Multiple sequence alignment - TraesCS2B01G243300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G243300 chr2B 100.000 3320 0 0 1 3320 247558939 247562258 0.000000e+00 6131.0
1 TraesCS2B01G243300 chr2D 96.891 1544 47 1 792 2335 190436872 190438414 0.000000e+00 2584.0
2 TraesCS2B01G243300 chr2D 77.637 948 200 10 2377 3318 13031318 13030377 1.730000e-157 566.0
3 TraesCS2B01G243300 chr2D 86.705 173 22 1 346 517 190436542 190436714 1.220000e-44 191.0
4 TraesCS2B01G243300 chr2A 93.973 1543 59 8 792 2333 204992917 204994426 0.000000e+00 2303.0
5 TraesCS2B01G243300 chr2A 90.486 946 89 1 2374 3318 771798313 771799258 0.000000e+00 1247.0
6 TraesCS2B01G243300 chr2A 81.911 293 29 8 346 614 204992592 204992884 3.330000e-55 226.0
7 TraesCS2B01G243300 chr2A 94.872 39 2 0 340 378 722244704 722244666 9.950000e-06 62.1
8 TraesCS2B01G243300 chr5B 90.774 943 85 2 2377 3318 686779577 686778636 0.000000e+00 1258.0
9 TraesCS2B01G243300 chr5B 89.725 944 97 0 2375 3318 401663627 401664570 0.000000e+00 1206.0
10 TraesCS2B01G243300 chr5B 78.750 160 27 7 1267 1424 411757716 411757870 2.110000e-17 100.0
11 TraesCS2B01G243300 chr5B 86.420 81 5 6 1285 1362 635808601 635808524 2.120000e-12 84.2
12 TraesCS2B01G243300 chr3B 90.285 947 89 3 2374 3318 81302432 81301487 0.000000e+00 1236.0
13 TraesCS2B01G243300 chr6B 87.949 946 101 8 2374 3318 49988906 49987973 0.000000e+00 1103.0
14 TraesCS2B01G243300 chr6B 85.822 663 88 5 2437 3096 630868481 630869140 0.000000e+00 699.0
15 TraesCS2B01G243300 chr1D 82.489 948 159 5 2375 3318 335362101 335361157 0.000000e+00 824.0
16 TraesCS2B01G243300 chr1D 81.998 811 142 3 2376 3184 476669077 476668269 0.000000e+00 686.0
17 TraesCS2B01G243300 chr1D 91.304 46 4 0 344 389 162449968 162449923 2.770000e-06 63.9
18 TraesCS2B01G243300 chr1D 97.143 35 1 0 343 377 61969323 61969289 3.580000e-05 60.2
19 TraesCS2B01G243300 chr1D 100.000 29 0 0 488 516 493815566 493815538 2.000000e-03 54.7
20 TraesCS2B01G243300 chr6D 85.714 105 14 1 413 516 411505662 411505558 3.500000e-20 110.0
21 TraesCS2B01G243300 chr5D 79.375 160 26 7 1267 1424 350703977 350704131 4.530000e-19 106.0
22 TraesCS2B01G243300 chr5D 87.342 79 5 4 1283 1359 350676207 350676282 5.900000e-13 86.1
23 TraesCS2B01G243300 chr5D 86.420 81 5 6 1285 1362 505818469 505818392 2.120000e-12 84.2
24 TraesCS2B01G243300 chr5A 79.375 160 26 7 1267 1424 451248292 451248446 4.530000e-19 106.0
25 TraesCS2B01G243300 chr5A 87.342 79 5 4 1283 1359 451138377 451138452 5.900000e-13 86.1
26 TraesCS2B01G243300 chr1B 94.595 37 2 0 344 380 230033483 230033519 1.290000e-04 58.4
27 TraesCS2B01G243300 chr4D 92.105 38 3 0 346 383 6761236 6761273 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G243300 chr2B 247558939 247562258 3319 False 6131.0 6131 100.000 1 3320 1 chr2B.!!$F1 3319
1 TraesCS2B01G243300 chr2D 190436542 190438414 1872 False 1387.5 2584 91.798 346 2335 2 chr2D.!!$F1 1989
2 TraesCS2B01G243300 chr2D 13030377 13031318 941 True 566.0 566 77.637 2377 3318 1 chr2D.!!$R1 941
3 TraesCS2B01G243300 chr2A 204992592 204994426 1834 False 1264.5 2303 87.942 346 2333 2 chr2A.!!$F2 1987
4 TraesCS2B01G243300 chr2A 771798313 771799258 945 False 1247.0 1247 90.486 2374 3318 1 chr2A.!!$F1 944
5 TraesCS2B01G243300 chr5B 686778636 686779577 941 True 1258.0 1258 90.774 2377 3318 1 chr5B.!!$R2 941
6 TraesCS2B01G243300 chr5B 401663627 401664570 943 False 1206.0 1206 89.725 2375 3318 1 chr5B.!!$F1 943
7 TraesCS2B01G243300 chr3B 81301487 81302432 945 True 1236.0 1236 90.285 2374 3318 1 chr3B.!!$R1 944
8 TraesCS2B01G243300 chr6B 49987973 49988906 933 True 1103.0 1103 87.949 2374 3318 1 chr6B.!!$R1 944
9 TraesCS2B01G243300 chr6B 630868481 630869140 659 False 699.0 699 85.822 2437 3096 1 chr6B.!!$F1 659
10 TraesCS2B01G243300 chr1D 335361157 335362101 944 True 824.0 824 82.489 2375 3318 1 chr1D.!!$R3 943
11 TraesCS2B01G243300 chr1D 476668269 476669077 808 True 686.0 686 81.998 2376 3184 1 chr1D.!!$R4 808


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
346 347 0.036010 CCCTCTCGCTTGACCATGTT 60.036 55.0 0.0 0.0 0.0 2.71 F
746 796 0.106167 GGCCCCCACTTCCCTAATTC 60.106 60.0 0.0 0.0 0.0 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2301 2352 0.382158 CCTAGAGCTCGTCGCATTCA 59.618 55.0 8.37 0.00 42.61 2.57 R
2354 2405 0.107017 ACACAGGTGCATATGAGCCC 60.107 55.0 6.97 2.24 0.00 5.19 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.738521 GCGCCGCTGAACAGAGAA 60.739 61.111 0.00 0.00 0.00 2.87
20 21 2.103042 GCGCCGCTGAACAGAGAAT 61.103 57.895 0.00 0.00 0.00 2.40
21 22 1.639298 GCGCCGCTGAACAGAGAATT 61.639 55.000 0.00 0.00 0.00 2.17
22 23 0.095935 CGCCGCTGAACAGAGAATTG 59.904 55.000 5.97 0.00 0.00 2.32
23 24 0.179179 GCCGCTGAACAGAGAATTGC 60.179 55.000 5.97 0.00 0.00 3.56
24 25 1.446907 CCGCTGAACAGAGAATTGCT 58.553 50.000 5.97 0.00 0.00 3.91
25 26 1.396301 CCGCTGAACAGAGAATTGCTC 59.604 52.381 5.97 0.00 44.29 4.26
26 27 1.396301 CGCTGAACAGAGAATTGCTCC 59.604 52.381 5.97 0.00 45.10 4.70
27 28 2.430465 GCTGAACAGAGAATTGCTCCA 58.570 47.619 5.97 0.00 45.10 3.86
28 29 2.816087 GCTGAACAGAGAATTGCTCCAA 59.184 45.455 5.97 0.00 45.10 3.53
29 30 3.254166 GCTGAACAGAGAATTGCTCCAAA 59.746 43.478 5.97 0.00 45.10 3.28
30 31 4.082354 GCTGAACAGAGAATTGCTCCAAAT 60.082 41.667 5.97 0.00 45.10 2.32
31 32 5.633830 TGAACAGAGAATTGCTCCAAATC 57.366 39.130 0.00 0.00 45.10 2.17
32 33 5.319453 TGAACAGAGAATTGCTCCAAATCT 58.681 37.500 0.00 0.00 45.10 2.40
33 34 5.771666 TGAACAGAGAATTGCTCCAAATCTT 59.228 36.000 0.00 0.00 45.10 2.40
34 35 5.893897 ACAGAGAATTGCTCCAAATCTTC 57.106 39.130 0.00 0.00 45.10 2.87
35 36 5.319453 ACAGAGAATTGCTCCAAATCTTCA 58.681 37.500 0.00 0.00 45.10 3.02
36 37 5.415077 ACAGAGAATTGCTCCAAATCTTCAG 59.585 40.000 0.00 0.00 45.10 3.02
37 38 4.948621 AGAGAATTGCTCCAAATCTTCAGG 59.051 41.667 0.00 0.00 45.10 3.86
38 39 4.670765 AGAATTGCTCCAAATCTTCAGGT 58.329 39.130 0.00 0.00 30.48 4.00
39 40 5.082425 AGAATTGCTCCAAATCTTCAGGTT 58.918 37.500 0.00 0.00 30.48 3.50
40 41 6.248433 AGAATTGCTCCAAATCTTCAGGTTA 58.752 36.000 0.00 0.00 30.48 2.85
41 42 6.376581 AGAATTGCTCCAAATCTTCAGGTTAG 59.623 38.462 0.00 0.00 30.48 2.34
42 43 3.347216 TGCTCCAAATCTTCAGGTTAGC 58.653 45.455 0.00 0.00 0.00 3.09
43 44 2.685388 GCTCCAAATCTTCAGGTTAGCC 59.315 50.000 0.00 0.00 0.00 3.93
44 45 3.873801 GCTCCAAATCTTCAGGTTAGCCA 60.874 47.826 0.00 0.00 37.19 4.75
45 46 3.686016 TCCAAATCTTCAGGTTAGCCAC 58.314 45.455 0.00 0.00 37.19 5.01
54 55 3.317449 GGTTAGCCACCACTCGTTT 57.683 52.632 0.00 0.00 46.42 3.60
55 56 1.601166 GGTTAGCCACCACTCGTTTT 58.399 50.000 0.00 0.00 46.42 2.43
56 57 1.534163 GGTTAGCCACCACTCGTTTTC 59.466 52.381 0.00 0.00 46.42 2.29
57 58 2.215196 GTTAGCCACCACTCGTTTTCA 58.785 47.619 0.00 0.00 0.00 2.69
58 59 2.812011 GTTAGCCACCACTCGTTTTCAT 59.188 45.455 0.00 0.00 0.00 2.57
59 60 1.981256 AGCCACCACTCGTTTTCATT 58.019 45.000 0.00 0.00 0.00 2.57
60 61 2.306847 AGCCACCACTCGTTTTCATTT 58.693 42.857 0.00 0.00 0.00 2.32
61 62 2.693074 AGCCACCACTCGTTTTCATTTT 59.307 40.909 0.00 0.00 0.00 1.82
62 63 2.794350 GCCACCACTCGTTTTCATTTTG 59.206 45.455 0.00 0.00 0.00 2.44
63 64 3.490078 GCCACCACTCGTTTTCATTTTGA 60.490 43.478 0.00 0.00 0.00 2.69
64 65 4.795962 GCCACCACTCGTTTTCATTTTGAT 60.796 41.667 0.00 0.00 0.00 2.57
65 66 5.288804 CCACCACTCGTTTTCATTTTGATT 58.711 37.500 0.00 0.00 0.00 2.57
66 67 5.752955 CCACCACTCGTTTTCATTTTGATTT 59.247 36.000 0.00 0.00 0.00 2.17
67 68 6.257630 CCACCACTCGTTTTCATTTTGATTTT 59.742 34.615 0.00 0.00 0.00 1.82
68 69 7.118724 CACCACTCGTTTTCATTTTGATTTTG 58.881 34.615 0.00 0.00 0.00 2.44
69 70 7.009999 CACCACTCGTTTTCATTTTGATTTTGA 59.990 33.333 0.00 0.00 0.00 2.69
70 71 7.710475 ACCACTCGTTTTCATTTTGATTTTGAT 59.290 29.630 0.00 0.00 0.00 2.57
71 72 8.216453 CCACTCGTTTTCATTTTGATTTTGATC 58.784 33.333 0.00 0.00 0.00 2.92
72 73 8.971321 CACTCGTTTTCATTTTGATTTTGATCT 58.029 29.630 0.00 0.00 0.00 2.75
73 74 9.185192 ACTCGTTTTCATTTTGATTTTGATCTC 57.815 29.630 0.00 0.00 0.00 2.75
74 75 8.214722 TCGTTTTCATTTTGATTTTGATCTCG 57.785 30.769 0.00 0.00 0.00 4.04
75 76 7.325821 TCGTTTTCATTTTGATTTTGATCTCGG 59.674 33.333 0.00 0.00 0.00 4.63
76 77 7.114811 CGTTTTCATTTTGATTTTGATCTCGGT 59.885 33.333 0.00 0.00 0.00 4.69
77 78 7.872163 TTTCATTTTGATTTTGATCTCGGTG 57.128 32.000 0.00 0.00 0.00 4.94
78 79 6.816134 TCATTTTGATTTTGATCTCGGTGA 57.184 33.333 0.00 0.00 0.00 4.02
79 80 7.213216 TCATTTTGATTTTGATCTCGGTGAA 57.787 32.000 0.00 0.00 0.00 3.18
80 81 7.083858 TCATTTTGATTTTGATCTCGGTGAAC 58.916 34.615 0.00 0.00 0.00 3.18
81 82 6.384258 TTTTGATTTTGATCTCGGTGAACA 57.616 33.333 0.00 0.00 0.00 3.18
82 83 6.573664 TTTGATTTTGATCTCGGTGAACAT 57.426 33.333 0.00 0.00 0.00 2.71
83 84 7.680442 TTTGATTTTGATCTCGGTGAACATA 57.320 32.000 0.00 0.00 0.00 2.29
84 85 6.662414 TGATTTTGATCTCGGTGAACATAC 57.338 37.500 0.00 0.00 0.00 2.39
85 86 6.169800 TGATTTTGATCTCGGTGAACATACA 58.830 36.000 0.00 0.00 0.00 2.29
86 87 6.313658 TGATTTTGATCTCGGTGAACATACAG 59.686 38.462 0.00 0.00 0.00 2.74
87 88 3.801114 TGATCTCGGTGAACATACAGG 57.199 47.619 0.00 0.00 0.00 4.00
88 89 3.361786 TGATCTCGGTGAACATACAGGA 58.638 45.455 0.00 0.00 0.00 3.86
89 90 3.767131 TGATCTCGGTGAACATACAGGAA 59.233 43.478 0.00 0.00 0.00 3.36
90 91 4.405680 TGATCTCGGTGAACATACAGGAAT 59.594 41.667 0.00 0.00 0.00 3.01
91 92 4.123497 TCTCGGTGAACATACAGGAATG 57.877 45.455 0.00 0.00 0.00 2.67
92 93 3.767131 TCTCGGTGAACATACAGGAATGA 59.233 43.478 0.00 0.00 0.00 2.57
93 94 4.221924 TCTCGGTGAACATACAGGAATGAA 59.778 41.667 0.00 0.00 0.00 2.57
94 95 4.250464 TCGGTGAACATACAGGAATGAAC 58.750 43.478 0.00 0.00 0.00 3.18
95 96 3.062099 CGGTGAACATACAGGAATGAACG 59.938 47.826 0.00 0.00 0.00 3.95
96 97 4.250464 GGTGAACATACAGGAATGAACGA 58.750 43.478 0.00 0.00 0.00 3.85
97 98 4.092968 GGTGAACATACAGGAATGAACGAC 59.907 45.833 0.00 0.00 0.00 4.34
98 99 4.092968 GTGAACATACAGGAATGAACGACC 59.907 45.833 0.00 0.00 0.00 4.79
99 100 2.888594 ACATACAGGAATGAACGACCG 58.111 47.619 0.00 0.00 0.00 4.79
100 101 2.201732 CATACAGGAATGAACGACCGG 58.798 52.381 0.00 0.00 0.00 5.28
101 102 0.533491 TACAGGAATGAACGACCGGG 59.467 55.000 6.32 0.00 0.00 5.73
102 103 1.189524 ACAGGAATGAACGACCGGGA 61.190 55.000 6.32 0.00 0.00 5.14
103 104 0.460284 CAGGAATGAACGACCGGGAG 60.460 60.000 6.32 0.61 0.00 4.30
104 105 0.903454 AGGAATGAACGACCGGGAGT 60.903 55.000 6.32 1.41 0.00 3.85
105 106 0.036671 GGAATGAACGACCGGGAGTT 60.037 55.000 15.25 15.25 0.00 3.01
106 107 1.356938 GAATGAACGACCGGGAGTTC 58.643 55.000 27.09 27.09 44.93 3.01
107 108 0.036671 AATGAACGACCGGGAGTTCC 60.037 55.000 29.14 17.77 44.30 3.62
118 119 3.894257 GGAGTTCCCAAGCTTTTGC 57.106 52.632 0.00 0.00 39.47 3.68
119 120 0.318441 GGAGTTCCCAAGCTTTTGCC 59.682 55.000 0.00 0.00 39.82 4.52
120 121 2.370040 GGAGTTCCCAAGCTTTTGCCA 61.370 52.381 0.00 0.00 39.82 4.92
121 122 4.487318 GGAGTTCCCAAGCTTTTGCCAC 62.487 54.545 0.00 0.00 39.82 5.01
130 131 2.342910 GCTTTTGCCACAGTCTCATG 57.657 50.000 0.00 0.00 40.15 3.07
131 132 1.068055 GCTTTTGCCACAGTCTCATGG 60.068 52.381 0.00 0.00 40.15 3.66
132 133 2.507484 CTTTTGCCACAGTCTCATGGA 58.493 47.619 4.11 0.00 38.34 3.41
133 134 2.655090 TTTGCCACAGTCTCATGGAA 57.345 45.000 4.11 0.00 38.34 3.53
134 135 2.189594 TTGCCACAGTCTCATGGAAG 57.810 50.000 4.11 0.00 38.34 3.46
135 136 1.059098 TGCCACAGTCTCATGGAAGT 58.941 50.000 4.11 0.00 38.34 3.01
136 137 1.271001 TGCCACAGTCTCATGGAAGTG 60.271 52.381 4.11 2.61 38.34 3.16
137 138 1.002430 GCCACAGTCTCATGGAAGTGA 59.998 52.381 14.23 0.00 38.34 3.41
138 139 2.934364 GCCACAGTCTCATGGAAGTGAG 60.934 54.545 14.23 0.00 45.51 3.51
139 140 2.354503 CCACAGTCTCATGGAAGTGAGG 60.355 54.545 14.23 10.30 44.51 3.86
140 141 2.564504 CACAGTCTCATGGAAGTGAGGA 59.435 50.000 9.27 0.00 44.51 3.71
141 142 3.007290 CACAGTCTCATGGAAGTGAGGAA 59.993 47.826 9.27 0.00 44.51 3.36
142 143 3.648067 ACAGTCTCATGGAAGTGAGGAAA 59.352 43.478 9.27 0.00 44.51 3.13
143 144 4.103153 ACAGTCTCATGGAAGTGAGGAAAA 59.897 41.667 9.27 0.00 44.51 2.29
144 145 4.453819 CAGTCTCATGGAAGTGAGGAAAAC 59.546 45.833 4.28 0.00 44.51 2.43
145 146 4.349342 AGTCTCATGGAAGTGAGGAAAACT 59.651 41.667 4.28 0.00 44.51 2.66
146 147 5.066593 GTCTCATGGAAGTGAGGAAAACTT 58.933 41.667 4.28 0.00 44.51 2.66
147 148 5.049129 GTCTCATGGAAGTGAGGAAAACTTG 60.049 44.000 4.28 0.00 44.51 3.16
148 149 4.144297 TCATGGAAGTGAGGAAAACTTGG 58.856 43.478 0.00 0.00 37.98 3.61
149 150 2.306847 TGGAAGTGAGGAAAACTTGGC 58.693 47.619 0.00 0.00 37.98 4.52
150 151 1.613925 GGAAGTGAGGAAAACTTGGCC 59.386 52.381 0.00 0.00 37.98 5.36
151 152 2.306847 GAAGTGAGGAAAACTTGGCCA 58.693 47.619 0.00 0.00 37.98 5.36
152 153 2.452600 AGTGAGGAAAACTTGGCCAA 57.547 45.000 19.25 19.25 0.00 4.52
153 154 2.745968 AGTGAGGAAAACTTGGCCAAA 58.254 42.857 20.91 3.41 0.00 3.28
154 155 3.103742 AGTGAGGAAAACTTGGCCAAAA 58.896 40.909 20.91 0.00 0.00 2.44
155 156 3.132824 AGTGAGGAAAACTTGGCCAAAAG 59.867 43.478 20.91 11.61 0.00 2.27
156 157 2.158971 TGAGGAAAACTTGGCCAAAAGC 60.159 45.455 20.91 7.24 42.60 3.51
157 158 2.103094 GAGGAAAACTTGGCCAAAAGCT 59.897 45.455 20.91 4.48 43.05 3.74
158 159 2.103094 AGGAAAACTTGGCCAAAAGCTC 59.897 45.455 20.91 13.35 43.05 4.09
159 160 2.103094 GGAAAACTTGGCCAAAAGCTCT 59.897 45.455 20.91 1.75 43.05 4.09
160 161 3.384668 GAAAACTTGGCCAAAAGCTCTC 58.615 45.455 20.91 7.81 43.05 3.20
161 162 2.071778 AACTTGGCCAAAAGCTCTCA 57.928 45.000 20.91 0.00 43.05 3.27
162 163 2.299326 ACTTGGCCAAAAGCTCTCAT 57.701 45.000 20.91 0.00 43.05 2.90
163 164 3.439857 ACTTGGCCAAAAGCTCTCATA 57.560 42.857 20.91 0.00 43.05 2.15
164 165 3.973425 ACTTGGCCAAAAGCTCTCATAT 58.027 40.909 20.91 0.00 43.05 1.78
165 166 4.347607 ACTTGGCCAAAAGCTCTCATATT 58.652 39.130 20.91 0.00 43.05 1.28
166 167 4.774200 ACTTGGCCAAAAGCTCTCATATTT 59.226 37.500 20.91 0.00 43.05 1.40
167 168 4.724074 TGGCCAAAAGCTCTCATATTTG 57.276 40.909 0.61 0.00 43.05 2.32
168 169 4.343231 TGGCCAAAAGCTCTCATATTTGA 58.657 39.130 0.61 0.00 43.05 2.69
169 170 4.771577 TGGCCAAAAGCTCTCATATTTGAA 59.228 37.500 0.61 0.00 43.05 2.69
170 171 5.422970 TGGCCAAAAGCTCTCATATTTGAAT 59.577 36.000 0.61 0.00 43.05 2.57
171 172 5.981915 GGCCAAAAGCTCTCATATTTGAATC 59.018 40.000 0.00 0.00 43.05 2.52
172 173 6.183360 GGCCAAAAGCTCTCATATTTGAATCT 60.183 38.462 0.00 0.00 43.05 2.40
173 174 7.263496 GCCAAAAGCTCTCATATTTGAATCTT 58.737 34.615 7.68 0.00 38.99 2.40
174 175 7.222224 GCCAAAAGCTCTCATATTTGAATCTTG 59.778 37.037 7.68 0.00 38.99 3.02
175 176 7.222224 CCAAAAGCTCTCATATTTGAATCTTGC 59.778 37.037 7.68 0.00 35.34 4.01
176 177 6.388435 AAGCTCTCATATTTGAATCTTGCC 57.612 37.500 0.00 0.00 0.00 4.52
177 178 5.692928 AGCTCTCATATTTGAATCTTGCCT 58.307 37.500 0.00 0.00 0.00 4.75
178 179 6.127793 AGCTCTCATATTTGAATCTTGCCTT 58.872 36.000 0.00 0.00 0.00 4.35
179 180 6.606395 AGCTCTCATATTTGAATCTTGCCTTT 59.394 34.615 0.00 0.00 0.00 3.11
180 181 7.776969 AGCTCTCATATTTGAATCTTGCCTTTA 59.223 33.333 0.00 0.00 0.00 1.85
181 182 8.574737 GCTCTCATATTTGAATCTTGCCTTTAT 58.425 33.333 0.00 0.00 0.00 1.40
182 183 9.894783 CTCTCATATTTGAATCTTGCCTTTATG 57.105 33.333 0.00 0.00 0.00 1.90
183 184 9.412460 TCTCATATTTGAATCTTGCCTTTATGT 57.588 29.630 0.00 0.00 0.00 2.29
184 185 9.459640 CTCATATTTGAATCTTGCCTTTATGTG 57.540 33.333 0.00 0.00 0.00 3.21
185 186 7.922278 TCATATTTGAATCTTGCCTTTATGTGC 59.078 33.333 0.00 0.00 0.00 4.57
186 187 3.763097 TGAATCTTGCCTTTATGTGCG 57.237 42.857 0.00 0.00 0.00 5.34
187 188 2.423185 TGAATCTTGCCTTTATGTGCGG 59.577 45.455 0.00 0.00 0.00 5.69
188 189 1.392589 ATCTTGCCTTTATGTGCGGG 58.607 50.000 0.00 0.00 0.00 6.13
189 190 0.679640 TCTTGCCTTTATGTGCGGGG 60.680 55.000 0.00 0.00 0.00 5.73
190 191 2.283472 CTTGCCTTTATGTGCGGGGC 62.283 60.000 0.00 0.00 42.73 5.80
191 192 3.527427 GCCTTTATGTGCGGGGCC 61.527 66.667 0.00 0.00 37.12 5.80
192 193 2.044451 CCTTTATGTGCGGGGCCA 60.044 61.111 4.39 0.00 0.00 5.36
193 194 2.414785 CCTTTATGTGCGGGGCCAC 61.415 63.158 4.39 0.00 36.28 5.01
209 210 2.503895 CCACAGAGGAGGCAAGAAAT 57.496 50.000 0.00 0.00 41.22 2.17
210 211 2.363683 CCACAGAGGAGGCAAGAAATC 58.636 52.381 0.00 0.00 41.22 2.17
211 212 2.290514 CCACAGAGGAGGCAAGAAATCA 60.291 50.000 0.00 0.00 41.22 2.57
212 213 3.008330 CACAGAGGAGGCAAGAAATCAG 58.992 50.000 0.00 0.00 0.00 2.90
213 214 2.641815 ACAGAGGAGGCAAGAAATCAGT 59.358 45.455 0.00 0.00 0.00 3.41
214 215 3.008330 CAGAGGAGGCAAGAAATCAGTG 58.992 50.000 0.00 0.00 0.00 3.66
215 216 2.026449 AGAGGAGGCAAGAAATCAGTGG 60.026 50.000 0.00 0.00 0.00 4.00
216 217 1.005215 AGGAGGCAAGAAATCAGTGGG 59.995 52.381 0.00 0.00 0.00 4.61
217 218 0.813821 GAGGCAAGAAATCAGTGGGC 59.186 55.000 0.00 0.00 0.00 5.36
218 219 0.112995 AGGCAAGAAATCAGTGGGCA 59.887 50.000 0.00 0.00 0.00 5.36
219 220 0.968405 GGCAAGAAATCAGTGGGCAA 59.032 50.000 0.00 0.00 0.00 4.52
220 221 1.551883 GGCAAGAAATCAGTGGGCAAT 59.448 47.619 0.00 0.00 0.00 3.56
221 222 2.613691 GCAAGAAATCAGTGGGCAATG 58.386 47.619 0.00 0.00 0.00 2.82
222 223 2.675889 GCAAGAAATCAGTGGGCAATGG 60.676 50.000 0.00 0.00 0.00 3.16
223 224 2.564062 CAAGAAATCAGTGGGCAATGGT 59.436 45.455 0.00 0.00 0.00 3.55
224 225 2.450476 AGAAATCAGTGGGCAATGGTC 58.550 47.619 0.00 0.00 0.00 4.02
225 226 2.042162 AGAAATCAGTGGGCAATGGTCT 59.958 45.455 0.00 0.00 0.00 3.85
226 227 1.843368 AATCAGTGGGCAATGGTCTG 58.157 50.000 0.00 0.00 0.00 3.51
227 228 0.994247 ATCAGTGGGCAATGGTCTGA 59.006 50.000 0.00 0.00 39.05 3.27
228 229 0.770499 TCAGTGGGCAATGGTCTGAA 59.230 50.000 0.00 0.00 33.18 3.02
229 230 1.144708 TCAGTGGGCAATGGTCTGAAA 59.855 47.619 0.00 0.00 33.18 2.69
230 231 1.270550 CAGTGGGCAATGGTCTGAAAC 59.729 52.381 0.00 0.00 0.00 2.78
231 232 1.145738 AGTGGGCAATGGTCTGAAACT 59.854 47.619 0.00 0.00 0.00 2.66
232 233 1.270550 GTGGGCAATGGTCTGAAACTG 59.729 52.381 0.00 0.00 0.00 3.16
233 234 1.144708 TGGGCAATGGTCTGAAACTGA 59.855 47.619 0.00 0.00 0.00 3.41
234 235 2.225091 TGGGCAATGGTCTGAAACTGAT 60.225 45.455 0.00 0.00 0.00 2.90
235 236 2.165030 GGGCAATGGTCTGAAACTGATG 59.835 50.000 0.00 0.00 0.00 3.07
236 237 2.821969 GGCAATGGTCTGAAACTGATGT 59.178 45.455 0.00 0.00 0.00 3.06
237 238 4.009675 GGCAATGGTCTGAAACTGATGTA 58.990 43.478 0.00 0.00 0.00 2.29
238 239 4.095483 GGCAATGGTCTGAAACTGATGTAG 59.905 45.833 0.00 0.00 0.00 2.74
239 240 4.937620 GCAATGGTCTGAAACTGATGTAGA 59.062 41.667 0.00 0.00 0.00 2.59
240 241 5.587844 GCAATGGTCTGAAACTGATGTAGAT 59.412 40.000 0.00 0.00 0.00 1.98
241 242 6.457934 GCAATGGTCTGAAACTGATGTAGATG 60.458 42.308 0.00 0.00 0.00 2.90
242 243 4.507710 TGGTCTGAAACTGATGTAGATGC 58.492 43.478 0.00 0.00 0.00 3.91
243 244 4.020307 TGGTCTGAAACTGATGTAGATGCA 60.020 41.667 0.00 0.00 0.00 3.96
244 245 4.569966 GGTCTGAAACTGATGTAGATGCAG 59.430 45.833 0.00 0.00 35.81 4.41
245 246 4.033817 GTCTGAAACTGATGTAGATGCAGC 59.966 45.833 0.00 0.00 33.03 5.25
246 247 3.273434 TGAAACTGATGTAGATGCAGCC 58.727 45.455 0.00 0.00 33.03 4.85
247 248 3.273434 GAAACTGATGTAGATGCAGCCA 58.727 45.455 0.00 0.00 33.03 4.75
248 249 3.572632 AACTGATGTAGATGCAGCCAT 57.427 42.857 0.00 0.00 33.03 4.40
249 250 2.847441 ACTGATGTAGATGCAGCCATG 58.153 47.619 0.00 0.00 33.03 3.66
250 251 2.436911 ACTGATGTAGATGCAGCCATGA 59.563 45.455 0.00 0.00 33.03 3.07
251 252 3.067833 CTGATGTAGATGCAGCCATGAG 58.932 50.000 0.00 0.00 0.00 2.90
252 253 1.805345 GATGTAGATGCAGCCATGAGC 59.195 52.381 0.00 0.00 44.25 4.26
262 263 2.192443 CCATGAGCAGGCAGGAGG 59.808 66.667 0.00 0.00 0.00 4.30
263 264 2.192443 CATGAGCAGGCAGGAGGG 59.808 66.667 0.00 0.00 0.00 4.30
264 265 3.095163 ATGAGCAGGCAGGAGGGG 61.095 66.667 0.00 0.00 0.00 4.79
265 266 3.647921 ATGAGCAGGCAGGAGGGGA 62.648 63.158 0.00 0.00 0.00 4.81
266 267 3.011517 GAGCAGGCAGGAGGGGAA 61.012 66.667 0.00 0.00 0.00 3.97
267 268 3.013932 AGCAGGCAGGAGGGGAAG 61.014 66.667 0.00 0.00 0.00 3.46
268 269 4.120755 GCAGGCAGGAGGGGAAGG 62.121 72.222 0.00 0.00 0.00 3.46
269 270 2.285668 CAGGCAGGAGGGGAAGGA 60.286 66.667 0.00 0.00 0.00 3.36
270 271 2.285743 AGGCAGGAGGGGAAGGAC 60.286 66.667 0.00 0.00 0.00 3.85
271 272 2.610859 GGCAGGAGGGGAAGGACA 60.611 66.667 0.00 0.00 0.00 4.02
272 273 2.671682 GCAGGAGGGGAAGGACAC 59.328 66.667 0.00 0.00 0.00 3.67
273 274 2.972819 GCAGGAGGGGAAGGACACC 61.973 68.421 0.00 0.00 43.70 4.16
283 284 3.201595 AGGACACCTCCTAGGGCA 58.798 61.111 9.46 0.00 46.16 5.36
284 285 1.474307 AGGACACCTCCTAGGGCAA 59.526 57.895 9.46 0.00 46.16 4.52
285 286 0.044855 AGGACACCTCCTAGGGCAAT 59.955 55.000 9.46 0.00 46.16 3.56
286 287 0.181350 GGACACCTCCTAGGGCAATG 59.819 60.000 9.46 5.37 40.58 2.82
287 288 0.912486 GACACCTCCTAGGGCAATGT 59.088 55.000 9.46 8.66 40.58 2.71
288 289 1.282157 GACACCTCCTAGGGCAATGTT 59.718 52.381 9.46 0.00 40.58 2.71
289 290 1.004745 ACACCTCCTAGGGCAATGTTG 59.995 52.381 9.46 0.00 40.58 3.33
308 309 8.965172 CAATGTTGCAGAAGAATTTATCTATGC 58.035 33.333 8.03 8.03 44.98 3.14
312 313 6.309712 GCAGAAGAATTTATCTATGCAGCA 57.690 37.500 0.00 0.00 44.52 4.41
313 314 6.372185 GCAGAAGAATTTATCTATGCAGCAG 58.628 40.000 0.00 0.00 44.52 4.24
314 315 6.568081 GCAGAAGAATTTATCTATGCAGCAGG 60.568 42.308 0.00 0.00 44.52 4.85
315 316 6.002704 AGAAGAATTTATCTATGCAGCAGGG 58.997 40.000 0.00 0.00 37.42 4.45
316 317 4.077822 AGAATTTATCTATGCAGCAGGGC 58.922 43.478 0.00 0.00 36.32 5.19
317 318 1.882912 TTTATCTATGCAGCAGGGCG 58.117 50.000 0.00 0.00 36.28 6.13
318 319 0.758734 TTATCTATGCAGCAGGGCGT 59.241 50.000 0.00 0.00 36.28 5.68
319 320 0.758734 TATCTATGCAGCAGGGCGTT 59.241 50.000 0.00 0.00 36.28 4.84
320 321 0.816825 ATCTATGCAGCAGGGCGTTG 60.817 55.000 0.00 0.00 36.28 4.10
321 322 2.438254 TATGCAGCAGGGCGTTGG 60.438 61.111 0.00 0.00 36.28 3.77
322 323 2.874648 CTATGCAGCAGGGCGTTGGA 62.875 60.000 0.00 0.00 36.28 3.53
323 324 2.269520 TATGCAGCAGGGCGTTGGAT 62.270 55.000 0.00 0.00 40.06 3.41
324 325 3.064324 GCAGCAGGGCGTTGGATT 61.064 61.111 0.00 0.00 0.00 3.01
325 326 2.639327 GCAGCAGGGCGTTGGATTT 61.639 57.895 0.00 0.00 0.00 2.17
326 327 1.966762 CAGCAGGGCGTTGGATTTT 59.033 52.632 0.00 0.00 0.00 1.82
327 328 0.109132 CAGCAGGGCGTTGGATTTTC 60.109 55.000 0.00 0.00 0.00 2.29
328 329 1.215382 GCAGGGCGTTGGATTTTCC 59.785 57.895 0.00 0.00 36.96 3.13
329 330 1.890174 CAGGGCGTTGGATTTTCCC 59.110 57.895 0.00 0.00 35.03 3.97
330 331 1.774300 AGGGCGTTGGATTTTCCCT 59.226 52.632 0.00 0.00 42.25 4.20
331 332 0.323451 AGGGCGTTGGATTTTCCCTC 60.323 55.000 0.00 0.00 43.53 4.30
332 333 0.323451 GGGCGTTGGATTTTCCCTCT 60.323 55.000 0.00 0.00 35.03 3.69
333 334 1.095600 GGCGTTGGATTTTCCCTCTC 58.904 55.000 0.00 0.00 35.03 3.20
334 335 0.727398 GCGTTGGATTTTCCCTCTCG 59.273 55.000 0.00 0.00 35.03 4.04
335 336 0.727398 CGTTGGATTTTCCCTCTCGC 59.273 55.000 0.00 0.00 35.03 5.03
336 337 1.676014 CGTTGGATTTTCCCTCTCGCT 60.676 52.381 0.00 0.00 35.03 4.93
337 338 2.437413 GTTGGATTTTCCCTCTCGCTT 58.563 47.619 0.00 0.00 35.03 4.68
338 339 2.113860 TGGATTTTCCCTCTCGCTTG 57.886 50.000 0.00 0.00 35.03 4.01
339 340 1.628340 TGGATTTTCCCTCTCGCTTGA 59.372 47.619 0.00 0.00 35.03 3.02
340 341 2.010497 GGATTTTCCCTCTCGCTTGAC 58.990 52.381 0.00 0.00 0.00 3.18
341 342 2.010497 GATTTTCCCTCTCGCTTGACC 58.990 52.381 0.00 0.00 0.00 4.02
342 343 0.762418 TTTTCCCTCTCGCTTGACCA 59.238 50.000 0.00 0.00 0.00 4.02
343 344 0.984230 TTTCCCTCTCGCTTGACCAT 59.016 50.000 0.00 0.00 0.00 3.55
344 345 0.250234 TTCCCTCTCGCTTGACCATG 59.750 55.000 0.00 0.00 0.00 3.66
345 346 0.904865 TCCCTCTCGCTTGACCATGT 60.905 55.000 0.00 0.00 0.00 3.21
346 347 0.036010 CCCTCTCGCTTGACCATGTT 60.036 55.000 0.00 0.00 0.00 2.71
347 348 1.207089 CCCTCTCGCTTGACCATGTTA 59.793 52.381 0.00 0.00 0.00 2.41
394 396 0.394565 GTCAAGCTCTCACACCACCT 59.605 55.000 0.00 0.00 0.00 4.00
420 422 1.527380 GACACCGTCAAAGGGGCAA 60.527 57.895 0.00 0.00 38.56 4.52
469 471 1.909302 AGAACAAGTCCACATCCCGAT 59.091 47.619 0.00 0.00 0.00 4.18
471 473 2.879103 ACAAGTCCACATCCCGATTT 57.121 45.000 0.00 0.00 0.00 2.17
476 478 5.126067 CAAGTCCACATCCCGATTTAAGAT 58.874 41.667 0.00 0.00 0.00 2.40
480 482 3.251729 CCACATCCCGATTTAAGATGCAG 59.748 47.826 0.00 0.00 40.87 4.41
534 576 5.168679 AGAATCCCTGAGACCCATAATGAT 58.831 41.667 0.00 0.00 0.00 2.45
539 581 5.187772 TCCCTGAGACCCATAATGATAATCG 59.812 44.000 0.00 0.00 0.00 3.34
581 623 1.755959 TGCACTTCAAATGTTGCCTGT 59.244 42.857 0.00 0.00 0.00 4.00
582 624 2.954989 TGCACTTCAAATGTTGCCTGTA 59.045 40.909 0.00 0.00 0.00 2.74
586 628 5.531634 CACTTCAAATGTTGCCTGTACATT 58.468 37.500 0.00 0.00 45.49 2.71
614 656 1.081094 CGTTTAGGGCGACGGATTTT 58.919 50.000 0.00 0.00 35.74 1.82
620 662 1.419107 GGGCGACGGATTTTCGAGTC 61.419 60.000 0.00 0.00 38.85 3.36
621 663 1.419107 GGCGACGGATTTTCGAGTCC 61.419 60.000 0.00 4.09 38.85 3.85
637 687 1.478510 AGTCCGGTTGTAGATGCTCTG 59.521 52.381 0.00 0.00 0.00 3.35
638 688 0.824109 TCCGGTTGTAGATGCTCTGG 59.176 55.000 0.00 0.00 0.00 3.86
639 689 0.811616 CCGGTTGTAGATGCTCTGGC 60.812 60.000 0.00 0.00 39.26 4.85
670 720 5.808042 TGCTACACCTAAGTAGACTTACG 57.192 43.478 5.38 0.00 43.24 3.18
671 721 5.248640 TGCTACACCTAAGTAGACTTACGT 58.751 41.667 5.38 0.00 43.24 3.57
672 722 5.707298 TGCTACACCTAAGTAGACTTACGTT 59.293 40.000 0.00 0.00 43.24 3.99
673 723 6.128172 TGCTACACCTAAGTAGACTTACGTTC 60.128 42.308 0.00 0.00 43.24 3.95
674 724 6.093357 GCTACACCTAAGTAGACTTACGTTCT 59.907 42.308 0.00 0.00 43.24 3.01
675 725 6.493449 ACACCTAAGTAGACTTACGTTCTC 57.507 41.667 0.00 0.00 37.40 2.87
676 726 5.414144 ACACCTAAGTAGACTTACGTTCTCC 59.586 44.000 0.00 0.00 37.40 3.71
677 727 5.647225 CACCTAAGTAGACTTACGTTCTCCT 59.353 44.000 0.00 0.00 37.40 3.69
678 728 5.879777 ACCTAAGTAGACTTACGTTCTCCTC 59.120 44.000 0.00 0.00 37.40 3.71
679 729 5.296531 CCTAAGTAGACTTACGTTCTCCTCC 59.703 48.000 0.00 0.00 37.40 4.30
680 730 4.573021 AGTAGACTTACGTTCTCCTCCT 57.427 45.455 0.00 0.00 34.88 3.69
681 731 5.690464 AGTAGACTTACGTTCTCCTCCTA 57.310 43.478 0.00 0.00 34.88 2.94
682 732 5.427378 AGTAGACTTACGTTCTCCTCCTAC 58.573 45.833 0.00 0.00 34.88 3.18
683 733 3.269178 AGACTTACGTTCTCCTCCTACG 58.731 50.000 0.00 0.00 40.85 3.51
685 735 4.081420 AGACTTACGTTCTCCTCCTACGTA 60.081 45.833 0.00 0.00 45.59 3.57
689 739 3.883669 ACGTTCTCCTCCTACGTAATCT 58.116 45.455 0.00 0.00 45.59 2.40
690 740 4.268359 ACGTTCTCCTCCTACGTAATCTT 58.732 43.478 0.00 0.00 45.59 2.40
691 741 4.335037 ACGTTCTCCTCCTACGTAATCTTC 59.665 45.833 0.00 0.00 45.59 2.87
692 742 4.261114 CGTTCTCCTCCTACGTAATCTTCC 60.261 50.000 0.00 0.00 0.00 3.46
693 743 4.792513 TCTCCTCCTACGTAATCTTCCT 57.207 45.455 0.00 0.00 0.00 3.36
694 744 5.901413 TCTCCTCCTACGTAATCTTCCTA 57.099 43.478 0.00 0.00 0.00 2.94
695 745 6.257994 TCTCCTCCTACGTAATCTTCCTAA 57.742 41.667 0.00 0.00 0.00 2.69
696 746 6.060788 TCTCCTCCTACGTAATCTTCCTAAC 58.939 44.000 0.00 0.00 0.00 2.34
697 747 5.759059 TCCTCCTACGTAATCTTCCTAACA 58.241 41.667 0.00 0.00 0.00 2.41
698 748 6.189859 TCCTCCTACGTAATCTTCCTAACAA 58.810 40.000 0.00 0.00 0.00 2.83
699 749 6.664816 TCCTCCTACGTAATCTTCCTAACAAA 59.335 38.462 0.00 0.00 0.00 2.83
700 750 6.755607 CCTCCTACGTAATCTTCCTAACAAAC 59.244 42.308 0.00 0.00 0.00 2.93
701 751 6.633856 TCCTACGTAATCTTCCTAACAAACC 58.366 40.000 0.00 0.00 0.00 3.27
702 752 6.438425 TCCTACGTAATCTTCCTAACAAACCT 59.562 38.462 0.00 0.00 0.00 3.50
703 753 6.755607 CCTACGTAATCTTCCTAACAAACCTC 59.244 42.308 0.00 0.00 0.00 3.85
704 754 6.356186 ACGTAATCTTCCTAACAAACCTCT 57.644 37.500 0.00 0.00 0.00 3.69
705 755 6.396450 ACGTAATCTTCCTAACAAACCTCTC 58.604 40.000 0.00 0.00 0.00 3.20
706 756 5.811100 CGTAATCTTCCTAACAAACCTCTCC 59.189 44.000 0.00 0.00 0.00 3.71
707 757 5.843019 AATCTTCCTAACAAACCTCTCCA 57.157 39.130 0.00 0.00 0.00 3.86
708 758 4.618920 TCTTCCTAACAAACCTCTCCAC 57.381 45.455 0.00 0.00 0.00 4.02
709 759 3.326880 TCTTCCTAACAAACCTCTCCACC 59.673 47.826 0.00 0.00 0.00 4.61
710 760 1.982958 TCCTAACAAACCTCTCCACCC 59.017 52.381 0.00 0.00 0.00 4.61
711 761 1.004394 CCTAACAAACCTCTCCACCCC 59.996 57.143 0.00 0.00 0.00 4.95
712 762 1.985895 CTAACAAACCTCTCCACCCCT 59.014 52.381 0.00 0.00 0.00 4.79
713 763 0.478507 AACAAACCTCTCCACCCCTG 59.521 55.000 0.00 0.00 0.00 4.45
714 764 0.401395 ACAAACCTCTCCACCCCTGA 60.401 55.000 0.00 0.00 0.00 3.86
715 765 0.995024 CAAACCTCTCCACCCCTGAT 59.005 55.000 0.00 0.00 0.00 2.90
716 766 1.355720 CAAACCTCTCCACCCCTGATT 59.644 52.381 0.00 0.00 0.00 2.57
717 767 1.760405 AACCTCTCCACCCCTGATTT 58.240 50.000 0.00 0.00 0.00 2.17
718 768 1.290134 ACCTCTCCACCCCTGATTTC 58.710 55.000 0.00 0.00 0.00 2.17
719 769 1.289160 CCTCTCCACCCCTGATTTCA 58.711 55.000 0.00 0.00 0.00 2.69
720 770 1.635487 CCTCTCCACCCCTGATTTCAA 59.365 52.381 0.00 0.00 0.00 2.69
721 771 2.356535 CCTCTCCACCCCTGATTTCAAG 60.357 54.545 0.00 0.00 0.00 3.02
722 772 2.307098 CTCTCCACCCCTGATTTCAAGT 59.693 50.000 0.00 0.00 0.00 3.16
723 773 2.040278 TCTCCACCCCTGATTTCAAGTG 59.960 50.000 0.00 0.00 0.00 3.16
724 774 1.075374 TCCACCCCTGATTTCAAGTGG 59.925 52.381 13.83 13.83 40.30 4.00
725 775 1.075374 CCACCCCTGATTTCAAGTGGA 59.925 52.381 14.46 0.00 40.89 4.02
726 776 2.291800 CCACCCCTGATTTCAAGTGGAT 60.292 50.000 14.46 0.00 40.89 3.41
727 777 2.756760 CACCCCTGATTTCAAGTGGATG 59.243 50.000 0.00 0.00 0.00 3.51
728 778 2.291800 ACCCCTGATTTCAAGTGGATGG 60.292 50.000 0.00 0.00 0.00 3.51
729 779 1.753073 CCCTGATTTCAAGTGGATGGC 59.247 52.381 0.00 0.00 0.00 4.40
730 780 1.753073 CCTGATTTCAAGTGGATGGCC 59.247 52.381 0.00 0.00 0.00 5.36
731 781 1.753073 CTGATTTCAAGTGGATGGCCC 59.247 52.381 0.00 0.00 0.00 5.80
732 782 1.114627 GATTTCAAGTGGATGGCCCC 58.885 55.000 0.00 0.00 0.00 5.80
733 783 0.325577 ATTTCAAGTGGATGGCCCCC 60.326 55.000 0.00 1.46 0.00 5.40
734 784 1.734420 TTTCAAGTGGATGGCCCCCA 61.734 55.000 9.69 9.69 38.19 4.96
739 789 3.346734 TGGATGGCCCCCACTTCC 61.347 66.667 9.69 2.97 35.80 3.46
740 790 4.143301 GGATGGCCCCCACTTCCC 62.143 72.222 0.00 0.00 35.80 3.97
741 791 3.023735 GATGGCCCCCACTTCCCT 61.024 66.667 0.00 0.00 35.80 4.20
742 792 1.696314 GATGGCCCCCACTTCCCTA 60.696 63.158 0.00 0.00 35.80 3.53
743 793 1.230482 ATGGCCCCCACTTCCCTAA 60.230 57.895 0.00 0.00 35.80 2.69
744 794 0.630478 ATGGCCCCCACTTCCCTAAT 60.630 55.000 0.00 0.00 35.80 1.73
745 795 0.853586 TGGCCCCCACTTCCCTAATT 60.854 55.000 0.00 0.00 0.00 1.40
746 796 0.106167 GGCCCCCACTTCCCTAATTC 60.106 60.000 0.00 0.00 0.00 2.17
747 797 0.465642 GCCCCCACTTCCCTAATTCG 60.466 60.000 0.00 0.00 0.00 3.34
748 798 0.916809 CCCCCACTTCCCTAATTCGT 59.083 55.000 0.00 0.00 0.00 3.85
749 799 1.134189 CCCCCACTTCCCTAATTCGTC 60.134 57.143 0.00 0.00 0.00 4.20
750 800 1.134189 CCCCACTTCCCTAATTCGTCC 60.134 57.143 0.00 0.00 0.00 4.79
751 801 1.557832 CCCACTTCCCTAATTCGTCCA 59.442 52.381 0.00 0.00 0.00 4.02
752 802 2.026636 CCCACTTCCCTAATTCGTCCAA 60.027 50.000 0.00 0.00 0.00 3.53
753 803 3.007635 CCACTTCCCTAATTCGTCCAAC 58.992 50.000 0.00 0.00 0.00 3.77
754 804 3.558321 CCACTTCCCTAATTCGTCCAACA 60.558 47.826 0.00 0.00 0.00 3.33
755 805 4.069304 CACTTCCCTAATTCGTCCAACAA 58.931 43.478 0.00 0.00 0.00 2.83
756 806 4.517453 CACTTCCCTAATTCGTCCAACAAA 59.483 41.667 0.00 0.00 0.00 2.83
757 807 5.009210 CACTTCCCTAATTCGTCCAACAAAA 59.991 40.000 0.00 0.00 0.00 2.44
758 808 5.595133 ACTTCCCTAATTCGTCCAACAAAAA 59.405 36.000 0.00 0.00 0.00 1.94
778 828 6.849588 AAAAACTGTTTACGTAGGTGTAGG 57.150 37.500 6.16 0.00 0.00 3.18
779 829 4.525912 AACTGTTTACGTAGGTGTAGGG 57.474 45.455 0.00 0.00 0.00 3.53
780 830 3.500343 ACTGTTTACGTAGGTGTAGGGT 58.500 45.455 0.00 0.00 0.00 4.34
781 831 3.897505 ACTGTTTACGTAGGTGTAGGGTT 59.102 43.478 0.00 0.00 0.00 4.11
782 832 5.076873 ACTGTTTACGTAGGTGTAGGGTTA 58.923 41.667 0.00 0.00 0.00 2.85
783 833 5.048013 ACTGTTTACGTAGGTGTAGGGTTAC 60.048 44.000 0.00 0.00 0.00 2.50
784 834 5.076873 TGTTTACGTAGGTGTAGGGTTACT 58.923 41.667 0.00 0.00 0.00 2.24
785 835 5.183140 TGTTTACGTAGGTGTAGGGTTACTC 59.817 44.000 0.00 0.00 0.00 2.59
786 836 2.728007 ACGTAGGTGTAGGGTTACTCC 58.272 52.381 0.00 0.00 41.60 3.85
790 840 2.537143 AGGTGTAGGGTTACTCCTGTG 58.463 52.381 7.34 0.00 46.71 3.66
918 968 9.690434 GAACAGTTCTCATTCGTCAAATATAAC 57.310 33.333 6.00 0.00 0.00 1.89
1013 1063 0.394352 AGAACAATGGCATCGGGGAC 60.394 55.000 0.00 0.00 0.00 4.46
1065 1115 0.871722 CGTCGTTTGCCATTTCCTCA 59.128 50.000 0.00 0.00 0.00 3.86
1443 1494 4.578898 AACGTGTCGTGCCGCTCA 62.579 61.111 0.00 0.00 39.99 4.26
1677 1728 2.537959 ATGGGAAGGGGGCCACTT 60.538 61.111 23.87 23.87 0.00 3.16
1683 1734 3.569200 AAGGGGGCCACTTTCGCTC 62.569 63.158 17.30 0.00 0.00 5.03
1685 1736 4.699522 GGGGCCACTTTCGCTCGT 62.700 66.667 4.39 0.00 0.00 4.18
1689 1740 2.668280 GCCACTTTCGCTCGTGTCC 61.668 63.158 0.00 0.00 0.00 4.02
1759 1810 3.144193 CGGCGAGCCCTCTCTTCT 61.144 66.667 0.00 0.00 37.19 2.85
1876 1927 3.000819 AAGGGATCACCGTCGGCA 61.001 61.111 12.28 0.00 46.96 5.69
2301 2352 2.259818 CTGTCGTTCGAGCCAGCT 59.740 61.111 0.00 0.00 0.00 4.24
2335 2386 5.006386 AGCTCTAGGATTGGTGAAAGTTTG 58.994 41.667 0.00 0.00 0.00 2.93
2336 2387 4.379918 GCTCTAGGATTGGTGAAAGTTTGC 60.380 45.833 0.00 0.00 0.00 3.68
2337 2388 4.079253 TCTAGGATTGGTGAAAGTTTGCC 58.921 43.478 0.00 0.00 0.00 4.52
2338 2389 1.613437 AGGATTGGTGAAAGTTTGCCG 59.387 47.619 0.00 0.00 0.00 5.69
2339 2390 1.611491 GGATTGGTGAAAGTTTGCCGA 59.389 47.619 0.00 0.00 0.00 5.54
2340 2391 2.035321 GGATTGGTGAAAGTTTGCCGAA 59.965 45.455 0.00 0.00 0.00 4.30
2341 2392 3.491792 GGATTGGTGAAAGTTTGCCGAAA 60.492 43.478 0.00 0.00 0.00 3.46
2342 2393 3.810310 TTGGTGAAAGTTTGCCGAAAT 57.190 38.095 0.00 0.00 0.00 2.17
2343 2394 3.363341 TGGTGAAAGTTTGCCGAAATC 57.637 42.857 0.00 0.00 0.00 2.17
2344 2395 2.035321 TGGTGAAAGTTTGCCGAAATCC 59.965 45.455 0.00 0.00 0.00 3.01
2345 2396 2.296190 GGTGAAAGTTTGCCGAAATCCT 59.704 45.455 0.00 0.00 0.00 3.24
2346 2397 3.243737 GGTGAAAGTTTGCCGAAATCCTT 60.244 43.478 0.00 0.00 0.00 3.36
2347 2398 4.368315 GTGAAAGTTTGCCGAAATCCTTT 58.632 39.130 0.00 0.00 0.00 3.11
2348 2399 4.808895 GTGAAAGTTTGCCGAAATCCTTTT 59.191 37.500 0.00 0.00 0.00 2.27
2349 2400 5.980715 GTGAAAGTTTGCCGAAATCCTTTTA 59.019 36.000 0.00 0.00 0.00 1.52
2350 2401 6.143919 GTGAAAGTTTGCCGAAATCCTTTTAG 59.856 38.462 0.00 0.00 0.00 1.85
2351 2402 4.174411 AGTTTGCCGAAATCCTTTTAGC 57.826 40.909 0.00 0.00 0.00 3.09
2352 2403 3.056821 AGTTTGCCGAAATCCTTTTAGCC 60.057 43.478 0.00 0.00 0.00 3.93
2353 2404 2.507407 TGCCGAAATCCTTTTAGCCT 57.493 45.000 0.00 0.00 0.00 4.58
2354 2405 2.091541 TGCCGAAATCCTTTTAGCCTG 58.908 47.619 0.00 0.00 0.00 4.85
2355 2406 1.405463 GCCGAAATCCTTTTAGCCTGG 59.595 52.381 0.00 0.00 0.00 4.45
2356 2407 2.024414 CCGAAATCCTTTTAGCCTGGG 58.976 52.381 0.00 0.00 0.00 4.45
2357 2408 1.405463 CGAAATCCTTTTAGCCTGGGC 59.595 52.381 3.00 3.00 42.33 5.36
2367 2418 3.755434 GCCTGGGCTCATATGCAC 58.245 61.111 4.12 0.00 38.26 4.57
2368 2419 1.900498 GCCTGGGCTCATATGCACC 60.900 63.158 4.12 1.44 35.05 5.01
2369 2420 1.842007 CCTGGGCTCATATGCACCT 59.158 57.895 12.06 0.00 35.05 4.00
2370 2421 0.536687 CCTGGGCTCATATGCACCTG 60.537 60.000 12.06 10.34 35.05 4.00
2371 2422 0.182061 CTGGGCTCATATGCACCTGT 59.818 55.000 12.06 0.00 35.05 4.00
2372 2423 0.107066 TGGGCTCATATGCACCTGTG 60.107 55.000 12.06 0.00 35.05 3.66
2408 2459 6.292596 GCGCTGATAGAAGAGTTTTATTCCAG 60.293 42.308 0.00 0.00 0.00 3.86
2455 2507 0.952280 GAGATCCTCGATACACGGCA 59.048 55.000 0.00 0.00 42.82 5.69
2480 2532 2.803479 GCCAAGCCATACAGCAGC 59.197 61.111 0.00 0.00 34.23 5.25
2523 2576 0.107654 GGGCCAAACGATCTGCTACT 60.108 55.000 4.39 0.00 0.00 2.57
2907 2962 3.616560 GCTTCGACCATGGTTGAACTCTA 60.617 47.826 34.68 19.90 41.90 2.43
2914 2969 2.024176 TGGTTGAACTCTAGCCTCCA 57.976 50.000 0.00 0.00 0.00 3.86
2919 2974 0.971447 GAACTCTAGCCTCCACCCGT 60.971 60.000 0.00 0.00 0.00 5.28
2964 3020 1.550072 ACCGGCATTTTCCCTTTGATG 59.450 47.619 0.00 0.00 0.00 3.07
2967 3023 3.450578 CGGCATTTTCCCTTTGATGATG 58.549 45.455 0.00 0.00 0.00 3.07
3003 3061 3.012959 ACCTCCTTGACAGATCTAGGGAA 59.987 47.826 9.03 0.00 45.15 3.97
3129 3187 3.526931 ACACAATCCCTCATGTACTCG 57.473 47.619 0.00 0.00 0.00 4.18
3209 3267 1.003223 GCGTGGTAAATTCCATACCGC 60.003 52.381 7.91 7.91 44.77 5.68
3318 3376 6.488006 GGCAAATGTCTCTTGTGGATATATGT 59.512 38.462 0.00 0.00 0.00 2.29
3319 3377 7.308229 GGCAAATGTCTCTTGTGGATATATGTC 60.308 40.741 0.00 0.00 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 0.095935 CAATTCTCTGTTCAGCGGCG 59.904 55.000 0.51 0.51 0.00 6.46
4 5 0.179179 GCAATTCTCTGTTCAGCGGC 60.179 55.000 0.00 0.00 0.00 6.53
6 7 1.396301 GGAGCAATTCTCTGTTCAGCG 59.604 52.381 0.00 0.00 41.60 5.18
7 8 2.430465 TGGAGCAATTCTCTGTTCAGC 58.570 47.619 0.00 0.00 41.60 4.26
8 9 5.415077 AGATTTGGAGCAATTCTCTGTTCAG 59.585 40.000 0.00 0.00 41.60 3.02
9 10 5.319453 AGATTTGGAGCAATTCTCTGTTCA 58.681 37.500 0.00 0.00 41.60 3.18
10 11 5.893897 AGATTTGGAGCAATTCTCTGTTC 57.106 39.130 0.00 0.00 41.60 3.18
11 12 5.771666 TGAAGATTTGGAGCAATTCTCTGTT 59.228 36.000 0.00 0.00 41.60 3.16
12 13 5.319453 TGAAGATTTGGAGCAATTCTCTGT 58.681 37.500 0.00 0.00 41.60 3.41
13 14 5.163642 CCTGAAGATTTGGAGCAATTCTCTG 60.164 44.000 0.00 0.00 41.60 3.35
14 15 4.948621 CCTGAAGATTTGGAGCAATTCTCT 59.051 41.667 0.00 0.00 41.60 3.10
15 16 4.704057 ACCTGAAGATTTGGAGCAATTCTC 59.296 41.667 0.00 0.00 41.15 2.87
16 17 4.670765 ACCTGAAGATTTGGAGCAATTCT 58.329 39.130 0.00 0.00 36.18 2.40
17 18 5.397142 AACCTGAAGATTTGGAGCAATTC 57.603 39.130 0.00 0.00 0.00 2.17
18 19 5.105595 GCTAACCTGAAGATTTGGAGCAATT 60.106 40.000 0.00 0.00 0.00 2.32
19 20 4.400567 GCTAACCTGAAGATTTGGAGCAAT 59.599 41.667 0.00 0.00 0.00 3.56
20 21 3.758554 GCTAACCTGAAGATTTGGAGCAA 59.241 43.478 0.00 0.00 0.00 3.91
21 22 3.347216 GCTAACCTGAAGATTTGGAGCA 58.653 45.455 0.00 0.00 0.00 4.26
22 23 2.685388 GGCTAACCTGAAGATTTGGAGC 59.315 50.000 0.00 0.00 0.00 4.70
23 24 3.691609 GTGGCTAACCTGAAGATTTGGAG 59.308 47.826 0.00 0.00 36.63 3.86
24 25 3.561313 GGTGGCTAACCTGAAGATTTGGA 60.561 47.826 2.25 0.00 46.55 3.53
25 26 2.755103 GGTGGCTAACCTGAAGATTTGG 59.245 50.000 2.25 0.00 46.55 3.28
37 38 2.215196 TGAAAACGAGTGGTGGCTAAC 58.785 47.619 0.00 0.00 0.00 2.34
38 39 2.623878 TGAAAACGAGTGGTGGCTAA 57.376 45.000 0.00 0.00 0.00 3.09
39 40 2.851263 ATGAAAACGAGTGGTGGCTA 57.149 45.000 0.00 0.00 0.00 3.93
40 41 1.981256 AATGAAAACGAGTGGTGGCT 58.019 45.000 0.00 0.00 0.00 4.75
41 42 2.793278 AAATGAAAACGAGTGGTGGC 57.207 45.000 0.00 0.00 0.00 5.01
42 43 4.300189 TCAAAATGAAAACGAGTGGTGG 57.700 40.909 0.00 0.00 0.00 4.61
43 44 6.826893 AAATCAAAATGAAAACGAGTGGTG 57.173 33.333 0.00 0.00 0.00 4.17
44 45 7.038659 TCAAAATCAAAATGAAAACGAGTGGT 58.961 30.769 0.00 0.00 0.00 4.16
45 46 7.462109 TCAAAATCAAAATGAAAACGAGTGG 57.538 32.000 0.00 0.00 0.00 4.00
46 47 8.971321 AGATCAAAATCAAAATGAAAACGAGTG 58.029 29.630 0.00 0.00 34.07 3.51
47 48 9.185192 GAGATCAAAATCAAAATGAAAACGAGT 57.815 29.630 0.00 0.00 34.07 4.18
48 49 8.360855 CGAGATCAAAATCAAAATGAAAACGAG 58.639 33.333 0.00 0.00 34.07 4.18
49 50 7.325821 CCGAGATCAAAATCAAAATGAAAACGA 59.674 33.333 0.00 0.00 34.07 3.85
50 51 7.114811 ACCGAGATCAAAATCAAAATGAAAACG 59.885 33.333 0.00 0.00 34.07 3.60
51 52 8.216453 CACCGAGATCAAAATCAAAATGAAAAC 58.784 33.333 0.00 0.00 34.07 2.43
52 53 8.140628 TCACCGAGATCAAAATCAAAATGAAAA 58.859 29.630 0.00 0.00 34.07 2.29
53 54 7.656412 TCACCGAGATCAAAATCAAAATGAAA 58.344 30.769 0.00 0.00 34.07 2.69
54 55 7.213216 TCACCGAGATCAAAATCAAAATGAA 57.787 32.000 0.00 0.00 34.07 2.57
55 56 6.816134 TCACCGAGATCAAAATCAAAATGA 57.184 33.333 0.00 0.00 34.07 2.57
56 57 6.862608 TGTTCACCGAGATCAAAATCAAAATG 59.137 34.615 0.00 0.00 34.07 2.32
57 58 6.980593 TGTTCACCGAGATCAAAATCAAAAT 58.019 32.000 0.00 0.00 34.07 1.82
58 59 6.384258 TGTTCACCGAGATCAAAATCAAAA 57.616 33.333 0.00 0.00 34.07 2.44
59 60 6.573664 ATGTTCACCGAGATCAAAATCAAA 57.426 33.333 0.00 0.00 34.07 2.69
60 61 6.652900 TGTATGTTCACCGAGATCAAAATCAA 59.347 34.615 0.00 0.00 34.07 2.57
61 62 6.169800 TGTATGTTCACCGAGATCAAAATCA 58.830 36.000 0.00 0.00 34.07 2.57
62 63 6.238211 CCTGTATGTTCACCGAGATCAAAATC 60.238 42.308 0.00 0.00 30.23 2.17
63 64 5.586243 CCTGTATGTTCACCGAGATCAAAAT 59.414 40.000 0.00 0.00 30.23 1.82
64 65 4.935205 CCTGTATGTTCACCGAGATCAAAA 59.065 41.667 0.00 0.00 30.23 2.44
65 66 4.221924 TCCTGTATGTTCACCGAGATCAAA 59.778 41.667 0.00 0.00 30.23 2.69
66 67 3.767131 TCCTGTATGTTCACCGAGATCAA 59.233 43.478 0.00 0.00 30.23 2.57
67 68 3.361786 TCCTGTATGTTCACCGAGATCA 58.638 45.455 0.00 0.00 0.00 2.92
68 69 4.386867 TTCCTGTATGTTCACCGAGATC 57.613 45.455 0.00 0.00 0.00 2.75
69 70 4.405680 TCATTCCTGTATGTTCACCGAGAT 59.594 41.667 0.00 0.00 0.00 2.75
70 71 3.767131 TCATTCCTGTATGTTCACCGAGA 59.233 43.478 0.00 0.00 0.00 4.04
71 72 4.123497 TCATTCCTGTATGTTCACCGAG 57.877 45.455 0.00 0.00 0.00 4.63
72 73 4.250464 GTTCATTCCTGTATGTTCACCGA 58.750 43.478 0.00 0.00 0.00 4.69
73 74 3.062099 CGTTCATTCCTGTATGTTCACCG 59.938 47.826 0.00 0.00 0.00 4.94
74 75 4.092968 GTCGTTCATTCCTGTATGTTCACC 59.907 45.833 0.00 0.00 0.00 4.02
75 76 4.092968 GGTCGTTCATTCCTGTATGTTCAC 59.907 45.833 0.00 0.00 0.00 3.18
76 77 4.250464 GGTCGTTCATTCCTGTATGTTCA 58.750 43.478 0.00 0.00 0.00 3.18
77 78 3.306166 CGGTCGTTCATTCCTGTATGTTC 59.694 47.826 0.00 0.00 0.00 3.18
78 79 3.259064 CGGTCGTTCATTCCTGTATGTT 58.741 45.455 0.00 0.00 0.00 2.71
79 80 2.418197 CCGGTCGTTCATTCCTGTATGT 60.418 50.000 0.00 0.00 0.00 2.29
80 81 2.201732 CCGGTCGTTCATTCCTGTATG 58.798 52.381 0.00 0.00 0.00 2.39
81 82 1.138266 CCCGGTCGTTCATTCCTGTAT 59.862 52.381 0.00 0.00 0.00 2.29
82 83 0.533491 CCCGGTCGTTCATTCCTGTA 59.467 55.000 0.00 0.00 0.00 2.74
83 84 1.189524 TCCCGGTCGTTCATTCCTGT 61.190 55.000 0.00 0.00 0.00 4.00
84 85 0.460284 CTCCCGGTCGTTCATTCCTG 60.460 60.000 0.00 0.00 0.00 3.86
85 86 0.903454 ACTCCCGGTCGTTCATTCCT 60.903 55.000 0.00 0.00 0.00 3.36
86 87 0.036671 AACTCCCGGTCGTTCATTCC 60.037 55.000 0.00 0.00 0.00 3.01
87 88 1.356938 GAACTCCCGGTCGTTCATTC 58.643 55.000 21.50 4.70 39.36 2.67
88 89 0.036671 GGAACTCCCGGTCGTTCATT 60.037 55.000 25.27 2.60 40.88 2.57
89 90 1.595357 GGAACTCCCGGTCGTTCAT 59.405 57.895 25.27 0.34 40.88 2.57
90 91 3.053828 GGAACTCCCGGTCGTTCA 58.946 61.111 25.27 0.00 40.88 3.18
100 101 0.318441 GGCAAAAGCTTGGGAACTCC 59.682 55.000 0.00 0.00 32.76 3.85
101 102 1.039856 TGGCAAAAGCTTGGGAACTC 58.960 50.000 0.00 0.00 32.76 3.01
102 103 0.752658 GTGGCAAAAGCTTGGGAACT 59.247 50.000 0.00 0.00 32.76 3.01
103 104 0.463620 TGTGGCAAAAGCTTGGGAAC 59.536 50.000 0.00 0.00 32.76 3.62
104 105 0.752054 CTGTGGCAAAAGCTTGGGAA 59.248 50.000 0.00 0.00 32.76 3.97
105 106 0.396974 ACTGTGGCAAAAGCTTGGGA 60.397 50.000 0.00 0.00 32.76 4.37
106 107 0.032540 GACTGTGGCAAAAGCTTGGG 59.967 55.000 0.00 0.00 32.76 4.12
107 108 1.000938 GAGACTGTGGCAAAAGCTTGG 60.001 52.381 0.00 0.00 32.76 3.61
108 109 1.677576 TGAGACTGTGGCAAAAGCTTG 59.322 47.619 0.00 0.00 35.49 4.01
109 110 2.057137 TGAGACTGTGGCAAAAGCTT 57.943 45.000 0.00 0.00 0.00 3.74
110 111 1.884579 CATGAGACTGTGGCAAAAGCT 59.115 47.619 0.00 0.00 0.00 3.74
111 112 1.068055 CCATGAGACTGTGGCAAAAGC 60.068 52.381 0.00 0.00 0.00 3.51
112 113 2.507484 TCCATGAGACTGTGGCAAAAG 58.493 47.619 0.00 0.00 35.43 2.27
113 114 2.655090 TCCATGAGACTGTGGCAAAA 57.345 45.000 0.00 0.00 35.43 2.44
114 115 2.158623 ACTTCCATGAGACTGTGGCAAA 60.159 45.455 0.00 0.00 35.43 3.68
115 116 1.421268 ACTTCCATGAGACTGTGGCAA 59.579 47.619 0.00 0.00 35.43 4.52
116 117 1.059098 ACTTCCATGAGACTGTGGCA 58.941 50.000 0.00 0.00 35.43 4.92
117 118 1.002430 TCACTTCCATGAGACTGTGGC 59.998 52.381 0.00 0.00 35.43 5.01
125 126 4.217118 CCAAGTTTTCCTCACTTCCATGAG 59.783 45.833 0.00 0.00 44.91 2.90
126 127 4.144297 CCAAGTTTTCCTCACTTCCATGA 58.856 43.478 0.00 0.00 31.83 3.07
127 128 3.305608 GCCAAGTTTTCCTCACTTCCATG 60.306 47.826 0.00 0.00 31.83 3.66
128 129 2.893489 GCCAAGTTTTCCTCACTTCCAT 59.107 45.455 0.00 0.00 31.83 3.41
129 130 2.306847 GCCAAGTTTTCCTCACTTCCA 58.693 47.619 0.00 0.00 31.83 3.53
130 131 1.613925 GGCCAAGTTTTCCTCACTTCC 59.386 52.381 0.00 0.00 31.83 3.46
131 132 2.306847 TGGCCAAGTTTTCCTCACTTC 58.693 47.619 0.61 0.00 31.83 3.01
132 133 2.452600 TGGCCAAGTTTTCCTCACTT 57.547 45.000 0.61 0.00 34.67 3.16
133 134 2.452600 TTGGCCAAGTTTTCCTCACT 57.547 45.000 16.05 0.00 0.00 3.41
134 135 3.457234 CTTTTGGCCAAGTTTTCCTCAC 58.543 45.455 19.48 0.00 0.00 3.51
135 136 2.158971 GCTTTTGGCCAAGTTTTCCTCA 60.159 45.455 19.48 0.00 34.27 3.86
136 137 2.103094 AGCTTTTGGCCAAGTTTTCCTC 59.897 45.455 19.48 3.67 43.05 3.71
137 138 2.103094 GAGCTTTTGGCCAAGTTTTCCT 59.897 45.455 19.48 10.17 43.05 3.36
138 139 2.103094 AGAGCTTTTGGCCAAGTTTTCC 59.897 45.455 19.48 7.89 43.05 3.13
139 140 3.181476 TGAGAGCTTTTGGCCAAGTTTTC 60.181 43.478 19.48 14.84 43.05 2.29
140 141 2.765699 TGAGAGCTTTTGGCCAAGTTTT 59.234 40.909 19.48 6.31 43.05 2.43
141 142 2.387757 TGAGAGCTTTTGGCCAAGTTT 58.612 42.857 19.48 5.92 43.05 2.66
142 143 2.071778 TGAGAGCTTTTGGCCAAGTT 57.928 45.000 19.48 5.79 43.05 2.66
143 144 2.299326 ATGAGAGCTTTTGGCCAAGT 57.701 45.000 19.48 4.80 43.05 3.16
144 145 4.996788 AATATGAGAGCTTTTGGCCAAG 57.003 40.909 19.48 9.41 43.05 3.61
145 146 4.771577 TCAAATATGAGAGCTTTTGGCCAA 59.228 37.500 16.05 16.05 43.05 4.52
146 147 4.343231 TCAAATATGAGAGCTTTTGGCCA 58.657 39.130 0.00 0.00 43.05 5.36
147 148 4.989279 TCAAATATGAGAGCTTTTGGCC 57.011 40.909 0.00 0.00 43.05 5.36
148 149 6.803642 AGATTCAAATATGAGAGCTTTTGGC 58.196 36.000 6.49 0.00 36.78 4.52
149 150 7.222224 GCAAGATTCAAATATGAGAGCTTTTGG 59.778 37.037 6.49 0.00 36.78 3.28
150 151 7.222224 GGCAAGATTCAAATATGAGAGCTTTTG 59.778 37.037 0.00 0.00 36.78 2.44
151 152 7.123847 AGGCAAGATTCAAATATGAGAGCTTTT 59.876 33.333 0.00 0.00 36.78 2.27
152 153 6.606395 AGGCAAGATTCAAATATGAGAGCTTT 59.394 34.615 0.00 0.00 36.78 3.51
153 154 6.127793 AGGCAAGATTCAAATATGAGAGCTT 58.872 36.000 0.00 0.00 36.78 3.74
154 155 5.692928 AGGCAAGATTCAAATATGAGAGCT 58.307 37.500 0.00 0.00 36.78 4.09
155 156 6.388435 AAGGCAAGATTCAAATATGAGAGC 57.612 37.500 0.00 0.00 36.78 4.09
156 157 9.894783 CATAAAGGCAAGATTCAAATATGAGAG 57.105 33.333 0.00 0.00 36.78 3.20
157 158 9.412460 ACATAAAGGCAAGATTCAAATATGAGA 57.588 29.630 0.00 0.00 36.78 3.27
158 159 9.459640 CACATAAAGGCAAGATTCAAATATGAG 57.540 33.333 0.00 0.00 36.78 2.90
159 160 7.922278 GCACATAAAGGCAAGATTCAAATATGA 59.078 33.333 0.00 0.00 0.00 2.15
160 161 7.096353 CGCACATAAAGGCAAGATTCAAATATG 60.096 37.037 0.00 0.00 0.00 1.78
161 162 6.919662 CGCACATAAAGGCAAGATTCAAATAT 59.080 34.615 0.00 0.00 0.00 1.28
162 163 6.264832 CGCACATAAAGGCAAGATTCAAATA 58.735 36.000 0.00 0.00 0.00 1.40
163 164 5.104374 CGCACATAAAGGCAAGATTCAAAT 58.896 37.500 0.00 0.00 0.00 2.32
164 165 4.484236 CGCACATAAAGGCAAGATTCAAA 58.516 39.130 0.00 0.00 0.00 2.69
165 166 3.119531 CCGCACATAAAGGCAAGATTCAA 60.120 43.478 0.00 0.00 0.00 2.69
166 167 2.423185 CCGCACATAAAGGCAAGATTCA 59.577 45.455 0.00 0.00 0.00 2.57
167 168 2.223572 CCCGCACATAAAGGCAAGATTC 60.224 50.000 0.00 0.00 0.00 2.52
168 169 1.750778 CCCGCACATAAAGGCAAGATT 59.249 47.619 0.00 0.00 0.00 2.40
169 170 1.392589 CCCGCACATAAAGGCAAGAT 58.607 50.000 0.00 0.00 0.00 2.40
170 171 0.679640 CCCCGCACATAAAGGCAAGA 60.680 55.000 0.00 0.00 0.00 3.02
171 172 1.809207 CCCCGCACATAAAGGCAAG 59.191 57.895 0.00 0.00 0.00 4.01
172 173 2.347322 GCCCCGCACATAAAGGCAA 61.347 57.895 0.00 0.00 43.32 4.52
173 174 2.753849 GCCCCGCACATAAAGGCA 60.754 61.111 0.00 0.00 43.32 4.75
174 175 3.527427 GGCCCCGCACATAAAGGC 61.527 66.667 0.00 0.00 43.09 4.35
175 176 2.044451 TGGCCCCGCACATAAAGG 60.044 61.111 0.00 0.00 0.00 3.11
176 177 1.656818 CTGTGGCCCCGCACATAAAG 61.657 60.000 0.00 0.00 32.59 1.85
177 178 1.677300 CTGTGGCCCCGCACATAAA 60.677 57.895 0.00 0.00 32.59 1.40
178 179 2.045438 CTGTGGCCCCGCACATAA 60.045 61.111 0.00 0.00 32.59 1.90
179 180 3.006133 TCTGTGGCCCCGCACATA 61.006 61.111 0.00 0.00 32.59 2.29
180 181 4.415150 CTCTGTGGCCCCGCACAT 62.415 66.667 0.00 0.00 32.59 3.21
190 191 2.290514 TGATTTCTTGCCTCCTCTGTGG 60.291 50.000 0.00 0.00 37.10 4.17
191 192 3.008330 CTGATTTCTTGCCTCCTCTGTG 58.992 50.000 0.00 0.00 0.00 3.66
192 193 2.641815 ACTGATTTCTTGCCTCCTCTGT 59.358 45.455 0.00 0.00 0.00 3.41
193 194 3.008330 CACTGATTTCTTGCCTCCTCTG 58.992 50.000 0.00 0.00 0.00 3.35
194 195 2.026449 CCACTGATTTCTTGCCTCCTCT 60.026 50.000 0.00 0.00 0.00 3.69
195 196 2.363683 CCACTGATTTCTTGCCTCCTC 58.636 52.381 0.00 0.00 0.00 3.71
196 197 1.005215 CCCACTGATTTCTTGCCTCCT 59.995 52.381 0.00 0.00 0.00 3.69
197 198 1.467920 CCCACTGATTTCTTGCCTCC 58.532 55.000 0.00 0.00 0.00 4.30
198 199 0.813821 GCCCACTGATTTCTTGCCTC 59.186 55.000 0.00 0.00 0.00 4.70
199 200 0.112995 TGCCCACTGATTTCTTGCCT 59.887 50.000 0.00 0.00 0.00 4.75
200 201 0.968405 TTGCCCACTGATTTCTTGCC 59.032 50.000 0.00 0.00 0.00 4.52
201 202 2.613691 CATTGCCCACTGATTTCTTGC 58.386 47.619 0.00 0.00 0.00 4.01
202 203 2.564062 ACCATTGCCCACTGATTTCTTG 59.436 45.455 0.00 0.00 0.00 3.02
203 204 2.827921 GACCATTGCCCACTGATTTCTT 59.172 45.455 0.00 0.00 0.00 2.52
204 205 2.042162 AGACCATTGCCCACTGATTTCT 59.958 45.455 0.00 0.00 0.00 2.52
205 206 2.165030 CAGACCATTGCCCACTGATTTC 59.835 50.000 0.00 0.00 0.00 2.17
206 207 2.173519 CAGACCATTGCCCACTGATTT 58.826 47.619 0.00 0.00 0.00 2.17
207 208 1.355381 TCAGACCATTGCCCACTGATT 59.645 47.619 0.00 0.00 33.57 2.57
208 209 0.994247 TCAGACCATTGCCCACTGAT 59.006 50.000 0.00 0.00 33.57 2.90
209 210 0.770499 TTCAGACCATTGCCCACTGA 59.230 50.000 0.00 0.00 36.11 3.41
210 211 1.270550 GTTTCAGACCATTGCCCACTG 59.729 52.381 0.00 0.00 0.00 3.66
211 212 1.145738 AGTTTCAGACCATTGCCCACT 59.854 47.619 0.00 0.00 0.00 4.00
212 213 1.270550 CAGTTTCAGACCATTGCCCAC 59.729 52.381 0.00 0.00 0.00 4.61
213 214 1.144708 TCAGTTTCAGACCATTGCCCA 59.855 47.619 0.00 0.00 0.00 5.36
214 215 1.909700 TCAGTTTCAGACCATTGCCC 58.090 50.000 0.00 0.00 0.00 5.36
215 216 2.821969 ACATCAGTTTCAGACCATTGCC 59.178 45.455 0.00 0.00 0.00 4.52
216 217 4.937620 TCTACATCAGTTTCAGACCATTGC 59.062 41.667 0.00 0.00 0.00 3.56
217 218 6.457934 GCATCTACATCAGTTTCAGACCATTG 60.458 42.308 0.00 0.00 0.00 2.82
218 219 5.587844 GCATCTACATCAGTTTCAGACCATT 59.412 40.000 0.00 0.00 0.00 3.16
219 220 5.121811 GCATCTACATCAGTTTCAGACCAT 58.878 41.667 0.00 0.00 0.00 3.55
220 221 4.020307 TGCATCTACATCAGTTTCAGACCA 60.020 41.667 0.00 0.00 0.00 4.02
221 222 4.507710 TGCATCTACATCAGTTTCAGACC 58.492 43.478 0.00 0.00 0.00 3.85
222 223 4.033817 GCTGCATCTACATCAGTTTCAGAC 59.966 45.833 0.00 0.00 0.00 3.51
223 224 4.186926 GCTGCATCTACATCAGTTTCAGA 58.813 43.478 0.00 0.00 0.00 3.27
224 225 3.311871 GGCTGCATCTACATCAGTTTCAG 59.688 47.826 0.50 0.00 0.00 3.02
225 226 3.273434 GGCTGCATCTACATCAGTTTCA 58.727 45.455 0.50 0.00 0.00 2.69
226 227 3.273434 TGGCTGCATCTACATCAGTTTC 58.727 45.455 0.50 0.00 0.00 2.78
227 228 3.354948 TGGCTGCATCTACATCAGTTT 57.645 42.857 0.50 0.00 0.00 2.66
228 229 3.118149 TCATGGCTGCATCTACATCAGTT 60.118 43.478 0.50 0.00 0.00 3.16
229 230 2.436911 TCATGGCTGCATCTACATCAGT 59.563 45.455 0.50 0.00 0.00 3.41
230 231 3.067833 CTCATGGCTGCATCTACATCAG 58.932 50.000 0.50 0.00 0.00 2.90
231 232 2.809299 GCTCATGGCTGCATCTACATCA 60.809 50.000 0.50 0.00 38.06 3.07
232 233 1.805345 GCTCATGGCTGCATCTACATC 59.195 52.381 0.50 0.00 38.06 3.06
233 234 1.142262 TGCTCATGGCTGCATCTACAT 59.858 47.619 0.50 0.00 42.39 2.29
234 235 0.542805 TGCTCATGGCTGCATCTACA 59.457 50.000 0.50 0.00 42.39 2.74
235 236 1.227639 CTGCTCATGGCTGCATCTAC 58.772 55.000 0.50 0.00 42.39 2.59
236 237 0.108019 CCTGCTCATGGCTGCATCTA 59.892 55.000 0.50 0.00 42.39 1.98
237 238 1.152943 CCTGCTCATGGCTGCATCT 60.153 57.895 0.50 0.00 42.39 2.90
238 239 2.846652 GCCTGCTCATGGCTGCATC 61.847 63.158 0.50 0.00 46.38 3.91
239 240 2.833582 GCCTGCTCATGGCTGCAT 60.834 61.111 0.50 0.00 46.38 3.96
245 246 2.192443 CCTCCTGCCTGCTCATGG 59.808 66.667 0.00 0.00 0.00 3.66
246 247 2.192443 CCCTCCTGCCTGCTCATG 59.808 66.667 0.00 0.00 0.00 3.07
247 248 3.095163 CCCCTCCTGCCTGCTCAT 61.095 66.667 0.00 0.00 0.00 2.90
248 249 3.870607 TTCCCCTCCTGCCTGCTCA 62.871 63.158 0.00 0.00 0.00 4.26
249 250 3.011517 TTCCCCTCCTGCCTGCTC 61.012 66.667 0.00 0.00 0.00 4.26
250 251 3.013932 CTTCCCCTCCTGCCTGCT 61.014 66.667 0.00 0.00 0.00 4.24
251 252 4.120755 CCTTCCCCTCCTGCCTGC 62.121 72.222 0.00 0.00 0.00 4.85
252 253 2.285668 TCCTTCCCCTCCTGCCTG 60.286 66.667 0.00 0.00 0.00 4.85
253 254 2.285743 GTCCTTCCCCTCCTGCCT 60.286 66.667 0.00 0.00 0.00 4.75
254 255 2.610859 TGTCCTTCCCCTCCTGCC 60.611 66.667 0.00 0.00 0.00 4.85
255 256 2.671682 GTGTCCTTCCCCTCCTGC 59.328 66.667 0.00 0.00 0.00 4.85
256 257 1.229658 AGGTGTCCTTCCCCTCCTG 60.230 63.158 0.00 0.00 0.00 3.86
257 258 1.081277 GAGGTGTCCTTCCCCTCCT 59.919 63.158 0.00 0.00 39.10 3.69
258 259 3.728772 GAGGTGTCCTTCCCCTCC 58.271 66.667 0.00 0.00 39.10 4.30
259 260 3.728772 GGAGGTGTCCTTCCCCTC 58.271 66.667 0.00 0.00 43.35 4.30
267 268 0.181350 CATTGCCCTAGGAGGTGTCC 59.819 60.000 11.48 0.00 44.33 4.02
268 269 0.912486 ACATTGCCCTAGGAGGTGTC 59.088 55.000 11.48 0.00 31.93 3.67
269 270 1.004745 CAACATTGCCCTAGGAGGTGT 59.995 52.381 11.48 6.79 31.93 4.16
270 271 1.755179 CAACATTGCCCTAGGAGGTG 58.245 55.000 11.48 6.13 31.93 4.00
279 280 7.416664 TAGATAAATTCTTCTGCAACATTGCCC 60.417 37.037 13.81 0.00 43.48 5.36
280 281 7.483307 TAGATAAATTCTTCTGCAACATTGCC 58.517 34.615 13.81 0.00 43.48 4.52
281 282 8.965172 CATAGATAAATTCTTCTGCAACATTGC 58.035 33.333 9.70 9.70 43.94 3.56
282 283 8.965172 GCATAGATAAATTCTTCTGCAACATTG 58.035 33.333 0.00 0.00 39.70 2.82
283 284 8.689061 TGCATAGATAAATTCTTCTGCAACATT 58.311 29.630 8.97 0.00 43.36 2.71
284 285 8.229253 TGCATAGATAAATTCTTCTGCAACAT 57.771 30.769 8.97 0.00 43.36 2.71
285 286 7.628769 TGCATAGATAAATTCTTCTGCAACA 57.371 32.000 8.97 0.00 43.36 3.33
286 287 6.636044 GCTGCATAGATAAATTCTTCTGCAAC 59.364 38.462 11.29 6.05 44.52 4.17
287 288 6.319405 TGCTGCATAGATAAATTCTTCTGCAA 59.681 34.615 0.00 0.26 44.52 4.08
288 289 5.824097 TGCTGCATAGATAAATTCTTCTGCA 59.176 36.000 0.00 10.28 43.75 4.41
289 290 6.309712 TGCTGCATAGATAAATTCTTCTGC 57.690 37.500 0.00 0.00 40.06 4.26
290 291 6.072618 CCCTGCTGCATAGATAAATTCTTCTG 60.073 42.308 1.31 0.00 35.79 3.02
291 292 6.002704 CCCTGCTGCATAGATAAATTCTTCT 58.997 40.000 1.31 0.00 35.79 2.85
292 293 5.335504 GCCCTGCTGCATAGATAAATTCTTC 60.336 44.000 1.31 0.00 35.79 2.87
293 294 4.522022 GCCCTGCTGCATAGATAAATTCTT 59.478 41.667 1.31 0.00 35.79 2.52
294 295 4.077822 GCCCTGCTGCATAGATAAATTCT 58.922 43.478 1.31 0.00 38.57 2.40
295 296 3.120060 CGCCCTGCTGCATAGATAAATTC 60.120 47.826 1.31 0.00 0.00 2.17
296 297 2.816087 CGCCCTGCTGCATAGATAAATT 59.184 45.455 1.31 0.00 0.00 1.82
297 298 2.224621 ACGCCCTGCTGCATAGATAAAT 60.225 45.455 1.31 0.00 0.00 1.40
298 299 1.140852 ACGCCCTGCTGCATAGATAAA 59.859 47.619 1.31 0.00 0.00 1.40
299 300 0.758734 ACGCCCTGCTGCATAGATAA 59.241 50.000 1.31 0.00 0.00 1.75
300 301 0.758734 AACGCCCTGCTGCATAGATA 59.241 50.000 1.31 0.00 0.00 1.98
301 302 0.816825 CAACGCCCTGCTGCATAGAT 60.817 55.000 1.31 0.00 0.00 1.98
302 303 1.450134 CAACGCCCTGCTGCATAGA 60.450 57.895 1.31 0.00 0.00 1.98
303 304 2.475466 CCAACGCCCTGCTGCATAG 61.475 63.158 1.31 0.00 0.00 2.23
304 305 2.269520 ATCCAACGCCCTGCTGCATA 62.270 55.000 1.31 0.00 0.00 3.14
305 306 3.650298 ATCCAACGCCCTGCTGCAT 62.650 57.895 1.31 0.00 0.00 3.96
306 307 3.866379 AATCCAACGCCCTGCTGCA 62.866 57.895 0.88 0.88 0.00 4.41
307 308 2.158561 AAAATCCAACGCCCTGCTGC 62.159 55.000 0.00 0.00 0.00 5.25
308 309 0.109132 GAAAATCCAACGCCCTGCTG 60.109 55.000 0.00 0.00 0.00 4.41
309 310 1.250840 GGAAAATCCAACGCCCTGCT 61.251 55.000 0.00 0.00 36.28 4.24
310 311 1.215382 GGAAAATCCAACGCCCTGC 59.785 57.895 0.00 0.00 36.28 4.85
311 312 1.890174 GGGAAAATCCAACGCCCTG 59.110 57.895 0.00 0.00 38.64 4.45
312 313 1.774300 AGGGAAAATCCAACGCCCT 59.226 52.632 0.00 0.00 44.17 5.19
313 314 0.323451 AGAGGGAAAATCCAACGCCC 60.323 55.000 0.00 0.00 38.64 6.13
314 315 1.095600 GAGAGGGAAAATCCAACGCC 58.904 55.000 0.00 0.00 38.64 5.68
315 316 0.727398 CGAGAGGGAAAATCCAACGC 59.273 55.000 0.00 0.00 38.64 4.84
316 317 0.727398 GCGAGAGGGAAAATCCAACG 59.273 55.000 0.00 0.00 38.64 4.10
317 318 2.115343 AGCGAGAGGGAAAATCCAAC 57.885 50.000 0.00 0.00 38.64 3.77
318 319 2.039746 TCAAGCGAGAGGGAAAATCCAA 59.960 45.455 0.00 0.00 38.64 3.53
319 320 1.628340 TCAAGCGAGAGGGAAAATCCA 59.372 47.619 0.00 0.00 38.64 3.41
320 321 2.010497 GTCAAGCGAGAGGGAAAATCC 58.990 52.381 0.00 0.00 35.23 3.01
321 322 2.010497 GGTCAAGCGAGAGGGAAAATC 58.990 52.381 0.00 0.00 0.00 2.17
322 323 1.351017 TGGTCAAGCGAGAGGGAAAAT 59.649 47.619 0.00 0.00 0.00 1.82
323 324 0.762418 TGGTCAAGCGAGAGGGAAAA 59.238 50.000 0.00 0.00 0.00 2.29
324 325 0.984230 ATGGTCAAGCGAGAGGGAAA 59.016 50.000 0.00 0.00 0.00 3.13
325 326 0.250234 CATGGTCAAGCGAGAGGGAA 59.750 55.000 0.00 0.00 0.00 3.97
326 327 0.904865 ACATGGTCAAGCGAGAGGGA 60.905 55.000 0.00 0.00 0.00 4.20
327 328 0.036010 AACATGGTCAAGCGAGAGGG 60.036 55.000 0.00 0.00 0.00 4.30
328 329 2.672961 TAACATGGTCAAGCGAGAGG 57.327 50.000 0.00 0.00 0.00 3.69
329 330 5.985530 TCATATTAACATGGTCAAGCGAGAG 59.014 40.000 0.00 0.00 0.00 3.20
330 331 5.912892 TCATATTAACATGGTCAAGCGAGA 58.087 37.500 0.00 0.00 0.00 4.04
331 332 5.755375 ACTCATATTAACATGGTCAAGCGAG 59.245 40.000 0.00 0.00 0.00 5.03
332 333 5.670485 ACTCATATTAACATGGTCAAGCGA 58.330 37.500 0.00 0.00 0.00 4.93
333 334 5.991328 ACTCATATTAACATGGTCAAGCG 57.009 39.130 0.00 0.00 0.00 4.68
334 335 7.928706 AGACTACTCATATTAACATGGTCAAGC 59.071 37.037 0.00 0.00 0.00 4.01
368 369 6.109359 GTGGTGTGAGAGCTTGACTTAATAT 58.891 40.000 0.00 0.00 0.00 1.28
379 380 2.532854 ACAAGGTGGTGTGAGAGCT 58.467 52.632 0.00 0.00 0.00 4.09
420 422 0.178975 TCAAAAGCATGGGTTCGGGT 60.179 50.000 0.00 0.00 0.00 5.28
509 511 6.150332 TCATTATGGGTCTCAGGGATTCTTA 58.850 40.000 0.00 0.00 0.00 2.10
510 512 4.977739 TCATTATGGGTCTCAGGGATTCTT 59.022 41.667 0.00 0.00 0.00 2.52
517 519 6.286240 TCGATTATCATTATGGGTCTCAGG 57.714 41.667 0.00 0.00 0.00 3.86
519 521 6.016555 TCCTCGATTATCATTATGGGTCTCA 58.983 40.000 0.00 0.00 0.00 3.27
560 602 2.366266 ACAGGCAACATTTGAAGTGCAT 59.634 40.909 0.00 0.00 41.41 3.96
568 610 4.411327 CCGTAATGTACAGGCAACATTTG 58.589 43.478 15.08 9.97 43.31 2.32
614 656 0.454600 GCATCTACAACCGGACTCGA 59.545 55.000 9.46 0.00 39.00 4.04
641 691 7.711339 AAGTCTACTTAGGTGTAGCATTATTGC 59.289 37.037 1.25 1.25 40.88 3.56
644 694 8.566260 CGTAAGTCTACTTAGGTGTAGCATTAT 58.434 37.037 12.31 0.00 38.94 1.28
645 695 7.923888 CGTAAGTCTACTTAGGTGTAGCATTA 58.076 38.462 12.31 0.00 38.94 1.90
646 696 6.793349 CGTAAGTCTACTTAGGTGTAGCATT 58.207 40.000 12.31 0.00 38.94 3.56
647 697 6.374565 CGTAAGTCTACTTAGGTGTAGCAT 57.625 41.667 12.31 0.00 38.94 3.79
648 698 5.808042 CGTAAGTCTACTTAGGTGTAGCA 57.192 43.478 12.31 0.00 38.94 3.49
669 719 4.261114 GGAAGATTACGTAGGAGGAGAACG 60.261 50.000 0.00 0.00 42.17 3.95
670 720 4.888823 AGGAAGATTACGTAGGAGGAGAAC 59.111 45.833 0.00 0.00 0.00 3.01
671 721 5.126699 AGGAAGATTACGTAGGAGGAGAA 57.873 43.478 0.00 0.00 0.00 2.87
672 722 4.792513 AGGAAGATTACGTAGGAGGAGA 57.207 45.455 0.00 0.00 0.00 3.71
673 723 5.826737 TGTTAGGAAGATTACGTAGGAGGAG 59.173 44.000 0.00 0.00 0.00 3.69
674 724 5.759059 TGTTAGGAAGATTACGTAGGAGGA 58.241 41.667 0.00 0.00 0.00 3.71
675 725 6.461110 TTGTTAGGAAGATTACGTAGGAGG 57.539 41.667 0.00 0.00 0.00 4.30
676 726 6.755607 GGTTTGTTAGGAAGATTACGTAGGAG 59.244 42.308 0.00 0.00 0.00 3.69
677 727 6.438425 AGGTTTGTTAGGAAGATTACGTAGGA 59.562 38.462 0.00 0.00 0.00 2.94
678 728 6.637657 AGGTTTGTTAGGAAGATTACGTAGG 58.362 40.000 0.00 0.00 0.00 3.18
679 729 7.545489 AGAGGTTTGTTAGGAAGATTACGTAG 58.455 38.462 0.00 0.00 0.00 3.51
680 730 7.363268 GGAGAGGTTTGTTAGGAAGATTACGTA 60.363 40.741 0.00 0.00 0.00 3.57
681 731 6.356186 AGAGGTTTGTTAGGAAGATTACGT 57.644 37.500 0.00 0.00 0.00 3.57
682 732 5.811100 GGAGAGGTTTGTTAGGAAGATTACG 59.189 44.000 0.00 0.00 0.00 3.18
683 733 6.594547 GTGGAGAGGTTTGTTAGGAAGATTAC 59.405 42.308 0.00 0.00 0.00 1.89
684 734 6.296259 GGTGGAGAGGTTTGTTAGGAAGATTA 60.296 42.308 0.00 0.00 0.00 1.75
685 735 5.515008 GGTGGAGAGGTTTGTTAGGAAGATT 60.515 44.000 0.00 0.00 0.00 2.40
686 736 4.019231 GGTGGAGAGGTTTGTTAGGAAGAT 60.019 45.833 0.00 0.00 0.00 2.40
687 737 3.326880 GGTGGAGAGGTTTGTTAGGAAGA 59.673 47.826 0.00 0.00 0.00 2.87
688 738 3.559384 GGGTGGAGAGGTTTGTTAGGAAG 60.559 52.174 0.00 0.00 0.00 3.46
689 739 2.374170 GGGTGGAGAGGTTTGTTAGGAA 59.626 50.000 0.00 0.00 0.00 3.36
690 740 1.982958 GGGTGGAGAGGTTTGTTAGGA 59.017 52.381 0.00 0.00 0.00 2.94
691 741 1.004394 GGGGTGGAGAGGTTTGTTAGG 59.996 57.143 0.00 0.00 0.00 2.69
692 742 1.985895 AGGGGTGGAGAGGTTTGTTAG 59.014 52.381 0.00 0.00 0.00 2.34
693 743 1.702957 CAGGGGTGGAGAGGTTTGTTA 59.297 52.381 0.00 0.00 0.00 2.41
694 744 0.478507 CAGGGGTGGAGAGGTTTGTT 59.521 55.000 0.00 0.00 0.00 2.83
695 745 0.401395 TCAGGGGTGGAGAGGTTTGT 60.401 55.000 0.00 0.00 0.00 2.83
696 746 0.995024 ATCAGGGGTGGAGAGGTTTG 59.005 55.000 0.00 0.00 0.00 2.93
697 747 1.760405 AATCAGGGGTGGAGAGGTTT 58.240 50.000 0.00 0.00 0.00 3.27
698 748 1.636003 GAAATCAGGGGTGGAGAGGTT 59.364 52.381 0.00 0.00 0.00 3.50
699 749 1.290134 GAAATCAGGGGTGGAGAGGT 58.710 55.000 0.00 0.00 0.00 3.85
700 750 1.289160 TGAAATCAGGGGTGGAGAGG 58.711 55.000 0.00 0.00 0.00 3.69
701 751 2.307098 ACTTGAAATCAGGGGTGGAGAG 59.693 50.000 0.00 0.00 0.00 3.20
702 752 2.040278 CACTTGAAATCAGGGGTGGAGA 59.960 50.000 0.00 0.00 0.00 3.71
703 753 2.440409 CACTTGAAATCAGGGGTGGAG 58.560 52.381 0.00 0.00 0.00 3.86
704 754 1.075374 CCACTTGAAATCAGGGGTGGA 59.925 52.381 18.70 0.00 41.11 4.02
705 755 1.075374 TCCACTTGAAATCAGGGGTGG 59.925 52.381 17.99 17.99 40.57 4.61
706 756 2.584835 TCCACTTGAAATCAGGGGTG 57.415 50.000 0.00 2.87 0.00 4.61
707 757 2.291800 CCATCCACTTGAAATCAGGGGT 60.292 50.000 0.00 0.00 0.00 4.95
708 758 2.381911 CCATCCACTTGAAATCAGGGG 58.618 52.381 0.00 0.00 0.00 4.79
709 759 1.753073 GCCATCCACTTGAAATCAGGG 59.247 52.381 0.00 0.00 0.00 4.45
710 760 1.753073 GGCCATCCACTTGAAATCAGG 59.247 52.381 0.00 0.00 0.00 3.86
711 761 1.753073 GGGCCATCCACTTGAAATCAG 59.247 52.381 4.39 0.00 35.00 2.90
712 762 1.619432 GGGGCCATCCACTTGAAATCA 60.619 52.381 4.39 0.00 37.22 2.57
713 763 1.114627 GGGGCCATCCACTTGAAATC 58.885 55.000 4.39 0.00 37.22 2.17
714 764 0.325577 GGGGGCCATCCACTTGAAAT 60.326 55.000 4.39 0.00 35.56 2.17
715 765 1.078347 GGGGGCCATCCACTTGAAA 59.922 57.895 4.39 0.00 35.56 2.69
716 766 2.166346 TGGGGGCCATCCACTTGAA 61.166 57.895 12.44 0.00 40.47 2.69
717 767 2.534011 TGGGGGCCATCCACTTGA 60.534 61.111 12.44 0.00 40.47 3.02
722 772 3.346734 GGAAGTGGGGGCCATCCA 61.347 66.667 12.44 12.44 33.97 3.41
723 773 4.143301 GGGAAGTGGGGGCCATCC 62.143 72.222 4.39 6.20 35.28 3.51
724 774 1.286305 TTAGGGAAGTGGGGGCCATC 61.286 60.000 4.39 0.00 35.28 3.51
725 775 0.630478 ATTAGGGAAGTGGGGGCCAT 60.630 55.000 4.39 0.00 35.28 4.40
726 776 0.853586 AATTAGGGAAGTGGGGGCCA 60.854 55.000 4.39 0.00 0.00 5.36
727 777 0.106167 GAATTAGGGAAGTGGGGGCC 60.106 60.000 0.00 0.00 0.00 5.80
728 778 0.465642 CGAATTAGGGAAGTGGGGGC 60.466 60.000 0.00 0.00 0.00 5.80
729 779 0.916809 ACGAATTAGGGAAGTGGGGG 59.083 55.000 0.00 0.00 0.00 5.40
730 780 1.134189 GGACGAATTAGGGAAGTGGGG 60.134 57.143 0.00 0.00 0.00 4.96
731 781 1.557832 TGGACGAATTAGGGAAGTGGG 59.442 52.381 0.00 0.00 0.00 4.61
732 782 3.007635 GTTGGACGAATTAGGGAAGTGG 58.992 50.000 0.00 0.00 0.00 4.00
733 783 3.670625 TGTTGGACGAATTAGGGAAGTG 58.329 45.455 0.00 0.00 0.00 3.16
734 784 4.360951 TTGTTGGACGAATTAGGGAAGT 57.639 40.909 0.00 0.00 0.00 3.01
735 785 5.699097 TTTTGTTGGACGAATTAGGGAAG 57.301 39.130 0.00 0.00 0.00 3.46
755 805 5.759763 CCCTACACCTACGTAAACAGTTTTT 59.240 40.000 3.25 0.00 0.00 1.94
756 806 5.163311 ACCCTACACCTACGTAAACAGTTTT 60.163 40.000 3.25 0.00 0.00 2.43
757 807 4.344968 ACCCTACACCTACGTAAACAGTTT 59.655 41.667 3.49 3.49 0.00 2.66
758 808 3.897505 ACCCTACACCTACGTAAACAGTT 59.102 43.478 0.00 0.00 0.00 3.16
759 809 3.500343 ACCCTACACCTACGTAAACAGT 58.500 45.455 0.00 0.00 0.00 3.55
760 810 4.525912 AACCCTACACCTACGTAAACAG 57.474 45.455 0.00 0.00 0.00 3.16
761 811 5.076873 AGTAACCCTACACCTACGTAAACA 58.923 41.667 0.00 0.00 0.00 2.83
762 812 5.393135 GGAGTAACCCTACACCTACGTAAAC 60.393 48.000 0.00 0.00 36.23 2.01
763 813 4.705023 GGAGTAACCCTACACCTACGTAAA 59.295 45.833 0.00 0.00 36.23 2.01
764 814 4.018415 AGGAGTAACCCTACACCTACGTAA 60.018 45.833 0.00 0.00 44.56 3.18
765 815 3.523564 AGGAGTAACCCTACACCTACGTA 59.476 47.826 0.00 0.00 44.56 3.57
766 816 2.310052 AGGAGTAACCCTACACCTACGT 59.690 50.000 0.00 0.00 44.56 3.57
767 817 2.686915 CAGGAGTAACCCTACACCTACG 59.313 54.545 1.63 0.00 44.58 3.51
768 818 3.446516 CACAGGAGTAACCCTACACCTAC 59.553 52.174 1.63 0.00 44.58 3.18
769 819 3.565010 CCACAGGAGTAACCCTACACCTA 60.565 52.174 1.63 0.00 44.58 3.08
770 820 2.537143 CACAGGAGTAACCCTACACCT 58.463 52.381 0.00 0.00 46.57 4.00
771 821 1.553704 CCACAGGAGTAACCCTACACC 59.446 57.143 0.00 0.00 38.64 4.16
772 822 1.066358 GCCACAGGAGTAACCCTACAC 60.066 57.143 0.00 0.00 40.05 2.90
773 823 1.272807 GCCACAGGAGTAACCCTACA 58.727 55.000 0.00 0.00 40.05 2.74
774 824 1.207329 CTGCCACAGGAGTAACCCTAC 59.793 57.143 0.00 0.00 40.05 3.18
775 825 1.078159 TCTGCCACAGGAGTAACCCTA 59.922 52.381 0.00 0.00 40.05 3.53
776 826 0.178903 TCTGCCACAGGAGTAACCCT 60.179 55.000 0.00 0.00 40.05 4.34
777 827 0.250513 CTCTGCCACAGGAGTAACCC 59.749 60.000 0.00 0.00 40.05 4.11
778 828 0.391793 GCTCTGCCACAGGAGTAACC 60.392 60.000 0.00 0.00 39.35 2.85
779 829 0.610687 AGCTCTGCCACAGGAGTAAC 59.389 55.000 0.00 0.00 31.51 2.50
780 830 0.610174 CAGCTCTGCCACAGGAGTAA 59.390 55.000 0.00 0.00 31.51 2.24
781 831 1.260538 CCAGCTCTGCCACAGGAGTA 61.261 60.000 0.00 0.00 31.51 2.59
782 832 2.591072 CCAGCTCTGCCACAGGAGT 61.591 63.158 0.00 0.00 31.51 3.85
783 833 2.268280 CCAGCTCTGCCACAGGAG 59.732 66.667 0.00 0.00 31.51 3.69
784 834 4.025858 GCCAGCTCTGCCACAGGA 62.026 66.667 0.00 0.00 31.51 3.86
840 890 0.250166 TCATGGATGATGGCTGCGAG 60.250 55.000 0.00 0.00 32.26 5.03
868 918 3.124636 CGGTGTTGGCTGTTACTGTATTC 59.875 47.826 0.00 0.00 0.00 1.75
1013 1063 2.500910 AGCAACCAGAGGAGAAGAGATG 59.499 50.000 0.00 0.00 0.00 2.90
1065 1115 4.166888 ATGCCACGGCTCGATGCT 62.167 61.111 9.92 0.00 42.51 3.79
1116 1166 1.945354 GCTCGATCCCCGTGAAGTCA 61.945 60.000 0.00 0.00 39.75 3.41
1170 1220 4.070552 GCGAGGAGGCCGTTGACT 62.071 66.667 0.00 0.00 0.00 3.41
1314 1365 4.436998 CTGCCCGTGTCGAGGACC 62.437 72.222 0.00 0.00 0.00 4.46
1626 1677 2.280797 GAGTTGTCCGTGCTGCCA 60.281 61.111 0.00 0.00 0.00 4.92
1651 1702 2.746375 CCCTTCCCATCCCGACCAG 61.746 68.421 0.00 0.00 0.00 4.00
1689 1740 2.439701 CTGGTGATGCCCAGCTGG 60.440 66.667 26.87 26.87 45.19 4.85
1876 1927 2.586792 GATCGGCAGCAGGGTCTT 59.413 61.111 0.00 0.00 0.00 3.01
2301 2352 0.382158 CCTAGAGCTCGTCGCATTCA 59.618 55.000 8.37 0.00 42.61 2.57
2309 2360 2.145397 TCACCAATCCTAGAGCTCGT 57.855 50.000 8.37 0.00 0.00 4.18
2335 2386 1.405463 CCAGGCTAAAAGGATTTCGGC 59.595 52.381 0.00 0.00 37.28 5.54
2336 2387 2.024414 CCCAGGCTAAAAGGATTTCGG 58.976 52.381 0.00 0.00 37.28 4.30
2337 2388 1.405463 GCCCAGGCTAAAAGGATTTCG 59.595 52.381 0.08 0.00 36.06 3.46
2350 2401 1.900498 GGTGCATATGAGCCCAGGC 60.900 63.158 6.97 0.00 42.33 4.85
2351 2402 0.536687 CAGGTGCATATGAGCCCAGG 60.537 60.000 6.97 0.00 0.00 4.45
2352 2403 0.182061 ACAGGTGCATATGAGCCCAG 59.818 55.000 6.97 5.83 0.00 4.45
2353 2404 0.107066 CACAGGTGCATATGAGCCCA 60.107 55.000 6.97 0.00 0.00 5.36
2354 2405 0.107017 ACACAGGTGCATATGAGCCC 60.107 55.000 6.97 2.24 0.00 5.19
2355 2406 1.755179 AACACAGGTGCATATGAGCC 58.245 50.000 6.97 7.37 0.00 4.70
2356 2407 3.855689 AAAACACAGGTGCATATGAGC 57.144 42.857 6.97 1.70 0.00 4.26
2408 2459 3.254166 TCGCGATTGTAACCCTATACCTC 59.746 47.826 3.71 0.00 0.00 3.85
2480 2532 1.280982 TAGTCGTACAGAGCGTACCG 58.719 55.000 0.00 0.00 46.67 4.02
2523 2576 5.836821 AGATTAGTCGTGTGCAGAATAGA 57.163 39.130 0.00 0.00 0.00 1.98
2645 2699 1.602605 TCGGACTCTTCTGTCGCCA 60.603 57.895 0.00 0.00 37.81 5.69
2769 2823 4.816925 GGGAGCGTTATCTTTTCAGCTTAT 59.183 41.667 0.00 0.00 34.85 1.73
2891 2946 2.237392 GAGGCTAGAGTTCAACCATGGT 59.763 50.000 13.00 13.00 0.00 3.55
2964 3020 3.254892 GAGGTTTTCGACAGAGGACATC 58.745 50.000 0.00 0.00 0.00 3.06
2967 3023 1.619332 AGGAGGTTTTCGACAGAGGAC 59.381 52.381 0.00 0.00 0.00 3.85
3129 3187 6.782150 ACTAAACTTGCTAACAAACTGTGAC 58.218 36.000 0.00 0.00 34.74 3.67
3209 3267 1.873903 CGGTATGGCGAGAAATGAGGG 60.874 57.143 0.00 0.00 0.00 4.30



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.