Multiple sequence alignment - TraesCS2B01G245100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G245100 | chr2B | 100.000 | 4168 | 0 | 0 | 1 | 4168 | 249261706 | 249265873 | 0.000000e+00 | 7697 |
1 | TraesCS2B01G245100 | chr2A | 90.721 | 2759 | 119 | 50 | 1479 | 4168 | 207053842 | 207056532 | 0.000000e+00 | 3550 |
2 | TraesCS2B01G245100 | chr2A | 90.334 | 1407 | 77 | 27 | 1 | 1387 | 207052433 | 207053800 | 0.000000e+00 | 1790 |
3 | TraesCS2B01G245100 | chr2D | 90.295 | 2545 | 110 | 54 | 1693 | 4168 | 193118446 | 193120922 | 0.000000e+00 | 3205 |
4 | TraesCS2B01G245100 | chr2D | 91.366 | 1413 | 48 | 26 | 1 | 1387 | 193116850 | 193118214 | 0.000000e+00 | 1866 |
5 | TraesCS2B01G245100 | chr2D | 94.241 | 191 | 6 | 2 | 1479 | 1664 | 193118255 | 193118445 | 1.900000e-73 | 287 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G245100 | chr2B | 249261706 | 249265873 | 4167 | False | 7697 | 7697 | 100.000000 | 1 | 4168 | 1 | chr2B.!!$F1 | 4167 |
1 | TraesCS2B01G245100 | chr2A | 207052433 | 207056532 | 4099 | False | 2670 | 3550 | 90.527500 | 1 | 4168 | 2 | chr2A.!!$F1 | 4167 |
2 | TraesCS2B01G245100 | chr2D | 193116850 | 193120922 | 4072 | False | 1786 | 3205 | 91.967333 | 1 | 4168 | 3 | chr2D.!!$F1 | 4167 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
505 | 535 | 0.036306 | GTCCCCTTTCGGTCATGTGT | 59.964 | 55.0 | 0.00 | 0.00 | 0.00 | 3.72 | F |
821 | 851 | 0.179062 | ATGGTGCACTAGCTAGCTGC | 60.179 | 55.0 | 27.68 | 27.44 | 42.74 | 5.25 | F |
1835 | 1903 | 0.034476 | ATGCATCCGCGACATCATCT | 59.966 | 50.0 | 8.23 | 0.00 | 42.97 | 2.90 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1820 | 1888 | 0.319040 | CCGAAGATGATGTCGCGGAT | 60.319 | 55.0 | 6.13 | 0.0 | 46.03 | 4.18 | R |
2740 | 2815 | 0.179156 | GATCACGCCCTGCATGTTTG | 60.179 | 55.0 | 0.00 | 0.0 | 0.00 | 2.93 | R |
3445 | 3589 | 0.615331 | AACGGCACCTGATCTGATGT | 59.385 | 50.0 | 0.38 | 0.0 | 0.00 | 3.06 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
29 | 30 | 9.462606 | AGATAAAACCAACCCTATAAGAACTTG | 57.537 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
40 | 41 | 9.755122 | ACCCTATAAGAACTTGCTTAAAAAGAT | 57.245 | 29.630 | 4.91 | 0.00 | 34.33 | 2.40 |
102 | 103 | 0.901827 | TTCTTCTGCATCTACCGCCA | 59.098 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
171 | 192 | 3.222603 | ACCCAGTAGTTTGAAAAGGCAG | 58.777 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
185 | 206 | 2.372690 | GGCAGTGTACTGTGTCGCG | 61.373 | 63.158 | 13.08 | 0.00 | 45.45 | 5.87 |
187 | 208 | 1.007734 | CAGTGTACTGTGTCGCGGT | 60.008 | 57.895 | 6.13 | 2.87 | 39.09 | 5.68 |
234 | 259 | 5.924356 | TGTCTCAACAAGAACCTGTTATCA | 58.076 | 37.500 | 0.00 | 0.00 | 37.43 | 2.15 |
235 | 260 | 6.533730 | TGTCTCAACAAGAACCTGTTATCAT | 58.466 | 36.000 | 0.00 | 0.00 | 37.43 | 2.45 |
236 | 261 | 6.998074 | TGTCTCAACAAGAACCTGTTATCATT | 59.002 | 34.615 | 0.00 | 0.00 | 37.43 | 2.57 |
237 | 262 | 7.173218 | TGTCTCAACAAGAACCTGTTATCATTC | 59.827 | 37.037 | 0.00 | 0.00 | 37.43 | 2.67 |
253 | 278 | 4.436113 | TCATTCCAGCATATGTTAGCCA | 57.564 | 40.909 | 4.29 | 0.00 | 0.00 | 4.75 |
255 | 280 | 3.643199 | TTCCAGCATATGTTAGCCACA | 57.357 | 42.857 | 4.29 | 0.00 | 40.71 | 4.17 |
261 | 286 | 2.138320 | CATATGTTAGCCACAGCGAGG | 58.862 | 52.381 | 0.00 | 0.00 | 46.67 | 4.63 |
317 | 343 | 4.595781 | TGGGGTTACCTAATAGGCATACAG | 59.404 | 45.833 | 6.17 | 0.00 | 39.63 | 2.74 |
330 | 356 | 2.279741 | GCATACAGATCCAGCGTGAAA | 58.720 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
386 | 416 | 3.117794 | CTGGTGCACACTTTGAACATTG | 58.882 | 45.455 | 20.43 | 0.00 | 34.97 | 2.82 |
395 | 425 | 4.037208 | ACACTTTGAACATTGAGAAGCAGG | 59.963 | 41.667 | 0.00 | 0.00 | 0.00 | 4.85 |
396 | 426 | 3.005155 | ACTTTGAACATTGAGAAGCAGGC | 59.995 | 43.478 | 0.00 | 0.00 | 0.00 | 4.85 |
397 | 427 | 2.275134 | TGAACATTGAGAAGCAGGCA | 57.725 | 45.000 | 0.00 | 0.00 | 0.00 | 4.75 |
398 | 428 | 2.585330 | TGAACATTGAGAAGCAGGCAA | 58.415 | 42.857 | 0.00 | 0.00 | 0.00 | 4.52 |
399 | 429 | 2.555325 | TGAACATTGAGAAGCAGGCAAG | 59.445 | 45.455 | 0.00 | 0.00 | 0.00 | 4.01 |
400 | 430 | 0.886563 | ACATTGAGAAGCAGGCAAGC | 59.113 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
401 | 431 | 0.885879 | CATTGAGAAGCAGGCAAGCA | 59.114 | 50.000 | 4.78 | 0.00 | 36.85 | 3.91 |
402 | 432 | 1.135373 | CATTGAGAAGCAGGCAAGCAG | 60.135 | 52.381 | 4.78 | 0.00 | 36.85 | 4.24 |
403 | 433 | 1.521450 | TTGAGAAGCAGGCAAGCAGC | 61.521 | 55.000 | 4.78 | 0.00 | 44.65 | 5.25 |
417 | 447 | 2.567497 | GCAGCAACCACCATGCACT | 61.567 | 57.895 | 0.00 | 0.00 | 46.22 | 4.40 |
505 | 535 | 0.036306 | GTCCCCTTTCGGTCATGTGT | 59.964 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
511 | 541 | 4.509616 | CCCTTTCGGTCATGTGTTGTATA | 58.490 | 43.478 | 0.00 | 0.00 | 0.00 | 1.47 |
542 | 572 | 8.845227 | CATAATATGTGCCCAGTTTGTTACATA | 58.155 | 33.333 | 0.00 | 0.00 | 36.02 | 2.29 |
615 | 645 | 3.131933 | CAGCTGAGCCACTAATCTACACT | 59.868 | 47.826 | 8.42 | 0.00 | 0.00 | 3.55 |
616 | 646 | 3.383185 | AGCTGAGCCACTAATCTACACTC | 59.617 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
737 | 767 | 1.799519 | CTCTGCTCGCACGACTCAC | 60.800 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
820 | 850 | 1.137675 | TGATGGTGCACTAGCTAGCTG | 59.862 | 52.381 | 27.68 | 18.34 | 42.74 | 4.24 |
821 | 851 | 0.179062 | ATGGTGCACTAGCTAGCTGC | 60.179 | 55.000 | 27.68 | 27.44 | 42.74 | 5.25 |
960 | 998 | 4.619973 | CTCTCTGCTGCTAATACCTTCAG | 58.380 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
983 | 1021 | 2.917971 | GAGCTAGCCGCAGAAATATACG | 59.082 | 50.000 | 12.13 | 0.00 | 42.61 | 3.06 |
986 | 1024 | 3.852536 | GCTAGCCGCAGAAATATACGTAG | 59.147 | 47.826 | 2.29 | 0.00 | 38.92 | 3.51 |
1011 | 1049 | 0.680921 | AAATCAGGATGGGTGGTGCG | 60.681 | 55.000 | 0.00 | 0.00 | 36.16 | 5.34 |
1044 | 1082 | 4.728102 | TACGGCGCGGTGGTTCTG | 62.728 | 66.667 | 28.47 | 0.00 | 0.00 | 3.02 |
1071 | 1109 | 0.469494 | TCATGTACTCCGGCATGCAT | 59.531 | 50.000 | 21.36 | 8.36 | 41.44 | 3.96 |
1098 | 1136 | 1.139654 | AGCAAGATAGCGCTGGATCAA | 59.860 | 47.619 | 22.90 | 0.00 | 37.02 | 2.57 |
1161 | 1199 | 4.512914 | GCCCTGGTGCTCATCCCC | 62.513 | 72.222 | 0.00 | 0.00 | 0.00 | 4.81 |
1164 | 1202 | 1.616921 | CCTGGTGCTCATCCCCATT | 59.383 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
1190 | 1228 | 1.829849 | TGCTCTGGAGAGGTGAGATTG | 59.170 | 52.381 | 5.82 | 0.00 | 42.29 | 2.67 |
1205 | 1243 | 1.002900 | AGATTGTTGTTTGACACCGCG | 60.003 | 47.619 | 0.00 | 0.00 | 0.00 | 6.46 |
1206 | 1244 | 0.593773 | ATTGTTGTTTGACACCGCGC | 60.594 | 50.000 | 0.00 | 0.00 | 0.00 | 6.86 |
1207 | 1245 | 2.720750 | GTTGTTTGACACCGCGCG | 60.721 | 61.111 | 25.67 | 25.67 | 0.00 | 6.86 |
1208 | 1246 | 4.599434 | TTGTTTGACACCGCGCGC | 62.599 | 61.111 | 27.36 | 23.91 | 0.00 | 6.86 |
1222 | 1260 | 2.537560 | CGCGCCTTGATCCATGTCC | 61.538 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
1228 | 1266 | 1.293924 | CTTGATCCATGTCCGTCTGC | 58.706 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
1233 | 1271 | 1.672030 | CCATGTCCGTCTGCTTGCA | 60.672 | 57.895 | 0.00 | 0.00 | 0.00 | 4.08 |
1236 | 1274 | 1.651240 | ATGTCCGTCTGCTTGCATGC | 61.651 | 55.000 | 17.19 | 17.19 | 0.00 | 4.06 |
1240 | 1278 | 2.747460 | GTCTGCTTGCATGCCCGA | 60.747 | 61.111 | 20.65 | 14.23 | 0.00 | 5.14 |
1251 | 1289 | 1.741770 | ATGCCCGACTCGCTGTTTC | 60.742 | 57.895 | 0.00 | 0.00 | 0.00 | 2.78 |
1259 | 1297 | 3.428452 | CCGACTCGCTGTTTCATAACCTA | 60.428 | 47.826 | 0.00 | 0.00 | 33.15 | 3.08 |
1260 | 1298 | 3.546670 | CGACTCGCTGTTTCATAACCTAC | 59.453 | 47.826 | 0.00 | 0.00 | 33.15 | 3.18 |
1322 | 1362 | 3.978687 | AGACTAAACCTGTGACGTTGAG | 58.021 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
1344 | 1384 | 3.531538 | GATTGCAGGGAAGATGTTCGTA | 58.468 | 45.455 | 0.00 | 0.00 | 32.92 | 3.43 |
1353 | 1393 | 3.504863 | GAAGATGTTCGTACACGCCTTA | 58.495 | 45.455 | 0.00 | 0.00 | 37.03 | 2.69 |
1365 | 1405 | 4.699925 | ACACGCCTTATATGGGTATGTT | 57.300 | 40.909 | 6.78 | 0.00 | 0.00 | 2.71 |
1366 | 1406 | 5.811796 | ACACGCCTTATATGGGTATGTTA | 57.188 | 39.130 | 6.78 | 0.00 | 0.00 | 2.41 |
1387 | 1427 | 7.149973 | TGTTATAAGTTGTTCTAGCGTGAGTT | 58.850 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
1388 | 1428 | 7.327761 | TGTTATAAGTTGTTCTAGCGTGAGTTC | 59.672 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
1389 | 1429 | 4.323553 | AAGTTGTTCTAGCGTGAGTTCT | 57.676 | 40.909 | 0.00 | 0.00 | 0.00 | 3.01 |
1390 | 1430 | 5.449107 | AAGTTGTTCTAGCGTGAGTTCTA | 57.551 | 39.130 | 0.00 | 0.00 | 0.00 | 2.10 |
1391 | 1431 | 5.449107 | AGTTGTTCTAGCGTGAGTTCTAA | 57.551 | 39.130 | 0.00 | 0.00 | 0.00 | 2.10 |
1392 | 1432 | 5.462405 | AGTTGTTCTAGCGTGAGTTCTAAG | 58.538 | 41.667 | 0.00 | 0.00 | 0.00 | 2.18 |
1393 | 1433 | 5.009811 | AGTTGTTCTAGCGTGAGTTCTAAGT | 59.990 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
1394 | 1434 | 6.206243 | AGTTGTTCTAGCGTGAGTTCTAAGTA | 59.794 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
1395 | 1435 | 6.754702 | TGTTCTAGCGTGAGTTCTAAGTAT | 57.245 | 37.500 | 0.00 | 0.00 | 0.00 | 2.12 |
1396 | 1436 | 7.154435 | TGTTCTAGCGTGAGTTCTAAGTATT | 57.846 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
1397 | 1437 | 7.027760 | TGTTCTAGCGTGAGTTCTAAGTATTG | 58.972 | 38.462 | 0.00 | 0.00 | 0.00 | 1.90 |
1398 | 1438 | 6.754702 | TCTAGCGTGAGTTCTAAGTATTGT | 57.245 | 37.500 | 0.00 | 0.00 | 0.00 | 2.71 |
1399 | 1439 | 6.552629 | TCTAGCGTGAGTTCTAAGTATTGTG | 58.447 | 40.000 | 0.00 | 0.00 | 0.00 | 3.33 |
1400 | 1440 | 4.495422 | AGCGTGAGTTCTAAGTATTGTGG | 58.505 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
1401 | 1441 | 3.062234 | GCGTGAGTTCTAAGTATTGTGGC | 59.938 | 47.826 | 0.00 | 0.00 | 0.00 | 5.01 |
1402 | 1442 | 4.242475 | CGTGAGTTCTAAGTATTGTGGCA | 58.758 | 43.478 | 0.00 | 0.00 | 0.00 | 4.92 |
1423 | 1463 | 2.025981 | AGGCACATAGTTCATGCAGGAA | 60.026 | 45.455 | 10.22 | 10.22 | 41.27 | 3.36 |
1424 | 1464 | 2.357009 | GGCACATAGTTCATGCAGGAAG | 59.643 | 50.000 | 15.13 | 5.26 | 41.27 | 3.46 |
1439 | 1480 | 3.616821 | GCAGGAAGTGTTGTTTTGTTTCC | 59.383 | 43.478 | 0.00 | 0.00 | 35.46 | 3.13 |
1441 | 1482 | 3.119280 | AGGAAGTGTTGTTTTGTTTCCGG | 60.119 | 43.478 | 0.00 | 0.00 | 39.18 | 5.14 |
1443 | 1484 | 3.775661 | AGTGTTGTTTTGTTTCCGGAG | 57.224 | 42.857 | 3.34 | 0.00 | 0.00 | 4.63 |
1444 | 1485 | 3.349022 | AGTGTTGTTTTGTTTCCGGAGA | 58.651 | 40.909 | 3.34 | 0.00 | 0.00 | 3.71 |
1445 | 1486 | 3.759618 | AGTGTTGTTTTGTTTCCGGAGAA | 59.240 | 39.130 | 3.34 | 0.00 | 0.00 | 2.87 |
1446 | 1487 | 4.218852 | AGTGTTGTTTTGTTTCCGGAGAAA | 59.781 | 37.500 | 3.34 | 2.62 | 39.70 | 2.52 |
1447 | 1488 | 4.561213 | GTGTTGTTTTGTTTCCGGAGAAAG | 59.439 | 41.667 | 3.34 | 0.00 | 42.60 | 2.62 |
1448 | 1489 | 3.430333 | TGTTTTGTTTCCGGAGAAAGC | 57.570 | 42.857 | 3.34 | 8.25 | 42.60 | 3.51 |
1449 | 1490 | 3.020984 | TGTTTTGTTTCCGGAGAAAGCT | 58.979 | 40.909 | 3.34 | 0.00 | 42.60 | 3.74 |
1450 | 1491 | 3.445805 | TGTTTTGTTTCCGGAGAAAGCTT | 59.554 | 39.130 | 3.34 | 0.00 | 42.60 | 3.74 |
1451 | 1492 | 4.081917 | TGTTTTGTTTCCGGAGAAAGCTTT | 60.082 | 37.500 | 12.53 | 12.53 | 42.60 | 3.51 |
1452 | 1493 | 4.729227 | TTTGTTTCCGGAGAAAGCTTTT | 57.271 | 36.364 | 14.05 | 3.35 | 42.60 | 2.27 |
1453 | 1494 | 4.729227 | TTGTTTCCGGAGAAAGCTTTTT | 57.271 | 36.364 | 14.05 | 7.69 | 42.60 | 1.94 |
1500 | 1541 | 0.744874 | AAGCTAATGCATGCAGGCTG | 59.255 | 50.000 | 31.60 | 20.85 | 42.74 | 4.85 |
1514 | 1555 | 3.987404 | GCTGTGTGGCCTAGTTGG | 58.013 | 61.111 | 3.32 | 0.00 | 39.35 | 3.77 |
1560 | 1606 | 5.695851 | ATCAAGCTTTGTGTACCTTTCAG | 57.304 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
1580 | 1626 | 6.247229 | TCAGTATAAATATGGGCACACACT | 57.753 | 37.500 | 0.00 | 0.00 | 0.00 | 3.55 |
1581 | 1627 | 6.658849 | TCAGTATAAATATGGGCACACACTT | 58.341 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1582 | 1628 | 6.765989 | TCAGTATAAATATGGGCACACACTTC | 59.234 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
1583 | 1629 | 6.017109 | CAGTATAAATATGGGCACACACTTCC | 60.017 | 42.308 | 0.00 | 0.00 | 0.00 | 3.46 |
1633 | 1681 | 5.363580 | TGAGATCTTCCAGTGTGCATGTATA | 59.636 | 40.000 | 0.00 | 0.00 | 0.00 | 1.47 |
1687 | 1735 | 2.498726 | CTCTCCCTGAAGCCGCTC | 59.501 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
1690 | 1738 | 1.003355 | CTCCCTGAAGCCGCTCAAA | 60.003 | 57.895 | 0.00 | 0.00 | 0.00 | 2.69 |
1691 | 1739 | 0.393537 | CTCCCTGAAGCCGCTCAAAT | 60.394 | 55.000 | 0.00 | 0.00 | 0.00 | 2.32 |
1712 | 1760 | 9.887406 | TCAAATAAACTTACAACTTTCGGATTC | 57.113 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
1718 | 1766 | 8.441312 | AACTTACAACTTTCGGATTCTAAACA | 57.559 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
1719 | 1767 | 8.617290 | ACTTACAACTTTCGGATTCTAAACAT | 57.383 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
1720 | 1768 | 9.063615 | ACTTACAACTTTCGGATTCTAAACATT | 57.936 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
1721 | 1769 | 9.893305 | CTTACAACTTTCGGATTCTAAACATTT | 57.107 | 29.630 | 0.00 | 0.00 | 0.00 | 2.32 |
1722 | 1770 | 9.887406 | TTACAACTTTCGGATTCTAAACATTTC | 57.113 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
1723 | 1771 | 7.936584 | ACAACTTTCGGATTCTAAACATTTCA | 58.063 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
1724 | 1772 | 8.076178 | ACAACTTTCGGATTCTAAACATTTCAG | 58.924 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
1725 | 1773 | 6.612306 | ACTTTCGGATTCTAAACATTTCAGC | 58.388 | 36.000 | 0.00 | 0.00 | 0.00 | 4.26 |
1726 | 1774 | 6.431234 | ACTTTCGGATTCTAAACATTTCAGCT | 59.569 | 34.615 | 0.00 | 0.00 | 0.00 | 4.24 |
1727 | 1775 | 6.422776 | TTCGGATTCTAAACATTTCAGCTC | 57.577 | 37.500 | 0.00 | 0.00 | 0.00 | 4.09 |
1728 | 1776 | 4.876107 | TCGGATTCTAAACATTTCAGCTCC | 59.124 | 41.667 | 0.00 | 0.00 | 0.00 | 4.70 |
1729 | 1777 | 4.635765 | CGGATTCTAAACATTTCAGCTCCA | 59.364 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
1730 | 1778 | 5.297776 | CGGATTCTAAACATTTCAGCTCCAT | 59.702 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1731 | 1779 | 6.512415 | CGGATTCTAAACATTTCAGCTCCATC | 60.512 | 42.308 | 0.00 | 0.00 | 0.00 | 3.51 |
1732 | 1780 | 6.319658 | GGATTCTAAACATTTCAGCTCCATCA | 59.680 | 38.462 | 0.00 | 0.00 | 0.00 | 3.07 |
1733 | 1781 | 6.748333 | TTCTAAACATTTCAGCTCCATCAG | 57.252 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
1734 | 1782 | 5.809001 | TCTAAACATTTCAGCTCCATCAGT | 58.191 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
1735 | 1783 | 5.877012 | TCTAAACATTTCAGCTCCATCAGTC | 59.123 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1736 | 1784 | 2.996631 | ACATTTCAGCTCCATCAGTCC | 58.003 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
1737 | 1785 | 2.575279 | ACATTTCAGCTCCATCAGTCCT | 59.425 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
1738 | 1786 | 3.776969 | ACATTTCAGCTCCATCAGTCCTA | 59.223 | 43.478 | 0.00 | 0.00 | 0.00 | 2.94 |
1739 | 1787 | 4.141756 | ACATTTCAGCTCCATCAGTCCTAG | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 3.02 |
1740 | 1788 | 2.836636 | TCAGCTCCATCAGTCCTAGT | 57.163 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1741 | 1789 | 2.660572 | TCAGCTCCATCAGTCCTAGTC | 58.339 | 52.381 | 0.00 | 0.00 | 0.00 | 2.59 |
1746 | 1794 | 3.319689 | GCTCCATCAGTCCTAGTCTAACC | 59.680 | 52.174 | 0.00 | 0.00 | 0.00 | 2.85 |
1748 | 1796 | 4.537751 | TCCATCAGTCCTAGTCTAACCTG | 58.462 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
1753 | 1801 | 5.577100 | TCAGTCCTAGTCTAACCTGCTTAA | 58.423 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
1757 | 1805 | 6.497606 | AGTCCTAGTCTAACCTGCTTAACTTT | 59.502 | 38.462 | 0.00 | 0.00 | 0.00 | 2.66 |
1759 | 1807 | 7.660617 | GTCCTAGTCTAACCTGCTTAACTTTTT | 59.339 | 37.037 | 0.00 | 0.00 | 0.00 | 1.94 |
1761 | 1809 | 7.878644 | CCTAGTCTAACCTGCTTAACTTTTTCT | 59.121 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
1764 | 1812 | 7.556635 | AGTCTAACCTGCTTAACTTTTTCTTGT | 59.443 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
1767 | 1815 | 5.578776 | ACCTGCTTAACTTTTTCTTGTTCG | 58.421 | 37.500 | 0.00 | 0.00 | 0.00 | 3.95 |
1820 | 1888 | 3.788227 | AACCTTGGTCTCAACTATGCA | 57.212 | 42.857 | 0.00 | 0.00 | 0.00 | 3.96 |
1835 | 1903 | 0.034476 | ATGCATCCGCGACATCATCT | 59.966 | 50.000 | 8.23 | 0.00 | 42.97 | 2.90 |
1850 | 1918 | 2.063266 | TCATCTTCGGCGTTGTACAAC | 58.937 | 47.619 | 25.73 | 25.73 | 37.92 | 3.32 |
1893 | 1961 | 0.916086 | TCTGGCGGTCATAATTGGGT | 59.084 | 50.000 | 0.00 | 0.00 | 0.00 | 4.51 |
1894 | 1962 | 2.120312 | TCTGGCGGTCATAATTGGGTA | 58.880 | 47.619 | 0.00 | 0.00 | 0.00 | 3.69 |
1895 | 1963 | 2.506231 | TCTGGCGGTCATAATTGGGTAA | 59.494 | 45.455 | 0.00 | 0.00 | 0.00 | 2.85 |
1896 | 1964 | 3.137544 | TCTGGCGGTCATAATTGGGTAAT | 59.862 | 43.478 | 0.00 | 0.00 | 0.00 | 1.89 |
1916 | 1984 | 9.191995 | GGGTAATTAATTCAAGTGTTGTTTCTG | 57.808 | 33.333 | 3.39 | 0.00 | 0.00 | 3.02 |
1958 | 2027 | 5.865085 | ACTTGTCCTGTAACTAAGCATTCA | 58.135 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
2066 | 2138 | 4.752101 | ACAGAGTTCAGAACATGCACTTAC | 59.248 | 41.667 | 15.85 | 0.00 | 35.36 | 2.34 |
2068 | 2140 | 6.159293 | CAGAGTTCAGAACATGCACTTACTA | 58.841 | 40.000 | 15.85 | 0.00 | 35.36 | 1.82 |
2069 | 2141 | 6.646653 | CAGAGTTCAGAACATGCACTTACTAA | 59.353 | 38.462 | 15.85 | 0.00 | 35.36 | 2.24 |
2070 | 2142 | 7.171508 | CAGAGTTCAGAACATGCACTTACTAAA | 59.828 | 37.037 | 15.85 | 0.00 | 35.36 | 1.85 |
2071 | 2143 | 7.171678 | AGAGTTCAGAACATGCACTTACTAAAC | 59.828 | 37.037 | 15.85 | 0.00 | 35.36 | 2.01 |
2114 | 2188 | 1.117142 | TGTCGGTCGGTTCCTTTCCT | 61.117 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2116 | 2190 | 0.319405 | TCGGTCGGTTCCTTTCCTTC | 59.681 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2120 | 2194 | 0.475048 | TCGGTTCCTTTCCTTCCCCT | 60.475 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2121 | 2195 | 1.203338 | TCGGTTCCTTTCCTTCCCCTA | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
2144 | 2218 | 5.712152 | AAGAACAAATTCCCTGTGATGTC | 57.288 | 39.130 | 0.00 | 0.00 | 35.18 | 3.06 |
2164 | 2238 | 4.777366 | TGTCACAGGATGGAGTCTATGAAA | 59.223 | 41.667 | 0.00 | 0.00 | 43.62 | 2.69 |
2256 | 2330 | 0.539986 | TTCTACGAGGGGCCAATGTC | 59.460 | 55.000 | 4.39 | 0.00 | 0.00 | 3.06 |
2381 | 2455 | 3.937706 | CCTCATGACACTCTCCAACATTC | 59.062 | 47.826 | 0.00 | 0.00 | 0.00 | 2.67 |
2498 | 2573 | 4.045636 | ACTGCAACTTGTTGATGGTTTC | 57.954 | 40.909 | 16.57 | 0.00 | 0.00 | 2.78 |
2568 | 2643 | 2.593134 | GCAGATCTCATGCGCGTCC | 61.593 | 63.158 | 8.43 | 0.00 | 33.31 | 4.79 |
2661 | 2736 | 1.537638 | CTCGCCGCTATCATCTACAGT | 59.462 | 52.381 | 0.00 | 0.00 | 0.00 | 3.55 |
2668 | 2743 | 4.212150 | CGCTATCATCTACAGTGTACGTG | 58.788 | 47.826 | 0.00 | 1.61 | 0.00 | 4.49 |
2669 | 2744 | 4.260661 | CGCTATCATCTACAGTGTACGTGT | 60.261 | 45.833 | 0.00 | 6.01 | 0.00 | 4.49 |
2672 | 2747 | 7.361127 | GCTATCATCTACAGTGTACGTGTAAT | 58.639 | 38.462 | 0.00 | 3.57 | 30.04 | 1.89 |
2699 | 2774 | 4.687483 | GCCTCAGAAACAATGTTCATTTGG | 59.313 | 41.667 | 0.00 | 1.44 | 0.00 | 3.28 |
2738 | 2813 | 2.726821 | TGATTTGCTTCTCCATGGGAC | 58.273 | 47.619 | 13.02 | 0.00 | 0.00 | 4.46 |
2837 | 2912 | 2.191375 | CTCGCCATGTCCATGCCT | 59.809 | 61.111 | 1.64 | 0.00 | 37.49 | 4.75 |
2867 | 2942 | 7.813627 | ACTCTGATCTTCACAATCATCATATCG | 59.186 | 37.037 | 0.00 | 0.00 | 32.91 | 2.92 |
2912 | 2987 | 1.226888 | CCTAGGAAGGTACGTGCGC | 60.227 | 63.158 | 1.05 | 0.00 | 38.19 | 6.09 |
2913 | 2988 | 1.509463 | CTAGGAAGGTACGTGCGCA | 59.491 | 57.895 | 5.66 | 5.66 | 31.45 | 6.09 |
2914 | 2989 | 0.108992 | CTAGGAAGGTACGTGCGCAA | 60.109 | 55.000 | 14.00 | 0.00 | 31.45 | 4.85 |
2915 | 2990 | 0.533491 | TAGGAAGGTACGTGCGCAAT | 59.467 | 50.000 | 14.00 | 6.07 | 31.45 | 3.56 |
2916 | 2991 | 0.533491 | AGGAAGGTACGTGCGCAATA | 59.467 | 50.000 | 14.00 | 4.82 | 31.45 | 1.90 |
2917 | 2992 | 1.138266 | AGGAAGGTACGTGCGCAATAT | 59.862 | 47.619 | 14.00 | 2.47 | 31.45 | 1.28 |
2918 | 2993 | 2.363038 | AGGAAGGTACGTGCGCAATATA | 59.637 | 45.455 | 14.00 | 1.27 | 31.45 | 0.86 |
2945 | 3042 | 6.280855 | TGTGCAATTAAGCTCTAGTCTACA | 57.719 | 37.500 | 0.00 | 0.00 | 34.99 | 2.74 |
3023 | 3128 | 8.754080 | AGTATAATTGCTGGGATACTACTGATC | 58.246 | 37.037 | 0.00 | 0.00 | 34.18 | 2.92 |
3106 | 3211 | 2.360726 | GGGTGGCGGTAAACCTGG | 60.361 | 66.667 | 0.00 | 0.00 | 36.64 | 4.45 |
3322 | 3440 | 1.647545 | CGCCATTGCTGTACCCACTG | 61.648 | 60.000 | 0.00 | 0.00 | 34.43 | 3.66 |
3330 | 3448 | 0.247736 | CTGTACCCACTGTCTGCCTC | 59.752 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
3445 | 3589 | 1.996898 | CAGCACGCACTATTTTACGGA | 59.003 | 47.619 | 0.00 | 0.00 | 0.00 | 4.69 |
3501 | 3645 | 1.952990 | CTGTGTGTTTGCCACCATGTA | 59.047 | 47.619 | 0.00 | 0.00 | 43.85 | 2.29 |
3502 | 3646 | 2.557924 | CTGTGTGTTTGCCACCATGTAT | 59.442 | 45.455 | 0.00 | 0.00 | 43.85 | 2.29 |
3503 | 3647 | 2.295629 | TGTGTGTTTGCCACCATGTATG | 59.704 | 45.455 | 0.00 | 0.00 | 43.85 | 2.39 |
3504 | 3648 | 2.295909 | GTGTGTTTGCCACCATGTATGT | 59.704 | 45.455 | 0.00 | 0.00 | 43.85 | 2.29 |
3577 | 3722 | 3.451178 | GGCTACTGATGACTGGTTAGGAA | 59.549 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
3578 | 3723 | 4.101741 | GGCTACTGATGACTGGTTAGGAAT | 59.898 | 45.833 | 0.00 | 0.00 | 0.00 | 3.01 |
3579 | 3724 | 5.304614 | GGCTACTGATGACTGGTTAGGAATA | 59.695 | 44.000 | 0.00 | 0.00 | 0.00 | 1.75 |
3580 | 3725 | 6.451393 | GCTACTGATGACTGGTTAGGAATAG | 58.549 | 44.000 | 0.00 | 0.00 | 0.00 | 1.73 |
3581 | 3726 | 5.878406 | ACTGATGACTGGTTAGGAATAGG | 57.122 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
3582 | 3727 | 5.529289 | ACTGATGACTGGTTAGGAATAGGA | 58.471 | 41.667 | 0.00 | 0.00 | 0.00 | 2.94 |
3667 | 3822 | 5.481824 | TGGAGCACATAGGAGGAGTAATATG | 59.518 | 44.000 | 0.00 | 0.00 | 0.00 | 1.78 |
3679 | 3834 | 8.494433 | AGGAGGAGTAATATGTATTTGCAGAAA | 58.506 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
3796 | 3951 | 1.811965 | CGCCCACTGTTGATTGATTGA | 59.188 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
3797 | 3952 | 2.228582 | CGCCCACTGTTGATTGATTGAA | 59.771 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
3798 | 3953 | 3.119388 | CGCCCACTGTTGATTGATTGAAT | 60.119 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
14 | 15 | 9.755122 | ATCTTTTTAAGCAAGTTCTTATAGGGT | 57.245 | 29.630 | 0.00 | 0.00 | 0.00 | 4.34 |
40 | 41 | 9.303116 | TCCAAGGACTTGCTAATAATTTGTTAA | 57.697 | 29.630 | 6.54 | 0.00 | 39.16 | 2.01 |
44 | 45 | 7.630242 | TCTCCAAGGACTTGCTAATAATTTG | 57.370 | 36.000 | 6.54 | 0.00 | 39.16 | 2.32 |
124 | 143 | 2.771763 | AAGGTTGCTCCGCTGAGACG | 62.772 | 60.000 | 9.60 | 0.00 | 41.42 | 4.18 |
140 | 159 | 4.642885 | TCAAACTACTGGGTTTCAACAAGG | 59.357 | 41.667 | 0.00 | 0.00 | 37.32 | 3.61 |
148 | 167 | 4.027437 | TGCCTTTTCAAACTACTGGGTTT | 58.973 | 39.130 | 0.00 | 0.00 | 39.62 | 3.27 |
171 | 192 | 1.002250 | CTCACCGCGACACAGTACAC | 61.002 | 60.000 | 8.23 | 0.00 | 0.00 | 2.90 |
185 | 206 | 0.102300 | AAGTTTTTGCACGGCTCACC | 59.898 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
187 | 208 | 1.919918 | CAAAGTTTTTGCACGGCTCA | 58.080 | 45.000 | 0.00 | 0.00 | 0.00 | 4.26 |
234 | 259 | 4.139786 | CTGTGGCTAACATATGCTGGAAT | 58.860 | 43.478 | 1.58 | 0.00 | 38.39 | 3.01 |
235 | 260 | 3.544684 | CTGTGGCTAACATATGCTGGAA | 58.455 | 45.455 | 1.58 | 0.00 | 38.39 | 3.53 |
236 | 261 | 2.746142 | GCTGTGGCTAACATATGCTGGA | 60.746 | 50.000 | 1.58 | 0.00 | 38.39 | 3.86 |
237 | 262 | 1.605710 | GCTGTGGCTAACATATGCTGG | 59.394 | 52.381 | 1.58 | 0.00 | 38.39 | 4.85 |
253 | 278 | 2.477176 | TTTTTGCACGCCTCGCTGT | 61.477 | 52.632 | 0.00 | 0.00 | 0.00 | 4.40 |
255 | 280 | 1.724582 | AAGTTTTTGCACGCCTCGCT | 61.725 | 50.000 | 0.00 | 0.00 | 0.00 | 4.93 |
307 | 333 | 1.341209 | CACGCTGGATCTGTATGCCTA | 59.659 | 52.381 | 0.00 | 0.00 | 0.00 | 3.93 |
317 | 343 | 3.935203 | TGAGAATTCTTTCACGCTGGATC | 59.065 | 43.478 | 9.87 | 0.00 | 34.08 | 3.36 |
386 | 416 | 1.521450 | TTGCTGCTTGCCTGCTTCTC | 61.521 | 55.000 | 0.00 | 0.00 | 42.00 | 2.87 |
395 | 425 | 1.373748 | CATGGTGGTTGCTGCTTGC | 60.374 | 57.895 | 0.00 | 0.00 | 43.25 | 4.01 |
396 | 426 | 1.373748 | GCATGGTGGTTGCTGCTTG | 60.374 | 57.895 | 0.00 | 0.00 | 37.14 | 4.01 |
397 | 427 | 1.833492 | TGCATGGTGGTTGCTGCTT | 60.833 | 52.632 | 0.00 | 0.00 | 40.77 | 3.91 |
398 | 428 | 2.203523 | TGCATGGTGGTTGCTGCT | 60.204 | 55.556 | 0.00 | 0.00 | 40.77 | 4.24 |
399 | 429 | 2.048877 | GTGCATGGTGGTTGCTGC | 60.049 | 61.111 | 0.00 | 0.00 | 40.77 | 5.25 |
400 | 430 | 0.319211 | CAAGTGCATGGTGGTTGCTG | 60.319 | 55.000 | 0.00 | 0.00 | 40.77 | 4.41 |
401 | 431 | 2.043625 | CAAGTGCATGGTGGTTGCT | 58.956 | 52.632 | 0.00 | 0.00 | 40.77 | 3.91 |
402 | 432 | 1.665599 | GCAAGTGCATGGTGGTTGC | 60.666 | 57.895 | 0.00 | 0.00 | 41.59 | 4.17 |
403 | 433 | 1.005867 | GGCAAGTGCATGGTGGTTG | 60.006 | 57.895 | 5.52 | 0.00 | 44.36 | 3.77 |
404 | 434 | 0.760189 | AAGGCAAGTGCATGGTGGTT | 60.760 | 50.000 | 5.52 | 0.00 | 44.36 | 3.67 |
452 | 482 | 1.228956 | TGATGGGGCAAGCAAGCTT | 60.229 | 52.632 | 0.59 | 0.59 | 36.60 | 3.74 |
505 | 535 | 7.401246 | TGGGCACATATTATGCAGATATACAA | 58.599 | 34.615 | 10.20 | 0.00 | 45.27 | 2.41 |
511 | 541 | 4.377762 | ACTGGGCACATATTATGCAGAT | 57.622 | 40.909 | 12.94 | 0.00 | 45.27 | 2.90 |
542 | 572 | 1.021968 | GTGGAAAACGCAGAGGTTGT | 58.978 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
615 | 645 | 9.760077 | GAGTCGATCCCAACTAATTATTTAAGA | 57.240 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
616 | 646 | 9.542462 | TGAGTCGATCCCAACTAATTATTTAAG | 57.458 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
737 | 767 | 1.039233 | AGCGGATGGAAAATGCTGGG | 61.039 | 55.000 | 0.00 | 0.00 | 33.99 | 4.45 |
778 | 808 | 3.072211 | CCTAATCAGTGATGCATGCGAT | 58.928 | 45.455 | 14.09 | 7.77 | 0.00 | 4.58 |
779 | 809 | 2.158914 | ACCTAATCAGTGATGCATGCGA | 60.159 | 45.455 | 14.09 | 2.93 | 0.00 | 5.10 |
780 | 810 | 2.032290 | CACCTAATCAGTGATGCATGCG | 60.032 | 50.000 | 14.09 | 0.00 | 37.42 | 4.73 |
781 | 811 | 3.208594 | TCACCTAATCAGTGATGCATGC | 58.791 | 45.455 | 11.82 | 11.82 | 39.29 | 4.06 |
820 | 850 | 1.961277 | CGGATAATCCCAGGCACGC | 60.961 | 63.158 | 0.00 | 0.00 | 31.13 | 5.34 |
821 | 851 | 0.880278 | CACGGATAATCCCAGGCACG | 60.880 | 60.000 | 0.00 | 0.00 | 31.13 | 5.34 |
822 | 852 | 0.180406 | ACACGGATAATCCCAGGCAC | 59.820 | 55.000 | 0.00 | 0.00 | 31.13 | 5.01 |
826 | 856 | 2.224066 | GGAGTGACACGGATAATCCCAG | 60.224 | 54.545 | 0.00 | 0.00 | 31.13 | 4.45 |
828 | 858 | 1.269621 | CGGAGTGACACGGATAATCCC | 60.270 | 57.143 | 0.00 | 0.00 | 31.13 | 3.85 |
829 | 859 | 2.135664 | CGGAGTGACACGGATAATCC | 57.864 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
938 | 976 | 4.340666 | TCTGAAGGTATTAGCAGCAGAGAG | 59.659 | 45.833 | 11.33 | 0.00 | 0.00 | 3.20 |
983 | 1021 | 4.576463 | CACCCATCCTGATTTTGCTACTAC | 59.424 | 45.833 | 0.00 | 0.00 | 0.00 | 2.73 |
986 | 1024 | 2.689983 | CCACCCATCCTGATTTTGCTAC | 59.310 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
1044 | 1082 | 1.341531 | CCGGAGTACATGACCCTGATC | 59.658 | 57.143 | 0.00 | 0.00 | 0.00 | 2.92 |
1071 | 1109 | 3.582780 | CAGCGCTATCTTGCTCATGATA | 58.417 | 45.455 | 10.99 | 5.66 | 40.03 | 2.15 |
1086 | 1124 | 1.822613 | CATGCCTTGATCCAGCGCT | 60.823 | 57.895 | 2.64 | 2.64 | 0.00 | 5.92 |
1098 | 1136 | 1.201429 | AGACGAAGGGGTTCATGCCT | 61.201 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
1161 | 1199 | 2.163815 | CCTCTCCAGAGCAAAAGCAATG | 59.836 | 50.000 | 0.00 | 0.00 | 40.75 | 2.82 |
1164 | 1202 | 0.767375 | ACCTCTCCAGAGCAAAAGCA | 59.233 | 50.000 | 0.00 | 0.00 | 40.75 | 3.91 |
1190 | 1228 | 2.720750 | CGCGCGGTGTCAAACAAC | 60.721 | 61.111 | 24.84 | 0.00 | 31.00 | 3.32 |
1205 | 1243 | 2.537560 | CGGACATGGATCAAGGCGC | 61.538 | 63.158 | 0.00 | 0.00 | 0.00 | 6.53 |
1206 | 1244 | 1.153369 | ACGGACATGGATCAAGGCG | 60.153 | 57.895 | 0.00 | 0.00 | 0.00 | 5.52 |
1207 | 1245 | 0.179000 | AGACGGACATGGATCAAGGC | 59.821 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
1208 | 1246 | 1.945387 | CAGACGGACATGGATCAAGG | 58.055 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
1216 | 1254 | 0.098200 | CATGCAAGCAGACGGACATG | 59.902 | 55.000 | 0.00 | 0.00 | 0.00 | 3.21 |
1222 | 1260 | 4.170062 | CGGGCATGCAAGCAGACG | 62.170 | 66.667 | 21.36 | 12.74 | 35.83 | 4.18 |
1228 | 1266 | 3.869272 | GCGAGTCGGGCATGCAAG | 61.869 | 66.667 | 21.36 | 12.68 | 0.00 | 4.01 |
1233 | 1271 | 1.741770 | GAAACAGCGAGTCGGGCAT | 60.742 | 57.895 | 15.52 | 0.00 | 0.00 | 4.40 |
1236 | 1274 | 1.659098 | GTTATGAAACAGCGAGTCGGG | 59.341 | 52.381 | 15.52 | 0.00 | 35.56 | 5.14 |
1240 | 1278 | 4.803098 | AGTAGGTTATGAAACAGCGAGT | 57.197 | 40.909 | 0.00 | 0.00 | 37.34 | 4.18 |
1271 | 1310 | 3.313526 | GCGCAACAAGAGAATCATGGTAT | 59.686 | 43.478 | 0.30 | 0.00 | 38.31 | 2.73 |
1322 | 1362 | 1.672881 | CGAACATCTTCCCTGCAATCC | 59.327 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
1344 | 1384 | 4.699925 | AACATACCCATATAAGGCGTGT | 57.300 | 40.909 | 0.00 | 0.00 | 0.00 | 4.49 |
1365 | 1405 | 7.154435 | AGAACTCACGCTAGAACAACTTATA | 57.846 | 36.000 | 0.00 | 0.00 | 0.00 | 0.98 |
1366 | 1406 | 6.026947 | AGAACTCACGCTAGAACAACTTAT | 57.973 | 37.500 | 0.00 | 0.00 | 0.00 | 1.73 |
1387 | 1427 | 2.985896 | GTGCCTGCCACAATACTTAGA | 58.014 | 47.619 | 0.00 | 0.00 | 44.06 | 2.10 |
1397 | 1437 | 1.402968 | CATGAACTATGTGCCTGCCAC | 59.597 | 52.381 | 0.00 | 0.00 | 44.90 | 5.01 |
1398 | 1438 | 1.753930 | CATGAACTATGTGCCTGCCA | 58.246 | 50.000 | 0.00 | 0.00 | 31.92 | 4.92 |
1399 | 1439 | 0.383231 | GCATGAACTATGTGCCTGCC | 59.617 | 55.000 | 0.00 | 0.00 | 39.08 | 4.85 |
1400 | 1440 | 1.065102 | CTGCATGAACTATGTGCCTGC | 59.935 | 52.381 | 0.00 | 0.01 | 39.08 | 4.85 |
1401 | 1441 | 1.674441 | CCTGCATGAACTATGTGCCTG | 59.326 | 52.381 | 0.00 | 0.00 | 39.08 | 4.85 |
1402 | 1442 | 1.561076 | TCCTGCATGAACTATGTGCCT | 59.439 | 47.619 | 0.00 | 0.00 | 39.08 | 4.75 |
1423 | 1463 | 3.349022 | TCTCCGGAAACAAAACAACACT | 58.651 | 40.909 | 5.23 | 0.00 | 0.00 | 3.55 |
1424 | 1464 | 3.768468 | TCTCCGGAAACAAAACAACAC | 57.232 | 42.857 | 5.23 | 0.00 | 0.00 | 3.32 |
1466 | 1507 | 0.405973 | AGCTTTCTCTGGAAACCCCC | 59.594 | 55.000 | 0.00 | 0.00 | 36.63 | 5.40 |
1467 | 1508 | 3.434940 | TTAGCTTTCTCTGGAAACCCC | 57.565 | 47.619 | 0.00 | 0.00 | 36.63 | 4.95 |
1468 | 1509 | 3.129462 | GCATTAGCTTTCTCTGGAAACCC | 59.871 | 47.826 | 0.00 | 0.00 | 36.63 | 4.11 |
1469 | 1510 | 3.758554 | TGCATTAGCTTTCTCTGGAAACC | 59.241 | 43.478 | 0.00 | 0.00 | 42.74 | 3.27 |
1470 | 1511 | 5.338365 | CATGCATTAGCTTTCTCTGGAAAC | 58.662 | 41.667 | 0.00 | 0.00 | 42.74 | 2.78 |
1471 | 1512 | 4.142315 | GCATGCATTAGCTTTCTCTGGAAA | 60.142 | 41.667 | 14.21 | 0.00 | 42.74 | 3.13 |
1472 | 1513 | 3.379372 | GCATGCATTAGCTTTCTCTGGAA | 59.621 | 43.478 | 14.21 | 0.00 | 42.74 | 3.53 |
1473 | 1514 | 2.947652 | GCATGCATTAGCTTTCTCTGGA | 59.052 | 45.455 | 14.21 | 0.00 | 42.74 | 3.86 |
1474 | 1515 | 2.686405 | TGCATGCATTAGCTTTCTCTGG | 59.314 | 45.455 | 18.46 | 0.00 | 42.74 | 3.86 |
1475 | 1516 | 3.243101 | CCTGCATGCATTAGCTTTCTCTG | 60.243 | 47.826 | 22.97 | 4.20 | 42.74 | 3.35 |
1476 | 1517 | 2.950309 | CCTGCATGCATTAGCTTTCTCT | 59.050 | 45.455 | 22.97 | 0.00 | 42.74 | 3.10 |
1477 | 1518 | 2.543238 | GCCTGCATGCATTAGCTTTCTC | 60.543 | 50.000 | 22.97 | 0.00 | 42.74 | 2.87 |
1514 | 1555 | 1.555075 | TCTCCACACAGGACTATTGGC | 59.445 | 52.381 | 0.00 | 0.00 | 43.07 | 4.52 |
1560 | 1606 | 5.240844 | GGGAAGTGTGTGCCCATATTTATAC | 59.759 | 44.000 | 0.00 | 0.00 | 41.64 | 1.47 |
1580 | 1626 | 2.676750 | CGATCGGACACTTGATTGGGAA | 60.677 | 50.000 | 7.38 | 0.00 | 0.00 | 3.97 |
1581 | 1627 | 1.134818 | CGATCGGACACTTGATTGGGA | 60.135 | 52.381 | 7.38 | 0.00 | 0.00 | 4.37 |
1582 | 1628 | 1.290203 | CGATCGGACACTTGATTGGG | 58.710 | 55.000 | 7.38 | 0.00 | 0.00 | 4.12 |
1583 | 1629 | 1.660607 | CACGATCGGACACTTGATTGG | 59.339 | 52.381 | 20.98 | 0.00 | 31.47 | 3.16 |
1687 | 1735 | 9.893305 | AGAATCCGAAAGTTGTAAGTTTATTTG | 57.107 | 29.630 | 0.00 | 0.00 | 32.00 | 2.32 |
1712 | 1760 | 5.065731 | GGACTGATGGAGCTGAAATGTTTAG | 59.934 | 44.000 | 0.00 | 0.00 | 0.00 | 1.85 |
1717 | 1765 | 3.278668 | AGGACTGATGGAGCTGAAATG | 57.721 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
1718 | 1766 | 4.036518 | ACTAGGACTGATGGAGCTGAAAT | 58.963 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
1719 | 1767 | 3.445008 | ACTAGGACTGATGGAGCTGAAA | 58.555 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
1720 | 1768 | 3.027412 | GACTAGGACTGATGGAGCTGAA | 58.973 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1721 | 1769 | 2.243478 | AGACTAGGACTGATGGAGCTGA | 59.757 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
1722 | 1770 | 2.665165 | AGACTAGGACTGATGGAGCTG | 58.335 | 52.381 | 0.00 | 0.00 | 0.00 | 4.24 |
1723 | 1771 | 4.211920 | GTTAGACTAGGACTGATGGAGCT | 58.788 | 47.826 | 0.00 | 0.00 | 0.00 | 4.09 |
1724 | 1772 | 3.319689 | GGTTAGACTAGGACTGATGGAGC | 59.680 | 52.174 | 0.00 | 0.00 | 0.00 | 4.70 |
1725 | 1773 | 4.582656 | CAGGTTAGACTAGGACTGATGGAG | 59.417 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1726 | 1774 | 4.537751 | CAGGTTAGACTAGGACTGATGGA | 58.462 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
1727 | 1775 | 3.068873 | GCAGGTTAGACTAGGACTGATGG | 59.931 | 52.174 | 11.90 | 0.00 | 0.00 | 3.51 |
1728 | 1776 | 3.957497 | AGCAGGTTAGACTAGGACTGATG | 59.043 | 47.826 | 11.90 | 0.22 | 0.00 | 3.07 |
1729 | 1777 | 4.258457 | AGCAGGTTAGACTAGGACTGAT | 57.742 | 45.455 | 11.90 | 5.22 | 0.00 | 2.90 |
1730 | 1778 | 3.741245 | AGCAGGTTAGACTAGGACTGA | 57.259 | 47.619 | 11.90 | 0.00 | 0.00 | 3.41 |
1731 | 1779 | 5.419471 | AGTTAAGCAGGTTAGACTAGGACTG | 59.581 | 44.000 | 0.00 | 6.03 | 0.00 | 3.51 |
1732 | 1780 | 5.581975 | AGTTAAGCAGGTTAGACTAGGACT | 58.418 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
1733 | 1781 | 5.918426 | AGTTAAGCAGGTTAGACTAGGAC | 57.082 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
1734 | 1782 | 6.930068 | AAAGTTAAGCAGGTTAGACTAGGA | 57.070 | 37.500 | 0.00 | 0.00 | 0.00 | 2.94 |
1735 | 1783 | 7.878644 | AGAAAAAGTTAAGCAGGTTAGACTAGG | 59.121 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
1736 | 1784 | 8.834749 | AGAAAAAGTTAAGCAGGTTAGACTAG | 57.165 | 34.615 | 7.30 | 0.00 | 0.00 | 2.57 |
1737 | 1785 | 9.052759 | CAAGAAAAAGTTAAGCAGGTTAGACTA | 57.947 | 33.333 | 7.30 | 0.00 | 0.00 | 2.59 |
1738 | 1786 | 7.556635 | ACAAGAAAAAGTTAAGCAGGTTAGACT | 59.443 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
1739 | 1787 | 7.704271 | ACAAGAAAAAGTTAAGCAGGTTAGAC | 58.296 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
1740 | 1788 | 7.875327 | ACAAGAAAAAGTTAAGCAGGTTAGA | 57.125 | 32.000 | 0.00 | 0.00 | 0.00 | 2.10 |
1741 | 1789 | 7.376072 | CGAACAAGAAAAAGTTAAGCAGGTTAG | 59.624 | 37.037 | 0.00 | 0.00 | 0.00 | 2.34 |
1746 | 1794 | 6.578919 | GGATCGAACAAGAAAAAGTTAAGCAG | 59.421 | 38.462 | 0.00 | 0.00 | 0.00 | 4.24 |
1748 | 1796 | 5.856986 | GGGATCGAACAAGAAAAAGTTAAGC | 59.143 | 40.000 | 0.00 | 0.00 | 0.00 | 3.09 |
1753 | 1801 | 3.821033 | CCTGGGATCGAACAAGAAAAAGT | 59.179 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
1757 | 1805 | 1.702957 | ACCCTGGGATCGAACAAGAAA | 59.297 | 47.619 | 22.23 | 0.00 | 0.00 | 2.52 |
1759 | 1807 | 2.235402 | GTTACCCTGGGATCGAACAAGA | 59.765 | 50.000 | 22.23 | 0.00 | 0.00 | 3.02 |
1761 | 1809 | 1.979308 | TGTTACCCTGGGATCGAACAA | 59.021 | 47.619 | 22.23 | 6.26 | 0.00 | 2.83 |
1764 | 1812 | 0.539986 | GCTGTTACCCTGGGATCGAA | 59.460 | 55.000 | 22.23 | 4.89 | 0.00 | 3.71 |
1767 | 1815 | 1.212935 | ACATGCTGTTACCCTGGGATC | 59.787 | 52.381 | 22.23 | 9.51 | 0.00 | 3.36 |
1820 | 1888 | 0.319040 | CCGAAGATGATGTCGCGGAT | 60.319 | 55.000 | 6.13 | 0.00 | 46.03 | 4.18 |
1850 | 1918 | 2.237416 | GGTAACCACCGGTTGAACG | 58.763 | 57.895 | 13.50 | 0.00 | 46.35 | 3.95 |
1895 | 1963 | 9.520204 | CAGAACAGAAACAACACTTGAATTAAT | 57.480 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
1896 | 1964 | 8.735315 | TCAGAACAGAAACAACACTTGAATTAA | 58.265 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
1910 | 1978 | 3.063485 | GAGCAGAGGTCAGAACAGAAAC | 58.937 | 50.000 | 0.00 | 0.00 | 0.00 | 2.78 |
1916 | 1984 | 2.685897 | AGTATCGAGCAGAGGTCAGAAC | 59.314 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1967 | 2039 | 9.727859 | TGTACTACTAGTTTATTTTGATGCCAA | 57.272 | 29.630 | 0.00 | 0.00 | 0.00 | 4.52 |
1968 | 2040 | 9.899661 | ATGTACTACTAGTTTATTTTGATGCCA | 57.100 | 29.630 | 0.00 | 0.00 | 0.00 | 4.92 |
1970 | 2042 | 9.651718 | GCATGTACTACTAGTTTATTTTGATGC | 57.348 | 33.333 | 0.00 | 2.25 | 0.00 | 3.91 |
1978 | 2050 | 9.973450 | CAGAGAATGCATGTACTACTAGTTTAT | 57.027 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2005 | 2077 | 3.987220 | CGGTTTTTGATTTGGTAAGCCAG | 59.013 | 43.478 | 0.00 | 0.00 | 46.91 | 4.85 |
2066 | 2138 | 4.319549 | GCTTTTCCGTCCAGACTTGTTTAG | 60.320 | 45.833 | 0.00 | 0.00 | 0.00 | 1.85 |
2068 | 2140 | 2.357952 | GCTTTTCCGTCCAGACTTGTTT | 59.642 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
2069 | 2141 | 1.947456 | GCTTTTCCGTCCAGACTTGTT | 59.053 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
2070 | 2142 | 1.141053 | AGCTTTTCCGTCCAGACTTGT | 59.859 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
2071 | 2143 | 1.884235 | AGCTTTTCCGTCCAGACTTG | 58.116 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2114 | 2188 | 5.083821 | CAGGGAATTTGTTCTTTAGGGGAA | 58.916 | 41.667 | 0.00 | 0.00 | 0.00 | 3.97 |
2116 | 2190 | 4.220602 | CACAGGGAATTTGTTCTTTAGGGG | 59.779 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
2120 | 2194 | 6.775142 | TGACATCACAGGGAATTTGTTCTTTA | 59.225 | 34.615 | 0.00 | 0.00 | 0.00 | 1.85 |
2121 | 2195 | 5.598005 | TGACATCACAGGGAATTTGTTCTTT | 59.402 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2144 | 2218 | 5.105187 | TCAGTTTCATAGACTCCATCCTGTG | 60.105 | 44.000 | 0.00 | 0.00 | 0.00 | 3.66 |
2164 | 2238 | 0.694771 | TGCCATGGAGCTTCTTCAGT | 59.305 | 50.000 | 18.40 | 0.00 | 0.00 | 3.41 |
2256 | 2330 | 2.679837 | CGGTGATGGTTGAAAGATCTGG | 59.320 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2381 | 2455 | 0.322975 | ACAGTCCACAAGCCTGCTAG | 59.677 | 55.000 | 0.00 | 0.00 | 0.00 | 3.42 |
2435 | 2509 | 6.294955 | GGGTCTGAAGCTCTGAAAAATGAAAT | 60.295 | 38.462 | 0.00 | 0.00 | 0.00 | 2.17 |
2436 | 2510 | 5.010012 | GGGTCTGAAGCTCTGAAAAATGAAA | 59.990 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2568 | 2643 | 4.003788 | ACCACGAAGGCCTGGACG | 62.004 | 66.667 | 15.38 | 18.26 | 43.14 | 4.79 |
2661 | 2736 | 3.508402 | TCTGAGGCTCAATTACACGTACA | 59.492 | 43.478 | 19.29 | 0.00 | 0.00 | 2.90 |
2668 | 2743 | 6.259550 | ACATTGTTTCTGAGGCTCAATTAC | 57.740 | 37.500 | 19.29 | 15.42 | 0.00 | 1.89 |
2669 | 2744 | 6.489700 | TGAACATTGTTTCTGAGGCTCAATTA | 59.510 | 34.615 | 19.29 | 4.20 | 0.00 | 1.40 |
2672 | 2747 | 4.206375 | TGAACATTGTTTCTGAGGCTCAA | 58.794 | 39.130 | 19.29 | 6.96 | 0.00 | 3.02 |
2738 | 2813 | 1.372004 | CACGCCCTGCATGTTTGTG | 60.372 | 57.895 | 0.00 | 0.00 | 0.00 | 3.33 |
2740 | 2815 | 0.179156 | GATCACGCCCTGCATGTTTG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 2.93 |
2837 | 2912 | 5.990120 | TGATTGTGAAGATCAGAGTGAGA | 57.010 | 39.130 | 0.00 | 0.00 | 0.00 | 3.27 |
2867 | 2942 | 1.991264 | GCCTCTCCTAAAACGAACGAC | 59.009 | 52.381 | 0.14 | 0.00 | 0.00 | 4.34 |
2916 | 2991 | 9.401058 | AGACTAGAGCTTAATTGCACATTTTAT | 57.599 | 29.630 | 0.00 | 0.00 | 34.99 | 1.40 |
2917 | 2992 | 8.792830 | AGACTAGAGCTTAATTGCACATTTTA | 57.207 | 30.769 | 0.00 | 0.00 | 34.99 | 1.52 |
2918 | 2993 | 7.693969 | AGACTAGAGCTTAATTGCACATTTT | 57.306 | 32.000 | 0.00 | 0.00 | 34.99 | 1.82 |
2984 | 3089 | 5.363939 | GCAATTATACTGCTCAGGAGAGTT | 58.636 | 41.667 | 0.00 | 0.00 | 44.00 | 3.01 |
2985 | 3090 | 4.954875 | GCAATTATACTGCTCAGGAGAGT | 58.045 | 43.478 | 0.00 | 3.98 | 44.00 | 3.24 |
3023 | 3128 | 1.445582 | GACGTTGTACAGGCCTCCG | 60.446 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
3106 | 3211 | 1.228245 | TTGTCTTGCACCTCCTGGC | 60.228 | 57.895 | 0.00 | 0.00 | 36.63 | 4.85 |
3114 | 3219 | 1.860484 | GCCTGCTCCTTGTCTTGCAC | 61.860 | 60.000 | 0.00 | 0.00 | 0.00 | 4.57 |
3256 | 3361 | 2.562912 | GCCAGTTCACGGTGCATG | 59.437 | 61.111 | 2.51 | 1.93 | 0.00 | 4.06 |
3257 | 3362 | 3.049674 | CGCCAGTTCACGGTGCAT | 61.050 | 61.111 | 2.51 | 0.00 | 0.00 | 3.96 |
3322 | 3440 | 2.206576 | AAGGAAACCATGAGGCAGAC | 57.793 | 50.000 | 0.00 | 0.00 | 39.06 | 3.51 |
3330 | 3448 | 3.507622 | GGGAGACTTGAAAGGAAACCATG | 59.492 | 47.826 | 0.00 | 0.00 | 0.00 | 3.66 |
3400 | 3538 | 1.134580 | CACCCACATAGGAGCTCACTG | 60.135 | 57.143 | 17.19 | 11.58 | 41.22 | 3.66 |
3445 | 3589 | 0.615331 | AACGGCACCTGATCTGATGT | 59.385 | 50.000 | 0.38 | 0.00 | 0.00 | 3.06 |
3504 | 3648 | 1.002069 | AGGACTTTGGCCATCATGGA | 58.998 | 50.000 | 8.30 | 0.00 | 40.96 | 3.41 |
3577 | 3722 | 8.774586 | GTTTACGCAAGATATTGTCAATCCTAT | 58.225 | 33.333 | 0.07 | 0.00 | 43.62 | 2.57 |
3578 | 3723 | 7.766738 | TGTTTACGCAAGATATTGTCAATCCTA | 59.233 | 33.333 | 0.07 | 0.00 | 43.62 | 2.94 |
3579 | 3724 | 6.597672 | TGTTTACGCAAGATATTGTCAATCCT | 59.402 | 34.615 | 0.07 | 0.00 | 43.62 | 3.24 |
3580 | 3725 | 6.781138 | TGTTTACGCAAGATATTGTCAATCC | 58.219 | 36.000 | 0.07 | 0.00 | 43.62 | 3.01 |
3581 | 3726 | 8.575454 | GTTTGTTTACGCAAGATATTGTCAATC | 58.425 | 33.333 | 0.07 | 0.00 | 43.62 | 2.67 |
3582 | 3727 | 8.079203 | TGTTTGTTTACGCAAGATATTGTCAAT | 58.921 | 29.630 | 3.06 | 3.06 | 43.62 | 2.57 |
3679 | 3834 | 7.148272 | GCATGTGAGAGCTTCTTAATTCTTTCT | 60.148 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
3796 | 3951 | 7.316393 | TCCAACTCAGGATCCGATTAATATT | 57.684 | 36.000 | 5.98 | 0.00 | 31.23 | 1.28 |
3797 | 3952 | 6.935240 | TCCAACTCAGGATCCGATTAATAT | 57.065 | 37.500 | 5.98 | 0.00 | 31.23 | 1.28 |
3798 | 3953 | 6.740944 | TTCCAACTCAGGATCCGATTAATA | 57.259 | 37.500 | 5.98 | 0.00 | 37.56 | 0.98 |
3856 | 4016 | 1.268899 | ACGAGTCCAGTTTCTACACGG | 59.731 | 52.381 | 0.00 | 0.00 | 32.59 | 4.94 |
4001 | 4161 | 1.016130 | AAGCCACACGCGATCTTGAG | 61.016 | 55.000 | 15.93 | 0.00 | 44.76 | 3.02 |
4004 | 4164 | 2.680913 | GCAAGCCACACGCGATCTT | 61.681 | 57.895 | 15.93 | 5.18 | 44.76 | 2.40 |
4005 | 4165 | 3.121030 | GCAAGCCACACGCGATCT | 61.121 | 61.111 | 15.93 | 0.00 | 44.76 | 2.75 |
4007 | 4167 | 3.726517 | GTGCAAGCCACACGCGAT | 61.727 | 61.111 | 15.93 | 0.00 | 44.06 | 4.58 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.