Multiple sequence alignment - TraesCS2B01G244700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G244700 chr2B 100.000 5035 0 0 1 5035 248662068 248657034 0.000000e+00 9299.0
1 TraesCS2B01G244700 chr2B 93.750 176 9 2 1917 2090 342280952 342280777 3.870000e-66 263.0
2 TraesCS2B01G244700 chr2D 92.961 2401 108 22 2680 5035 191235480 191237864 0.000000e+00 3441.0
3 TraesCS2B01G244700 chr2D 93.615 877 33 8 670 1532 191233825 191234692 0.000000e+00 1288.0
4 TraesCS2B01G244700 chr2D 93.494 415 19 6 2095 2503 191235050 191235462 1.200000e-170 610.0
5 TraesCS2B01G244700 chr2D 89.058 329 18 11 1614 1926 191234718 191235044 4.730000e-105 392.0
6 TraesCS2B01G244700 chr2D 93.785 177 8 3 1922 2096 560959481 560959656 3.870000e-66 263.0
7 TraesCS2B01G244700 chr2D 92.778 180 10 3 1923 2099 632423751 632423572 1.800000e-64 257.0
8 TraesCS2B01G244700 chr2A 94.887 1506 53 12 2086 3577 206411884 206410389 0.000000e+00 2333.0
9 TraesCS2B01G244700 chr2A 91.451 1392 62 27 577 1927 206413257 206411882 0.000000e+00 1858.0
10 TraesCS2B01G244700 chr2A 92.948 865 31 13 3554 4406 206410278 206409432 0.000000e+00 1232.0
11 TraesCS2B01G244700 chr2A 90.390 666 32 10 4392 5035 206406424 206405769 0.000000e+00 846.0
12 TraesCS2B01G244700 chr7D 94.798 173 6 3 1920 2089 440561573 440561745 2.990000e-67 267.0
13 TraesCS2B01G244700 chr7B 94.798 173 6 3 1920 2089 458341460 458341632 2.990000e-67 267.0
14 TraesCS2B01G244700 chr4D 94.767 172 7 2 1924 2093 93338208 93338037 2.990000e-67 267.0
15 TraesCS2B01G244700 chr4D 93.750 176 8 3 1926 2099 75782053 75782227 1.390000e-65 261.0
16 TraesCS2B01G244700 chr3B 92.350 183 9 5 1926 2103 571752689 571752507 6.470000e-64 255.0
17 TraesCS2B01G244700 chr6B 88.406 207 18 6 1887 2088 11190667 11190462 1.400000e-60 244.0
18 TraesCS2B01G244700 chr6B 94.444 36 2 0 215 250 93840820 93840855 7.040000e-04 56.5
19 TraesCS2B01G244700 chr4B 77.654 179 34 5 92 268 588849089 588849263 2.480000e-18 104.0
20 TraesCS2B01G244700 chrUn 80.702 114 16 5 200 312 271414383 271414275 3.230000e-12 84.2
21 TraesCS2B01G244700 chr3A 90.196 51 3 2 442 492 228902130 228902178 1.170000e-06 65.8
22 TraesCS2B01G244700 chr7A 75.352 142 26 7 132 268 130395798 130395661 5.440000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G244700 chr2B 248657034 248662068 5034 True 9299.00 9299 100.000 1 5035 1 chr2B.!!$R1 5034
1 TraesCS2B01G244700 chr2D 191233825 191237864 4039 False 1432.75 3441 92.282 670 5035 4 chr2D.!!$F2 4365
2 TraesCS2B01G244700 chr2A 206405769 206413257 7488 True 1567.25 2333 92.419 577 5035 4 chr2A.!!$R1 4458

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
372 373 0.034186 ATGCTTCCGGCTCCAATTCA 60.034 50.000 0.0 0.0 42.39 2.57 F
946 971 0.105778 CATCTCCTCTTCCTTCGCCC 59.894 60.000 0.0 0.0 0.00 6.13 F
1603 1643 0.839946 AGCCAGAGGACAGTTTGTGT 59.160 50.000 0.0 0.0 44.49 3.72 F
1905 1963 1.067354 GGCCTCTGCAATGAAAGGTTG 60.067 52.381 0.0 0.0 40.13 3.77 F
3308 3382 1.067915 CCCCCAACAACTTGTATTGCG 60.068 52.381 0.0 0.0 32.47 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2201 2260 1.153549 GCTTCGTGCGATCTTCCCT 60.154 57.895 0.00 0.0 0.00 4.20 R
2274 2334 1.632589 TCAGGTGCTGCTGAACTAGA 58.367 50.000 0.00 0.0 0.00 2.43 R
3303 3377 1.464608 CGACAACATGAGGTTCGCAAT 59.535 47.619 0.00 0.0 37.72 3.56 R
3807 4028 2.294791 AGAATTCTCAGTAGGATCGGCG 59.705 50.000 0.88 0.0 0.00 6.46 R
4637 7922 0.179097 GACTAAGCCTGGAAGCGAGG 60.179 60.000 0.00 0.0 38.01 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 9.906660 CATAGTTATGCTTAACACAAAGGAAAA 57.093 29.630 20.80 0.00 40.20 2.29
62 63 8.528044 AAAAACCTATACTTTCACAGGAAACA 57.472 30.769 0.00 0.00 38.07 2.83
63 64 7.506328 AAACCTATACTTTCACAGGAAACAC 57.494 36.000 0.00 0.00 38.07 3.32
64 65 6.435292 ACCTATACTTTCACAGGAAACACT 57.565 37.500 0.00 0.00 38.07 3.55
65 66 6.465084 ACCTATACTTTCACAGGAAACACTC 58.535 40.000 0.00 0.00 38.07 3.51
66 67 6.270231 ACCTATACTTTCACAGGAAACACTCT 59.730 38.462 0.00 0.00 38.07 3.24
67 68 6.591834 CCTATACTTTCACAGGAAACACTCTG 59.408 42.308 0.00 0.00 38.07 3.35
68 69 4.222124 ACTTTCACAGGAAACACTCTGT 57.778 40.909 0.00 0.00 44.12 3.41
69 70 4.589908 ACTTTCACAGGAAACACTCTGTT 58.410 39.130 0.00 0.00 43.41 3.16
78 79 3.536956 AAACACTCTGTTTCTCGTGGA 57.463 42.857 0.00 0.00 46.61 4.02
79 80 2.802787 ACACTCTGTTTCTCGTGGAG 57.197 50.000 0.00 0.00 0.00 3.86
80 81 2.307768 ACACTCTGTTTCTCGTGGAGA 58.692 47.619 0.00 0.00 36.86 3.71
81 82 2.034812 ACACTCTGTTTCTCGTGGAGAC 59.965 50.000 0.00 0.00 38.51 3.36
82 83 2.034685 CACTCTGTTTCTCGTGGAGACA 59.965 50.000 0.00 5.01 38.51 3.41
95 96 2.803956 TGGAGACACATCCGTACTTCT 58.196 47.619 0.00 0.00 42.77 2.85
96 97 2.492088 TGGAGACACATCCGTACTTCTG 59.508 50.000 0.00 0.00 42.77 3.02
97 98 2.531206 GAGACACATCCGTACTTCTGC 58.469 52.381 0.00 0.00 0.00 4.26
98 99 1.135373 AGACACATCCGTACTTCTGCG 60.135 52.381 0.00 0.00 0.00 5.18
99 100 0.885879 ACACATCCGTACTTCTGCGA 59.114 50.000 0.00 0.00 0.00 5.10
100 101 1.271379 ACACATCCGTACTTCTGCGAA 59.729 47.619 0.00 0.00 0.00 4.70
101 102 2.288579 ACACATCCGTACTTCTGCGAAA 60.289 45.455 0.00 0.00 0.00 3.46
102 103 2.734606 CACATCCGTACTTCTGCGAAAA 59.265 45.455 0.00 0.00 0.00 2.29
103 104 2.993899 ACATCCGTACTTCTGCGAAAAG 59.006 45.455 0.00 0.00 0.00 2.27
104 105 2.806608 TCCGTACTTCTGCGAAAAGT 57.193 45.000 4.01 4.01 40.06 2.66
105 106 3.921119 TCCGTACTTCTGCGAAAAGTA 57.079 42.857 0.00 2.34 38.00 2.24
112 113 5.751243 ACTTCTGCGAAAAGTACAATTGT 57.249 34.783 16.68 16.68 35.25 2.71
113 114 5.510671 ACTTCTGCGAAAAGTACAATTGTG 58.489 37.500 21.42 3.43 35.25 3.33
114 115 5.065988 ACTTCTGCGAAAAGTACAATTGTGT 59.934 36.000 21.42 5.40 42.09 3.72
115 116 5.493133 TCTGCGAAAAGTACAATTGTGTT 57.507 34.783 21.42 11.32 39.30 3.32
116 117 5.885881 TCTGCGAAAAGTACAATTGTGTTT 58.114 33.333 21.42 16.27 39.30 2.83
117 118 5.968848 TCTGCGAAAAGTACAATTGTGTTTC 59.031 36.000 21.42 21.83 39.30 2.78
118 119 5.885881 TGCGAAAAGTACAATTGTGTTTCT 58.114 33.333 25.49 16.02 39.30 2.52
119 120 5.968848 TGCGAAAAGTACAATTGTGTTTCTC 59.031 36.000 25.49 21.85 39.30 2.87
120 121 5.113529 GCGAAAAGTACAATTGTGTTTCTCG 59.886 40.000 25.49 25.11 39.30 4.04
121 122 6.415702 CGAAAAGTACAATTGTGTTTCTCGA 58.584 36.000 25.49 6.15 39.30 4.04
122 123 6.902948 CGAAAAGTACAATTGTGTTTCTCGAA 59.097 34.615 25.49 5.59 39.30 3.71
123 124 7.427030 CGAAAAGTACAATTGTGTTTCTCGAAA 59.573 33.333 25.49 5.02 39.30 3.46
124 125 8.973835 AAAAGTACAATTGTGTTTCTCGAAAA 57.026 26.923 21.42 0.00 39.30 2.29
125 126 8.973835 AAAGTACAATTGTGTTTCTCGAAAAA 57.026 26.923 21.42 0.00 39.30 1.94
155 156 5.646467 CTTCCAAAAGAAGCACATGTTTG 57.354 39.130 0.00 0.00 45.38 2.93
156 157 3.456280 TCCAAAAGAAGCACATGTTTGC 58.544 40.909 0.00 0.00 43.34 3.68
163 164 3.806591 GCACATGTTTGCTGCTCAT 57.193 47.368 0.00 0.64 39.59 2.90
164 165 1.346365 GCACATGTTTGCTGCTCATG 58.654 50.000 21.34 21.34 42.86 3.07
165 166 1.990799 CACATGTTTGCTGCTCATGG 58.009 50.000 24.20 15.44 41.91 3.66
166 167 1.542472 CACATGTTTGCTGCTCATGGA 59.458 47.619 24.20 0.00 41.91 3.41
167 168 1.816835 ACATGTTTGCTGCTCATGGAG 59.183 47.619 24.20 10.26 41.91 3.86
168 169 1.134367 CATGTTTGCTGCTCATGGAGG 59.866 52.381 17.92 0.00 36.36 4.30
169 170 1.246056 TGTTTGCTGCTCATGGAGGC 61.246 55.000 0.00 0.00 31.89 4.70
170 171 1.075305 TTTGCTGCTCATGGAGGCA 59.925 52.632 0.00 8.21 36.94 4.75
171 172 1.246056 TTTGCTGCTCATGGAGGCAC 61.246 55.000 0.00 0.00 34.57 5.01
172 173 2.045634 GCTGCTCATGGAGGCACA 60.046 61.111 0.00 0.00 34.57 4.57
173 174 1.453379 GCTGCTCATGGAGGCACAT 60.453 57.895 0.00 0.00 34.57 3.21
174 175 0.179037 GCTGCTCATGGAGGCACATA 60.179 55.000 0.00 0.00 34.57 2.29
175 176 1.544982 GCTGCTCATGGAGGCACATAT 60.545 52.381 0.00 0.00 34.57 1.78
176 177 2.860009 CTGCTCATGGAGGCACATATT 58.140 47.619 0.00 0.00 34.57 1.28
177 178 3.220110 CTGCTCATGGAGGCACATATTT 58.780 45.455 0.00 0.00 34.57 1.40
178 179 3.216800 TGCTCATGGAGGCACATATTTC 58.783 45.455 0.00 0.00 33.23 2.17
179 180 3.117776 TGCTCATGGAGGCACATATTTCT 60.118 43.478 0.00 0.00 33.23 2.52
180 181 3.887716 GCTCATGGAGGCACATATTTCTT 59.112 43.478 0.00 0.00 0.00 2.52
181 182 4.340381 GCTCATGGAGGCACATATTTCTTT 59.660 41.667 0.00 0.00 0.00 2.52
182 183 5.506982 GCTCATGGAGGCACATATTTCTTTC 60.507 44.000 0.00 0.00 0.00 2.62
183 184 5.759059 TCATGGAGGCACATATTTCTTTCT 58.241 37.500 0.00 0.00 0.00 2.52
184 185 5.591472 TCATGGAGGCACATATTTCTTTCTG 59.409 40.000 0.00 0.00 0.00 3.02
185 186 3.696051 TGGAGGCACATATTTCTTTCTGC 59.304 43.478 0.00 0.00 0.00 4.26
186 187 3.242870 GGAGGCACATATTTCTTTCTGCG 60.243 47.826 0.00 0.00 0.00 5.18
187 188 3.609853 AGGCACATATTTCTTTCTGCGA 58.390 40.909 0.00 0.00 0.00 5.10
188 189 3.624861 AGGCACATATTTCTTTCTGCGAG 59.375 43.478 0.00 0.00 0.00 5.03
189 190 3.375299 GGCACATATTTCTTTCTGCGAGT 59.625 43.478 0.00 0.00 0.00 4.18
190 191 4.570772 GGCACATATTTCTTTCTGCGAGTA 59.429 41.667 0.00 0.00 0.00 2.59
191 192 5.277058 GGCACATATTTCTTTCTGCGAGTAG 60.277 44.000 0.00 0.00 0.00 2.57
202 203 3.403277 CGAGTAGCATGGCTGTGC 58.597 61.111 0.07 7.25 45.38 4.57
208 209 2.789917 GCATGGCTGTGCTTCTCG 59.210 61.111 7.96 0.00 41.82 4.04
209 210 2.758089 GCATGGCTGTGCTTCTCGG 61.758 63.158 7.96 0.00 41.82 4.63
210 211 1.078918 CATGGCTGTGCTTCTCGGA 60.079 57.895 0.00 0.00 0.00 4.55
211 212 0.674581 CATGGCTGTGCTTCTCGGAA 60.675 55.000 0.00 0.00 0.00 4.30
212 213 0.254178 ATGGCTGTGCTTCTCGGAAT 59.746 50.000 0.00 0.00 0.00 3.01
213 214 0.674581 TGGCTGTGCTTCTCGGAATG 60.675 55.000 0.00 0.00 0.00 2.67
214 215 0.391661 GGCTGTGCTTCTCGGAATGA 60.392 55.000 0.00 0.00 0.00 2.57
215 216 1.442769 GCTGTGCTTCTCGGAATGAA 58.557 50.000 0.00 0.00 0.00 2.57
216 217 1.806542 GCTGTGCTTCTCGGAATGAAA 59.193 47.619 0.00 0.00 0.00 2.69
217 218 2.226437 GCTGTGCTTCTCGGAATGAAAA 59.774 45.455 0.00 0.00 0.00 2.29
218 219 3.669023 GCTGTGCTTCTCGGAATGAAAAG 60.669 47.826 0.00 0.00 0.00 2.27
219 220 3.476552 TGTGCTTCTCGGAATGAAAAGT 58.523 40.909 0.00 0.00 0.00 2.66
220 221 3.882888 TGTGCTTCTCGGAATGAAAAGTT 59.117 39.130 0.00 0.00 0.00 2.66
221 222 4.222114 GTGCTTCTCGGAATGAAAAGTTG 58.778 43.478 0.00 0.00 0.00 3.16
222 223 3.882888 TGCTTCTCGGAATGAAAAGTTGT 59.117 39.130 0.00 0.00 0.00 3.32
223 224 4.222114 GCTTCTCGGAATGAAAAGTTGTG 58.778 43.478 0.00 0.00 0.00 3.33
224 225 3.896648 TCTCGGAATGAAAAGTTGTGC 57.103 42.857 0.00 0.00 0.00 4.57
225 226 3.476552 TCTCGGAATGAAAAGTTGTGCT 58.523 40.909 0.00 0.00 0.00 4.40
226 227 3.882888 TCTCGGAATGAAAAGTTGTGCTT 59.117 39.130 0.00 0.00 39.52 3.91
227 228 4.024048 TCTCGGAATGAAAAGTTGTGCTTC 60.024 41.667 0.00 0.00 36.17 3.86
228 229 3.004315 TCGGAATGAAAAGTTGTGCTTCC 59.996 43.478 0.00 0.00 36.17 3.46
229 230 3.243367 CGGAATGAAAAGTTGTGCTTCCA 60.243 43.478 0.00 0.00 36.17 3.53
230 231 4.559300 CGGAATGAAAAGTTGTGCTTCCAT 60.559 41.667 0.00 0.00 36.17 3.41
231 232 5.335583 CGGAATGAAAAGTTGTGCTTCCATA 60.336 40.000 0.00 0.00 36.17 2.74
232 233 6.454795 GGAATGAAAAGTTGTGCTTCCATAA 58.545 36.000 0.00 0.00 36.17 1.90
233 234 6.587608 GGAATGAAAAGTTGTGCTTCCATAAG 59.412 38.462 0.00 0.00 36.17 1.73
234 235 6.899393 ATGAAAAGTTGTGCTTCCATAAGA 57.101 33.333 0.00 0.00 36.17 2.10
235 236 6.707440 TGAAAAGTTGTGCTTCCATAAGAA 57.293 33.333 0.00 0.00 36.17 2.52
257 258 4.355543 GCACATATTTGCTTTCGGAAGA 57.644 40.909 7.92 0.00 39.59 2.87
258 259 4.346129 GCACATATTTGCTTTCGGAAGAG 58.654 43.478 7.92 0.00 39.61 2.85
259 260 4.094887 GCACATATTTGCTTTCGGAAGAGA 59.905 41.667 7.92 0.00 39.61 3.10
260 261 5.563842 CACATATTTGCTTTCGGAAGAGAC 58.436 41.667 7.92 0.00 43.69 3.36
261 262 5.122239 CACATATTTGCTTTCGGAAGAGACA 59.878 40.000 7.92 0.00 43.69 3.41
262 263 5.882557 ACATATTTGCTTTCGGAAGAGACAT 59.117 36.000 7.92 0.00 43.69 3.06
263 264 7.011389 CACATATTTGCTTTCGGAAGAGACATA 59.989 37.037 7.92 0.00 43.69 2.29
264 265 7.552687 ACATATTTGCTTTCGGAAGAGACATAA 59.447 33.333 7.92 0.00 43.69 1.90
265 266 8.562892 CATATTTGCTTTCGGAAGAGACATAAT 58.437 33.333 7.92 2.45 43.69 1.28
266 267 6.817765 TTTGCTTTCGGAAGAGACATAATT 57.182 33.333 7.92 0.00 43.69 1.40
267 268 5.801350 TGCTTTCGGAAGAGACATAATTG 57.199 39.130 7.92 0.00 43.69 2.32
268 269 5.245531 TGCTTTCGGAAGAGACATAATTGT 58.754 37.500 7.92 0.00 43.69 2.71
269 270 6.403049 TGCTTTCGGAAGAGACATAATTGTA 58.597 36.000 7.92 0.00 43.69 2.41
270 271 6.312918 TGCTTTCGGAAGAGACATAATTGTAC 59.687 38.462 7.92 0.00 43.69 2.90
271 272 6.535508 GCTTTCGGAAGAGACATAATTGTACT 59.464 38.462 7.92 0.00 43.69 2.73
272 273 7.064728 GCTTTCGGAAGAGACATAATTGTACTT 59.935 37.037 7.92 0.00 43.69 2.24
273 274 8.475331 TTTCGGAAGAGACATAATTGTACTTC 57.525 34.615 12.75 12.75 42.34 3.01
274 275 7.406031 TCGGAAGAGACATAATTGTACTTCT 57.594 36.000 17.00 4.56 42.50 2.85
275 276 7.481642 TCGGAAGAGACATAATTGTACTTCTC 58.518 38.462 17.00 7.64 42.50 2.87
276 277 6.415280 CGGAAGAGACATAATTGTACTTCTCG 59.585 42.308 17.00 15.33 42.50 4.04
277 278 7.481642 GGAAGAGACATAATTGTACTTCTCGA 58.518 38.462 17.00 0.00 42.50 4.04
278 279 7.974501 GGAAGAGACATAATTGTACTTCTCGAA 59.025 37.037 17.00 0.00 42.50 3.71
279 280 9.355215 GAAGAGACATAATTGTACTTCTCGAAA 57.645 33.333 13.38 0.00 41.25 3.46
280 281 9.706691 AAGAGACATAATTGTACTTCTCGAAAA 57.293 29.630 0.00 0.00 35.79 2.29
281 282 9.360093 AGAGACATAATTGTACTTCTCGAAAAG 57.640 33.333 0.00 0.00 35.79 2.27
282 283 8.480643 AGACATAATTGTACTTCTCGAAAAGG 57.519 34.615 3.10 0.00 35.79 3.11
283 284 8.311836 AGACATAATTGTACTTCTCGAAAAGGA 58.688 33.333 3.10 0.00 35.79 3.36
284 285 8.842358 ACATAATTGTACTTCTCGAAAAGGAA 57.158 30.769 3.10 0.00 33.16 3.36
285 286 9.280174 ACATAATTGTACTTCTCGAAAAGGAAA 57.720 29.630 3.10 0.00 33.16 3.13
305 306 3.837213 AAAATCATGTGCTTCCACGAG 57.163 42.857 0.00 0.00 45.04 4.18
306 307 2.768253 AATCATGTGCTTCCACGAGA 57.232 45.000 0.00 0.00 45.04 4.04
307 308 2.768253 ATCATGTGCTTCCACGAGAA 57.232 45.000 0.00 0.00 45.04 2.87
313 314 3.862124 CTTCCACGAGAAGCACGG 58.138 61.111 6.95 0.00 45.38 4.94
314 315 1.006102 CTTCCACGAGAAGCACGGT 60.006 57.895 6.95 0.00 45.38 4.83
315 316 0.600255 CTTCCACGAGAAGCACGGTT 60.600 55.000 6.95 0.00 45.38 4.44
316 317 0.675083 TTCCACGAGAAGCACGGTTA 59.325 50.000 0.00 0.00 34.93 2.85
317 318 0.892755 TCCACGAGAAGCACGGTTAT 59.107 50.000 0.00 0.00 34.93 1.89
318 319 0.999406 CCACGAGAAGCACGGTTATG 59.001 55.000 0.00 0.00 34.93 1.90
319 320 0.999406 CACGAGAAGCACGGTTATGG 59.001 55.000 0.00 0.00 34.93 2.74
320 321 0.606604 ACGAGAAGCACGGTTATGGT 59.393 50.000 0.00 0.00 34.93 3.55
321 322 1.001633 ACGAGAAGCACGGTTATGGTT 59.998 47.619 0.00 0.00 42.81 3.67
326 327 2.851263 AGCACGGTTATGGTTCTTGA 57.149 45.000 0.00 0.00 0.00 3.02
327 328 3.134574 AGCACGGTTATGGTTCTTGAA 57.865 42.857 0.00 0.00 0.00 2.69
328 329 3.482436 AGCACGGTTATGGTTCTTGAAA 58.518 40.909 0.00 0.00 0.00 2.69
329 330 3.886505 AGCACGGTTATGGTTCTTGAAAA 59.113 39.130 0.00 0.00 0.00 2.29
366 367 0.603065 AAAAACATGCTTCCGGCTCC 59.397 50.000 0.00 0.00 42.39 4.70
367 368 0.539438 AAAACATGCTTCCGGCTCCA 60.539 50.000 0.00 0.00 42.39 3.86
368 369 0.539438 AAACATGCTTCCGGCTCCAA 60.539 50.000 0.00 0.00 42.39 3.53
369 370 0.323725 AACATGCTTCCGGCTCCAAT 60.324 50.000 0.00 0.00 42.39 3.16
370 371 0.323725 ACATGCTTCCGGCTCCAATT 60.324 50.000 0.00 0.00 42.39 2.32
371 372 0.383231 CATGCTTCCGGCTCCAATTC 59.617 55.000 0.00 0.00 42.39 2.17
372 373 0.034186 ATGCTTCCGGCTCCAATTCA 60.034 50.000 0.00 0.00 42.39 2.57
373 374 0.034186 TGCTTCCGGCTCCAATTCAT 60.034 50.000 0.00 0.00 42.39 2.57
374 375 1.106285 GCTTCCGGCTCCAATTCATT 58.894 50.000 0.00 0.00 38.06 2.57
375 376 1.478105 GCTTCCGGCTCCAATTCATTT 59.522 47.619 0.00 0.00 38.06 2.32
376 377 2.094026 GCTTCCGGCTCCAATTCATTTT 60.094 45.455 0.00 0.00 38.06 1.82
377 378 3.514645 CTTCCGGCTCCAATTCATTTTG 58.485 45.455 0.00 0.00 0.00 2.44
378 379 2.801483 TCCGGCTCCAATTCATTTTGA 58.199 42.857 0.00 0.00 0.00 2.69
379 380 3.364549 TCCGGCTCCAATTCATTTTGAT 58.635 40.909 0.00 0.00 0.00 2.57
380 381 4.531854 TCCGGCTCCAATTCATTTTGATA 58.468 39.130 0.00 0.00 0.00 2.15
381 382 5.139727 TCCGGCTCCAATTCATTTTGATAT 58.860 37.500 0.00 0.00 0.00 1.63
382 383 5.598005 TCCGGCTCCAATTCATTTTGATATT 59.402 36.000 0.00 0.00 0.00 1.28
383 384 5.922544 CCGGCTCCAATTCATTTTGATATTC 59.077 40.000 0.00 0.00 0.00 1.75
384 385 6.239120 CCGGCTCCAATTCATTTTGATATTCT 60.239 38.462 0.00 0.00 0.00 2.40
385 386 7.205297 CGGCTCCAATTCATTTTGATATTCTT 58.795 34.615 0.00 0.00 0.00 2.52
386 387 7.707893 CGGCTCCAATTCATTTTGATATTCTTT 59.292 33.333 0.00 0.00 0.00 2.52
387 388 8.823818 GGCTCCAATTCATTTTGATATTCTTTG 58.176 33.333 0.00 0.00 0.00 2.77
388 389 9.374838 GCTCCAATTCATTTTGATATTCTTTGT 57.625 29.630 0.00 0.00 0.00 2.83
422 423 9.457436 AAGTTTGTCGAAACCTATTAATATGGT 57.543 29.630 9.53 9.53 42.25 3.55
426 427 8.975410 TGTCGAAACCTATTAATATGGTATCG 57.025 34.615 13.63 12.69 33.17 2.92
427 428 8.795513 TGTCGAAACCTATTAATATGGTATCGA 58.204 33.333 13.63 14.13 33.17 3.59
428 429 9.630098 GTCGAAACCTATTAATATGGTATCGAA 57.370 33.333 17.51 7.50 33.17 3.71
429 430 9.850628 TCGAAACCTATTAATATGGTATCGAAG 57.149 33.333 13.63 6.44 33.17 3.79
430 431 9.850628 CGAAACCTATTAATATGGTATCGAAGA 57.149 33.333 13.63 0.00 34.77 2.87
451 452 8.847444 GAAGATCTCGATTTAAATGCACAATT 57.153 30.769 5.17 0.00 0.00 2.32
452 453 9.294030 GAAGATCTCGATTTAAATGCACAATTT 57.706 29.630 5.17 0.00 41.47 1.82
457 458 9.773328 TCTCGATTTAAATGCACAATTTAAGAG 57.227 29.630 5.17 0.99 46.40 2.85
458 459 9.773328 CTCGATTTAAATGCACAATTTAAGAGA 57.227 29.630 5.17 7.97 46.40 3.10
514 515 9.807649 AAAAAGACTCTTAGTTACGACAAGTAA 57.192 29.630 0.00 0.00 42.56 2.24
524 525 3.015934 ACGACAAGTAACGCACATACA 57.984 42.857 0.00 0.00 0.00 2.29
525 526 2.984471 ACGACAAGTAACGCACATACAG 59.016 45.455 0.00 0.00 0.00 2.74
526 527 2.984471 CGACAAGTAACGCACATACAGT 59.016 45.455 0.00 0.00 0.00 3.55
527 528 6.344819 TACGACAAGTAACGCACATACAGTG 61.345 44.000 0.00 0.00 40.83 3.66
528 529 8.646414 TACGACAAGTAACGCACATACAGTGT 62.646 42.308 0.00 0.00 40.38 3.55
538 539 2.632377 ACATACAGTGTGCTACATGCC 58.368 47.619 5.88 0.00 40.28 4.40
539 540 2.027285 ACATACAGTGTGCTACATGCCA 60.027 45.455 5.88 0.00 40.28 4.92
540 541 2.385013 TACAGTGTGCTACATGCCAG 57.615 50.000 5.88 0.00 42.00 4.85
541 542 0.957395 ACAGTGTGCTACATGCCAGC 60.957 55.000 11.95 11.95 42.00 4.85
542 543 0.956902 CAGTGTGCTACATGCCAGCA 60.957 55.000 16.42 16.42 46.47 4.41
546 547 3.089788 TGCTACATGCCAGCATCTG 57.910 52.632 16.42 0.00 43.90 2.90
547 548 0.542805 TGCTACATGCCAGCATCTGA 59.457 50.000 16.42 0.00 43.90 3.27
548 549 1.227639 GCTACATGCCAGCATCTGAG 58.772 55.000 13.56 1.77 38.93 3.35
549 550 1.202615 GCTACATGCCAGCATCTGAGA 60.203 52.381 13.56 0.00 38.93 3.27
550 551 2.744166 GCTACATGCCAGCATCTGAGAA 60.744 50.000 13.56 0.00 38.93 2.87
551 552 2.039818 ACATGCCAGCATCTGAGAAG 57.960 50.000 1.19 0.00 33.90 2.85
552 553 1.558294 ACATGCCAGCATCTGAGAAGA 59.442 47.619 1.19 0.00 33.90 2.87
553 554 1.941294 CATGCCAGCATCTGAGAAGAC 59.059 52.381 1.19 0.00 33.90 3.01
554 555 0.108472 TGCCAGCATCTGAGAAGACG 60.108 55.000 0.00 0.00 32.44 4.18
555 556 0.809241 GCCAGCATCTGAGAAGACGG 60.809 60.000 0.00 0.00 32.44 4.79
556 557 0.179089 CCAGCATCTGAGAAGACGGG 60.179 60.000 0.00 0.00 32.44 5.28
557 558 0.820226 CAGCATCTGAGAAGACGGGA 59.180 55.000 0.00 0.00 32.44 5.14
558 559 0.820871 AGCATCTGAGAAGACGGGAC 59.179 55.000 0.00 0.00 0.00 4.46
559 560 0.820871 GCATCTGAGAAGACGGGACT 59.179 55.000 0.00 0.00 0.00 3.85
560 561 1.470632 GCATCTGAGAAGACGGGACTG 60.471 57.143 0.00 0.00 0.00 3.51
561 562 1.135915 CATCTGAGAAGACGGGACTGG 59.864 57.143 0.00 0.00 0.00 4.00
562 563 0.112606 TCTGAGAAGACGGGACTGGT 59.887 55.000 0.00 0.00 0.00 4.00
563 564 0.528470 CTGAGAAGACGGGACTGGTC 59.472 60.000 0.00 0.00 34.62 4.02
564 565 0.112606 TGAGAAGACGGGACTGGTCT 59.887 55.000 0.67 0.00 46.27 3.85
568 569 1.371558 AGACGGGACTGGTCTTTGC 59.628 57.895 0.67 0.00 41.83 3.68
569 570 1.070786 GACGGGACTGGTCTTTGCA 59.929 57.895 0.67 0.00 0.00 4.08
570 571 0.534203 GACGGGACTGGTCTTTGCAA 60.534 55.000 0.00 0.00 0.00 4.08
571 572 0.106918 ACGGGACTGGTCTTTGCAAA 60.107 50.000 12.14 12.14 0.00 3.68
572 573 1.028905 CGGGACTGGTCTTTGCAAAA 58.971 50.000 13.84 1.75 0.00 2.44
573 574 1.407258 CGGGACTGGTCTTTGCAAAAA 59.593 47.619 13.84 0.00 0.00 1.94
601 602 6.566197 AACTCTTAGCTTGTGATTTTGAGG 57.434 37.500 0.00 0.00 0.00 3.86
603 604 6.769512 ACTCTTAGCTTGTGATTTTGAGGTA 58.230 36.000 0.00 0.00 0.00 3.08
718 720 1.895707 AGCACAACAGTCAGCAGGC 60.896 57.895 0.00 0.00 0.00 4.85
748 757 5.048643 TCAAAAAGAAAAACAGTCACCGTGA 60.049 36.000 0.00 0.00 0.00 4.35
810 830 4.742659 GGCAAGCAAAGAAACGAATTAACA 59.257 37.500 0.00 0.00 0.00 2.41
866 886 5.761234 TGGTATAGTTATTTGGTTCCATCGC 59.239 40.000 0.00 0.00 0.00 4.58
933 958 4.024556 CACCGCATACATTTCTTCATCTCC 60.025 45.833 0.00 0.00 0.00 3.71
946 971 0.105778 CATCTCCTCTTCCTTCGCCC 59.894 60.000 0.00 0.00 0.00 6.13
948 973 2.687566 TCCTCTTCCTTCGCCCCC 60.688 66.667 0.00 0.00 0.00 5.40
984 1017 2.487762 CTCTCTCTCTCTCCACACACAC 59.512 54.545 0.00 0.00 0.00 3.82
985 1018 2.158608 TCTCTCTCTCTCCACACACACA 60.159 50.000 0.00 0.00 0.00 3.72
986 1019 1.957177 TCTCTCTCTCCACACACACAC 59.043 52.381 0.00 0.00 0.00 3.82
987 1020 1.683385 CTCTCTCTCCACACACACACA 59.317 52.381 0.00 0.00 0.00 3.72
988 1021 1.409064 TCTCTCTCCACACACACACAC 59.591 52.381 0.00 0.00 0.00 3.82
989 1022 1.136891 CTCTCTCCACACACACACACA 59.863 52.381 0.00 0.00 0.00 3.72
990 1023 1.134818 TCTCTCCACACACACACACAC 60.135 52.381 0.00 0.00 0.00 3.82
1033 1066 7.857569 TCTTTTGACGGTAATGTTCTTTACAG 58.142 34.615 9.59 8.27 40.83 2.74
1103 1139 1.014044 TACTTGCGCTGCTTCTTCGG 61.014 55.000 9.73 0.00 0.00 4.30
1218 1257 5.494632 TCCTCCTTTTCGAACAAAGAAAC 57.505 39.130 10.51 0.00 37.33 2.78
1336 1376 5.054477 CGGTCATACGTCCAAATCCTATTT 58.946 41.667 0.00 0.00 0.00 1.40
1360 1400 5.300792 TGTTGGAACTTTCAGTAAATGGGTC 59.699 40.000 0.00 0.00 0.00 4.46
1361 1401 4.403734 TGGAACTTTCAGTAAATGGGTCC 58.596 43.478 0.00 0.00 0.00 4.46
1378 1418 3.305335 GGGTCCAACTTGCAATTACTGTG 60.305 47.826 0.00 0.00 0.00 3.66
1405 1445 2.378445 TGATGCTTTCGATCAACCGA 57.622 45.000 0.00 0.00 36.70 4.69
1432 1472 5.350365 CGTAGGATTCTTTTGAAATGGACGA 59.650 40.000 0.00 0.00 42.31 4.20
1482 1522 2.347490 GGCGCCAGAACTCCAAGA 59.653 61.111 24.80 0.00 0.00 3.02
1603 1643 0.839946 AGCCAGAGGACAGTTTGTGT 59.160 50.000 0.00 0.00 44.49 3.72
1639 1679 5.903810 ACTGTAGAAAATCATCGTCCTACC 58.096 41.667 0.00 0.00 0.00 3.18
1743 1789 6.928979 TCAGGTAAATTTTGTTTCAGACGA 57.071 33.333 0.00 0.00 0.00 4.20
1753 1799 5.403897 TTGTTTCAGACGATTTCAGACAC 57.596 39.130 0.00 0.00 0.00 3.67
1756 1802 3.636282 TCAGACGATTTCAGACACGAA 57.364 42.857 0.00 0.00 0.00 3.85
1762 1808 3.982058 ACGATTTCAGACACGAACTCTTC 59.018 43.478 0.00 0.00 0.00 2.87
1764 1810 4.681942 CGATTTCAGACACGAACTCTTCTT 59.318 41.667 0.00 0.00 0.00 2.52
1765 1811 5.856986 CGATTTCAGACACGAACTCTTCTTA 59.143 40.000 0.00 0.00 0.00 2.10
1766 1812 6.362551 CGATTTCAGACACGAACTCTTCTTAA 59.637 38.462 0.00 0.00 0.00 1.85
1767 1813 7.096189 CGATTTCAGACACGAACTCTTCTTAAA 60.096 37.037 0.00 0.00 0.00 1.52
1768 1814 7.837202 TTTCAGACACGAACTCTTCTTAAAA 57.163 32.000 0.00 0.00 0.00 1.52
1769 1815 7.837202 TTCAGACACGAACTCTTCTTAAAAA 57.163 32.000 0.00 0.00 0.00 1.94
1808 1864 5.337652 GCCATCACCTTAGTCTCTAACTTGT 60.338 44.000 0.00 0.00 39.55 3.16
1809 1865 6.127423 GCCATCACCTTAGTCTCTAACTTGTA 60.127 42.308 0.00 0.00 39.55 2.41
1810 1866 7.259161 CCATCACCTTAGTCTCTAACTTGTAC 58.741 42.308 0.00 0.00 39.55 2.90
1850 1908 6.983906 AATTGATTCTTTCTTTCCACCTGT 57.016 33.333 0.00 0.00 0.00 4.00
1905 1963 1.067354 GGCCTCTGCAATGAAAGGTTG 60.067 52.381 0.00 0.00 40.13 3.77
1926 1984 6.235664 GTTGGAAGTCCATCCTTTACTTGTA 58.764 40.000 0.00 0.00 46.97 2.41
1927 1985 5.801380 TGGAAGTCCATCCTTTACTTGTAC 58.199 41.667 0.00 0.00 42.01 2.90
1928 1986 5.546499 TGGAAGTCCATCCTTTACTTGTACT 59.454 40.000 0.00 0.00 42.01 2.73
1929 1987 6.107343 GGAAGTCCATCCTTTACTTGTACTC 58.893 44.000 0.00 0.00 36.50 2.59
1930 1988 5.678955 AGTCCATCCTTTACTTGTACTCC 57.321 43.478 0.00 0.00 0.00 3.85
1931 1989 4.470304 AGTCCATCCTTTACTTGTACTCCC 59.530 45.833 0.00 0.00 0.00 4.30
1932 1990 4.470304 GTCCATCCTTTACTTGTACTCCCT 59.530 45.833 0.00 0.00 0.00 4.20
1933 1991 4.715297 TCCATCCTTTACTTGTACTCCCTC 59.285 45.833 0.00 0.00 0.00 4.30
1934 1992 4.141688 CCATCCTTTACTTGTACTCCCTCC 60.142 50.000 0.00 0.00 0.00 4.30
1935 1993 3.094572 TCCTTTACTTGTACTCCCTCCG 58.905 50.000 0.00 0.00 0.00 4.63
1936 1994 2.830321 CCTTTACTTGTACTCCCTCCGT 59.170 50.000 0.00 0.00 0.00 4.69
1937 1995 3.260128 CCTTTACTTGTACTCCCTCCGTT 59.740 47.826 0.00 0.00 0.00 4.44
1938 1996 4.492611 CTTTACTTGTACTCCCTCCGTTC 58.507 47.826 0.00 0.00 0.00 3.95
1939 1997 1.264295 ACTTGTACTCCCTCCGTTCC 58.736 55.000 0.00 0.00 0.00 3.62
1940 1998 1.203149 ACTTGTACTCCCTCCGTTCCT 60.203 52.381 0.00 0.00 0.00 3.36
1941 1999 2.042162 ACTTGTACTCCCTCCGTTCCTA 59.958 50.000 0.00 0.00 0.00 2.94
1942 2000 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
1943 2001 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
1944 2002 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
1945 2003 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
1946 2004 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
1947 2005 5.901276 TGTACTCCCTCCGTTCCTAAATATT 59.099 40.000 0.00 0.00 0.00 1.28
1948 2006 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
1949 2007 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
1950 2008 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
1951 2009 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
1952 2010 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
1953 2011 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
1954 2012 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
1955 2013 7.122204 CCCTCCGTTCCTAAATATTTGTCTTTT 59.878 37.037 11.05 0.00 0.00 2.27
1956 2014 9.169592 CCTCCGTTCCTAAATATTTGTCTTTTA 57.830 33.333 11.05 0.00 0.00 1.52
1958 2016 9.947433 TCCGTTCCTAAATATTTGTCTTTTAGA 57.053 29.630 11.05 0.00 35.79 2.10
1982 2040 8.450964 AGAGTTTTAAATGGACAATCACATACG 58.549 33.333 0.00 0.00 0.00 3.06
1983 2041 8.330466 AGTTTTAAATGGACAATCACATACGA 57.670 30.769 0.00 0.00 0.00 3.43
1984 2042 8.788806 AGTTTTAAATGGACAATCACATACGAA 58.211 29.630 0.00 0.00 0.00 3.85
1985 2043 9.567848 GTTTTAAATGGACAATCACATACGAAT 57.432 29.630 0.00 0.00 0.00 3.34
1986 2044 9.566530 TTTTAAATGGACAATCACATACGAATG 57.433 29.630 0.00 0.00 39.17 2.67
1988 2046 7.857734 AAATGGACAATCACATACGAATGTA 57.142 32.000 0.00 0.00 44.70 2.29
1989 2047 6.844696 ATGGACAATCACATACGAATGTAC 57.155 37.500 0.00 0.00 44.70 2.90
1990 2048 5.725362 TGGACAATCACATACGAATGTACA 58.275 37.500 0.00 0.00 44.70 2.90
1991 2049 6.345298 TGGACAATCACATACGAATGTACAT 58.655 36.000 1.41 1.41 44.70 2.29
1992 2050 7.493367 TGGACAATCACATACGAATGTACATA 58.507 34.615 9.21 0.00 44.70 2.29
1993 2051 7.651704 TGGACAATCACATACGAATGTACATAG 59.348 37.037 9.21 9.11 44.70 2.23
1994 2052 7.865889 GGACAATCACATACGAATGTACATAGA 59.134 37.037 9.21 0.00 44.70 1.98
1995 2053 8.575565 ACAATCACATACGAATGTACATAGAC 57.424 34.615 9.21 3.40 44.70 2.59
1996 2054 8.194769 ACAATCACATACGAATGTACATAGACA 58.805 33.333 9.21 1.57 44.70 3.41
1997 2055 9.196552 CAATCACATACGAATGTACATAGACAT 57.803 33.333 9.21 0.00 44.70 3.06
2026 2084 9.677567 TTTAAAGTGTAGATTCACTCATTTTGC 57.322 29.630 0.00 0.00 46.25 3.68
2027 2085 7.516198 AAAGTGTAGATTCACTCATTTTGCT 57.484 32.000 0.00 0.00 46.25 3.91
2028 2086 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2029 2087 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2030 2088 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2031 2089 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2032 2090 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2033 2091 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2034 2092 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2035 2093 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2036 2094 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2037 2095 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2038 2096 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2039 2097 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2040 2098 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
2041 2099 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
2042 2100 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
2043 2101 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
2044 2102 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
2045 2103 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
2046 2104 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
2047 2105 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
2048 2106 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
2049 2107 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
2050 2108 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
2051 2109 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
2052 2110 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
2053 2111 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
2054 2112 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
2055 2113 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
2056 2114 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
2057 2115 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
2058 2116 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
2059 2117 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
2060 2118 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
2061 2119 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
2062 2120 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
2063 2121 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
2064 2122 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
2065 2123 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
2066 2124 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
2082 2140 9.413734 AGAAAGACAAATATTTAGGAATGGAGG 57.586 33.333 0.00 0.00 0.00 4.30
2083 2141 8.539117 AAAGACAAATATTTAGGAATGGAGGG 57.461 34.615 0.00 0.00 0.00 4.30
2084 2142 7.465900 AGACAAATATTTAGGAATGGAGGGA 57.534 36.000 0.00 0.00 0.00 4.20
2085 2143 7.521669 AGACAAATATTTAGGAATGGAGGGAG 58.478 38.462 0.00 0.00 0.00 4.30
2086 2144 7.129504 AGACAAATATTTAGGAATGGAGGGAGT 59.870 37.037 0.00 0.00 0.00 3.85
2127 2185 5.772393 TTTCCTGACTGGTAATGTGGTAT 57.228 39.130 0.00 0.00 37.07 2.73
2135 2194 7.903145 TGACTGGTAATGTGGTATGATATACC 58.097 38.462 10.38 10.38 38.07 2.73
2149 2208 4.370917 TGATATACCCGGAGCGTTTAAAC 58.629 43.478 0.73 8.35 0.00 2.01
2201 2260 5.914898 TGGAGAAAGACATCGATGAAGTA 57.085 39.130 31.33 5.24 0.00 2.24
2312 2372 7.584987 CACCTGAATTAACCTGACTAAAACAG 58.415 38.462 0.00 0.00 35.43 3.16
2531 2596 8.630054 TGTTAGACAGCAAAACCATATAGTTT 57.370 30.769 0.00 0.00 41.67 2.66
2643 2708 5.698089 GGCGGACCTATACCAGTTTAATAAC 59.302 44.000 0.00 0.00 34.36 1.89
2668 2733 6.564873 CGAGCTAGTCCTCTTGTTTCAAAAAG 60.565 42.308 0.00 0.00 0.00 2.27
2763 2830 3.994204 ACCAACAAAAACGGTGATACC 57.006 42.857 0.00 0.00 34.05 2.73
2949 3016 3.764434 TCCAGCAAGAGTATCGAGAAGTT 59.236 43.478 0.00 0.00 42.67 2.66
2981 3048 2.569404 GGTTCTTCACAGGTCAGGAGAT 59.431 50.000 0.00 0.00 0.00 2.75
2986 3053 4.221703 TCTTCACAGGTCAGGAGATCTTTC 59.778 45.833 0.00 0.00 31.17 2.62
2990 3057 4.020751 CACAGGTCAGGAGATCTTTCTTCA 60.021 45.833 0.00 0.00 31.17 3.02
3116 3189 4.219115 TCTGATGAGGTGAGGATTCCTAC 58.781 47.826 4.86 4.69 31.76 3.18
3132 3205 7.499232 AGGATTCCTACTACATTTTGTACATGC 59.501 37.037 2.49 0.00 28.47 4.06
3171 3244 7.588488 GCATTTGTTTTTCTGAATTCAATGTGG 59.412 33.333 9.88 0.00 0.00 4.17
3180 3253 6.703319 TCTGAATTCAATGTGGCATGAAAAT 58.297 32.000 9.88 0.00 38.88 1.82
3224 3297 2.094757 TTGAGACCGGAAGCAGCGAA 62.095 55.000 9.46 0.00 0.00 4.70
3254 3327 4.335416 TCGAGAAGGCAATTCAAGGAATT 58.665 39.130 4.01 0.00 42.14 2.17
3303 3377 2.128535 TCTGTCCCCCAACAACTTGTA 58.871 47.619 0.00 0.00 0.00 2.41
3308 3382 1.067915 CCCCCAACAACTTGTATTGCG 60.068 52.381 0.00 0.00 32.47 4.85
3500 3575 4.274950 TCCGTTTAGCTCTTGGTCAAAAAG 59.725 41.667 0.00 0.00 0.00 2.27
3557 3774 5.980715 AGTTTGTCAAGTGTTTGTCGTTTTT 59.019 32.000 0.00 0.00 35.73 1.94
3558 3775 7.140048 AGTTTGTCAAGTGTTTGTCGTTTTTA 58.860 30.769 0.00 0.00 35.73 1.52
3570 3787 7.218583 TGTTTGTCGTTTTTATTTCGGTTTCTC 59.781 33.333 0.00 0.00 0.00 2.87
3807 4028 7.278646 ACATCTTTTCCTTTTGCTTTCTGTTTC 59.721 33.333 0.00 0.00 0.00 2.78
3905 4129 1.402613 GTAAACCACGTGCAAACTGGT 59.597 47.619 10.91 5.55 40.17 4.00
3975 4199 5.001874 AGTGCATGATGATCGCAATTATCT 58.998 37.500 0.00 0.00 37.41 1.98
4001 4225 2.036346 TCTCATCATCGCGGTGATCATT 59.964 45.455 31.15 9.88 36.72 2.57
4037 4261 1.532238 GCCTTGGGCTAAGTAGGGG 59.468 63.158 9.87 0.00 46.69 4.79
4138 4369 9.186837 CCTTTCTGATGTACTCCTACTACTTAA 57.813 37.037 0.00 0.00 0.00 1.85
4149 4380 4.024670 CCTACTACTTAACTGAGGGTGCT 58.975 47.826 0.00 0.00 0.00 4.40
4193 4424 7.636150 ACTTAGTTACTGTGATACGTATGGT 57.364 36.000 13.97 8.71 0.00 3.55
4199 4430 8.186821 AGTTACTGTGATACGTATGGTTAAGTC 58.813 37.037 13.97 0.00 0.00 3.01
4217 4448 2.278142 GCGATTTGGCATGCGACC 60.278 61.111 12.44 0.00 0.00 4.79
4288 4521 9.311916 CTCTAAGAACTTCATTGTCCTGATTAG 57.688 37.037 0.00 0.00 0.00 1.73
4292 4525 9.525826 AAGAACTTCATTGTCCTGATTAGAAAT 57.474 29.630 0.00 0.00 0.00 2.17
4357 4597 7.686438 TGCTTGTTTGAGTTGACATACATAT 57.314 32.000 0.00 0.00 33.42 1.78
4438 7700 4.007659 ACAGTTTACCCCGATTTGACATC 58.992 43.478 0.00 0.00 0.00 3.06
4521 7806 7.446319 CCAATTATATTTCCAGAGCTGATGTGA 59.554 37.037 0.00 0.00 0.00 3.58
4526 7811 0.900421 CCAGAGCTGATGTGACCTCA 59.100 55.000 0.00 0.00 0.00 3.86
4537 7822 0.169009 GTGACCTCATGCCGCTTTTC 59.831 55.000 0.00 0.00 0.00 2.29
4540 7825 1.541588 GACCTCATGCCGCTTTTCTTT 59.458 47.619 0.00 0.00 0.00 2.52
4576 7861 9.746457 ATCTTAGAGCTTTCTTCTTAACCAAAT 57.254 29.630 0.00 0.00 0.00 2.32
4577 7862 9.220767 TCTTAGAGCTTTCTTCTTAACCAAATC 57.779 33.333 0.00 0.00 0.00 2.17
4578 7863 8.918202 TTAGAGCTTTCTTCTTAACCAAATCA 57.082 30.769 0.00 0.00 0.00 2.57
4637 7922 3.365364 GCAAGAACATGTTGACTACTGCC 60.365 47.826 17.58 0.00 0.00 4.85
4641 7926 1.066858 ACATGTTGACTACTGCCCTCG 60.067 52.381 0.00 0.00 0.00 4.63
4708 7993 8.327429 CAAGCAACACCAAACATTTAGTTAAAG 58.673 33.333 0.00 0.00 40.26 1.85
4788 8078 6.932400 ACAAAACATGCATGAACAATTGAGAT 59.068 30.769 32.75 10.70 0.00 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 9.906660 TTTTCCTTTGTGTTAAGCATAACTATG 57.093 29.630 12.61 0.00 41.65 2.23
37 38 8.410912 GTGTTTCCTGTGAAAGTATAGGTTTTT 58.589 33.333 0.00 0.00 41.02 1.94
38 39 7.778382 AGTGTTTCCTGTGAAAGTATAGGTTTT 59.222 33.333 0.00 0.00 41.02 2.43
39 40 7.287810 AGTGTTTCCTGTGAAAGTATAGGTTT 58.712 34.615 0.00 0.00 41.02 3.27
40 41 6.838382 AGTGTTTCCTGTGAAAGTATAGGTT 58.162 36.000 0.00 0.00 41.02 3.50
41 42 6.270231 AGAGTGTTTCCTGTGAAAGTATAGGT 59.730 38.462 0.00 0.00 41.02 3.08
42 43 6.591834 CAGAGTGTTTCCTGTGAAAGTATAGG 59.408 42.308 0.00 0.00 41.02 2.57
43 44 7.155328 ACAGAGTGTTTCCTGTGAAAGTATAG 58.845 38.462 0.00 0.00 41.02 1.31
44 45 7.062749 ACAGAGTGTTTCCTGTGAAAGTATA 57.937 36.000 0.00 0.00 41.02 1.47
45 46 5.930135 ACAGAGTGTTTCCTGTGAAAGTAT 58.070 37.500 0.00 0.00 41.02 2.12
46 47 5.353394 ACAGAGTGTTTCCTGTGAAAGTA 57.647 39.130 0.00 0.00 41.02 2.24
47 48 4.222124 ACAGAGTGTTTCCTGTGAAAGT 57.778 40.909 0.00 0.00 41.02 2.66
48 49 5.567138 AAACAGAGTGTTTCCTGTGAAAG 57.433 39.130 0.00 0.00 46.61 2.62
59 60 2.693591 TCTCCACGAGAAACAGAGTGTT 59.306 45.455 0.00 0.00 43.41 3.32
60 61 2.034812 GTCTCCACGAGAAACAGAGTGT 59.965 50.000 0.00 0.00 40.59 3.55
61 62 2.034685 TGTCTCCACGAGAAACAGAGTG 59.965 50.000 0.00 0.00 40.59 3.51
62 63 2.034812 GTGTCTCCACGAGAAACAGAGT 59.965 50.000 7.03 0.00 44.05 3.24
63 64 2.667137 GTGTCTCCACGAGAAACAGAG 58.333 52.381 7.03 0.00 44.05 3.35
64 65 2.795175 GTGTCTCCACGAGAAACAGA 57.205 50.000 7.03 0.00 44.05 3.41
67 68 2.338500 GGATGTGTCTCCACGAGAAAC 58.662 52.381 5.21 5.21 44.66 2.78
68 69 1.067846 CGGATGTGTCTCCACGAGAAA 60.068 52.381 0.00 0.00 44.92 2.52
69 70 0.526211 CGGATGTGTCTCCACGAGAA 59.474 55.000 0.00 0.00 44.92 2.87
70 71 0.608308 ACGGATGTGTCTCCACGAGA 60.608 55.000 0.00 0.00 44.92 4.04
71 72 1.092348 TACGGATGTGTCTCCACGAG 58.908 55.000 0.00 0.00 44.92 4.18
72 73 0.806868 GTACGGATGTGTCTCCACGA 59.193 55.000 0.00 0.00 44.92 4.35
73 74 0.809385 AGTACGGATGTGTCTCCACG 59.191 55.000 0.00 0.00 44.92 4.94
74 75 2.492484 AGAAGTACGGATGTGTCTCCAC 59.508 50.000 0.00 0.00 42.19 4.02
75 76 2.492088 CAGAAGTACGGATGTGTCTCCA 59.508 50.000 0.00 0.00 34.78 3.86
76 77 2.735762 GCAGAAGTACGGATGTGTCTCC 60.736 54.545 0.00 0.00 0.00 3.71
77 78 2.531206 GCAGAAGTACGGATGTGTCTC 58.469 52.381 0.00 0.00 0.00 3.36
78 79 1.135373 CGCAGAAGTACGGATGTGTCT 60.135 52.381 0.00 0.00 0.00 3.41
79 80 1.135489 TCGCAGAAGTACGGATGTGTC 60.135 52.381 7.39 0.00 0.00 3.67
80 81 0.885879 TCGCAGAAGTACGGATGTGT 59.114 50.000 7.39 0.00 0.00 3.72
81 82 1.990799 TTCGCAGAAGTACGGATGTG 58.009 50.000 0.00 2.56 45.90 3.21
82 83 2.736144 TTTCGCAGAAGTACGGATGT 57.264 45.000 0.00 0.00 45.90 3.06
83 84 2.993899 ACTTTTCGCAGAAGTACGGATG 59.006 45.455 0.00 0.00 45.90 3.51
84 85 3.314541 ACTTTTCGCAGAAGTACGGAT 57.685 42.857 0.00 0.00 45.90 4.18
85 86 2.806608 ACTTTTCGCAGAAGTACGGA 57.193 45.000 0.00 0.00 45.90 4.69
86 87 3.967080 GTACTTTTCGCAGAAGTACGG 57.033 47.619 14.40 0.00 45.31 4.02
89 90 6.259167 ACACAATTGTACTTTTCGCAGAAGTA 59.741 34.615 11.53 0.85 36.17 2.24
90 91 5.065988 ACACAATTGTACTTTTCGCAGAAGT 59.934 36.000 11.53 0.00 36.17 3.01
91 92 5.510671 ACACAATTGTACTTTTCGCAGAAG 58.489 37.500 11.53 0.00 36.17 2.85
92 93 5.493133 ACACAATTGTACTTTTCGCAGAA 57.507 34.783 11.53 0.00 36.17 3.02
93 94 5.493133 AACACAATTGTACTTTTCGCAGA 57.507 34.783 11.53 0.00 33.55 4.26
94 95 5.971202 AGAAACACAATTGTACTTTTCGCAG 59.029 36.000 21.80 8.12 33.55 5.18
95 96 5.885881 AGAAACACAATTGTACTTTTCGCA 58.114 33.333 21.80 0.00 33.55 5.10
96 97 5.113529 CGAGAAACACAATTGTACTTTTCGC 59.886 40.000 21.36 21.17 33.55 4.70
97 98 6.415702 TCGAGAAACACAATTGTACTTTTCG 58.584 36.000 24.28 24.28 33.55 3.46
98 99 8.609478 TTTCGAGAAACACAATTGTACTTTTC 57.391 30.769 21.15 21.15 33.55 2.29
99 100 8.973835 TTTTCGAGAAACACAATTGTACTTTT 57.026 26.923 11.53 10.77 33.55 2.27
100 101 8.973835 TTTTTCGAGAAACACAATTGTACTTT 57.026 26.923 11.53 11.47 33.55 2.66
134 135 3.870419 GCAAACATGTGCTTCTTTTGGAA 59.130 39.130 0.00 0.00 41.51 3.53
135 136 3.456280 GCAAACATGTGCTTCTTTTGGA 58.544 40.909 0.00 0.00 41.51 3.53
136 137 3.865224 GCAAACATGTGCTTCTTTTGG 57.135 42.857 0.00 0.00 41.51 3.28
145 146 1.346365 CATGAGCAGCAAACATGTGC 58.654 50.000 0.00 0.00 45.28 4.57
146 147 1.542472 TCCATGAGCAGCAAACATGTG 59.458 47.619 18.87 13.27 39.47 3.21
147 148 1.816835 CTCCATGAGCAGCAAACATGT 59.183 47.619 18.87 0.00 39.47 3.21
148 149 1.134367 CCTCCATGAGCAGCAAACATG 59.866 52.381 15.65 15.65 40.39 3.21
149 150 1.471119 CCTCCATGAGCAGCAAACAT 58.529 50.000 0.00 0.00 0.00 2.71
150 151 1.246056 GCCTCCATGAGCAGCAAACA 61.246 55.000 0.00 0.00 0.00 2.83
151 152 1.246056 TGCCTCCATGAGCAGCAAAC 61.246 55.000 0.00 0.00 33.08 2.93
152 153 1.075305 TGCCTCCATGAGCAGCAAA 59.925 52.632 0.00 0.00 33.08 3.68
153 154 1.676635 GTGCCTCCATGAGCAGCAA 60.677 57.895 5.42 0.00 40.28 3.91
154 155 2.045634 GTGCCTCCATGAGCAGCA 60.046 61.111 5.42 1.10 40.28 4.41
155 156 0.179037 TATGTGCCTCCATGAGCAGC 60.179 55.000 5.42 0.00 40.28 5.25
156 157 2.563261 ATATGTGCCTCCATGAGCAG 57.437 50.000 5.42 0.00 40.28 4.24
157 158 3.117776 AGAAATATGTGCCTCCATGAGCA 60.118 43.478 0.00 0.00 36.44 4.26
158 159 3.484407 AGAAATATGTGCCTCCATGAGC 58.516 45.455 0.00 0.00 0.00 4.26
159 160 5.826737 AGAAAGAAATATGTGCCTCCATGAG 59.173 40.000 0.00 0.00 0.00 2.90
160 161 5.591472 CAGAAAGAAATATGTGCCTCCATGA 59.409 40.000 0.00 0.00 0.00 3.07
161 162 5.735354 GCAGAAAGAAATATGTGCCTCCATG 60.735 44.000 0.00 0.00 30.22 3.66
162 163 4.340381 GCAGAAAGAAATATGTGCCTCCAT 59.660 41.667 0.00 0.00 30.22 3.41
163 164 3.696051 GCAGAAAGAAATATGTGCCTCCA 59.304 43.478 0.00 0.00 30.22 3.86
164 165 3.242870 CGCAGAAAGAAATATGTGCCTCC 60.243 47.826 0.00 0.00 32.63 4.30
165 166 3.623060 TCGCAGAAAGAAATATGTGCCTC 59.377 43.478 0.00 0.00 32.63 4.70
166 167 3.609853 TCGCAGAAAGAAATATGTGCCT 58.390 40.909 0.00 0.00 32.63 4.75
167 168 3.375299 ACTCGCAGAAAGAAATATGTGCC 59.625 43.478 0.00 0.00 34.09 5.01
168 169 4.606457 ACTCGCAGAAAGAAATATGTGC 57.394 40.909 0.00 0.00 34.09 4.57
169 170 5.291858 TGCTACTCGCAGAAAGAAATATGTG 59.708 40.000 0.00 0.00 45.47 3.21
170 171 5.419542 TGCTACTCGCAGAAAGAAATATGT 58.580 37.500 0.00 0.00 45.47 2.29
171 172 5.973651 TGCTACTCGCAGAAAGAAATATG 57.026 39.130 0.00 0.00 45.47 1.78
184 185 2.817423 GCACAGCCATGCTACTCGC 61.817 63.158 2.57 0.00 42.62 5.03
185 186 3.403277 GCACAGCCATGCTACTCG 58.597 61.111 2.57 0.00 42.62 4.18
191 192 2.758089 CCGAGAAGCACAGCCATGC 61.758 63.158 1.51 1.51 46.50 4.06
192 193 0.674581 TTCCGAGAAGCACAGCCATG 60.675 55.000 0.00 0.00 0.00 3.66
193 194 0.254178 ATTCCGAGAAGCACAGCCAT 59.746 50.000 0.00 0.00 0.00 4.40
194 195 0.674581 CATTCCGAGAAGCACAGCCA 60.675 55.000 0.00 0.00 0.00 4.75
195 196 0.391661 TCATTCCGAGAAGCACAGCC 60.392 55.000 0.00 0.00 0.00 4.85
196 197 1.442769 TTCATTCCGAGAAGCACAGC 58.557 50.000 0.00 0.00 0.00 4.40
197 198 3.499918 ACTTTTCATTCCGAGAAGCACAG 59.500 43.478 0.00 0.00 39.02 3.66
198 199 3.476552 ACTTTTCATTCCGAGAAGCACA 58.523 40.909 0.00 0.00 39.02 4.57
199 200 4.222114 CAACTTTTCATTCCGAGAAGCAC 58.778 43.478 0.00 0.00 39.02 4.40
200 201 3.882888 ACAACTTTTCATTCCGAGAAGCA 59.117 39.130 0.00 0.00 39.02 3.91
201 202 4.222114 CACAACTTTTCATTCCGAGAAGC 58.778 43.478 0.00 0.00 39.02 3.86
202 203 4.023707 AGCACAACTTTTCATTCCGAGAAG 60.024 41.667 0.00 0.00 40.78 2.85
203 204 3.882888 AGCACAACTTTTCATTCCGAGAA 59.117 39.130 0.00 0.00 0.00 2.87
204 205 3.476552 AGCACAACTTTTCATTCCGAGA 58.523 40.909 0.00 0.00 0.00 4.04
205 206 3.904136 AGCACAACTTTTCATTCCGAG 57.096 42.857 0.00 0.00 0.00 4.63
206 207 3.004315 GGAAGCACAACTTTTCATTCCGA 59.996 43.478 0.00 0.00 39.29 4.55
207 208 3.243367 TGGAAGCACAACTTTTCATTCCG 60.243 43.478 0.00 0.00 39.29 4.30
208 209 4.320608 TGGAAGCACAACTTTTCATTCC 57.679 40.909 0.00 0.00 39.29 3.01
209 210 7.370383 TCTTATGGAAGCACAACTTTTCATTC 58.630 34.615 0.00 0.00 39.29 2.67
210 211 7.288810 TCTTATGGAAGCACAACTTTTCATT 57.711 32.000 0.00 0.00 39.29 2.57
211 212 6.899393 TCTTATGGAAGCACAACTTTTCAT 57.101 33.333 0.00 0.00 39.29 2.57
212 213 6.707440 TTCTTATGGAAGCACAACTTTTCA 57.293 33.333 0.00 0.00 39.29 2.69
236 237 4.094887 TCTCTTCCGAAAGCAAATATGTGC 59.905 41.667 10.09 10.09 45.28 4.57
237 238 5.122239 TGTCTCTTCCGAAAGCAAATATGTG 59.878 40.000 0.00 0.00 32.18 3.21
238 239 5.245531 TGTCTCTTCCGAAAGCAAATATGT 58.754 37.500 0.00 0.00 32.18 2.29
239 240 5.801350 TGTCTCTTCCGAAAGCAAATATG 57.199 39.130 0.00 0.00 32.18 1.78
240 241 8.682936 ATTATGTCTCTTCCGAAAGCAAATAT 57.317 30.769 0.00 0.00 32.18 1.28
241 242 8.397906 CAATTATGTCTCTTCCGAAAGCAAATA 58.602 33.333 0.00 0.00 32.18 1.40
242 243 7.094205 ACAATTATGTCTCTTCCGAAAGCAAAT 60.094 33.333 0.00 0.00 33.41 2.32
243 244 6.206634 ACAATTATGTCTCTTCCGAAAGCAAA 59.793 34.615 0.00 0.00 33.41 3.68
244 245 5.705441 ACAATTATGTCTCTTCCGAAAGCAA 59.295 36.000 0.00 0.00 33.41 3.91
245 246 5.245531 ACAATTATGTCTCTTCCGAAAGCA 58.754 37.500 0.00 0.00 33.41 3.91
246 247 5.803020 ACAATTATGTCTCTTCCGAAAGC 57.197 39.130 0.00 0.00 33.41 3.51
247 248 8.480643 AAGTACAATTATGTCTCTTCCGAAAG 57.519 34.615 0.00 0.00 41.05 2.62
248 249 8.311836 AGAAGTACAATTATGTCTCTTCCGAAA 58.688 33.333 16.05 0.00 43.64 3.46
249 250 7.837863 AGAAGTACAATTATGTCTCTTCCGAA 58.162 34.615 16.05 0.00 43.64 4.30
250 251 7.406031 AGAAGTACAATTATGTCTCTTCCGA 57.594 36.000 16.05 0.00 43.64 4.55
251 252 6.415280 CGAGAAGTACAATTATGTCTCTTCCG 59.585 42.308 16.05 15.17 43.64 4.30
252 253 7.481642 TCGAGAAGTACAATTATGTCTCTTCC 58.518 38.462 16.05 10.66 43.64 3.46
253 254 8.912787 TTCGAGAAGTACAATTATGTCTCTTC 57.087 34.615 13.75 13.75 43.33 2.87
254 255 9.706691 TTTTCGAGAAGTACAATTATGTCTCTT 57.293 29.630 0.00 0.00 41.05 2.85
255 256 9.360093 CTTTTCGAGAAGTACAATTATGTCTCT 57.640 33.333 7.52 0.00 41.05 3.10
256 257 8.596380 CCTTTTCGAGAAGTACAATTATGTCTC 58.404 37.037 14.01 0.00 41.05 3.36
257 258 8.311836 TCCTTTTCGAGAAGTACAATTATGTCT 58.688 33.333 14.01 0.00 41.05 3.41
258 259 8.475331 TCCTTTTCGAGAAGTACAATTATGTC 57.525 34.615 14.01 0.00 41.05 3.06
259 260 8.842358 TTCCTTTTCGAGAAGTACAATTATGT 57.158 30.769 14.01 0.00 43.74 2.29
284 285 3.820467 TCTCGTGGAAGCACATGATTTTT 59.180 39.130 0.00 0.00 35.95 1.94
285 286 3.411446 TCTCGTGGAAGCACATGATTTT 58.589 40.909 0.00 0.00 35.95 1.82
286 287 3.057969 TCTCGTGGAAGCACATGATTT 57.942 42.857 0.00 0.00 35.95 2.17
287 288 2.768253 TCTCGTGGAAGCACATGATT 57.232 45.000 0.00 0.00 35.95 2.57
288 289 2.625737 CTTCTCGTGGAAGCACATGAT 58.374 47.619 0.00 0.00 43.88 2.45
289 290 2.084610 CTTCTCGTGGAAGCACATGA 57.915 50.000 0.00 0.00 43.88 3.07
297 298 0.675083 TAACCGTGCTTCTCGTGGAA 59.325 50.000 0.00 0.00 0.00 3.53
298 299 0.892755 ATAACCGTGCTTCTCGTGGA 59.107 50.000 0.00 0.00 0.00 4.02
299 300 0.999406 CATAACCGTGCTTCTCGTGG 59.001 55.000 0.00 0.00 0.00 4.94
300 301 0.999406 CCATAACCGTGCTTCTCGTG 59.001 55.000 0.00 0.00 0.00 4.35
301 302 0.606604 ACCATAACCGTGCTTCTCGT 59.393 50.000 0.00 0.00 0.00 4.18
302 303 1.659098 GAACCATAACCGTGCTTCTCG 59.341 52.381 0.00 0.00 0.00 4.04
303 304 2.973945 AGAACCATAACCGTGCTTCTC 58.026 47.619 0.00 0.00 0.00 2.87
304 305 3.074412 CAAGAACCATAACCGTGCTTCT 58.926 45.455 0.00 0.00 25.56 2.85
305 306 3.071479 TCAAGAACCATAACCGTGCTTC 58.929 45.455 0.00 0.00 25.56 3.86
306 307 3.134574 TCAAGAACCATAACCGTGCTT 57.865 42.857 0.00 0.00 28.41 3.91
307 308 2.851263 TCAAGAACCATAACCGTGCT 57.149 45.000 0.00 0.00 0.00 4.40
308 309 3.907894 TTTCAAGAACCATAACCGTGC 57.092 42.857 0.00 0.00 0.00 5.34
309 310 5.682943 TCTTTTCAAGAACCATAACCGTG 57.317 39.130 0.00 0.00 33.83 4.94
310 311 6.702716 TTTCTTTTCAAGAACCATAACCGT 57.297 33.333 0.00 0.00 46.53 4.83
311 312 7.422399 TCTTTTCTTTTCAAGAACCATAACCG 58.578 34.615 0.00 0.00 46.53 4.44
312 313 9.594478 TTTCTTTTCTTTTCAAGAACCATAACC 57.406 29.630 0.00 0.00 46.53 2.85
315 316 9.801873 CAGTTTCTTTTCTTTTCAAGAACCATA 57.198 29.630 0.00 0.00 46.53 2.74
316 317 8.531146 TCAGTTTCTTTTCTTTTCAAGAACCAT 58.469 29.630 0.00 0.00 46.53 3.55
317 318 7.891561 TCAGTTTCTTTTCTTTTCAAGAACCA 58.108 30.769 0.00 0.00 46.53 3.67
318 319 8.757164 TTCAGTTTCTTTTCTTTTCAAGAACC 57.243 30.769 0.00 0.00 46.53 3.62
355 356 1.106285 AATGAATTGGAGCCGGAAGC 58.894 50.000 5.05 0.00 44.25 3.86
356 357 3.193267 TCAAAATGAATTGGAGCCGGAAG 59.807 43.478 5.05 0.00 0.00 3.46
357 358 3.161067 TCAAAATGAATTGGAGCCGGAA 58.839 40.909 5.05 0.00 0.00 4.30
358 359 2.801483 TCAAAATGAATTGGAGCCGGA 58.199 42.857 5.05 0.00 0.00 5.14
359 360 3.806625 ATCAAAATGAATTGGAGCCGG 57.193 42.857 0.00 0.00 0.00 6.13
360 361 6.742109 AGAATATCAAAATGAATTGGAGCCG 58.258 36.000 0.00 0.00 0.00 5.52
361 362 8.823818 CAAAGAATATCAAAATGAATTGGAGCC 58.176 33.333 0.00 0.00 0.00 4.70
362 363 9.374838 ACAAAGAATATCAAAATGAATTGGAGC 57.625 29.630 0.00 0.00 0.00 4.70
396 397 9.457436 ACCATATTAATAGGTTTCGACAAACTT 57.543 29.630 6.40 0.00 41.61 2.66
426 427 8.847444 AATTGTGCATTTAAATCGAGATCTTC 57.153 30.769 0.00 0.00 0.00 2.87
431 432 9.773328 CTCTTAAATTGTGCATTTAAATCGAGA 57.227 29.630 0.00 3.11 43.68 4.04
432 433 9.773328 TCTCTTAAATTGTGCATTTAAATCGAG 57.227 29.630 0.00 8.07 43.68 4.04
488 489 9.807649 TTACTTGTCGTAACTAAGAGTCTTTTT 57.192 29.630 11.40 7.59 33.28 1.94
501 502 9.627524 CACTGTATGTGCGTTACTTGTCGTAAC 62.628 44.444 5.21 5.21 43.59 2.50
502 503 4.544651 TGTATGTGCGTTACTTGTCGTAA 58.455 39.130 0.00 0.00 35.78 3.18
503 504 4.158020 TGTATGTGCGTTACTTGTCGTA 57.842 40.909 0.00 0.00 0.00 3.43
504 505 2.984471 CTGTATGTGCGTTACTTGTCGT 59.016 45.455 0.00 0.00 0.00 4.34
505 506 2.984471 ACTGTATGTGCGTTACTTGTCG 59.016 45.455 0.00 0.00 0.00 4.35
506 507 4.307834 CACTGTATGTGCGTTACTTGTC 57.692 45.455 0.00 0.00 40.06 3.18
520 521 5.505862 TGCTGGCATGTAGCACACTGTAT 62.506 47.826 18.73 0.00 45.52 2.29
521 522 4.252321 TGCTGGCATGTAGCACACTGTA 62.252 50.000 18.73 0.00 45.52 2.74
522 523 3.595517 TGCTGGCATGTAGCACACTGT 62.596 52.381 18.73 0.00 45.52 3.55
523 524 0.956902 TGCTGGCATGTAGCACACTG 60.957 55.000 18.73 0.00 45.52 3.66
524 525 1.376086 TGCTGGCATGTAGCACACT 59.624 52.632 18.73 0.00 45.52 3.55
525 526 3.985877 TGCTGGCATGTAGCACAC 58.014 55.556 18.73 0.00 45.52 3.82
529 530 1.202615 TCTCAGATGCTGGCATGTAGC 60.203 52.381 13.04 14.69 44.65 3.58
530 531 2.904697 TCTCAGATGCTGGCATGTAG 57.095 50.000 13.04 7.29 36.70 2.74
531 532 2.767960 TCTTCTCAGATGCTGGCATGTA 59.232 45.455 13.04 0.00 36.70 2.29
532 533 1.558294 TCTTCTCAGATGCTGGCATGT 59.442 47.619 13.04 6.08 36.70 3.21
533 534 1.941294 GTCTTCTCAGATGCTGGCATG 59.059 52.381 13.04 1.37 36.70 4.06
534 535 1.472904 CGTCTTCTCAGATGCTGGCAT 60.473 52.381 7.86 7.86 39.69 4.40
535 536 0.108472 CGTCTTCTCAGATGCTGGCA 60.108 55.000 0.00 0.00 31.51 4.92
536 537 0.809241 CCGTCTTCTCAGATGCTGGC 60.809 60.000 0.00 0.00 34.97 4.85
537 538 0.179089 CCCGTCTTCTCAGATGCTGG 60.179 60.000 0.00 0.00 34.97 4.85
538 539 0.820226 TCCCGTCTTCTCAGATGCTG 59.180 55.000 0.00 0.00 34.97 4.41
539 540 0.820871 GTCCCGTCTTCTCAGATGCT 59.179 55.000 0.00 0.00 34.97 3.79
540 541 0.820871 AGTCCCGTCTTCTCAGATGC 59.179 55.000 0.00 0.00 34.97 3.91
541 542 1.135915 CCAGTCCCGTCTTCTCAGATG 59.864 57.143 0.00 0.00 35.96 2.90
542 543 1.272760 ACCAGTCCCGTCTTCTCAGAT 60.273 52.381 0.00 0.00 0.00 2.90
543 544 0.112606 ACCAGTCCCGTCTTCTCAGA 59.887 55.000 0.00 0.00 0.00 3.27
544 545 0.528470 GACCAGTCCCGTCTTCTCAG 59.472 60.000 0.00 0.00 0.00 3.35
545 546 0.112606 AGACCAGTCCCGTCTTCTCA 59.887 55.000 0.00 0.00 37.28 3.27
546 547 1.258676 AAGACCAGTCCCGTCTTCTC 58.741 55.000 0.00 0.00 45.28 2.87
547 548 3.459386 AAGACCAGTCCCGTCTTCT 57.541 52.632 0.00 0.00 45.28 2.85
550 551 1.371558 GCAAAGACCAGTCCCGTCT 59.628 57.895 0.00 0.00 42.41 4.18
551 552 0.534203 TTGCAAAGACCAGTCCCGTC 60.534 55.000 0.00 0.00 0.00 4.79
552 553 0.106918 TTTGCAAAGACCAGTCCCGT 60.107 50.000 8.05 0.00 0.00 5.28
553 554 1.028905 TTTTGCAAAGACCAGTCCCG 58.971 50.000 12.41 0.00 0.00 5.14
575 576 8.734386 CCTCAAAATCACAAGCTAAGAGTTATT 58.266 33.333 0.00 0.00 0.00 1.40
610 611 1.202440 CCACCGCATAATGCAGCAAAT 60.202 47.619 0.00 0.00 45.36 2.32
637 639 2.572191 TACTCCCACATTAACGCTCG 57.428 50.000 0.00 0.00 0.00 5.03
647 649 1.005867 GTCGCGGTTTACTCCCACA 60.006 57.895 6.13 0.00 0.00 4.17
718 720 9.237846 GGTGACTGTTTTTCTTTTTGAGATAAG 57.762 33.333 0.00 0.00 33.49 1.73
748 757 1.300697 GCGTCTCCGTGGAAACAGT 60.301 57.895 0.00 0.00 44.46 3.55
810 830 8.113173 TGGGTTTAGTAAAAATTAACAGCGAT 57.887 30.769 0.00 0.00 0.00 4.58
886 911 2.028020 GGTGACTTTGGGAAGATCGTCT 60.028 50.000 8.59 0.00 36.69 4.18
950 975 2.370189 GAGAGAGAGAGAGAGAGAGGGG 59.630 59.091 0.00 0.00 0.00 4.79
984 1017 1.511850 TCATCTTGGCTTCGTGTGTG 58.488 50.000 0.00 0.00 0.00 3.82
985 1018 1.873591 GTTCATCTTGGCTTCGTGTGT 59.126 47.619 0.00 0.00 0.00 3.72
986 1019 1.872952 TGTTCATCTTGGCTTCGTGTG 59.127 47.619 0.00 0.00 0.00 3.82
987 1020 2.254546 TGTTCATCTTGGCTTCGTGT 57.745 45.000 0.00 0.00 0.00 4.49
988 1021 3.438087 AGATTGTTCATCTTGGCTTCGTG 59.562 43.478 0.00 0.00 39.47 4.35
989 1022 3.679389 AGATTGTTCATCTTGGCTTCGT 58.321 40.909 0.00 0.00 39.47 3.85
1047 1080 1.278985 ACCGCATCATCTTGGACAGAA 59.721 47.619 0.00 0.00 34.16 3.02
1103 1139 1.016653 GGCCGCTGACAGAGAGAAAC 61.017 60.000 6.65 0.00 0.00 2.78
1218 1257 5.981315 TGACACTAGTAGAAACCAAACGAAG 59.019 40.000 3.59 0.00 0.00 3.79
1360 1400 4.566545 TCACACAGTAATTGCAAGTTGG 57.433 40.909 4.05 0.00 0.00 3.77
1361 1401 5.978919 ACAATCACACAGTAATTGCAAGTTG 59.021 36.000 4.05 0.14 34.47 3.16
1378 1418 4.973396 TGATCGAAAGCATCAACAATCAC 58.027 39.130 0.00 0.00 0.00 3.06
1405 1445 7.414098 CGTCCATTTCAAAAGAATCCTACGATT 60.414 37.037 0.00 0.00 41.57 3.34
1432 1472 1.210885 CCTCTCCTTTGGGGGCTTCT 61.211 60.000 0.00 0.00 35.33 2.85
1454 1494 2.523168 TGGCGCCCCATCTCGATA 60.523 61.111 26.77 0.00 35.79 2.92
1482 1522 7.278868 GTCTTCGAGTCCATAATCTGATTTGTT 59.721 37.037 8.38 0.00 0.00 2.83
1526 1566 6.757237 ACTTTGATGCTCATGGACTAGATAG 58.243 40.000 0.00 0.00 0.00 2.08
1554 1594 5.105635 ACTGAGGTTGCCATCAAAATACATG 60.106 40.000 0.00 0.00 33.37 3.21
1639 1679 6.952935 ATCACGACAGCTTACTTTAAGAAG 57.047 37.500 0.00 0.00 38.02 2.85
1714 1760 9.936759 TCTGAAACAAAATTTACCTGAAGTTTT 57.063 25.926 0.00 0.00 37.42 2.43
1743 1789 8.433421 TTTTAAGAAGAGTTCGTGTCTGAAAT 57.567 30.769 0.00 0.00 34.02 2.17
1767 1813 8.374743 AGGTGATGGCAAAATGTAAGTATTTTT 58.625 29.630 0.00 0.00 37.97 1.94
1768 1814 7.906327 AGGTGATGGCAAAATGTAAGTATTTT 58.094 30.769 0.00 0.00 40.00 1.82
1769 1815 7.480760 AGGTGATGGCAAAATGTAAGTATTT 57.519 32.000 0.00 0.00 31.87 1.40
1770 1816 7.480760 AAGGTGATGGCAAAATGTAAGTATT 57.519 32.000 0.00 0.00 0.00 1.89
1774 1830 6.375455 AGACTAAGGTGATGGCAAAATGTAAG 59.625 38.462 0.00 0.00 0.00 2.34
1781 1837 5.248477 AGTTAGAGACTAAGGTGATGGCAAA 59.752 40.000 0.00 0.00 36.65 3.68
1831 1889 5.805728 TCCTACAGGTGGAAAGAAAGAATC 58.194 41.667 0.00 0.00 36.34 2.52
1850 1908 2.832838 TGACTCCTCATTGGCTTCCTA 58.167 47.619 0.00 0.00 35.26 2.94
1905 1963 6.051179 AGTACAAGTAAAGGATGGACTTCC 57.949 41.667 0.00 0.00 34.60 3.46
1926 1984 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
1927 1985 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
1928 1986 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
1929 1987 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
1930 1988 7.625828 AAAGACAAATATTTAGGAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
1932 1990 9.947433 TCTAAAAGACAAATATTTAGGAACGGA 57.053 29.630 0.00 0.00 37.29 4.69
1956 2014 8.450964 CGTATGTGATTGTCCATTTAAAACTCT 58.549 33.333 0.00 0.00 0.00 3.24
1957 2015 8.447833 TCGTATGTGATTGTCCATTTAAAACTC 58.552 33.333 0.00 0.00 0.00 3.01
1958 2016 8.330466 TCGTATGTGATTGTCCATTTAAAACT 57.670 30.769 0.00 0.00 0.00 2.66
1959 2017 8.958175 TTCGTATGTGATTGTCCATTTAAAAC 57.042 30.769 0.00 0.00 0.00 2.43
1960 2018 9.566530 CATTCGTATGTGATTGTCCATTTAAAA 57.433 29.630 0.00 0.00 0.00 1.52
1961 2019 8.735315 ACATTCGTATGTGATTGTCCATTTAAA 58.265 29.630 6.89 0.00 43.29 1.52
1962 2020 8.275015 ACATTCGTATGTGATTGTCCATTTAA 57.725 30.769 6.89 0.00 43.29 1.52
1963 2021 7.857734 ACATTCGTATGTGATTGTCCATTTA 57.142 32.000 6.89 0.00 43.29 1.40
1964 2022 6.757897 ACATTCGTATGTGATTGTCCATTT 57.242 33.333 6.89 0.00 43.29 2.32
1965 2023 6.821160 TGTACATTCGTATGTGATTGTCCATT 59.179 34.615 16.91 0.00 44.56 3.16
1966 2024 6.345298 TGTACATTCGTATGTGATTGTCCAT 58.655 36.000 16.91 0.00 44.56 3.41
1967 2025 5.725362 TGTACATTCGTATGTGATTGTCCA 58.275 37.500 16.91 1.20 44.56 4.02
1968 2026 6.844696 ATGTACATTCGTATGTGATTGTCC 57.155 37.500 16.91 0.00 44.56 4.02
1969 2027 8.691727 GTCTATGTACATTCGTATGTGATTGTC 58.308 37.037 14.77 5.39 44.56 3.18
1970 2028 8.194769 TGTCTATGTACATTCGTATGTGATTGT 58.805 33.333 14.77 2.71 44.56 2.71
1971 2029 8.574196 TGTCTATGTACATTCGTATGTGATTG 57.426 34.615 14.77 9.89 44.56 2.67
2006 2064 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2007 2065 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2008 2066 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2009 2067 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2010 2068 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2011 2069 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
2012 2070 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2013 2071 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2014 2072 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2015 2073 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2016 2074 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2017 2075 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
2018 2076 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
2019 2077 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
2020 2078 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
2021 2079 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
2022 2080 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
2023 2081 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
2024 2082 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
2025 2083 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
2026 2084 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
2027 2085 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
2028 2086 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
2029 2087 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
2030 2088 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
2032 2090 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
2033 2091 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
2034 2092 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
2035 2093 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
2036 2094 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
2037 2095 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
2038 2096 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
2039 2097 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
2040 2098 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
2056 2114 9.413734 CCTCCATTCCTAAATATTTGTCTTTCT 57.586 33.333 11.05 0.00 0.00 2.52
2057 2115 8.633561 CCCTCCATTCCTAAATATTTGTCTTTC 58.366 37.037 11.05 0.00 0.00 2.62
2058 2116 8.343787 TCCCTCCATTCCTAAATATTTGTCTTT 58.656 33.333 11.05 0.00 0.00 2.52
2059 2117 7.882755 TCCCTCCATTCCTAAATATTTGTCTT 58.117 34.615 11.05 0.00 0.00 3.01
2060 2118 7.129504 ACTCCCTCCATTCCTAAATATTTGTCT 59.870 37.037 11.05 0.00 0.00 3.41
2061 2119 7.290813 ACTCCCTCCATTCCTAAATATTTGTC 58.709 38.462 11.05 0.00 0.00 3.18
2062 2120 7.226059 ACTCCCTCCATTCCTAAATATTTGT 57.774 36.000 11.05 0.00 0.00 2.83
2068 2126 9.805204 ACATATATACTCCCTCCATTCCTAAAT 57.195 33.333 0.00 0.00 0.00 1.40
2070 2128 9.710818 GTACATATATACTCCCTCCATTCCTAA 57.289 37.037 0.00 0.00 0.00 2.69
2071 2129 9.081508 AGTACATATATACTCCCTCCATTCCTA 57.918 37.037 0.00 0.00 28.86 2.94
2072 2130 7.956357 AGTACATATATACTCCCTCCATTCCT 58.044 38.462 0.00 0.00 28.86 3.36
2073 2131 9.710818 TTAGTACATATATACTCCCTCCATTCC 57.289 37.037 0.00 0.00 36.74 3.01
2077 2135 8.978472 GCAATTAGTACATATATACTCCCTCCA 58.022 37.037 0.00 0.00 36.74 3.86
2078 2136 8.978472 TGCAATTAGTACATATATACTCCCTCC 58.022 37.037 0.00 0.00 36.74 4.30
2109 2167 8.035394 GGTATATCATACCACATTACCAGTCAG 58.965 40.741 9.93 0.00 37.53 3.51
2113 2171 6.338146 CGGGTATATCATACCACATTACCAG 58.662 44.000 15.42 0.00 39.31 4.00
2127 2185 4.370917 GTTTAAACGCTCCGGGTATATCA 58.629 43.478 0.00 0.00 0.00 2.15
2149 2208 1.944709 TGATTGCTGGAAGATGCATCG 59.055 47.619 20.67 7.56 39.07 3.84
2201 2260 1.153549 GCTTCGTGCGATCTTCCCT 60.154 57.895 0.00 0.00 0.00 4.20
2274 2334 1.632589 TCAGGTGCTGCTGAACTAGA 58.367 50.000 0.00 0.00 0.00 2.43
2297 2357 4.881850 CCTGAACACTGTTTTAGTCAGGTT 59.118 41.667 14.94 0.00 41.03 3.50
2312 2372 2.919228 AGGTGAGTGAAACCTGAACAC 58.081 47.619 0.00 0.00 46.51 3.32
2491 2556 4.100344 TGTCTAACAAGTTGTCCTAGCACA 59.900 41.667 9.40 10.97 0.00 4.57
2531 2596 7.182026 TGGAGGGTCAGTATTTTCAGAGATTAA 59.818 37.037 0.00 0.00 0.00 1.40
2532 2597 6.672218 TGGAGGGTCAGTATTTTCAGAGATTA 59.328 38.462 0.00 0.00 0.00 1.75
2540 2605 4.640647 GGTCATTGGAGGGTCAGTATTTTC 59.359 45.833 0.00 0.00 0.00 2.29
2643 2708 3.577649 TGAAACAAGAGGACTAGCTCG 57.422 47.619 0.00 0.00 0.00 5.03
2672 2737 9.877178 TTTTGGACTAGCTCATTTTTGTTTTTA 57.123 25.926 0.00 0.00 0.00 1.52
2673 2738 8.785329 TTTTGGACTAGCTCATTTTTGTTTTT 57.215 26.923 0.00 0.00 0.00 1.94
2674 2739 8.962884 ATTTTGGACTAGCTCATTTTTGTTTT 57.037 26.923 0.00 0.00 0.00 2.43
2675 2740 8.203485 TGATTTTGGACTAGCTCATTTTTGTTT 58.797 29.630 0.00 0.00 0.00 2.83
2676 2741 7.725251 TGATTTTGGACTAGCTCATTTTTGTT 58.275 30.769 0.00 0.00 0.00 2.83
2677 2742 7.288810 TGATTTTGGACTAGCTCATTTTTGT 57.711 32.000 0.00 0.00 0.00 2.83
2678 2743 8.767478 AATGATTTTGGACTAGCTCATTTTTG 57.233 30.769 0.00 0.00 31.21 2.44
2679 2744 9.783081 AAAATGATTTTGGACTAGCTCATTTTT 57.217 25.926 12.72 2.07 44.55 1.94
2763 2830 4.740268 TGCAATCATCAAAAGCTAGCAAG 58.260 39.130 18.83 3.40 0.00 4.01
2949 3016 4.443457 CCTGTGAAGAACCTTCTCTCAACA 60.443 45.833 8.02 3.39 36.28 3.33
2981 3048 7.933577 ACGAGGATAATGCATTATGAAGAAAGA 59.066 33.333 31.58 5.22 33.37 2.52
2986 3053 5.410746 AGCACGAGGATAATGCATTATGAAG 59.589 40.000 31.58 21.54 41.97 3.02
2990 3057 4.898320 TCAGCACGAGGATAATGCATTAT 58.102 39.130 27.95 27.95 41.97 1.28
3002 3069 6.219473 ACTGAAATTATAGATCAGCACGAGG 58.781 40.000 4.36 0.00 43.41 4.63
3153 3226 6.099159 TCATGCCACATTGAATTCAGAAAA 57.901 33.333 8.41 0.00 0.00 2.29
3171 3244 8.158169 TCAATCACCTAGTCATATTTTCATGC 57.842 34.615 0.00 0.00 0.00 4.06
3180 3253 8.727100 ATCAGGTTATCAATCACCTAGTCATA 57.273 34.615 0.00 0.00 41.86 2.15
3224 3297 3.902881 ATTGCCTTCTCGAAGATCTGT 57.097 42.857 8.19 0.00 40.79 3.41
3303 3377 1.464608 CGACAACATGAGGTTCGCAAT 59.535 47.619 0.00 0.00 37.72 3.56
3308 3382 2.989840 CAGACTCGACAACATGAGGTTC 59.010 50.000 0.00 0.00 37.72 3.62
3500 3575 5.491635 ACAAAGCTCTCTGAAGTTTTGAC 57.508 39.130 22.50 0.00 45.13 3.18
3570 3787 2.492088 TGAAGACAGTACATCAGACCGG 59.508 50.000 0.00 0.00 0.00 5.28
3608 3825 5.642063 TCTTGATTTTGGACCAACGATCTAC 59.358 40.000 21.64 7.24 0.00 2.59
3807 4028 2.294791 AGAATTCTCAGTAGGATCGGCG 59.705 50.000 0.88 0.00 0.00 6.46
3975 4199 0.108186 ACCGCGATGATGAGAAGCAA 60.108 50.000 8.23 0.00 0.00 3.91
4100 4331 1.417517 TCAGAAAGGCTCACTGCAAGA 59.582 47.619 13.59 0.00 45.15 3.02
4138 4369 7.961326 ATAAATGATTAAAAGCACCCTCAGT 57.039 32.000 0.00 0.00 0.00 3.41
4179 4410 4.353737 GCGACTTAACCATACGTATCACA 58.646 43.478 4.74 0.00 0.00 3.58
4193 4424 1.202132 GCATGCCAAATCGCGACTTAA 60.202 47.619 12.93 0.00 0.00 1.85
4217 4448 8.732531 TGGTTCCACCTTATAGATTTAAAAACG 58.267 33.333 0.00 0.00 39.58 3.60
4357 4597 9.528018 GGACAAGTCAATTTTTATTGAAACTCA 57.472 29.630 2.29 0.00 41.61 3.41
4369 4609 7.169645 CGTCAATGAATTGGACAAGTCAATTTT 59.830 33.333 17.45 6.64 46.41 1.82
4370 4610 6.642131 CGTCAATGAATTGGACAAGTCAATTT 59.358 34.615 17.45 7.26 46.41 1.82
4380 4620 3.334691 TCAGGTCGTCAATGAATTGGAC 58.665 45.455 3.31 4.10 38.30 4.02
4390 4630 2.035449 ACGATGTCTTTCAGGTCGTCAA 59.965 45.455 0.00 0.00 41.11 3.18
4438 7700 6.906157 ATTATGTTAGGCTCCAATTGGATG 57.094 37.500 27.20 20.43 44.46 3.51
4521 7806 1.620822 AAAGAAAAGCGGCATGAGGT 58.379 45.000 1.45 0.00 0.00 3.85
4526 7811 4.799564 TTGGATAAAAGAAAAGCGGCAT 57.200 36.364 1.45 0.00 0.00 4.40
4571 7856 7.651027 AGGTTGAGAAGGAATAATGATTTGG 57.349 36.000 0.00 0.00 0.00 3.28
4574 7859 9.129532 GATGAAGGTTGAGAAGGAATAATGATT 57.870 33.333 0.00 0.00 0.00 2.57
4575 7860 8.277197 TGATGAAGGTTGAGAAGGAATAATGAT 58.723 33.333 0.00 0.00 0.00 2.45
4576 7861 7.554118 GTGATGAAGGTTGAGAAGGAATAATGA 59.446 37.037 0.00 0.00 0.00 2.57
4577 7862 7.337689 TGTGATGAAGGTTGAGAAGGAATAATG 59.662 37.037 0.00 0.00 0.00 1.90
4578 7863 7.405292 TGTGATGAAGGTTGAGAAGGAATAAT 58.595 34.615 0.00 0.00 0.00 1.28
4637 7922 0.179097 GACTAAGCCTGGAAGCGAGG 60.179 60.000 0.00 0.00 38.01 4.63
4641 7926 0.905357 TCTGGACTAAGCCTGGAAGC 59.095 55.000 0.00 0.00 0.00 3.86
4805 8095 9.330063 TGCCATTAAATCTTAATCTAGTGACTG 57.670 33.333 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.