 5901 4.213482 CGCAGTTTTGAGCTAAGGTTAGTT 59.787 41.667 0.00 0.00 33.32 2.24
4281 5902 5.614887 CGCAGTTTTGAGCTAAGGTTAGTTC 60.615 44.000 6.64 6.64 40.22 3.01
4282 5903 5.238650 GCAGTTTTGAGCTAAGGTTAGTTCA 59.761 40.000 11.09 11.09 45.30 3.18
4301 5922 4.911514 TCAACCTTAGTTCAAAACTGCC 57.088 40.909 2.65 0.00 42.84 4.85
4311 5932 5.591099 AGTTCAAAACTGCCACACTTATTG 58.409 37.500 0.00 0.00 41.01 1.90
4377 6741 3.244009 CGCATCTCTCTCTCTCTCTCTCT 60.244 52.174 0.00 0.00 0.00 3.10
4385 6749 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
4399 6789 4.219115 TCTCTCTCTCTCTCTCTCTCTCC 58.781 52.174 0.00 0.00 0.00 3.71
4419 6809 0.038744 CCAACCAGACCAAGCCTCAT 59.961 55.000 0.00 0.00 0.00 2.90
4489 6879 1.980772 GGCTGCTTCCATTGCACCT 60.981 57.895 0.00 0.00 36.37 4.00
4494 6884 1.180029 GCTTCCATTGCACCTGTCAT 58.820 50.000 0.00 0.00 0.00 3.06
4518 6908 0.383949 GCACCAAAAGGAAGAACGCA 59.616 50.000 0.00 0.00 0.00 5.24
4554 6944 3.454082 CCTGCAGAAGAGAGTTTAGGGAT 59.546 47.826 17.39 0.00 0.00 3.85
4640 7030 3.567478 ATAGGTCAGTGCCTCCATTTC 57.433 47.619 9.08 0.00 39.94 2.17
4660 7050 6.464895 TTTCTTTGAAGTTGCTTTTGTGTG 57.535 33.333 0.00 0.00 0.00 3.82
4745 7137 6.639632 TCTTATTTCTTTCCATAGCATGCC 57.360 37.500 15.66 0.00 0.00 4.40
4746 7138 5.536161 TCTTATTTCTTTCCATAGCATGCCC 59.464 40.000 15.66 0.00 0.00 5.36
5046 7448 6.561737 TGTCAAAGATATTTTACGCACCAA 57.438 33.333 0.00 0.00 0.00 3.67
5067 7469 6.070538 ACCAACATCTAACTGCTAGACATTCT 60.071 38.462 0.00 0.00 39.52 2.40
5147 7549 2.450609 TACTTTCGCCAGGTTCAGTC 57.549 50.000 0.00 0.00 0.00 3.51
5151 7553 0.884704 TTCGCCAGGTTCAGTCTTGC 60.885 55.000 0.00 0.00 0.00 4.01
5635 8043 9.136952 CTGTGTAAGAGGTGTGTACTAATTAAC 57.863 37.037 0.00 0.00 0.00 2.01
5929 8371 4.436050 CCGTCTTGTCATGATTTAGTGTGC 60.436 45.833 0.00 0.00 0.00 4.57
5948 8390 1.248785 CCCTTGCATGCTGCTCTTGT 61.249 55.000 20.33 0.00 45.31 3.16
6011 8453 2.158971 AGTTTGAAGCACCCGCAAAAAT 60.159 40.909 0.00 0.00 42.27 1.82
6014 8456 1.543802 TGAAGCACCCGCAAAAATAGG 59.456 47.619 0.00 0.00 42.27 2.57
6068 8510 9.686683 ATTTACCTATCTTCCATATTGCATACC 57.313 33.333 0.00 0.00 0.00 2.73
6070 8512 5.118990 CCTATCTTCCATATTGCATACCGG 58.881 45.833 0.00 0.00 0.00 5.28
6106 8548 6.681368 GCAGGATTGTCTATTTTCATTCCCAC 60.681 42.308 0.00 0.00 35.79 4.61
6221 8663 4.508124 GTCTCCTAGTTTCACATATTGGCG 59.492 45.833 0.00 0.00 0.00 5.69
6398 8998 9.003658 CATACTGAAACTGTAAACCTCATTCTT 57.996 33.333 0.00 0.00 0.00 2.52
6409 9009 6.743575 AAACCTCATTCTTCCAATACTTCG 57.256 37.500 0.00 0.00 0.00 3.79
6410 9010 5.422214 ACCTCATTCTTCCAATACTTCGT 57.578 39.130 0.00 0.00 0.00 3.85
6429 9029 6.993902 ACTTCGTGTTAATTTTACCCTCAAGA 59.006 34.615 0.00 0.00 0.00 3.02
6436 9036 9.667107 TGTTAATTTTACCCTCAAGATCAGTAG 57.333 33.333 0.00 0.00 0.00 2.57
6553 9153 5.913137 TGTTATGAATCACATGGTTTCCC 57.087 39.130 0.00 0.00 39.77 3.97
6570 9170 8.893563 TGGTTTCCCATTGTTCTTCTTATATT 57.106 30.769 0.00 0.00 35.17 1.28
6571 9171 8.748412 TGGTTTCCCATTGTTCTTCTTATATTG 58.252 33.333 0.00 0.00 35.17 1.90
6572 9172 8.749354 GGTTTCCCATTGTTCTTCTTATATTGT 58.251 33.333 0.00 0.00 0.00 2.71
6628 9228 4.333372 ACATGGGTTATTTTTACTACCGCG 59.667 41.667 0.00 0.00 0.00 6.46
6636 9236 5.994887 ATTTTTACTACCGCGCAATATCA 57.005 34.783 8.75 0.00 0.00 2.15
6681 9281 3.596214 TCGTAATGAACTTCTTGAGGGC 58.404 45.455 0.00 0.00 0.00 5.19
6839 9442 2.495270 TGTGCTTGCTTTGGAAGACAAA 59.505 40.909 3.08 0.00 46.34 2.83
6938 9541 7.497595 GGGTCAAAAAGGTAAATGAACTTCTT 58.502 34.615 0.00 0.00 30.31 2.52
6939 9542 7.985184 GGGTCAAAAAGGTAAATGAACTTCTTT 59.015 33.333 0.00 0.00 30.31 2.52
6951 9554 8.807667 AAATGAACTTCTTTGCTAACATTCAG 57.192 30.769 0.00 0.00 0.00 3.02
6952 9555 5.762045 TGAACTTCTTTGCTAACATTCAGC 58.238 37.500 0.00 0.00 39.56 4.26
6953 9556 5.532406 TGAACTTCTTTGCTAACATTCAGCT 59.468 36.000 0.00 0.00 39.83 4.24
6996 9631 5.395682 TGCATGGAGAAAGGATTCTTTTG 57.604 39.130 0.00 0.00 45.91 2.44
7393 10031 7.748847 AGCATTACCTACAAATTGTAAAGACG 58.251 34.615 7.30 0.00 31.67 4.18
7415 10053 2.359531 GAGCTGGTTACGCTGAGATACT 59.640 50.000 0.00 0.00 37.96 2.12
7608 10254 6.935771 GCTGATTCTCATTTATCATCAGGTCT 59.064 38.462 9.02 0.00 40.78 3.85
7755 10404 3.233507 ACATGGCTGATGTTTGAACCTT 58.766 40.909 0.00 0.00 43.20 3.50
7846 10495 3.330701 AGCTAGGGAAGGACATTTGAACA 59.669 43.478 0.00 0.00 0.00 3.18
7879 10528 0.247736 AGAAGCGCTCGATTCCTTGT 59.752 50.000 12.06 0.00 40.95 3.16
7900 10549 6.795098 TGTGGTTGCACTAGTTAGTAATTG 57.205 37.500 0.00 0.00 34.13 2.32
8063 10712 6.873076 CCTTATAGCTTCATCCTGATCTTGTC 59.127 42.308 0.00 0.00 0.00 3.18
8085 10740 4.225942 TCACCAGTCCAATTTCAGCTCTAT 59.774 41.667 0.00 0.00 0.00 1.98
8126 10781 2.309528 TCTAAGTAATGTGCTGGCGG 57.690 50.000 0.00 0.00 0.00 6.13
8151 10806 3.605486 GCATGTGATTTTCTTGTTCTCGC 59.395 43.478 0.00 0.00 0.00 5.03
8169 10824 1.594862 CGCTCGGATGTCTGAAATTCC 59.405 52.381 0.00 0.00 0.00 3.01
8176 10831 5.817296 TCGGATGTCTGAAATTCCTTGTATG 59.183 40.000 0.00 0.00 0.00 2.39
8198 10853 4.030134 GGTACCAGTCTGTAGTCATTCG 57.970 50.000 7.15 0.00 0.00 3.34
8211 10866 2.831742 ATTCGCTGCATGGCTGGG 60.832 61.111 0.00 5.93 40.56 4.45
8212 10867 3.348554 ATTCGCTGCATGGCTGGGA 62.349 57.895 10.03 10.03 44.47 4.37
8213 10868 4.032452 TCGCTGCATGGCTGGGAA 62.032 61.111 11.34 0.00 43.60 3.97
8214 10869 3.063704 CGCTGCATGGCTGGGAAA 61.064 61.111 0.00 0.00 41.40 3.13
8215 10870 2.638354 CGCTGCATGGCTGGGAAAA 61.638 57.895 0.00 0.00 41.40 2.29
8216 10871 1.902556 GCTGCATGGCTGGGAAAAT 59.097 52.632 0.00 0.00 0.00 1.82
8217 10872 0.179092 GCTGCATGGCTGGGAAAATC 60.179 55.000 0.00 0.00 0.00 2.17
8218 10873 1.187974 CTGCATGGCTGGGAAAATCA 58.812 50.000 0.00 0.00 0.00 2.57
8219 10874 1.760613 CTGCATGGCTGGGAAAATCAT 59.239 47.619 0.00 0.00 0.00 2.45
8220 10875 2.960384 CTGCATGGCTGGGAAAATCATA 59.040 45.455 0.00 0.00 0.00 2.15
8221 10876 3.372897 TGCATGGCTGGGAAAATCATAA 58.627 40.909 0.00 0.00 0.00 1.90
8222 10877 3.968649 TGCATGGCTGGGAAAATCATAAT 59.031 39.130 0.00 0.00 0.00 1.28
8223 10878 4.409574 TGCATGGCTGGGAAAATCATAATT 59.590 37.500 0.00 0.00 0.00 1.40
8224 10879 5.104444 TGCATGGCTGGGAAAATCATAATTT 60.104 36.000 0.00 0.00 36.64 1.82
8225 10880 5.824097 GCATGGCTGGGAAAATCATAATTTT 59.176 36.000 0.00 0.00 45.55 1.82
8226 10881 6.238538 GCATGGCTGGGAAAATCATAATTTTG 60.239 38.462 0.00 0.00 43.48 2.44
8227 10882 6.371595 TGGCTGGGAAAATCATAATTTTGT 57.628 33.333 0.00 0.00 43.48 2.83
8228 10883 6.777782 TGGCTGGGAAAATCATAATTTTGTT 58.222 32.000 0.00 0.00 43.48 2.83
8229 10884 6.878389 TGGCTGGGAAAATCATAATTTTGTTC 59.122 34.615 0.00 0.00 43.48 3.18
8230 10885 7.105588 GGCTGGGAAAATCATAATTTTGTTCT 58.894 34.615 0.00 0.00 43.48 3.01
8231 10886 7.278646 GGCTGGGAAAATCATAATTTTGTTCTC 59.721 37.037 0.00 0.00 43.48 2.87
8232 10887 8.037166 GCTGGGAAAATCATAATTTTGTTCTCT 58.963 33.333 0.00 0.00 43.48 3.10
8233 10888 9.578439 CTGGGAAAATCATAATTTTGTTCTCTC 57.422 33.333 0.00 0.00 43.48 3.20
8234 10889 8.531146 TGGGAAAATCATAATTTTGTTCTCTCC 58.469 33.333 0.00 0.00 43.48 3.71
8235 10890 8.531146 GGGAAAATCATAATTTTGTTCTCTCCA 58.469 33.333 0.00 0.00 43.48 3.86
8240 10895 9.471702 AATCATAATTTTGTTCTCTCCATGAGT 57.528 29.630 0.00 0.00 43.13 3.41
8241 10896 8.272545 TCATAATTTTGTTCTCTCCATGAGTG 57.727 34.615 0.00 0.00 43.13 3.51
8242 10897 7.884877 TCATAATTTTGTTCTCTCCATGAGTGT 59.115 33.333 0.00 0.00 43.13 3.55
8243 10898 5.954296 ATTTTGTTCTCTCCATGAGTGTG 57.046 39.130 0.00 0.00 43.13 3.82
8244 10899 2.462456 TGTTCTCTCCATGAGTGTGC 57.538 50.000 0.00 0.00 43.13 4.57
8245 10900 1.973515 TGTTCTCTCCATGAGTGTGCT 59.026 47.619 0.00 0.00 43.13 4.40
8246 10901 2.369860 TGTTCTCTCCATGAGTGTGCTT 59.630 45.455 0.00 0.00 43.13 3.91
8247 10902 2.740981 GTTCTCTCCATGAGTGTGCTTG 59.259 50.000 0.00 0.00 43.13 4.01
8248 10903 1.277273 TCTCTCCATGAGTGTGCTTGG 59.723 52.381 0.00 0.00 43.13 3.61
8249 10904 1.002888 CTCTCCATGAGTGTGCTTGGT 59.997 52.381 0.00 0.00 37.99 3.67
8250 10905 1.421268 TCTCCATGAGTGTGCTTGGTT 59.579 47.619 0.00 0.00 35.30 3.67
8251 10906 2.158623 TCTCCATGAGTGTGCTTGGTTT 60.159 45.455 0.00 0.00 35.30 3.27
8252 10907 3.072330 TCTCCATGAGTGTGCTTGGTTTA 59.928 43.478 0.00 0.00 35.30 2.01
8253 10908 3.411446 TCCATGAGTGTGCTTGGTTTAG 58.589 45.455 0.00 0.00 35.30 1.85
8254 10909 2.095059 CCATGAGTGTGCTTGGTTTAGC 60.095 50.000 0.00 0.00 41.59 3.09
8255 10910 1.604604 TGAGTGTGCTTGGTTTAGCC 58.395 50.000 0.00 0.00 40.49 3.93
8256 10911 0.517316 GAGTGTGCTTGGTTTAGCCG 59.483 55.000 0.00 0.00 40.49 5.52
8257 10912 0.179029 AGTGTGCTTGGTTTAGCCGT 60.179 50.000 0.00 0.00 40.49 5.68
8258 10913 0.040425 GTGTGCTTGGTTTAGCCGTG 60.040 55.000 0.00 0.00 40.49 4.94
8259 10914 1.169661 TGTGCTTGGTTTAGCCGTGG 61.170 55.000 0.00 0.00 40.49 4.94
8260 10915 2.265182 TGCTTGGTTTAGCCGTGGC 61.265 57.895 1.67 1.67 40.49 5.01
8270 10925 4.248402 GCCGTGGCGCGTATAATA 57.752 55.556 20.01 0.00 39.32 0.98
8271 10926 2.067616 GCCGTGGCGCGTATAATAG 58.932 57.895 20.01 2.90 39.32 1.73
8272 10927 0.665369 GCCGTGGCGCGTATAATAGT 60.665 55.000 20.01 0.00 39.32 2.12
8273 10928 1.774639 CCGTGGCGCGTATAATAGTT 58.225 50.000 20.01 0.00 39.32 2.24
8274 10929 1.454276 CCGTGGCGCGTATAATAGTTG 59.546 52.381 20.01 0.00 39.32 3.16
8275 10930 2.121786 CGTGGCGCGTATAATAGTTGT 58.878 47.619 13.13 0.00 35.54 3.32
8276 10931 2.152489 CGTGGCGCGTATAATAGTTGTC 59.848 50.000 13.13 0.00 35.54 3.18
8277 10932 2.473984 GTGGCGCGTATAATAGTTGTCC 59.526 50.000 8.43 0.00 0.00 4.02
8278 10933 2.064014 GGCGCGTATAATAGTTGTCCC 58.936 52.381 8.43 0.00 0.00 4.46
8279 10934 2.064014 GCGCGTATAATAGTTGTCCCC 58.936 52.381 8.43 0.00 0.00 4.81
8280 10935 2.322161 CGCGTATAATAGTTGTCCCCG 58.678 52.381 0.00 0.00 0.00 5.73
8281 10936 2.030893 CGCGTATAATAGTTGTCCCCGA 60.031 50.000 0.00 0.00 0.00 5.14
8282 10937 3.550639 CGCGTATAATAGTTGTCCCCGAA 60.551 47.826 0.00 0.00 0.00 4.30
8283 10938 3.737774 GCGTATAATAGTTGTCCCCGAAC 59.262 47.826 0.00 0.00 0.00 3.95
8284 10939 4.500375 GCGTATAATAGTTGTCCCCGAACT 60.500 45.833 0.00 0.00 37.43 3.01
8285 10940 5.594926 CGTATAATAGTTGTCCCCGAACTT 58.405 41.667 0.00 0.00 35.30 2.66
8286 10941 5.461078 CGTATAATAGTTGTCCCCGAACTTG 59.539 44.000 0.00 0.00 35.30 3.16
8287 10942 5.687166 ATAATAGTTGTCCCCGAACTTGA 57.313 39.130 0.00 0.00 35.30 3.02
8288 10943 3.611766 ATAGTTGTCCCCGAACTTGAG 57.388 47.619 0.00 0.00 35.30 3.02
8289 10944 1.420430 AGTTGTCCCCGAACTTGAGA 58.580 50.000 0.00 0.00 28.94 3.27
8290 10945 1.766496 AGTTGTCCCCGAACTTGAGAA 59.234 47.619 0.00 0.00 28.94 2.87
8291 10946 2.171870 AGTTGTCCCCGAACTTGAGAAA 59.828 45.455 0.00 0.00 28.94 2.52
8292 10947 3.146847 GTTGTCCCCGAACTTGAGAAAT 58.853 45.455 0.00 0.00 0.00 2.17
8293 10948 2.778299 TGTCCCCGAACTTGAGAAATG 58.222 47.619 0.00 0.00 0.00 2.32
8294 10949 1.468914 GTCCCCGAACTTGAGAAATGC 59.531 52.381 0.00 0.00 0.00 3.56
8295 10950 1.351017 TCCCCGAACTTGAGAAATGCT 59.649 47.619 0.00 0.00 0.00 3.79
8296 10951 1.740025 CCCCGAACTTGAGAAATGCTC 59.260 52.381 0.00 0.00 44.21 4.26
8297 10952 1.740025 CCCGAACTTGAGAAATGCTCC 59.260 52.381 0.00 0.00 43.26 4.70
8298 10953 2.426522 CCGAACTTGAGAAATGCTCCA 58.573 47.619 0.00 0.00 43.26 3.86
8299 10954 2.813754 CCGAACTTGAGAAATGCTCCAA 59.186 45.455 0.00 0.00 43.26 3.53
8300 10955 3.441572 CCGAACTTGAGAAATGCTCCAAT 59.558 43.478 0.00 0.00 43.26 3.16
8301 10956 4.635765 CCGAACTTGAGAAATGCTCCAATA 59.364 41.667 0.00 0.00 43.26 1.90
8302 10957 5.123820 CCGAACTTGAGAAATGCTCCAATAA 59.876 40.000 0.00 0.00 43.26 1.40
8303 10958 6.253746 CGAACTTGAGAAATGCTCCAATAAG 58.746 40.000 0.00 0.00 43.26 1.73
8304 10959 6.092670 CGAACTTGAGAAATGCTCCAATAAGA 59.907 38.462 0.00 0.00 43.26 2.10
8305 10960 7.201679 CGAACTTGAGAAATGCTCCAATAAGAT 60.202 37.037 0.00 0.00 43.26 2.40
8306 10961 7.565323 ACTTGAGAAATGCTCCAATAAGATC 57.435 36.000 0.00 0.00 43.26 2.75
8307 10962 6.545298 ACTTGAGAAATGCTCCAATAAGATCC 59.455 38.462 0.00 0.00 43.26 3.36
8308 10963 6.257994 TGAGAAATGCTCCAATAAGATCCT 57.742 37.500 0.00 0.00 43.26 3.24
8309 10964 6.060136 TGAGAAATGCTCCAATAAGATCCTG 58.940 40.000 0.00 0.00 43.26 3.86
8310 10965 5.383476 AGAAATGCTCCAATAAGATCCTGG 58.617 41.667 0.00 0.00 0.00 4.45
8311 10966 5.133322 AGAAATGCTCCAATAAGATCCTGGA 59.867 40.000 0.00 0.00 36.89 3.86
8312 10967 5.393068 AATGCTCCAATAAGATCCTGGAA 57.607 39.130 0.00 0.00 38.75 3.53
8313 10968 5.595814 ATGCTCCAATAAGATCCTGGAAT 57.404 39.130 0.00 0.00 38.75 3.01
8314 10969 4.722220 TGCTCCAATAAGATCCTGGAATG 58.278 43.478 0.00 0.00 38.75 2.67
8315 10970 4.166725 TGCTCCAATAAGATCCTGGAATGT 59.833 41.667 0.00 0.00 38.75 2.71
8316 10971 4.518211 GCTCCAATAAGATCCTGGAATGTG 59.482 45.833 0.00 0.00 38.75 3.21
8317 10972 5.688500 GCTCCAATAAGATCCTGGAATGTGA 60.689 44.000 0.00 0.00 38.75 3.58
8318 10973 6.325993 TCCAATAAGATCCTGGAATGTGAA 57.674 37.500 0.00 0.00 36.30 3.18
8319 10974 6.730447 TCCAATAAGATCCTGGAATGTGAAA 58.270 36.000 0.00 0.00 36.30 2.69
8320 10975 7.181361 TCCAATAAGATCCTGGAATGTGAAAA 58.819 34.615 0.00 0.00 36.30 2.29
8321 10976 7.122650 TCCAATAAGATCCTGGAATGTGAAAAC 59.877 37.037 0.00 0.00 36.30 2.43
8322 10977 7.093814 CCAATAAGATCCTGGAATGTGAAAACA 60.094 37.037 0.00 0.00 31.38 2.83
8323 10978 8.472413 CAATAAGATCCTGGAATGTGAAAACAT 58.528 33.333 0.00 0.00 0.00 2.71
8324 10979 5.909621 AGATCCTGGAATGTGAAAACATG 57.090 39.130 0.00 0.00 0.00 3.21
8325 10980 4.708421 AGATCCTGGAATGTGAAAACATGG 59.292 41.667 0.00 0.00 0.00 3.66
8326 10981 3.164268 TCCTGGAATGTGAAAACATGGG 58.836 45.455 0.00 0.00 0.00 4.00
8327 10982 2.354003 CCTGGAATGTGAAAACATGGGC 60.354 50.000 0.00 0.00 0.00 5.36
8328 10983 2.564062 CTGGAATGTGAAAACATGGGCT 59.436 45.455 0.00 0.00 0.00 5.19
8329 10984 2.971330 TGGAATGTGAAAACATGGGCTT 59.029 40.909 0.00 0.00 0.00 4.35
8330 10985 3.390639 TGGAATGTGAAAACATGGGCTTT 59.609 39.130 0.00 0.00 0.00 3.51
8331 10986 3.747529 GGAATGTGAAAACATGGGCTTTG 59.252 43.478 0.00 0.00 0.00 2.77
8332 10987 2.237393 TGTGAAAACATGGGCTTTGC 57.763 45.000 0.00 0.00 0.00 3.68
8363 11018 4.065281 CCCCGCGTCGTCTCCTTT 62.065 66.667 4.92 0.00 0.00 3.11
8396 11088 1.002502 GAAACCCTAACTGCCGCCT 60.003 57.895 0.00 0.00 0.00 5.52
8398 11090 1.489560 AAACCCTAACTGCCGCCTCT 61.490 55.000 0.00 0.00 0.00 3.69
8418 11110 3.449227 CAGAGGAGTGCGCCGGTA 61.449 66.667 4.18 0.00 0.00 4.02
8429 11121 4.570663 GCCGGTATGCGCTCGACT 62.571 66.667 9.73 0.00 0.00 4.18
8430 11122 2.104331 CCGGTATGCGCTCGACTT 59.896 61.111 9.73 0.00 0.00 3.01
8469 11161 1.153086 GATCCGGCAGCTCCACATT 60.153 57.895 0.00 0.00 34.01 2.71
8484 11176 4.740822 ATTGCGTGGTGGGCCTCC 62.741 66.667 17.79 17.79 35.27 4.30
8515 11207 3.382832 CGACCTTGGGCGGAGAGT 61.383 66.667 7.07 0.00 0.00 3.24
8552 11245 1.613630 AGGCCATTCCTGTCGGAGT 60.614 57.895 5.01 0.00 45.54 3.85
8561 11254 1.185618 CCTGTCGGAGTTGGTGAGGA 61.186 60.000 0.00 0.00 0.00 3.71
8675 11368 1.790635 ATCCTCTCCGCCCCGATCTA 61.791 60.000 0.00 0.00 0.00 1.98
8684 11377 0.470268 GCCCCGATCTACTCCTTCCT 60.470 60.000 0.00 0.00 0.00 3.36
8690 11383 2.032620 GATCTACTCCTTCCTTCGCCA 58.967 52.381 0.00 0.00 0.00 5.69
8712 11405 0.263765 TCCGGGTCCTAGTGGCTTAT 59.736 55.000 0.00 0.00 0.00 1.73
8747 11440 3.126879 CTGGCTGCGCGGATTTCA 61.127 61.111 23.20 10.84 0.00 2.69
8764 11457 1.285280 TCATCGAGTGGGGTTGGATT 58.715 50.000 0.00 0.00 0.00 3.01
8774 11467 0.032515 GGGTTGGATTCGGGGGAAAT 60.033 55.000 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.890629 AGATTATTACTGCACAACATAGAAGAA 57.109 29.630 0.00 0.00 0.00 2.52
2 3 9.890629 AAGATTATTACTGCACAACATAGAAGA 57.109 29.630 0.00 0.00 0.00 2.87
4 5 9.109393 GGAAGATTATTACTGCACAACATAGAA 57.891 33.333 0.00 0.00 0.00 2.10
5 6 7.438160 CGGAAGATTATTACTGCACAACATAGA 59.562 37.037 0.00 0.00 0.00 1.98
11 12 5.730550 ACTCGGAAGATTATTACTGCACAA 58.269 37.500 0.00 0.00 40.84 3.33
12 13 5.339008 ACTCGGAAGATTATTACTGCACA 57.661 39.130 0.00 0.00 40.84 4.57
41 42 4.891992 TCCTGGAGTTCTTAGGAGTTTG 57.108 45.455 0.00 0.00 35.76 2.93
62 63 6.546772 GCTAGTACACATAGAGAGGTTAGGTT 59.453 42.308 0.00 0.00 0.00 3.50
69 70 4.339530 TGCTTGCTAGTACACATAGAGAGG 59.660 45.833 0.00 0.00 0.00 3.69
72 73 4.998788 TGTGCTTGCTAGTACACATAGAG 58.001 43.478 14.38 0.00 41.29 2.43
81 82 3.130516 AGCGACTAATGTGCTTGCTAGTA 59.869 43.478 0.00 0.00 34.80 1.82
82 83 2.093973 AGCGACTAATGTGCTTGCTAGT 60.094 45.455 0.00 0.00 34.80 2.57
86 87 1.078709 TGAGCGACTAATGTGCTTGC 58.921 50.000 0.00 0.00 39.49 4.01
90 91 3.747099 AACAATGAGCGACTAATGTGC 57.253 42.857 0.00 0.00 0.00 4.57
111 112 4.082845 AGAGTTCTCGAGATTGTTGGAGA 58.917 43.478 17.44 0.00 33.96 3.71
124 127 1.269778 TGTGTGCCTTGAGAGTTCTCG 60.270 52.381 4.80 0.00 45.72 4.04
125 128 2.533266 TGTGTGCCTTGAGAGTTCTC 57.467 50.000 2.16 2.16 43.15 2.87
127 130 4.293415 CAATTTGTGTGCCTTGAGAGTTC 58.707 43.478 0.00 0.00 0.00 3.01
132 135 2.129607 GTGCAATTTGTGTGCCTTGAG 58.870 47.619 0.00 0.00 41.49 3.02
134 137 2.228138 AGTGCAATTTGTGTGCCTTG 57.772 45.000 0.00 0.00 41.49 3.61
136 139 2.692557 TGTTAGTGCAATTTGTGTGCCT 59.307 40.909 0.00 0.00 41.49 4.75
138 141 3.443037 TGTGTTAGTGCAATTTGTGTGC 58.557 40.909 0.00 0.00 42.55 4.57
142 145 5.772825 AGACATGTGTTAGTGCAATTTGT 57.227 34.783 1.15 0.00 0.00 2.83
143 146 6.803320 CCTAAGACATGTGTTAGTGCAATTTG 59.197 38.462 30.26 15.54 35.42 2.32
144 147 6.490040 ACCTAAGACATGTGTTAGTGCAATTT 59.510 34.615 30.26 11.31 35.42 1.82
153 156 8.089597 TCGATGTTTAACCTAAGACATGTGTTA 58.910 33.333 14.16 14.16 33.21 2.41
159 162 7.664318 AGGTTTTCGATGTTTAACCTAAGACAT 59.336 33.333 12.06 0.00 46.34 3.06
167 170 6.068473 AGTCAAGGTTTTCGATGTTTAACC 57.932 37.500 0.00 0.00 40.22 2.85
177 180 5.851047 AAATACGGTAGTCAAGGTTTTCG 57.149 39.130 0.00 0.00 0.00 3.46
178 181 9.550811 CAAATAAATACGGTAGTCAAGGTTTTC 57.449 33.333 0.00 0.00 0.00 2.29
307 313 3.584848 CCCTATCCTCCTAACCCAATCAG 59.415 52.174 0.00 0.00 0.00 2.90
375 386 9.533253 CCTAAACAAATTCAAGAAAATGTGAGT 57.467 29.630 5.10 0.00 29.93 3.41
386 397 5.333263 CGCCAAAAGCCTAAACAAATTCAAG 60.333 40.000 0.00 0.00 38.78 3.02
395 406 2.124122 CACAACGCCAAAAGCCTAAAC 58.876 47.619 0.00 0.00 38.78 2.01
398 409 1.657556 GCACAACGCCAAAAGCCTA 59.342 52.632 0.00 0.00 38.78 3.93
399 410 2.417097 GCACAACGCCAAAAGCCT 59.583 55.556 0.00 0.00 38.78 4.58
400 411 3.029735 CGCACAACGCCAAAAGCC 61.030 61.111 0.00 0.00 38.78 4.35
411 422 1.821759 CCACCCACTGAACGCACAA 60.822 57.895 0.00 0.00 0.00 3.33
412 423 2.203139 CCACCCACTGAACGCACA 60.203 61.111 0.00 0.00 0.00 4.57
432 445 3.186047 CGTGGTCGATGGGAACGC 61.186 66.667 0.00 0.00 39.54 4.84
452 465 9.683069 GACATTGATGAAATAGTCACAAACTTT 57.317 29.630 0.00 0.00 39.72 2.66
453 466 8.849168 TGACATTGATGAAATAGTCACAAACTT 58.151 29.630 0.00 0.00 39.72 2.66
454 467 8.394971 TGACATTGATGAAATAGTCACAAACT 57.605 30.769 0.00 0.00 39.72 2.66
463 476 6.140786 CGCCATCTTGACATTGATGAAATAG 58.859 40.000 16.07 4.98 41.69 1.73
466 479 3.758023 ACGCCATCTTGACATTGATGAAA 59.242 39.130 16.07 0.00 41.69 2.69
476 489 1.324736 GAATCGACACGCCATCTTGAC 59.675 52.381 0.00 0.00 0.00 3.18
481 494 0.924090 GACTGAATCGACACGCCATC 59.076 55.000 0.00 0.00 0.00 3.51
485 498 1.651138 CAAGAGACTGAATCGACACGC 59.349 52.381 0.00 0.00 0.00 5.34
490 503 3.928992 GCACATTCAAGAGACTGAATCGA 59.071 43.478 0.00 0.00 42.79 3.59
493 506 4.458295 CCAAGCACATTCAAGAGACTGAAT 59.542 41.667 0.00 0.00 44.98 2.57
494 507 3.817084 CCAAGCACATTCAAGAGACTGAA 59.183 43.478 0.00 0.00 39.56 3.02
504 517 2.267351 CCCACGCCAAGCACATTCA 61.267 57.895 0.00 0.00 0.00 2.57
506 519 2.203480 ACCCACGCCAAGCACATT 60.203 55.556 0.00 0.00 0.00 2.71
509 522 1.674322 ATACACCCACGCCAAGCAC 60.674 57.895 0.00 0.00 0.00 4.40
514 527 2.359354 GCACATACACCCACGCCA 60.359 61.111 0.00 0.00 0.00 5.69
532 545 9.051027 CAAAGAGTAAATGTAATGTTAACGCAG 57.949 33.333 0.26 0.00 0.00 5.18
569 699 5.793817 TCACAGTGCTGAGTAATGTAATGT 58.206 37.500 2.90 0.00 0.00 2.71
570 700 6.726258 TTCACAGTGCTGAGTAATGTAATG 57.274 37.500 2.90 0.00 0.00 1.90
571 701 8.260818 AGTATTCACAGTGCTGAGTAATGTAAT 58.739 33.333 2.90 7.06 0.00 1.89
573 703 7.170393 AGTATTCACAGTGCTGAGTAATGTA 57.830 36.000 2.90 0.00 0.00 2.29
574 704 6.042638 AGTATTCACAGTGCTGAGTAATGT 57.957 37.500 6.17 0.00 0.00 2.71
575 705 6.699204 CCTAGTATTCACAGTGCTGAGTAATG 59.301 42.308 6.17 0.00 0.00 1.90
576 706 6.607600 TCCTAGTATTCACAGTGCTGAGTAAT 59.392 38.462 6.17 5.28 0.00 1.89
586 716 5.934402 AATTCGGTCCTAGTATTCACAGT 57.066 39.130 0.00 0.00 0.00 3.55
587 717 7.490000 AGTTAATTCGGTCCTAGTATTCACAG 58.510 38.462 0.00 0.00 0.00 3.66
591 721 9.374838 TGAAAAGTTAATTCGGTCCTAGTATTC 57.625 33.333 0.00 0.00 0.00 1.75
604 734 6.183360 GCCCCTGTATCCTGAAAAGTTAATTC 60.183 42.308 0.00 0.00 0.00 2.17
652 784 3.627577 CCTGTATGGCTGTATCGCTTTTT 59.372 43.478 0.00 0.00 0.00 1.94
654 786 2.485479 CCCTGTATGGCTGTATCGCTTT 60.485 50.000 0.00 0.00 0.00 3.51
655 787 1.070758 CCCTGTATGGCTGTATCGCTT 59.929 52.381 0.00 0.00 0.00 4.68
656 788 0.681733 CCCTGTATGGCTGTATCGCT 59.318 55.000 0.00 0.00 0.00 4.93
657 789 0.320771 CCCCTGTATGGCTGTATCGC 60.321 60.000 0.00 0.00 0.00 4.58
658 790 0.320771 GCCCCTGTATGGCTGTATCG 60.321 60.000 0.00 0.00 45.70 2.92
659 791 3.633361 GCCCCTGTATGGCTGTATC 57.367 57.895 0.00 0.00 45.70 2.24
694 1919 7.603180 AGAAAATTAATTTGGCCCTATCCTC 57.397 36.000 14.04 4.38 0.00 3.71
836 2064 3.528370 CACCGCCTCCTACCTCCG 61.528 72.222 0.00 0.00 0.00 4.63
1113 2351 2.762327 TCCCCCGAATACAGACAGTAAC 59.238 50.000 0.00 0.00 36.05 2.50
1200 2439 7.433719 CAGACCGAGTTAATCATTCTGTTCTAG 59.566 40.741 0.97 0.00 34.12 2.43
1337 2577 1.228337 AGCACTGCACAATGCCAGA 60.228 52.632 3.30 0.00 44.23 3.86
1361 2602 4.615961 CGTTACCACTTCAGTAGAAACTCG 59.384 45.833 0.00 0.00 31.97 4.18
1614 2867 4.275689 ACAAAATCGAACATGAGAACAGCA 59.724 37.500 0.00 0.00 0.00 4.41
1621 2874 8.955061 AATCTACAAACAAAATCGAACATGAG 57.045 30.769 0.00 0.00 0.00 2.90
1635 2888 9.616156 TTTGTTCCTAAGTGTAATCTACAAACA 57.384 29.630 0.00 0.00 40.93 2.83
1685 2938 9.695155 TTATCCCCTCTATTCCTTTTACAAAAG 57.305 33.333 7.35 7.35 43.82 2.27
1686 2939 9.695155 CTTATCCCCTCTATTCCTTTTACAAAA 57.305 33.333 0.00 0.00 0.00 2.44
1687 2940 8.279361 CCTTATCCCCTCTATTCCTTTTACAAA 58.721 37.037 0.00 0.00 0.00 2.83
1688 2941 7.407918 ACCTTATCCCCTCTATTCCTTTTACAA 59.592 37.037 0.00 0.00 0.00 2.41
1689 2942 6.912561 ACCTTATCCCCTCTATTCCTTTTACA 59.087 38.462 0.00 0.00 0.00 2.41
1690 2943 7.225011 CACCTTATCCCCTCTATTCCTTTTAC 58.775 42.308 0.00 0.00 0.00 2.01
1691 2944 6.331837 CCACCTTATCCCCTCTATTCCTTTTA 59.668 42.308 0.00 0.00 0.00 1.52
1692 2945 5.134509 CCACCTTATCCCCTCTATTCCTTTT 59.865 44.000 0.00 0.00 0.00 2.27
1693 2946 4.665483 CCACCTTATCCCCTCTATTCCTTT 59.335 45.833 0.00 0.00 0.00 3.11
1694 2947 4.077387 TCCACCTTATCCCCTCTATTCCTT 60.077 45.833 0.00 0.00 0.00 3.36
1695 2948 3.475174 TCCACCTTATCCCCTCTATTCCT 59.525 47.826 0.00 0.00 0.00 3.36
1696 2949 3.870559 TCCACCTTATCCCCTCTATTCC 58.129 50.000 0.00 0.00 0.00 3.01
1697 2950 5.337652 CGAATCCACCTTATCCCCTCTATTC 60.338 48.000 0.00 0.00 0.00 1.75
1698 2951 4.532521 CGAATCCACCTTATCCCCTCTATT 59.467 45.833 0.00 0.00 0.00 1.73
1699 2952 4.097418 CGAATCCACCTTATCCCCTCTAT 58.903 47.826 0.00 0.00 0.00 1.98
1700 2953 3.116862 ACGAATCCACCTTATCCCCTCTA 60.117 47.826 0.00 0.00 0.00 2.43
1710 2963 4.320935 GCAATACAACAACGAATCCACCTT 60.321 41.667 0.00 0.00 0.00 3.50
1711 2964 3.190535 GCAATACAACAACGAATCCACCT 59.809 43.478 0.00 0.00 0.00 4.00
1720 2973 3.483574 CGAGGCTAAGCAATACAACAACG 60.484 47.826 0.00 0.00 0.00 4.10
1725 2978 2.627945 CCACGAGGCTAAGCAATACAA 58.372 47.619 0.00 0.00 0.00 2.41
1818 3079 7.228706 GGGGATGTTGAGTATCGTGATTATTTT 59.771 37.037 0.00 0.00 38.61 1.82
1852 3117 2.864343 CGGATTATTCTCCACCGTTGTC 59.136 50.000 0.00 0.00 38.97 3.18
1906 3201 2.588877 CCCGATGCATCCACCGTC 60.589 66.667 20.87 0.00 0.00 4.79
1912 3207 1.595382 CGACTTCCCCGATGCATCC 60.595 63.158 20.87 3.32 0.00 3.51
1922 3218 1.026718 CAATCCAGCCACGACTTCCC 61.027 60.000 0.00 0.00 0.00 3.97
2008 3305 2.434884 CACGGCTACAGCACCCTG 60.435 66.667 3.24 0.00 44.36 4.45
2015 3312 1.028330 TACCTCGACCACGGCTACAG 61.028 60.000 0.00 0.00 40.21 2.74
2077 3375 2.674958 GGGGACTACCTCGAAACCA 58.325 57.895 0.00 0.00 40.03 3.67
2149 3527 0.888619 CTCACCTACTTCGAGCACCA 59.111 55.000 0.00 0.00 0.00 4.17
2201 3579 4.814294 GCGGGAATGTCGCCGTCT 62.814 66.667 0.00 0.00 46.55 4.18
2207 3585 2.658593 CTAGGCGCGGGAATGTCG 60.659 66.667 8.83 0.00 0.00 4.35
2262 3645 4.657824 CCACTTCGCCGTCCACGT 62.658 66.667 0.00 0.00 37.74 4.49
2638 4106 9.494271 GAGTATCATGATTATTAGGAAACAGCA 57.506 33.333 14.65 0.00 33.17 4.41
2704 4172 6.001460 AGCAATTAACTACTACAGCAAACCA 58.999 36.000 0.00 0.00 0.00 3.67
2719 4187 9.855021 ATAACTTGAAATGGTGTAGCAATTAAC 57.145 29.630 0.00 0.00 0.00 2.01
2788 4260 1.281577 TGGCACCATGTTGATGCTCTA 59.718 47.619 0.00 0.00 37.00 2.43
2906 4428 3.947868 ACCAATGAGGACTCAAGTGATG 58.052 45.455 6.06 1.78 43.58 3.07
2907 4429 4.647564 AACCAATGAGGACTCAAGTGAT 57.352 40.909 6.06 0.00 43.58 3.06
2908 4430 5.551233 CTTAACCAATGAGGACTCAAGTGA 58.449 41.667 6.06 0.00 43.58 3.41
2909 4431 4.154918 GCTTAACCAATGAGGACTCAAGTG 59.845 45.833 6.06 7.59 43.58 3.16
2910 4432 4.202461 TGCTTAACCAATGAGGACTCAAGT 60.202 41.667 6.06 2.09 43.58 3.16
2911 4433 4.326826 TGCTTAACCAATGAGGACTCAAG 58.673 43.478 6.06 2.51 43.58 3.02
2912 4434 4.365514 TGCTTAACCAATGAGGACTCAA 57.634 40.909 6.06 0.00 43.58 3.02
2913 4435 4.574674 ATGCTTAACCAATGAGGACTCA 57.425 40.909 4.26 4.26 44.59 3.41
2914 4436 4.439289 GCAATGCTTAACCAATGAGGACTC 60.439 45.833 0.00 0.00 41.22 3.36
2915 4437 3.445096 GCAATGCTTAACCAATGAGGACT 59.555 43.478 0.00 0.00 41.22 3.85
3206 4730 9.173939 GAATTATTGATGAAACATAAAGGCTCG 57.826 33.333 0.00 0.00 0.00 5.03
3295 4858 0.884704 AACTGCGCACAGGTAACAGG 60.885 55.000 5.66 0.00 43.97 4.00
3304 4867 3.058983 GCTGCATATATAAACTGCGCACA 60.059 43.478 5.66 0.00 38.75 4.57
3584 5159 6.832520 ACTATGAATTATGGTGTGCAAACA 57.167 33.333 9.76 0.00 0.00 2.83
3611 5186 2.512705 GGCTAGGCTACGTGTATACCT 58.487 52.381 9.46 0.00 34.42 3.08
3621 5196 0.248539 CGAACAGACGGCTAGGCTAC 60.249 60.000 15.11 8.00 34.57 3.58
3675 5293 7.417612 CGCTGCCTATCATTATTAACAAAGTT 58.582 34.615 0.00 0.00 0.00 2.66
3700 5318 7.112452 ACAATCAAGGGAATAATAAGGTTGC 57.888 36.000 0.00 0.00 0.00 4.17
3832 5450 6.442952 ACTAGAAGAGAGCATATAAAGCACG 58.557 40.000 0.00 0.00 0.00 5.34
3896 5514 5.358922 TCCCCGTTTTAGGTTATTCATACG 58.641 41.667 0.00 0.00 0.00 3.06
4045 5664 7.572523 TGTGATGATTTTCATAACCAGGATC 57.427 36.000 0.00 0.00 37.42 3.36
4046 5665 7.616935 AGTTGTGATGATTTTCATAACCAGGAT 59.383 33.333 9.51 0.00 44.28 3.24
4067 5686 1.414919 TGTTGCGAGAGGGTTAGTTGT 59.585 47.619 0.00 0.00 0.00 3.32
4096 5715 6.234177 AGCTGCTACATAGGCCTAAAATTAG 58.766 40.000 18.42 14.72 0.00 1.73
4256 5877 2.256117 ACCTTAGCTCAAAACTGCGT 57.744 45.000 0.00 0.00 0.00 5.24
4274 5895 7.431376 GCAGTTTTGAACTAAGGTTGAACTAAC 59.569 37.037 0.00 0.00 40.46 2.34
4275 5896 7.415877 GGCAGTTTTGAACTAAGGTTGAACTAA 60.416 37.037 0.00 0.00 40.46 2.24
4276 5897 6.038936 GGCAGTTTTGAACTAAGGTTGAACTA 59.961 38.462 0.00 0.00 40.46 2.24
4277 5898 5.163550 GGCAGTTTTGAACTAAGGTTGAACT 60.164 40.000 0.00 0.00 40.46 3.01
4278 5899 5.041287 GGCAGTTTTGAACTAAGGTTGAAC 58.959 41.667 0.00 0.00 40.46 3.18
4279 5900 4.707448 TGGCAGTTTTGAACTAAGGTTGAA 59.293 37.500 0.00 0.00 40.46 2.69
4280 5901 4.097286 GTGGCAGTTTTGAACTAAGGTTGA 59.903 41.667 0.00 0.00 40.46 3.18
4281 5902 4.142271 TGTGGCAGTTTTGAACTAAGGTTG 60.142 41.667 0.00 0.00 40.46 3.77
4282 5903 4.020543 TGTGGCAGTTTTGAACTAAGGTT 58.979 39.130 0.00 0.00 40.46 3.50
4283 5904 3.380320 GTGTGGCAGTTTTGAACTAAGGT 59.620 43.478 0.00 0.00 40.46 3.50
4284 5905 3.632145 AGTGTGGCAGTTTTGAACTAAGG 59.368 43.478 0.00 0.00 40.46 2.69
4285 5906 4.900635 AGTGTGGCAGTTTTGAACTAAG 57.099 40.909 0.00 0.00 40.46 2.18
4286 5907 6.952773 ATAAGTGTGGCAGTTTTGAACTAA 57.047 33.333 0.00 0.00 40.46 2.24
4287 5908 6.320164 ACAATAAGTGTGGCAGTTTTGAACTA 59.680 34.615 0.00 0.00 38.32 2.24
4288 5909 5.127031 ACAATAAGTGTGGCAGTTTTGAACT 59.873 36.000 0.00 0.00 40.09 3.01
4289 5910 5.348164 ACAATAAGTGTGGCAGTTTTGAAC 58.652 37.500 0.00 0.00 39.72 3.18
4290 5911 5.590530 ACAATAAGTGTGGCAGTTTTGAA 57.409 34.783 0.00 0.00 39.72 2.69
4311 5932 2.296073 AGATACTCCCTCCGATCCAC 57.704 55.000 0.00 0.00 0.00 4.02
4377 6741 4.219115 GGAGAGAGAGAGAGAGAGAGAGA 58.781 52.174 0.00 0.00 0.00 3.10
4385 6749 1.286553 GGTTGGGGAGAGAGAGAGAGA 59.713 57.143 0.00 0.00 0.00 3.10
4399 6789 1.303643 GAGGCTTGGTCTGGTTGGG 60.304 63.158 0.00 0.00 0.00 4.12
4489 6879 5.596361 TCTTCCTTTTGGTGCTTTTATGACA 59.404 36.000 0.00 0.00 41.38 3.58
4494 6884 4.735283 GCGTTCTTCCTTTTGGTGCTTTTA 60.735 41.667 0.00 0.00 41.38 1.52
4640 7030 6.464895 TTTCACACAAAAGCAACTTCAAAG 57.535 33.333 0.00 0.00 0.00 2.77
4660 7050 5.175388 ACACATAGGTCCCCTACTTTTTC 57.825 43.478 0.00 0.00 39.10 2.29
4721 7113 6.040842 GGGCATGCTATGGAAAGAAATAAGAA 59.959 38.462 18.92 0.00 0.00 2.52
4722 7114 5.536161 GGGCATGCTATGGAAAGAAATAAGA 59.464 40.000 18.92 0.00 0.00 2.10
4726 7118 3.919834 AGGGCATGCTATGGAAAGAAAT 58.080 40.909 18.92 0.00 0.00 2.17
4729 7121 3.386932 AAAGGGCATGCTATGGAAAGA 57.613 42.857 18.92 0.00 0.00 2.52
4775 7167 5.537188 TGCATATGTTTTGAACAGGAAACC 58.463 37.500 4.29 0.00 45.95 3.27
5046 7448 6.815641 CACAAGAATGTCTAGCAGTTAGATGT 59.184 38.462 0.00 0.00 40.42 3.06
5092 7494 6.134040 AGCCTATAGAGAAACAACGAGTAC 57.866 41.667 0.00 0.00 0.00 2.73
5147 7549 5.196341 ACAGAATATGATTGGCATGCAAG 57.804 39.130 21.36 0.00 37.87 4.01
5151 7553 7.034685 TCAAGAACAGAATATGATTGGCATG 57.965 36.000 0.00 0.00 37.87 4.06
5343 7749 7.993183 CCATATACACTAAGTGAAAGGGAACAT 59.007 37.037 0.00 0.00 36.96 2.71
5670 8103 3.408634 TGGACGAAAGAGAAAACCCATC 58.591 45.455 0.00 0.00 0.00 3.51
5674 8107 6.270064 TCAATTTTGGACGAAAGAGAAAACC 58.730 36.000 0.00 0.00 0.00 3.27
5801 8238 6.099845 GGATTCCAATGTACTCCCTCTAAAGA 59.900 42.308 0.00 0.00 0.00 2.52
5802 8239 6.126768 TGGATTCCAATGTACTCCCTCTAAAG 60.127 42.308 1.94 0.00 0.00 1.85
5804 8241 5.285401 TGGATTCCAATGTACTCCCTCTAA 58.715 41.667 1.94 0.00 0.00 2.10
5807 8244 4.503714 TTGGATTCCAATGTACTCCCTC 57.496 45.455 14.24 0.00 38.75 4.30
5808 8245 4.946160 TTTGGATTCCAATGTACTCCCT 57.054 40.909 18.62 0.00 43.55 4.20
5809 8246 5.069119 GGATTTTGGATTCCAATGTACTCCC 59.931 44.000 18.62 9.52 43.55 4.30
5811 8248 6.238484 CGAGGATTTTGGATTCCAATGTACTC 60.238 42.308 18.62 20.61 43.55 2.59
5812 8249 5.590259 CGAGGATTTTGGATTCCAATGTACT 59.410 40.000 18.62 15.23 43.55 2.73
5813 8250 5.357032 ACGAGGATTTTGGATTCCAATGTAC 59.643 40.000 18.62 11.04 43.55 2.90
5814 8251 5.505780 ACGAGGATTTTGGATTCCAATGTA 58.494 37.500 18.62 8.17 43.55 2.29
5948 8390 2.239654 CAGAAGGAAGGAATAGCACCCA 59.760 50.000 0.00 0.00 0.00 4.51
6026 8468 8.814038 ATAGGTAAATGCTTCAAACTCATTCT 57.186 30.769 0.00 0.00 30.84 2.40
6046 8488 5.338381 CCGGTATGCAATATGGAAGATAGGT 60.338 44.000 0.00 0.00 31.10 3.08
6068 8510 2.332063 ATCCTGCCACTGTTTATCCG 57.668 50.000 0.00 0.00 0.00 4.18
6070 8512 4.265073 AGACAATCCTGCCACTGTTTATC 58.735 43.478 0.00 0.00 0.00 1.75
6106 8548 1.372128 GCGCCAAACAGAAAGCCAG 60.372 57.895 0.00 0.00 0.00 4.85
6192 8634 3.314693 TGTGAAACTAGGAGACAGGGTT 58.685 45.455 0.00 0.00 38.04 4.11
6194 8636 5.878406 ATATGTGAAACTAGGAGACAGGG 57.122 43.478 0.00 0.00 38.04 4.45
6221 8663 6.466097 GCATTTTGACTAAGAAGCATACGAAC 59.534 38.462 0.00 0.00 0.00 3.95
6273 8873 8.575589 TGTATATGGTGCCTGCATTTAATAAAG 58.424 33.333 0.00 0.00 0.00 1.85
6398 8998 7.884354 AGGGTAAAATTAACACGAAGTATTGGA 59.116 33.333 0.00 0.00 41.61 3.53
6409 9009 8.336801 ACTGATCTTGAGGGTAAAATTAACAC 57.663 34.615 0.00 0.00 0.00 3.32
6410 9010 9.667107 CTACTGATCTTGAGGGTAAAATTAACA 57.333 33.333 0.00 0.00 0.00 2.41
6420 9020 5.529289 TGGTTATCTACTGATCTTGAGGGT 58.471 41.667 0.00 0.00 34.32 4.34
6429 9029 9.388506 CAGAAGTTGATTTGGTTATCTACTGAT 57.611 33.333 0.00 0.00 38.88 2.90
6436 9036 7.148239 CCCTGTACAGAAGTTGATTTGGTTATC 60.148 40.741 24.68 0.00 0.00 1.75
6568 9168 9.013229 TGCTGACATAAGAAGAACAATTACAAT 57.987 29.630 0.00 0.00 0.00 2.71
6569 9169 8.289618 GTGCTGACATAAGAAGAACAATTACAA 58.710 33.333 0.00 0.00 0.00 2.41
6570 9170 7.360017 CGTGCTGACATAAGAAGAACAATTACA 60.360 37.037 0.00 0.00 0.00 2.41
6571 9171 6.955963 CGTGCTGACATAAGAAGAACAATTAC 59.044 38.462 0.00 0.00 0.00 1.89
6572 9172 6.871492 TCGTGCTGACATAAGAAGAACAATTA 59.129 34.615 0.00 0.00 0.00 1.40
6593 9193 7.962964 AAATAACCCATGTGATACTATCGTG 57.037 36.000 0.00 0.00 0.00 4.35
6616 9216 7.346695 GTTTATGATATTGCGCGGTAGTAAAA 58.653 34.615 8.83 0.00 0.00 1.52
6628 9228 7.119846 CAGGTAGGCTAAGGTTTATGATATTGC 59.880 40.741 0.00 0.00 0.00 3.56
6636 9236 6.886178 TTTCTCAGGTAGGCTAAGGTTTAT 57.114 37.500 0.00 0.00 0.00 1.40
6681 9281 6.183309 AGCAAAGAATTAGCCTTTAGTTCG 57.817 37.500 0.00 0.00 33.03 3.95
6938 9541 5.551233 ACTACAGAAGCTGAATGTTAGCAA 58.449 37.500 0.82 0.00 43.53 3.91
6939 9542 5.152623 ACTACAGAAGCTGAATGTTAGCA 57.847 39.130 0.82 0.00 43.53 3.49
6951 9554 7.224753 TGCAGCAATTATTAGTACTACAGAAGC 59.775 37.037 0.91 3.48 0.00 3.86
6952 9555 8.648557 TGCAGCAATTATTAGTACTACAGAAG 57.351 34.615 0.91 0.00 0.00 2.85
6953 9556 9.045223 CATGCAGCAATTATTAGTACTACAGAA 57.955 33.333 0.91 0.00 0.00 3.02
6996 9631 8.207545 AGAGAAGATAGTAATCAAACATCCCAC 58.792 37.037 0.00 0.00 34.28 4.61
7336 9974 7.889469 AGAATGACAGAATTTACACAAATGCT 58.111 30.769 0.00 0.00 40.18 3.79
7345 9983 9.102757 TGCTCAATCTAGAATGACAGAATTTAC 57.897 33.333 6.39 0.00 0.00 2.01
7352 9990 7.215789 AGGTAATGCTCAATCTAGAATGACAG 58.784 38.462 6.39 0.00 0.00 3.51
7393 10031 0.461961 ATCTCAGCGTAACCAGCTCC 59.538 55.000 0.00 0.00 44.06 4.70
7415 10053 4.269183 TCAAGCACTTTCAACTCCTTTGA 58.731 39.130 0.00 0.00 42.83 2.69
7545 10191 8.592998 GTTCGATATGTTAGTGAACCAAGTAAG 58.407 37.037 0.00 0.00 34.35 2.34
7608 10254 3.374042 TTTGGGAAGTTCAGTCACCAA 57.626 42.857 5.01 5.87 36.30 3.67
7719 10368 3.192422 AGCCATGTATACTCGATGCTCTC 59.808 47.826 4.17 0.00 0.00 3.20
7755 10404 1.281419 TCCGGCCACCTAGAATTCAA 58.719 50.000 8.44 0.00 0.00 2.69
7846 10495 4.148838 AGCGCTTCTGAGGATCTACTATT 58.851 43.478 2.64 0.00 34.92 1.73
7879 10528 7.811117 AAACAATTACTAACTAGTGCAACCA 57.189 32.000 0.00 0.00 37.80 3.67
7900 10549 8.785468 TTAAGAATTGCTAACGGTACAAAAAC 57.215 30.769 0.00 0.00 0.00 2.43
8063 10712 2.787994 AGAGCTGAAATTGGACTGGTG 58.212 47.619 0.00 0.00 0.00 4.17
8108 10763 2.024176 ACCGCCAGCACATTACTTAG 57.976 50.000 0.00 0.00 0.00 2.18
8126 10781 5.116074 CGAGAACAAGAAAATCACATGCAAC 59.884 40.000 0.00 0.00 0.00 4.17
8151 10806 4.256920 ACAAGGAATTTCAGACATCCGAG 58.743 43.478 0.00 0.00 37.05 4.63
8169 10824 4.710375 ACTACAGACTGGTACCCATACAAG 59.290 45.833 10.07 0.80 38.23 3.16
8176 10831 3.181489 CGAATGACTACAGACTGGTACCC 60.181 52.174 10.07 0.00 0.00 3.69
8188 10843 0.305922 GCCATGCAGCGAATGACTAC 59.694 55.000 0.00 0.00 0.00 2.73
8193 10848 2.411701 CCAGCCATGCAGCGAATG 59.588 61.111 0.00 0.00 38.01 2.67
8198 10853 0.179092 GATTTTCCCAGCCATGCAGC 60.179 55.000 0.00 0.00 0.00 5.25
8230 10885 1.059098 ACCAAGCACACTCATGGAGA 58.941 50.000 0.00 0.00 36.75 3.71
8231 10886 1.901591 AACCAAGCACACTCATGGAG 58.098 50.000 0.00 0.00 36.75 3.86
8232 10887 2.363306 AAACCAAGCACACTCATGGA 57.637 45.000 0.00 0.00 36.75 3.41
8233 10888 2.095059 GCTAAACCAAGCACACTCATGG 60.095 50.000 0.00 0.00 42.30 3.66
8234 10889 2.095059 GGCTAAACCAAGCACACTCATG 60.095 50.000 0.00 0.00 44.64 3.07
8235 10890 2.162681 GGCTAAACCAAGCACACTCAT 58.837 47.619 0.00 0.00 44.64 2.90
8236 10891 1.604604 GGCTAAACCAAGCACACTCA 58.395 50.000 0.00 0.00 44.64 3.41
8237 10892 0.517316 CGGCTAAACCAAGCACACTC 59.483 55.000 0.00 0.00 44.64 3.51
8238 10893 0.179029 ACGGCTAAACCAAGCACACT 60.179 50.000 0.00 0.00 44.64 3.55
8239 10894 0.040425 CACGGCTAAACCAAGCACAC 60.040 55.000 0.00 0.00 44.64 3.82
8240 10895 1.169661 CCACGGCTAAACCAAGCACA 61.170 55.000 0.00 0.00 44.64 4.57
8241 10896 1.579429 CCACGGCTAAACCAAGCAC 59.421 57.895 0.00 0.00 44.64 4.40
8242 10897 2.265182 GCCACGGCTAAACCAAGCA 61.265 57.895 0.00 0.00 44.64 3.91
8243 10898 2.566529 GCCACGGCTAAACCAAGC 59.433 61.111 0.00 0.00 41.99 4.01
8244 10899 2.867472 CGCCACGGCTAAACCAAG 59.133 61.111 6.48 0.00 39.03 3.61
8245 10900 3.358707 GCGCCACGGCTAAACCAA 61.359 61.111 6.48 0.00 39.03 3.67
8256 10911 2.473984 GGACAACTATTATACGCGCCAC 59.526 50.000 5.73 0.00 0.00 5.01
8257 10912 2.546373 GGGACAACTATTATACGCGCCA 60.546 50.000 5.73 0.00 0.00 5.69
8258 10913 2.064014 GGGACAACTATTATACGCGCC 58.936 52.381 5.73 0.00 0.00 6.53
8259 10914 2.064014 GGGGACAACTATTATACGCGC 58.936 52.381 5.73 0.00 0.00 6.86
8260 10915 2.030893 TCGGGGACAACTATTATACGCG 60.031 50.000 3.53 3.53 0.00 6.01
8261 10916 3.648339 TCGGGGACAACTATTATACGC 57.352 47.619 0.00 0.00 0.00 4.42
8262 10917 5.192327 AGTTCGGGGACAACTATTATACG 57.808 43.478 0.00 0.00 32.42 3.06
8263 10918 6.576185 TCAAGTTCGGGGACAACTATTATAC 58.424 40.000 0.00 0.00 33.36 1.47
8264 10919 6.608405 TCTCAAGTTCGGGGACAACTATTATA 59.392 38.462 0.00 0.00 33.36 0.98
8265 10920 5.424252 TCTCAAGTTCGGGGACAACTATTAT 59.576 40.000 0.00 0.00 33.36 1.28
8266 10921 4.773674 TCTCAAGTTCGGGGACAACTATTA 59.226 41.667 0.00 0.00 33.36 0.98
8267 10922 3.581332 TCTCAAGTTCGGGGACAACTATT 59.419 43.478 0.00 0.00 33.36 1.73
8268 10923 3.170717 TCTCAAGTTCGGGGACAACTAT 58.829 45.455 0.00 0.00 33.36 2.12
8269 10924 2.600790 TCTCAAGTTCGGGGACAACTA 58.399 47.619 0.00 0.00 33.36 2.24
8270 10925 1.420430 TCTCAAGTTCGGGGACAACT 58.580 50.000 0.00 0.00 34.56 3.16
8271 10926 2.249844 TTCTCAAGTTCGGGGACAAC 57.750 50.000 0.00 0.00 0.00 3.32
8272 10927 3.146066 CATTTCTCAAGTTCGGGGACAA 58.854 45.455 0.00 0.00 0.00 3.18
8273 10928 2.778299 CATTTCTCAAGTTCGGGGACA 58.222 47.619 0.00 0.00 0.00 4.02
8274 10929 1.468914 GCATTTCTCAAGTTCGGGGAC 59.531 52.381 0.00 0.00 0.00 4.46
8275 10930 1.351017 AGCATTTCTCAAGTTCGGGGA 59.649 47.619 0.00 0.00 0.00 4.81
8276 10931 1.740025 GAGCATTTCTCAAGTTCGGGG 59.260 52.381 0.00 0.00 41.51 5.73
8277 10932 1.740025 GGAGCATTTCTCAAGTTCGGG 59.260 52.381 0.00 0.00 43.70 5.14
8278 10933 2.426522 TGGAGCATTTCTCAAGTTCGG 58.573 47.619 0.00 0.00 43.70 4.30
8279 10934 4.691860 ATTGGAGCATTTCTCAAGTTCG 57.308 40.909 0.00 0.00 43.70 3.95
8280 10935 7.383102 TCTTATTGGAGCATTTCTCAAGTTC 57.617 36.000 0.00 0.00 43.70 3.01
8281 10936 7.067981 GGATCTTATTGGAGCATTTCTCAAGTT 59.932 37.037 0.00 0.00 43.70 2.66
8282 10937 6.545298 GGATCTTATTGGAGCATTTCTCAAGT 59.455 38.462 0.00 0.00 43.70 3.16
8283 10938 6.771749 AGGATCTTATTGGAGCATTTCTCAAG 59.228 38.462 0.00 0.00 43.70 3.02
8284 10939 6.544931 CAGGATCTTATTGGAGCATTTCTCAA 59.455 38.462 0.00 0.00 43.70 3.02
8285 10940 6.060136 CAGGATCTTATTGGAGCATTTCTCA 58.940 40.000 0.00 0.00 43.70 3.27
8286 10941 5.472820 CCAGGATCTTATTGGAGCATTTCTC 59.527 44.000 0.00 0.00 41.15 2.87
8287 10942 5.133322 TCCAGGATCTTATTGGAGCATTTCT 59.867 40.000 0.00 0.00 36.13 2.52
8288 10943 5.380043 TCCAGGATCTTATTGGAGCATTTC 58.620 41.667 0.00 0.00 36.13 2.17
8289 10944 5.393068 TCCAGGATCTTATTGGAGCATTT 57.607 39.130 0.00 0.00 36.13 2.32
8290 10945 5.393068 TTCCAGGATCTTATTGGAGCATT 57.607 39.130 0.00 0.00 41.68 3.56
8291 10946 5.163012 ACATTCCAGGATCTTATTGGAGCAT 60.163 40.000 0.00 0.00 41.68 3.79
8292 10947 4.166725 ACATTCCAGGATCTTATTGGAGCA 59.833 41.667 0.00 0.00 41.68 4.26
8293 10948 4.518211 CACATTCCAGGATCTTATTGGAGC 59.482 45.833 0.00 0.00 41.68 4.70
8294 10949 5.933617 TCACATTCCAGGATCTTATTGGAG 58.066 41.667 0.00 0.00 41.68 3.86
8295 10950 5.974156 TCACATTCCAGGATCTTATTGGA 57.026 39.130 0.00 0.00 39.16 3.53
8296 10951 7.093814 TGTTTTCACATTCCAGGATCTTATTGG 60.094 37.037 0.00 0.00 0.00 3.16
8297 10952 7.829725 TGTTTTCACATTCCAGGATCTTATTG 58.170 34.615 0.00 0.00 0.00 1.90
8298 10953 8.472413 CATGTTTTCACATTCCAGGATCTTATT 58.528 33.333 0.00 0.00 41.16 1.40
8299 10954 7.069085 CCATGTTTTCACATTCCAGGATCTTAT 59.931 37.037 0.00 0.00 41.16 1.73
8300 10955 6.377996 CCATGTTTTCACATTCCAGGATCTTA 59.622 38.462 0.00 0.00 41.16 2.10
8301 10956 5.186409 CCATGTTTTCACATTCCAGGATCTT 59.814 40.000 0.00 0.00 41.16 2.40
8302 10957 4.708421 CCATGTTTTCACATTCCAGGATCT 59.292 41.667 0.00 0.00 41.16 2.75
8303 10958 4.142093 CCCATGTTTTCACATTCCAGGATC 60.142 45.833 0.00 0.00 41.16 3.36
8304 10959 3.770933 CCCATGTTTTCACATTCCAGGAT 59.229 43.478 0.00 0.00 41.16 3.24
8305 10960 3.164268 CCCATGTTTTCACATTCCAGGA 58.836 45.455 0.00 0.00 41.16 3.86
8306 10961 2.354003 GCCCATGTTTTCACATTCCAGG 60.354 50.000 0.00 0.00 41.16 4.45
8307 10962 2.564062 AGCCCATGTTTTCACATTCCAG 59.436 45.455 0.00 0.00 41.16 3.86
8308 10963 2.607499 AGCCCATGTTTTCACATTCCA 58.393 42.857 0.00 0.00 41.16 3.53
8309 10964 3.683365 AAGCCCATGTTTTCACATTCC 57.317 42.857 0.00 0.00 41.16 3.01
8310 10965 3.187022 GCAAAGCCCATGTTTTCACATTC 59.813 43.478 0.00 0.00 41.16 2.67
8311 10966 3.140623 GCAAAGCCCATGTTTTCACATT 58.859 40.909 0.00 0.00 41.16 2.71
8312 10967 2.550639 GGCAAAGCCCATGTTTTCACAT 60.551 45.455 0.00 0.00 44.06 3.21
8313 10968 1.202627 GGCAAAGCCCATGTTTTCACA 60.203 47.619 0.00 0.00 44.06 3.58
8314 10969 1.511850 GGCAAAGCCCATGTTTTCAC 58.488 50.000 0.00 0.00 44.06 3.18
8362 11017 4.689549 TCCCCCGAGTCGCCTCAA 62.690 66.667 7.12 0.00 37.59 3.02
8363 11018 4.689549 TTCCCCCGAGTCGCCTCA 62.690 66.667 7.12 0.00 37.59 3.86
8396 11088 4.074526 GCGCACTCCTCTGGCAGA 62.075 66.667 17.68 17.68 0.00 4.26
8429 11121 2.435938 GCCGCCACCTTCATCGAA 60.436 61.111 0.00 0.00 0.00 3.71
8430 11122 4.812476 CGCCGCCACCTTCATCGA 62.812 66.667 0.00 0.00 0.00 3.59
8455 11147 4.170062 CGCAATGTGGAGCTGCCG 62.170 66.667 1.53 0.00 40.66 5.69
8500 11192 4.021925 GCACTCTCCGCCCAAGGT 62.022 66.667 0.00 0.00 0.00 3.50
8544 11237 1.816863 GCTCCTCACCAACTCCGACA 61.817 60.000 0.00 0.00 0.00 4.35
8546 11239 2.283529 GGCTCCTCACCAACTCCGA 61.284 63.158 0.00 0.00 0.00 4.55
8675 11368 0.827368 GATCTGGCGAAGGAAGGAGT 59.173 55.000 0.00 0.00 0.00 3.85
8684 11377 2.577020 TAGGACCCGGATCTGGCGAA 62.577 60.000 15.84 0.00 0.00 4.70
8690 11383 1.457831 GCCACTAGGACCCGGATCT 60.458 63.158 0.73 0.00 36.89 2.75
8731 11424 2.472059 GATGAAATCCGCGCAGCCA 61.472 57.895 8.75 0.00 43.14 4.75
8735 11428 1.153647 ACTCGATGAAATCCGCGCA 60.154 52.632 8.75 0.00 41.39 6.09
8744 11437 1.285280 ATCCAACCCCACTCGATGAA 58.715 50.000 0.00 0.00 0.00 2.57
8747 11440 0.178068 CGAATCCAACCCCACTCGAT 59.822 55.000 0.00 0.00 0.00 3.59
8784 11477 4.373116 CCTACGGTGTGGCTGCGT 62.373 66.667 0.00 0.00 0.00 5.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.