Multiple sequence alignment - TraesCS2B01G243200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G243200 chr2B 100.000 3062 0 0 1 3062 247516948 247520009 0.000000e+00 5655.0
1 TraesCS2B01G243200 chr2B 95.177 311 15 0 2371 2681 96383157 96383467 2.740000e-135 492.0
2 TraesCS2B01G243200 chr2B 84.615 130 14 5 2709 2833 53517608 53517480 1.150000e-24 124.0
3 TraesCS2B01G243200 chr2A 93.610 1737 92 13 632 2350 204929744 204931479 0.000000e+00 2575.0
4 TraesCS2B01G243200 chr2A 92.895 380 14 3 3 375 204929373 204929746 9.660000e-150 540.0
5 TraesCS2B01G243200 chr2A 95.860 314 11 2 2365 2677 589799381 589799693 9.800000e-140 507.0
6 TraesCS2B01G243200 chr2A 85.788 387 31 8 2678 3062 204931515 204931879 3.700000e-104 388.0
7 TraesCS2B01G243200 chr2A 79.339 121 16 7 1011 1126 204993376 204993492 3.270000e-10 76.8
8 TraesCS2B01G243200 chr2D 95.152 1609 68 5 634 2234 190369533 190371139 0.000000e+00 2531.0
9 TraesCS2B01G243200 chr2D 96.296 351 12 1 1 350 190369164 190369514 2.650000e-160 575.0
10 TraesCS2B01G243200 chr2D 92.248 387 27 3 2678 3062 190433793 190434178 2.080000e-151 545.0
11 TraesCS2B01G243200 chr2D 96.743 307 10 0 2371 2677 76640437 76640743 2.110000e-141 512.0
12 TraesCS2B01G243200 chr2D 92.623 122 8 1 2230 2350 190433636 190433757 1.130000e-39 174.0
13 TraesCS2B01G243200 chr2D 85.714 119 12 4 2713 2827 32600027 32600144 1.490000e-23 121.0
14 TraesCS2B01G243200 chr2D 79.167 120 17 6 1011 1126 190437363 190437478 3.270000e-10 76.8
15 TraesCS2B01G243200 chr7B 97.720 307 7 0 2371 2677 631135902 631135596 2.090000e-146 529.0
16 TraesCS2B01G243200 chr7B 95.785 261 11 0 373 633 464539952 464539692 3.650000e-114 422.0
17 TraesCS2B01G243200 chr7B 95.472 265 11 1 373 637 713286447 713286184 3.650000e-114 422.0
18 TraesCS2B01G243200 chr3D 96.805 313 10 0 2369 2681 20892902 20893214 9.730000e-145 523.0
19 TraesCS2B01G243200 chr6D 96.795 312 10 0 2369 2680 337600241 337599930 3.500000e-144 521.0
20 TraesCS2B01G243200 chr1D 96.785 311 10 0 2369 2679 313817029 313817339 1.260000e-143 520.0
21 TraesCS2B01G243200 chr1D 95.625 320 13 1 2371 2690 361354957 361354639 2.110000e-141 512.0
22 TraesCS2B01G243200 chr7D 96.463 311 11 0 2371 2681 444357230 444356920 5.850000e-142 514.0
23 TraesCS2B01G243200 chr7D 96.141 311 11 1 2369 2679 565664462 565664771 9.800000e-140 507.0
24 TraesCS2B01G243200 chr7D 95.420 262 12 0 373 634 209183667 209183928 4.720000e-113 418.0
25 TraesCS2B01G243200 chr6A 96.154 312 12 0 2369 2680 408052902 408053213 7.570000e-141 510.0
26 TraesCS2B01G243200 chr6A 78.829 222 32 12 2702 2918 97608269 97608480 5.330000e-28 135.0
27 TraesCS2B01G243200 chr3B 95.192 312 15 0 2368 2679 225301743 225302054 7.630000e-136 494.0
28 TraesCS2B01G243200 chr3B 95.455 264 12 0 370 633 464610476 464610213 3.650000e-114 422.0
29 TraesCS2B01G243200 chr6B 95.802 262 11 0 372 633 583188972 583189233 1.010000e-114 424.0
30 TraesCS2B01G243200 chr6B 95.455 264 12 0 373 636 550778182 550777919 3.650000e-114 422.0
31 TraesCS2B01G243200 chr6B 94.096 271 16 0 370 640 45259124 45259394 2.200000e-111 412.0
32 TraesCS2B01G243200 chr6B 87.736 106 11 2 2701 2805 155201168 155201272 4.150000e-24 122.0
33 TraesCS2B01G243200 chr1B 94.834 271 13 1 370 640 576853747 576854016 3.650000e-114 422.0
34 TraesCS2B01G243200 chr1B 95.094 265 13 0 370 634 154599313 154599577 4.720000e-113 418.0
35 TraesCS2B01G243200 chrUn 74.481 337 63 17 2701 3029 368039523 368039202 1.150000e-24 124.0
36 TraesCS2B01G243200 chrUn 87.273 110 9 4 2722 2827 285394024 285393916 1.490000e-23 121.0
37 TraesCS2B01G243200 chr3A 86.792 106 13 1 2697 2802 724523985 724523881 1.930000e-22 117.0
38 TraesCS2B01G243200 chr5B 85.577 104 12 3 989 1090 411621830 411621932 4.180000e-19 106.0
39 TraesCS2B01G243200 chr5B 85.333 75 9 2 1012 1085 635808601 635808528 3.270000e-10 76.8
40 TraesCS2B01G243200 chr5B 80.247 81 13 3 2747 2827 11309293 11309370 1.190000e-04 58.4
41 TraesCS2B01G243200 chr5D 84.615 104 13 3 989 1090 350676185 350676287 1.940000e-17 100.0
42 TraesCS2B01G243200 chr5D 85.333 75 9 2 1012 1085 505818469 505818396 3.270000e-10 76.8
43 TraesCS2B01G243200 chr5A 84.615 104 13 3 989 1090 451138355 451138457 1.940000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G243200 chr2B 247516948 247520009 3061 False 5655.000000 5655 100.000000 1 3062 1 chr2B.!!$F2 3061
1 TraesCS2B01G243200 chr2A 204929373 204931879 2506 False 1167.666667 2575 90.764333 3 3062 3 chr2A.!!$F3 3059
2 TraesCS2B01G243200 chr2D 190369164 190371139 1975 False 1553.000000 2531 95.724000 1 2234 2 chr2D.!!$F3 2233
3 TraesCS2B01G243200 chr2D 190433636 190437478 3842 False 265.266667 545 88.012667 1011 3062 3 chr2D.!!$F4 2051

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
54 61 0.109226 ACGCGGTTCTCTCTTAGCAC 60.109 55.0 12.47 0.0 0.0 4.40 F
386 394 1.020437 CGTACTACTCCCTCCGTTCC 58.980 60.0 0.00 0.0 0.0 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1460 1477 1.003580 TGCTGTTGGAGTCCTGGAATC 59.996 52.381 15.49 15.49 0.00 2.52 R
2368 2410 0.250989 CCGAACCAAACAGGGCCTTA 60.251 55.000 1.32 0.00 43.89 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 59 0.992802 CAACGCGGTTCTCTCTTAGC 59.007 55.000 12.47 0.00 0.00 3.09
54 61 0.109226 ACGCGGTTCTCTCTTAGCAC 60.109 55.000 12.47 0.00 0.00 4.40
119 126 2.019951 GACGGCTTTGACGAGCGAA 61.020 57.895 0.00 0.00 43.62 4.70
152 159 1.214062 GACCACGAGTCTCAGCCAG 59.786 63.158 0.00 0.00 42.69 4.85
180 187 6.928520 AGGAGGCAAGTTTGAATTCTTATTG 58.071 36.000 7.05 7.73 0.00 1.90
334 342 2.267426 GCAACACACCAAAAAGACCAC 58.733 47.619 0.00 0.00 0.00 4.16
372 380 3.022607 GTGCTTGACCAAGTACGTACT 57.977 47.619 22.45 22.45 42.42 2.73
373 381 4.164822 GTGCTTGACCAAGTACGTACTA 57.835 45.455 27.59 9.81 42.42 1.82
374 382 3.916776 GTGCTTGACCAAGTACGTACTAC 59.083 47.826 27.59 18.36 42.42 2.73
375 383 3.822735 TGCTTGACCAAGTACGTACTACT 59.177 43.478 27.59 11.34 40.45 2.57
376 384 4.083110 TGCTTGACCAAGTACGTACTACTC 60.083 45.833 27.59 20.35 40.45 2.59
377 385 4.673841 GCTTGACCAAGTACGTACTACTCC 60.674 50.000 27.59 17.12 40.45 3.85
378 386 3.347216 TGACCAAGTACGTACTACTCCC 58.653 50.000 27.59 15.87 34.26 4.30
379 387 3.009473 TGACCAAGTACGTACTACTCCCT 59.991 47.826 27.59 9.05 34.26 4.20
380 388 3.615155 ACCAAGTACGTACTACTCCCTC 58.385 50.000 27.59 0.00 34.26 4.30
381 389 2.948315 CCAAGTACGTACTACTCCCTCC 59.052 54.545 27.59 0.00 34.26 4.30
382 390 2.611225 AGTACGTACTACTCCCTCCG 57.389 55.000 26.36 0.00 34.13 4.63
383 391 1.834263 AGTACGTACTACTCCCTCCGT 59.166 52.381 26.36 0.00 34.13 4.69
384 392 2.237392 AGTACGTACTACTCCCTCCGTT 59.763 50.000 26.36 0.00 34.13 4.44
385 393 1.743996 ACGTACTACTCCCTCCGTTC 58.256 55.000 0.00 0.00 0.00 3.95
386 394 1.020437 CGTACTACTCCCTCCGTTCC 58.980 60.000 0.00 0.00 0.00 3.62
387 395 1.679944 CGTACTACTCCCTCCGTTCCA 60.680 57.143 0.00 0.00 0.00 3.53
388 396 2.664015 GTACTACTCCCTCCGTTCCAT 58.336 52.381 0.00 0.00 0.00 3.41
389 397 3.745480 CGTACTACTCCCTCCGTTCCATA 60.745 52.174 0.00 0.00 0.00 2.74
390 398 3.393426 ACTACTCCCTCCGTTCCATAA 57.607 47.619 0.00 0.00 0.00 1.90
391 399 3.924922 ACTACTCCCTCCGTTCCATAAT 58.075 45.455 0.00 0.00 0.00 1.28
392 400 3.641906 ACTACTCCCTCCGTTCCATAATG 59.358 47.826 0.00 0.00 0.00 1.90
393 401 2.478292 ACTCCCTCCGTTCCATAATGT 58.522 47.619 0.00 0.00 0.00 2.71
394 402 3.649843 ACTCCCTCCGTTCCATAATGTA 58.350 45.455 0.00 0.00 0.00 2.29
395 403 4.035112 ACTCCCTCCGTTCCATAATGTAA 58.965 43.478 0.00 0.00 0.00 2.41
396 404 4.658901 ACTCCCTCCGTTCCATAATGTAAT 59.341 41.667 0.00 0.00 0.00 1.89
397 405 4.968259 TCCCTCCGTTCCATAATGTAATG 58.032 43.478 0.00 0.00 0.00 1.90
398 406 3.502211 CCCTCCGTTCCATAATGTAATGC 59.498 47.826 0.00 0.00 0.00 3.56
399 407 3.502211 CCTCCGTTCCATAATGTAATGCC 59.498 47.826 0.00 0.00 0.00 4.40
400 408 4.389374 CTCCGTTCCATAATGTAATGCCT 58.611 43.478 0.00 0.00 0.00 4.75
401 409 5.512404 CCTCCGTTCCATAATGTAATGCCTA 60.512 44.000 0.00 0.00 0.00 3.93
402 410 6.121776 TCCGTTCCATAATGTAATGCCTAT 57.878 37.500 0.00 0.00 0.00 2.57
403 411 7.247456 TCCGTTCCATAATGTAATGCCTATA 57.753 36.000 0.00 0.00 0.00 1.31
404 412 7.327975 TCCGTTCCATAATGTAATGCCTATAG 58.672 38.462 0.00 0.00 0.00 1.31
405 413 7.179516 TCCGTTCCATAATGTAATGCCTATAGA 59.820 37.037 0.00 0.00 0.00 1.98
406 414 7.987458 CCGTTCCATAATGTAATGCCTATAGAT 59.013 37.037 0.00 0.00 0.00 1.98
407 415 9.383519 CGTTCCATAATGTAATGCCTATAGATT 57.616 33.333 0.00 0.00 0.00 2.40
437 445 9.482627 ACAAAAGTCAAACATTACAAACTTTGA 57.517 25.926 8.55 0.00 37.12 2.69
440 448 9.868277 AAAGTCAAACATTACAAACTTTGATCA 57.132 25.926 8.55 0.00 36.06 2.92
442 450 9.467258 AGTCAAACATTACAAACTTTGATCATG 57.533 29.630 8.55 8.92 35.61 3.07
443 451 9.248291 GTCAAACATTACAAACTTTGATCATGT 57.752 29.630 8.55 9.45 35.61 3.21
444 452 9.814899 TCAAACATTACAAACTTTGATCATGTT 57.185 25.926 8.55 13.78 38.47 2.71
481 489 9.338622 AGTAGGTACATCTAAAATACCAAATGC 57.661 33.333 0.00 0.00 40.81 3.56
482 490 9.116067 GTAGGTACATCTAAAATACCAAATGCA 57.884 33.333 0.00 0.00 40.81 3.96
483 491 7.996385 AGGTACATCTAAAATACCAAATGCAC 58.004 34.615 0.00 0.00 40.81 4.57
484 492 7.613801 AGGTACATCTAAAATACCAAATGCACA 59.386 33.333 0.00 0.00 40.81 4.57
485 493 8.413229 GGTACATCTAAAATACCAAATGCACAT 58.587 33.333 0.00 0.00 38.61 3.21
486 494 9.450807 GTACATCTAAAATACCAAATGCACATC 57.549 33.333 0.00 0.00 0.00 3.06
487 495 8.065473 ACATCTAAAATACCAAATGCACATCA 57.935 30.769 0.00 0.00 0.00 3.07
488 496 8.698210 ACATCTAAAATACCAAATGCACATCAT 58.302 29.630 0.00 0.00 36.87 2.45
489 497 9.537192 CATCTAAAATACCAAATGCACATCATT 57.463 29.630 0.00 0.00 46.82 2.57
490 498 8.929827 TCTAAAATACCAAATGCACATCATTG 57.070 30.769 0.00 0.00 44.23 2.82
491 499 6.988622 AAAATACCAAATGCACATCATTGG 57.011 33.333 11.02 11.02 44.23 3.16
492 500 5.936187 AATACCAAATGCACATCATTGGA 57.064 34.783 17.12 5.42 44.23 3.53
493 501 6.488769 AATACCAAATGCACATCATTGGAT 57.511 33.333 17.12 6.97 44.23 3.41
494 502 7.600231 AATACCAAATGCACATCATTGGATA 57.400 32.000 17.12 8.79 44.23 2.59
495 503 5.266733 ACCAAATGCACATCATTGGATAC 57.733 39.130 17.12 0.00 44.23 2.24
515 523 9.476202 TGGATACATCGTGAGTAATATTTTCAG 57.524 33.333 0.00 0.00 46.17 3.02
516 524 9.692749 GGATACATCGTGAGTAATATTTTCAGA 57.307 33.333 0.00 0.19 0.00 3.27
520 528 9.383519 ACATCGTGAGTAATATTTTCAGAATGT 57.616 29.630 15.40 15.40 37.40 2.71
523 531 9.863845 TCGTGAGTAATATTTTCAGAATGTACA 57.136 29.630 0.00 0.00 37.40 2.90
535 543 9.689976 TTTTCAGAATGTACATGTTTGGTATTG 57.310 29.630 9.63 0.00 37.40 1.90
536 544 7.994425 TCAGAATGTACATGTTTGGTATTGT 57.006 32.000 9.63 0.00 37.40 2.71
537 545 9.508642 TTCAGAATGTACATGTTTGGTATTGTA 57.491 29.630 9.63 0.00 37.40 2.41
538 546 9.161629 TCAGAATGTACATGTTTGGTATTGTAG 57.838 33.333 9.63 0.00 37.40 2.74
539 547 9.161629 CAGAATGTACATGTTTGGTATTGTAGA 57.838 33.333 9.63 0.00 0.00 2.59
540 548 9.905713 AGAATGTACATGTTTGGTATTGTAGAT 57.094 29.630 9.63 0.00 31.99 1.98
541 549 9.935682 GAATGTACATGTTTGGTATTGTAGATG 57.064 33.333 9.63 0.00 31.34 2.90
542 550 9.461312 AATGTACATGTTTGGTATTGTAGATGT 57.539 29.630 9.63 0.00 31.34 3.06
582 590 3.525268 CTTGGTCAAAGTTGGCAAAGT 57.475 42.857 0.00 0.00 38.66 2.66
583 591 3.860641 CTTGGTCAAAGTTGGCAAAGTT 58.139 40.909 0.00 0.00 38.66 2.66
584 592 3.971245 TGGTCAAAGTTGGCAAAGTTT 57.029 38.095 0.00 0.42 39.10 2.66
593 601 6.961359 AAGTTGGCAAAGTTTGACTTTTAC 57.039 33.333 21.83 13.77 45.38 2.01
594 602 6.031751 AGTTGGCAAAGTTTGACTTTTACA 57.968 33.333 21.83 0.00 45.38 2.41
595 603 6.459923 AGTTGGCAAAGTTTGACTTTTACAA 58.540 32.000 21.83 4.37 45.38 2.41
596 604 6.931840 AGTTGGCAAAGTTTGACTTTTACAAA 59.068 30.769 21.83 3.66 45.38 2.83
597 605 7.442666 AGTTGGCAAAGTTTGACTTTTACAAAA 59.557 29.630 21.83 2.93 45.38 2.44
598 606 7.730364 TGGCAAAGTTTGACTTTTACAAAAA 57.270 28.000 21.83 0.00 45.38 1.94
599 607 8.329203 TGGCAAAGTTTGACTTTTACAAAAAT 57.671 26.923 21.83 0.00 45.38 1.82
600 608 8.447053 TGGCAAAGTTTGACTTTTACAAAAATC 58.553 29.630 21.83 0.00 45.38 2.17
601 609 8.664798 GGCAAAGTTTGACTTTTACAAAAATCT 58.335 29.630 19.82 0.00 45.38 2.40
610 618 9.515226 TGACTTTTACAAAAATCTATAGGCACT 57.485 29.630 0.00 0.00 46.37 4.40
624 632 2.726821 AGGCACTACATTGTGGAATGG 58.273 47.619 7.20 0.00 43.00 3.16
625 633 2.308570 AGGCACTACATTGTGGAATGGA 59.691 45.455 7.20 0.00 43.00 3.41
629 637 3.931907 CTACATTGTGGAATGGAGGGA 57.068 47.619 0.00 0.00 44.23 4.20
630 638 2.814805 ACATTGTGGAATGGAGGGAG 57.185 50.000 0.00 0.00 43.00 4.30
677 685 2.219458 CATGCACATCACAGGATCTCC 58.781 52.381 0.00 0.00 0.00 3.71
749 759 1.071107 CGATCGTCTAGCTCGAGACAC 60.071 57.143 18.75 5.05 45.23 3.67
817 827 4.496336 GCTCGGGCCTCCAATGCT 62.496 66.667 0.84 0.00 0.00 3.79
888 898 1.299850 CCACAGAGTTCGTGCGTGA 60.300 57.895 0.00 0.00 32.85 4.35
1131 1148 2.434331 GGGCAGCTGTACAACCCA 59.566 61.111 18.51 0.00 40.52 4.51
1134 1151 1.032114 GGCAGCTGTACAACCCATCC 61.032 60.000 16.64 0.00 0.00 3.51
1146 1163 2.273449 CCATCCAGCTCCACCACC 59.727 66.667 0.00 0.00 0.00 4.61
1173 1190 2.045536 CTCCCCTGCAACAGCTCC 60.046 66.667 0.00 0.00 0.00 4.70
1251 1268 1.300311 CAACCAGACGTACGGCACA 60.300 57.895 25.52 0.00 0.00 4.57
1460 1477 2.523184 TTCTCGTACTGCCTCACGCG 62.523 60.000 3.53 3.53 42.08 6.01
1471 1488 1.513158 CTCACGCGATTCCAGGACT 59.487 57.895 15.93 0.00 0.00 3.85
1497 1514 3.753434 ACGAGCACGCTCCTCCTG 61.753 66.667 13.24 1.74 43.96 3.86
1530 1547 4.636435 CTCAACGGCACCGGGGTT 62.636 66.667 14.51 0.54 44.69 4.11
1918 1935 2.481441 ACTACATGATCTTGGGCTCCA 58.519 47.619 12.76 0.00 0.00 3.86
1950 1967 1.675641 GGCAATGCGGAACCAGACT 60.676 57.895 0.00 0.00 0.00 3.24
2072 2089 2.031682 GCACGCTCTGAAGACAAATGTT 60.032 45.455 0.00 0.00 0.00 2.71
2074 2091 3.496130 CACGCTCTGAAGACAAATGTTCT 59.504 43.478 0.00 0.00 0.00 3.01
2080 2097 9.249457 CGCTCTGAAGACAAATGTTCTAATATA 57.751 33.333 0.00 0.00 0.00 0.86
2099 2116 7.677454 AATATATGTGTACATGCATGTCTGG 57.323 36.000 34.54 7.57 41.97 3.86
2104 2121 1.672881 GTACATGCATGTCTGGCTTCC 59.327 52.381 34.54 10.47 41.97 3.46
2203 2223 4.116747 TGCTTAACATTTATTTGCGGGG 57.883 40.909 0.00 0.00 0.00 5.73
2236 2260 2.007049 GCCCGCCCGACATAGATATTG 61.007 57.143 0.00 0.00 0.00 1.90
2260 2284 1.406614 CCACTCACCTTCATGCCTCTC 60.407 57.143 0.00 0.00 0.00 3.20
2262 2286 2.093075 CACTCACCTTCATGCCTCTCAT 60.093 50.000 0.00 0.00 35.31 2.90
2277 2301 7.004555 TGCCTCTCATAAAACAGAACTAGAA 57.995 36.000 0.00 0.00 0.00 2.10
2284 2308 9.346725 CTCATAAAACAGAACTAGAAAAATGGC 57.653 33.333 0.00 0.00 0.00 4.40
2375 2417 9.529325 GAAAATTTCAGTAAACATATAAGGCCC 57.471 33.333 0.00 0.00 0.00 5.80
2376 2418 8.838649 AAATTTCAGTAAACATATAAGGCCCT 57.161 30.769 0.00 0.00 0.00 5.19
2377 2419 7.823745 ATTTCAGTAAACATATAAGGCCCTG 57.176 36.000 0.00 0.00 0.00 4.45
2378 2420 5.968676 TCAGTAAACATATAAGGCCCTGT 57.031 39.130 0.00 0.00 0.00 4.00
2379 2421 6.321821 TCAGTAAACATATAAGGCCCTGTT 57.678 37.500 0.00 0.00 33.45 3.16
2380 2422 6.727394 TCAGTAAACATATAAGGCCCTGTTT 58.273 36.000 16.91 16.91 42.61 2.83
2381 2423 6.601613 TCAGTAAACATATAAGGCCCTGTTTG 59.398 38.462 19.77 7.38 40.81 2.93
2382 2424 5.891551 AGTAAACATATAAGGCCCTGTTTGG 59.108 40.000 19.77 2.38 40.81 3.28
2383 2425 4.331159 AACATATAAGGCCCTGTTTGGT 57.669 40.909 0.00 0.00 0.00 3.67
2384 2426 4.331159 ACATATAAGGCCCTGTTTGGTT 57.669 40.909 0.00 0.00 0.00 3.67
2385 2427 4.278310 ACATATAAGGCCCTGTTTGGTTC 58.722 43.478 0.00 0.00 0.00 3.62
2386 2428 1.834188 ATAAGGCCCTGTTTGGTTCG 58.166 50.000 0.00 0.00 0.00 3.95
2387 2429 0.250989 TAAGGCCCTGTTTGGTTCGG 60.251 55.000 0.00 0.00 0.00 4.30
2388 2430 3.680786 GGCCCTGTTTGGTTCGGC 61.681 66.667 0.00 0.00 38.96 5.54
2389 2431 2.597510 GCCCTGTTTGGTTCGGCT 60.598 61.111 0.00 0.00 36.65 5.52
2390 2432 1.302993 GCCCTGTTTGGTTCGGCTA 60.303 57.895 0.00 0.00 36.65 3.93
2391 2433 0.679960 GCCCTGTTTGGTTCGGCTAT 60.680 55.000 0.00 0.00 36.65 2.97
2392 2434 1.094785 CCCTGTTTGGTTCGGCTATG 58.905 55.000 0.00 0.00 0.00 2.23
2393 2435 1.094785 CCTGTTTGGTTCGGCTATGG 58.905 55.000 0.00 0.00 0.00 2.74
2394 2436 1.339631 CCTGTTTGGTTCGGCTATGGA 60.340 52.381 0.00 0.00 0.00 3.41
2395 2437 2.643551 CTGTTTGGTTCGGCTATGGAT 58.356 47.619 0.00 0.00 0.00 3.41
2396 2438 3.016736 CTGTTTGGTTCGGCTATGGATT 58.983 45.455 0.00 0.00 0.00 3.01
2397 2439 3.426615 TGTTTGGTTCGGCTATGGATTT 58.573 40.909 0.00 0.00 0.00 2.17
2398 2440 3.442273 TGTTTGGTTCGGCTATGGATTTC 59.558 43.478 0.00 0.00 0.00 2.17
2399 2441 3.644966 TTGGTTCGGCTATGGATTTCT 57.355 42.857 0.00 0.00 0.00 2.52
2400 2442 4.764050 TTGGTTCGGCTATGGATTTCTA 57.236 40.909 0.00 0.00 0.00 2.10
2401 2443 4.764050 TGGTTCGGCTATGGATTTCTAA 57.236 40.909 0.00 0.00 0.00 2.10
2402 2444 5.105567 TGGTTCGGCTATGGATTTCTAAA 57.894 39.130 0.00 0.00 0.00 1.85
2403 2445 5.502079 TGGTTCGGCTATGGATTTCTAAAA 58.498 37.500 0.00 0.00 0.00 1.52
2404 2446 5.588648 TGGTTCGGCTATGGATTTCTAAAAG 59.411 40.000 0.00 0.00 0.00 2.27
2405 2447 5.505819 GGTTCGGCTATGGATTTCTAAAAGC 60.506 44.000 0.00 0.00 0.00 3.51
2406 2448 4.776349 TCGGCTATGGATTTCTAAAAGCA 58.224 39.130 0.00 0.00 0.00 3.91
2407 2449 4.816385 TCGGCTATGGATTTCTAAAAGCAG 59.184 41.667 0.00 0.00 0.00 4.24
2408 2450 4.555511 CGGCTATGGATTTCTAAAAGCAGC 60.556 45.833 0.00 0.00 0.00 5.25
2409 2451 4.582240 GGCTATGGATTTCTAAAAGCAGCT 59.418 41.667 0.00 0.00 0.00 4.24
2410 2452 5.506982 GGCTATGGATTTCTAAAAGCAGCTG 60.507 44.000 10.11 10.11 0.00 4.24
2411 2453 5.067023 GCTATGGATTTCTAAAAGCAGCTGT 59.933 40.000 16.64 0.00 0.00 4.40
2412 2454 4.771590 TGGATTTCTAAAAGCAGCTGTG 57.228 40.909 16.64 0.00 0.00 3.66
2413 2455 4.397420 TGGATTTCTAAAAGCAGCTGTGA 58.603 39.130 16.64 1.92 0.00 3.58
2414 2456 4.826733 TGGATTTCTAAAAGCAGCTGTGAA 59.173 37.500 16.64 7.75 0.00 3.18
2415 2457 5.301551 TGGATTTCTAAAAGCAGCTGTGAAA 59.698 36.000 16.64 15.06 0.00 2.69
2416 2458 6.183360 TGGATTTCTAAAAGCAGCTGTGAAAA 60.183 34.615 16.64 7.20 0.00 2.29
2417 2459 6.701400 GGATTTCTAAAAGCAGCTGTGAAAAA 59.299 34.615 16.64 7.71 0.00 1.94
2418 2460 7.386025 GGATTTCTAAAAGCAGCTGTGAAAAAT 59.614 33.333 16.64 11.76 0.00 1.82
2419 2461 7.698836 TTTCTAAAAGCAGCTGTGAAAAATC 57.301 32.000 16.64 0.00 0.00 2.17
2420 2462 6.639632 TCTAAAAGCAGCTGTGAAAAATCT 57.360 33.333 16.64 0.00 0.00 2.40
2421 2463 6.441274 TCTAAAAGCAGCTGTGAAAAATCTG 58.559 36.000 16.64 0.00 0.00 2.90
2423 2465 2.719426 GCAGCTGTGAAAAATCTGCT 57.281 45.000 16.64 0.00 44.71 4.24
2425 2467 3.637998 CAGCTGTGAAAAATCTGCTGT 57.362 42.857 5.25 0.00 45.07 4.40
2426 2468 3.305964 CAGCTGTGAAAAATCTGCTGTG 58.694 45.455 5.25 0.00 45.07 3.66
2427 2469 2.295349 AGCTGTGAAAAATCTGCTGTGG 59.705 45.455 0.00 0.00 37.44 4.17
2428 2470 2.294233 GCTGTGAAAAATCTGCTGTGGA 59.706 45.455 0.00 0.00 0.00 4.02
2429 2471 3.243501 GCTGTGAAAAATCTGCTGTGGAA 60.244 43.478 0.00 0.00 0.00 3.53
2430 2472 4.737352 GCTGTGAAAAATCTGCTGTGGAAA 60.737 41.667 0.00 0.00 0.00 3.13
2431 2473 5.336150 TGTGAAAAATCTGCTGTGGAAAA 57.664 34.783 0.00 0.00 0.00 2.29
2432 2474 5.728471 TGTGAAAAATCTGCTGTGGAAAAA 58.272 33.333 0.00 0.00 0.00 1.94
2433 2475 5.580297 TGTGAAAAATCTGCTGTGGAAAAAC 59.420 36.000 0.00 0.00 0.00 2.43
2434 2476 5.580297 GTGAAAAATCTGCTGTGGAAAAACA 59.420 36.000 0.00 0.00 0.00 2.83
2443 2485 4.448537 CTGTGGAAAAACAGTTGTGGAA 57.551 40.909 0.00 0.00 42.21 3.53
2444 2486 4.815269 CTGTGGAAAAACAGTTGTGGAAA 58.185 39.130 0.00 0.00 42.21 3.13
2445 2487 5.215252 TGTGGAAAAACAGTTGTGGAAAA 57.785 34.783 0.00 0.00 0.00 2.29
2446 2488 5.799213 TGTGGAAAAACAGTTGTGGAAAAT 58.201 33.333 0.00 0.00 0.00 1.82
2447 2489 5.872070 TGTGGAAAAACAGTTGTGGAAAATC 59.128 36.000 0.00 0.00 0.00 2.17
2448 2490 6.106003 GTGGAAAAACAGTTGTGGAAAATCT 58.894 36.000 0.00 0.00 0.00 2.40
2449 2491 6.035975 GTGGAAAAACAGTTGTGGAAAATCTG 59.964 38.462 0.00 0.00 0.00 2.90
2450 2492 6.071108 TGGAAAAACAGTTGTGGAAAATCTGA 60.071 34.615 0.00 0.00 0.00 3.27
2451 2493 6.986231 GGAAAAACAGTTGTGGAAAATCTGAT 59.014 34.615 0.00 0.00 0.00 2.90
2452 2494 7.495606 GGAAAAACAGTTGTGGAAAATCTGATT 59.504 33.333 0.00 0.00 0.00 2.57
2453 2495 8.791327 AAAAACAGTTGTGGAAAATCTGATTT 57.209 26.923 9.76 9.76 34.41 2.17
2454 2496 7.775397 AAACAGTTGTGGAAAATCTGATTTG 57.225 32.000 15.80 4.23 31.77 2.32
2455 2497 6.713762 ACAGTTGTGGAAAATCTGATTTGA 57.286 33.333 15.80 1.69 31.77 2.69
2456 2498 7.111247 ACAGTTGTGGAAAATCTGATTTGAA 57.889 32.000 15.80 3.02 31.77 2.69
2457 2499 7.555087 ACAGTTGTGGAAAATCTGATTTGAAA 58.445 30.769 15.80 2.69 31.77 2.69
2458 2500 8.040132 ACAGTTGTGGAAAATCTGATTTGAAAA 58.960 29.630 15.80 3.21 31.77 2.29
2459 2501 8.881743 CAGTTGTGGAAAATCTGATTTGAAAAA 58.118 29.630 15.80 4.43 31.77 1.94
2460 2502 9.101655 AGTTGTGGAAAATCTGATTTGAAAAAG 57.898 29.630 15.80 0.00 31.77 2.27
2461 2503 9.097257 GTTGTGGAAAATCTGATTTGAAAAAGA 57.903 29.630 15.80 0.00 31.77 2.52
2462 2504 9.835389 TTGTGGAAAATCTGATTTGAAAAAGAT 57.165 25.926 15.80 0.00 31.77 2.40
2476 2518 9.822185 ATTTGAAAAAGATATAGGTCATTTGGC 57.178 29.630 0.00 0.00 0.00 4.52
2477 2519 7.953005 TGAAAAAGATATAGGTCATTTGGCA 57.047 32.000 0.00 0.00 0.00 4.92
2478 2520 8.359875 TGAAAAAGATATAGGTCATTTGGCAA 57.640 30.769 0.00 0.00 0.00 4.52
2479 2521 8.811017 TGAAAAAGATATAGGTCATTTGGCAAA 58.189 29.630 16.01 16.01 0.00 3.68
2480 2522 9.087424 GAAAAAGATATAGGTCATTTGGCAAAC 57.913 33.333 16.00 3.12 0.00 2.93
2481 2523 6.715347 AAGATATAGGTCATTTGGCAAACC 57.285 37.500 16.00 13.12 0.00 3.27
2492 2534 2.284754 TGGCAAACCAGCTGATACAA 57.715 45.000 17.39 0.00 42.67 2.41
2493 2535 1.885887 TGGCAAACCAGCTGATACAAC 59.114 47.619 17.39 1.73 42.67 3.32
2494 2536 2.162681 GGCAAACCAGCTGATACAACT 58.837 47.619 17.39 0.00 35.26 3.16
2495 2537 2.558359 GGCAAACCAGCTGATACAACTT 59.442 45.455 17.39 0.00 35.26 2.66
2496 2538 3.005791 GGCAAACCAGCTGATACAACTTT 59.994 43.478 17.39 0.00 35.26 2.66
2497 2539 4.501400 GGCAAACCAGCTGATACAACTTTT 60.501 41.667 17.39 0.00 35.26 2.27
2498 2540 5.049828 GCAAACCAGCTGATACAACTTTTT 58.950 37.500 17.39 0.00 0.00 1.94
2499 2541 5.175673 GCAAACCAGCTGATACAACTTTTTC 59.824 40.000 17.39 0.00 0.00 2.29
2500 2542 6.272318 CAAACCAGCTGATACAACTTTTTCA 58.728 36.000 17.39 0.00 0.00 2.69
2501 2543 5.695851 ACCAGCTGATACAACTTTTTCAG 57.304 39.130 17.39 0.00 38.86 3.02
2502 2544 5.376625 ACCAGCTGATACAACTTTTTCAGA 58.623 37.500 17.39 0.00 38.25 3.27
2503 2545 6.006449 ACCAGCTGATACAACTTTTTCAGAT 58.994 36.000 17.39 0.00 38.25 2.90
2504 2546 6.491403 ACCAGCTGATACAACTTTTTCAGATT 59.509 34.615 17.39 0.00 38.25 2.40
2505 2547 7.014615 ACCAGCTGATACAACTTTTTCAGATTT 59.985 33.333 17.39 0.00 38.25 2.17
2506 2548 7.869429 CCAGCTGATACAACTTTTTCAGATTTT 59.131 33.333 17.39 0.00 38.25 1.82
2507 2549 8.697067 CAGCTGATACAACTTTTTCAGATTTTG 58.303 33.333 8.42 0.00 38.25 2.44
2508 2550 7.869429 AGCTGATACAACTTTTTCAGATTTTGG 59.131 33.333 3.11 0.00 38.25 3.28
2509 2551 7.359514 GCTGATACAACTTTTTCAGATTTTGGC 60.360 37.037 3.11 0.00 38.25 4.52
2510 2552 6.928492 TGATACAACTTTTTCAGATTTTGGCC 59.072 34.615 0.00 0.00 0.00 5.36
2511 2553 4.450976 ACAACTTTTTCAGATTTTGGCCC 58.549 39.130 0.00 0.00 0.00 5.80
2512 2554 3.385193 ACTTTTTCAGATTTTGGCCCG 57.615 42.857 0.00 0.00 0.00 6.13
2513 2555 2.068519 CTTTTTCAGATTTTGGCCCGC 58.931 47.619 0.00 0.00 0.00 6.13
2514 2556 1.043816 TTTTCAGATTTTGGCCCGCA 58.956 45.000 0.00 0.00 0.00 5.69
2515 2557 0.602562 TTTCAGATTTTGGCCCGCAG 59.397 50.000 0.00 0.00 0.00 5.18
2516 2558 1.876497 TTCAGATTTTGGCCCGCAGC 61.876 55.000 0.00 0.00 42.60 5.25
2517 2559 3.443045 AGATTTTGGCCCGCAGCG 61.443 61.111 8.18 8.18 45.17 5.18
2530 2572 1.818850 CGCAGCGGAATCAGATTTTG 58.181 50.000 7.00 0.00 0.00 2.44
2531 2573 1.532505 CGCAGCGGAATCAGATTTTGG 60.533 52.381 7.00 0.00 0.00 3.28
2532 2574 1.745087 GCAGCGGAATCAGATTTTGGA 59.255 47.619 0.00 0.00 0.00 3.53
2533 2575 2.164219 GCAGCGGAATCAGATTTTGGAA 59.836 45.455 0.00 0.00 0.00 3.53
2534 2576 3.367292 GCAGCGGAATCAGATTTTGGAAA 60.367 43.478 0.00 0.00 0.00 3.13
2535 2577 4.418392 CAGCGGAATCAGATTTTGGAAAG 58.582 43.478 0.00 0.00 0.00 2.62
2536 2578 3.119352 AGCGGAATCAGATTTTGGAAAGC 60.119 43.478 0.00 0.00 0.00 3.51
2537 2579 3.367292 GCGGAATCAGATTTTGGAAAGCA 60.367 43.478 0.00 0.00 0.00 3.91
2538 2580 4.168760 CGGAATCAGATTTTGGAAAGCAC 58.831 43.478 0.00 0.00 0.00 4.40
2539 2581 4.168760 GGAATCAGATTTTGGAAAGCACG 58.831 43.478 0.00 0.00 0.00 5.34
2540 2582 4.321230 GGAATCAGATTTTGGAAAGCACGT 60.321 41.667 0.00 0.00 0.00 4.49
2541 2583 3.896648 TCAGATTTTGGAAAGCACGTC 57.103 42.857 0.00 0.00 0.00 4.34
2542 2584 2.552315 TCAGATTTTGGAAAGCACGTCC 59.448 45.455 0.00 0.00 35.55 4.79
2543 2585 2.554032 CAGATTTTGGAAAGCACGTCCT 59.446 45.455 0.00 0.00 36.03 3.85
2544 2586 2.554032 AGATTTTGGAAAGCACGTCCTG 59.446 45.455 0.00 0.00 36.03 3.86
2545 2587 1.028905 TTTTGGAAAGCACGTCCTGG 58.971 50.000 0.00 0.00 36.03 4.45
2546 2588 0.821711 TTTGGAAAGCACGTCCTGGG 60.822 55.000 0.00 0.00 36.03 4.45
2547 2589 3.056328 GGAAAGCACGTCCTGGGC 61.056 66.667 0.00 0.00 31.94 5.36
2548 2590 2.032681 GAAAGCACGTCCTGGGCT 59.967 61.111 0.00 0.00 40.14 5.19
2549 2591 2.281761 AAAGCACGTCCTGGGCTG 60.282 61.111 0.00 0.00 38.04 4.85
2553 2595 2.743928 CACGTCCTGGGCTGCTTC 60.744 66.667 0.00 0.00 0.00 3.86
2554 2596 4.021925 ACGTCCTGGGCTGCTTCC 62.022 66.667 0.00 0.00 0.00 3.46
2558 2600 4.729918 CCTGGGCTGCTTCCGCTT 62.730 66.667 0.00 0.00 36.97 4.68
2559 2601 2.674380 CTGGGCTGCTTCCGCTTT 60.674 61.111 0.00 0.00 36.97 3.51
2560 2602 2.203480 TGGGCTGCTTCCGCTTTT 60.203 55.556 0.00 0.00 36.97 2.27
2561 2603 2.259511 GGGCTGCTTCCGCTTTTG 59.740 61.111 0.00 0.00 36.97 2.44
2562 2604 2.259511 GGCTGCTTCCGCTTTTGG 59.740 61.111 0.00 0.00 36.97 3.28
2563 2605 2.564721 GGCTGCTTCCGCTTTTGGT 61.565 57.895 0.00 0.00 36.97 3.67
2564 2606 1.363807 GCTGCTTCCGCTTTTGGTT 59.636 52.632 0.00 0.00 36.97 3.67
2565 2607 0.664466 GCTGCTTCCGCTTTTGGTTC 60.664 55.000 0.00 0.00 36.97 3.62
2566 2608 0.667993 CTGCTTCCGCTTTTGGTTCA 59.332 50.000 0.00 0.00 36.97 3.18
2567 2609 0.667993 TGCTTCCGCTTTTGGTTCAG 59.332 50.000 0.00 0.00 36.97 3.02
2568 2610 0.951558 GCTTCCGCTTTTGGTTCAGA 59.048 50.000 0.00 0.00 0.00 3.27
2569 2611 1.541588 GCTTCCGCTTTTGGTTCAGAT 59.458 47.619 0.00 0.00 0.00 2.90
2570 2612 2.029918 GCTTCCGCTTTTGGTTCAGATT 60.030 45.455 0.00 0.00 0.00 2.40
2571 2613 3.552890 GCTTCCGCTTTTGGTTCAGATTT 60.553 43.478 0.00 0.00 0.00 2.17
2572 2614 4.620982 CTTCCGCTTTTGGTTCAGATTTT 58.379 39.130 0.00 0.00 0.00 1.82
2573 2615 3.976169 TCCGCTTTTGGTTCAGATTTTG 58.024 40.909 0.00 0.00 0.00 2.44
2574 2616 3.059166 CCGCTTTTGGTTCAGATTTTGG 58.941 45.455 0.00 0.00 0.00 3.28
2575 2617 2.476241 CGCTTTTGGTTCAGATTTTGGC 59.524 45.455 0.00 0.00 0.00 4.52
2576 2618 3.465871 GCTTTTGGTTCAGATTTTGGCA 58.534 40.909 0.00 0.00 0.00 4.92
2577 2619 3.495753 GCTTTTGGTTCAGATTTTGGCAG 59.504 43.478 0.00 0.00 0.00 4.85
2578 2620 2.818130 TTGGTTCAGATTTTGGCAGC 57.182 45.000 0.00 0.00 0.00 5.25
2579 2621 1.702182 TGGTTCAGATTTTGGCAGCA 58.298 45.000 0.00 0.00 0.00 4.41
2580 2622 1.614903 TGGTTCAGATTTTGGCAGCAG 59.385 47.619 0.00 0.00 0.00 4.24
2581 2623 1.888512 GGTTCAGATTTTGGCAGCAGA 59.111 47.619 0.00 0.00 0.00 4.26
2582 2624 2.494870 GGTTCAGATTTTGGCAGCAGAT 59.505 45.455 0.00 0.00 0.00 2.90
2583 2625 3.056322 GGTTCAGATTTTGGCAGCAGATT 60.056 43.478 0.00 0.00 0.00 2.40
2584 2626 4.562143 GGTTCAGATTTTGGCAGCAGATTT 60.562 41.667 0.00 0.00 0.00 2.17
2585 2627 4.445452 TCAGATTTTGGCAGCAGATTTC 57.555 40.909 0.00 0.00 0.00 2.17
2586 2628 4.084287 TCAGATTTTGGCAGCAGATTTCT 58.916 39.130 0.00 0.00 0.00 2.52
2587 2629 4.082408 TCAGATTTTGGCAGCAGATTTCTG 60.082 41.667 3.13 3.13 46.40 3.02
2588 2630 3.194968 AGATTTTGGCAGCAGATTTCTGG 59.805 43.478 9.49 0.00 43.94 3.86
2589 2631 2.291209 TTTGGCAGCAGATTTCTGGA 57.709 45.000 9.49 0.00 43.94 3.86
2590 2632 2.291209 TTGGCAGCAGATTTCTGGAA 57.709 45.000 9.49 0.00 43.94 3.53
2591 2633 2.519771 TGGCAGCAGATTTCTGGAAT 57.480 45.000 9.49 0.00 43.94 3.01
2592 2634 2.372264 TGGCAGCAGATTTCTGGAATC 58.628 47.619 9.49 0.09 43.94 2.52
2601 2643 4.480386 GATTTCTGGAATCGGATTCTGC 57.520 45.455 25.29 13.44 39.24 4.26
2602 2644 3.634397 TTTCTGGAATCGGATTCTGCT 57.366 42.857 25.29 0.00 39.24 4.24
2603 2645 2.609427 TCTGGAATCGGATTCTGCTG 57.391 50.000 25.29 15.51 39.24 4.41
2604 2646 1.139654 TCTGGAATCGGATTCTGCTGG 59.860 52.381 25.29 13.47 39.24 4.85
2605 2647 0.181114 TGGAATCGGATTCTGCTGGG 59.819 55.000 25.29 0.00 39.24 4.45
2606 2648 0.181350 GGAATCGGATTCTGCTGGGT 59.819 55.000 25.29 0.00 39.24 4.51
2607 2649 1.408822 GGAATCGGATTCTGCTGGGTT 60.409 52.381 25.29 0.00 39.24 4.11
2608 2650 1.943340 GAATCGGATTCTGCTGGGTTC 59.057 52.381 20.70 0.00 36.37 3.62
2609 2651 0.179073 ATCGGATTCTGCTGGGTTCG 60.179 55.000 0.00 0.00 0.00 3.95
2610 2652 2.464459 CGGATTCTGCTGGGTTCGC 61.464 63.158 0.00 0.00 0.00 4.70
2611 2653 2.115291 GGATTCTGCTGGGTTCGCC 61.115 63.158 0.00 0.00 0.00 5.54
2621 2663 4.167597 GGTTCGCCCTTTGGTTCA 57.832 55.556 0.00 0.00 0.00 3.18
2622 2664 1.956802 GGTTCGCCCTTTGGTTCAG 59.043 57.895 0.00 0.00 0.00 3.02
2623 2665 0.536460 GGTTCGCCCTTTGGTTCAGA 60.536 55.000 0.00 0.00 0.00 3.27
2624 2666 1.534729 GTTCGCCCTTTGGTTCAGAT 58.465 50.000 0.00 0.00 0.00 2.90
2625 2667 1.886542 GTTCGCCCTTTGGTTCAGATT 59.113 47.619 0.00 0.00 0.00 2.40
2626 2668 1.821216 TCGCCCTTTGGTTCAGATTC 58.179 50.000 0.00 0.00 0.00 2.52
2627 2669 1.351017 TCGCCCTTTGGTTCAGATTCT 59.649 47.619 0.00 0.00 0.00 2.40
2628 2670 1.470098 CGCCCTTTGGTTCAGATTCTG 59.530 52.381 7.38 7.38 0.00 3.02
2629 2671 1.203287 GCCCTTTGGTTCAGATTCTGC 59.797 52.381 8.89 0.00 0.00 4.26
2630 2672 2.800250 CCCTTTGGTTCAGATTCTGCT 58.200 47.619 8.89 0.00 0.00 4.24
2631 2673 2.490903 CCCTTTGGTTCAGATTCTGCTG 59.509 50.000 8.89 0.00 37.24 4.41
2632 2674 2.094854 CCTTTGGTTCAGATTCTGCTGC 60.095 50.000 8.89 0.00 35.86 5.25
2633 2675 2.275134 TTGGTTCAGATTCTGCTGCA 57.725 45.000 8.89 0.88 35.86 4.41
2634 2676 1.527034 TGGTTCAGATTCTGCTGCAC 58.473 50.000 8.89 3.29 35.86 4.57
2635 2677 0.445436 GGTTCAGATTCTGCTGCACG 59.555 55.000 8.89 0.00 33.65 5.34
2636 2678 0.445436 GTTCAGATTCTGCTGCACGG 59.555 55.000 8.89 0.00 35.86 4.94
2637 2679 1.300971 TTCAGATTCTGCTGCACGGC 61.301 55.000 8.89 0.00 35.86 5.68
2638 2680 2.036571 CAGATTCTGCTGCACGGCA 61.037 57.895 0.00 3.76 40.15 5.69
2661 2703 3.940303 CGGAATCCGTTGATAAAAGCTG 58.060 45.455 14.46 0.00 42.73 4.24
2662 2704 3.621268 CGGAATCCGTTGATAAAAGCTGA 59.379 43.478 14.46 0.00 42.73 4.26
2663 2705 4.094294 CGGAATCCGTTGATAAAAGCTGAA 59.906 41.667 14.46 0.00 42.73 3.02
2664 2706 5.332707 GGAATCCGTTGATAAAAGCTGAAC 58.667 41.667 0.00 0.00 0.00 3.18
2665 2707 4.965119 ATCCGTTGATAAAAGCTGAACC 57.035 40.909 0.00 0.00 0.00 3.62
2666 2708 3.745799 TCCGTTGATAAAAGCTGAACCA 58.254 40.909 0.00 0.00 0.00 3.67
2667 2709 4.138290 TCCGTTGATAAAAGCTGAACCAA 58.862 39.130 0.00 0.00 0.00 3.67
2668 2710 4.580995 TCCGTTGATAAAAGCTGAACCAAA 59.419 37.500 0.00 0.00 0.00 3.28
2669 2711 4.679654 CCGTTGATAAAAGCTGAACCAAAC 59.320 41.667 0.00 0.00 0.00 2.93
2670 2712 5.277825 CGTTGATAAAAGCTGAACCAAACA 58.722 37.500 0.00 0.00 0.00 2.83
2671 2713 5.399301 CGTTGATAAAAGCTGAACCAAACAG 59.601 40.000 0.00 0.00 38.27 3.16
2672 2714 5.452078 TGATAAAAGCTGAACCAAACAGG 57.548 39.130 0.00 0.00 45.67 4.00
2673 2715 4.280677 TGATAAAAGCTGAACCAAACAGGG 59.719 41.667 0.00 0.00 43.89 4.45
2674 2716 0.752658 AAAGCTGAACCAAACAGGGC 59.247 50.000 0.00 0.00 43.89 5.19
2675 2717 1.115326 AAGCTGAACCAAACAGGGCC 61.115 55.000 0.00 0.00 43.89 5.80
2676 2718 1.531602 GCTGAACCAAACAGGGCCT 60.532 57.895 0.00 0.00 43.89 5.19
2677 2719 0.251165 GCTGAACCAAACAGGGCCTA 60.251 55.000 5.28 0.00 43.89 3.93
2678 2720 1.821666 GCTGAACCAAACAGGGCCTAA 60.822 52.381 5.28 0.00 43.89 2.69
2679 2721 2.162681 CTGAACCAAACAGGGCCTAAG 58.837 52.381 5.28 0.00 43.89 2.18
2687 2729 1.132500 ACAGGGCCTAAGTAGATGGC 58.868 55.000 5.28 0.00 45.42 4.40
2707 2749 4.022068 TGGCTTTCTCAACCATTTTAGCTG 60.022 41.667 0.00 0.00 0.00 4.24
2718 2760 6.903883 ACCATTTTAGCTGTATGTAAGTCG 57.096 37.500 0.00 0.00 0.00 4.18
2720 2762 5.277345 CCATTTTAGCTGTATGTAAGTCGCC 60.277 44.000 0.00 0.00 0.00 5.54
2755 2797 8.846943 AATTTGGGTAAATCAATTTTCTGACC 57.153 30.769 0.00 0.00 35.50 4.02
2784 2826 6.645700 TTCTTTTGTCAAGATTTGTGTTGC 57.354 33.333 0.00 0.00 0.00 4.17
2844 2888 3.056035 ACTTTAGACTTGCTCGGGTAAGG 60.056 47.826 17.83 0.82 39.05 2.69
2892 2936 4.159557 ACATGCCCCTGTTTTGATAAGTT 58.840 39.130 0.00 0.00 0.00 2.66
2941 2985 1.497286 TGGCTTGTTTGGGGTAAGTCT 59.503 47.619 0.00 0.00 0.00 3.24
2942 2986 1.886542 GGCTTGTTTGGGGTAAGTCTG 59.113 52.381 0.00 0.00 0.00 3.51
2943 2987 2.488347 GGCTTGTTTGGGGTAAGTCTGA 60.488 50.000 0.00 0.00 0.00 3.27
2944 2988 3.219281 GCTTGTTTGGGGTAAGTCTGAA 58.781 45.455 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 85 2.492881 TGGTCCGAAAGCACGTAAGATA 59.507 45.455 0.00 0.00 43.62 1.98
152 159 6.332735 AGAATTCAAACTTGCCTCCTAAAC 57.667 37.500 8.44 0.00 0.00 2.01
180 187 1.022451 TATTTGTTCGGCGTGGAGGC 61.022 55.000 6.85 0.00 42.76 4.70
344 352 1.102809 TTGGTCAAGCACAGGCACAG 61.103 55.000 0.00 0.00 44.61 3.66
345 353 1.077140 TTGGTCAAGCACAGGCACA 60.077 52.632 0.00 0.00 44.61 4.57
346 354 1.103398 ACTTGGTCAAGCACAGGCAC 61.103 55.000 10.31 0.00 44.61 5.01
347 355 0.472044 TACTTGGTCAAGCACAGGCA 59.528 50.000 10.31 0.00 44.61 4.75
348 356 0.875059 GTACTTGGTCAAGCACAGGC 59.125 55.000 10.31 0.00 41.99 4.85
349 357 1.148310 CGTACTTGGTCAAGCACAGG 58.852 55.000 10.31 0.00 41.99 4.00
372 380 3.649843 ACATTATGGAACGGAGGGAGTA 58.350 45.455 0.00 0.00 0.00 2.59
373 381 2.478292 ACATTATGGAACGGAGGGAGT 58.522 47.619 0.00 0.00 0.00 3.85
374 382 4.682778 TTACATTATGGAACGGAGGGAG 57.317 45.455 0.00 0.00 0.00 4.30
375 383 4.745478 GCATTACATTATGGAACGGAGGGA 60.745 45.833 0.00 0.00 0.00 4.20
376 384 3.502211 GCATTACATTATGGAACGGAGGG 59.498 47.826 0.00 0.00 0.00 4.30
377 385 3.502211 GGCATTACATTATGGAACGGAGG 59.498 47.826 0.00 0.00 0.00 4.30
378 386 4.389374 AGGCATTACATTATGGAACGGAG 58.611 43.478 0.00 0.00 0.00 4.63
379 387 4.431416 AGGCATTACATTATGGAACGGA 57.569 40.909 0.00 0.00 0.00 4.69
380 388 7.327975 TCTATAGGCATTACATTATGGAACGG 58.672 38.462 0.00 0.00 0.00 4.44
381 389 8.948631 ATCTATAGGCATTACATTATGGAACG 57.051 34.615 0.00 0.00 0.00 3.95
411 419 9.482627 TCAAAGTTTGTAATGTTTGACTTTTGT 57.517 25.926 15.08 0.00 35.75 2.83
414 422 9.868277 TGATCAAAGTTTGTAATGTTTGACTTT 57.132 25.926 15.08 0.00 40.67 2.66
416 424 9.467258 CATGATCAAAGTTTGTAATGTTTGACT 57.533 29.630 15.08 0.00 40.67 3.41
417 425 9.248291 ACATGATCAAAGTTTGTAATGTTTGAC 57.752 29.630 15.08 0.00 40.67 3.18
418 426 9.814899 AACATGATCAAAGTTTGTAATGTTTGA 57.185 25.926 24.39 5.82 41.74 2.69
455 463 9.338622 GCATTTGGTATTTTAGATGTACCTACT 57.661 33.333 0.00 0.00 38.89 2.57
456 464 9.116067 TGCATTTGGTATTTTAGATGTACCTAC 57.884 33.333 0.00 0.00 38.89 3.18
457 465 9.116067 GTGCATTTGGTATTTTAGATGTACCTA 57.884 33.333 0.00 0.00 38.89 3.08
458 466 7.613801 TGTGCATTTGGTATTTTAGATGTACCT 59.386 33.333 0.00 0.00 38.89 3.08
459 467 7.767261 TGTGCATTTGGTATTTTAGATGTACC 58.233 34.615 0.00 0.00 38.65 3.34
460 468 9.450807 GATGTGCATTTGGTATTTTAGATGTAC 57.549 33.333 0.00 0.00 32.91 2.90
461 469 9.183368 TGATGTGCATTTGGTATTTTAGATGTA 57.817 29.630 0.00 0.00 0.00 2.29
462 470 8.065473 TGATGTGCATTTGGTATTTTAGATGT 57.935 30.769 0.00 0.00 0.00 3.06
463 471 9.537192 AATGATGTGCATTTGGTATTTTAGATG 57.463 29.630 0.00 0.00 44.68 2.90
464 472 9.537192 CAATGATGTGCATTTGGTATTTTAGAT 57.463 29.630 0.00 0.00 44.68 1.98
465 473 7.980662 CCAATGATGTGCATTTGGTATTTTAGA 59.019 33.333 0.00 0.00 44.68 2.10
466 474 7.980662 TCCAATGATGTGCATTTGGTATTTTAG 59.019 33.333 12.63 0.00 44.68 1.85
467 475 7.845037 TCCAATGATGTGCATTTGGTATTTTA 58.155 30.769 12.63 0.00 44.68 1.52
468 476 6.709281 TCCAATGATGTGCATTTGGTATTTT 58.291 32.000 12.63 0.00 44.68 1.82
469 477 6.297080 TCCAATGATGTGCATTTGGTATTT 57.703 33.333 12.63 0.00 44.68 1.40
470 478 5.936187 TCCAATGATGTGCATTTGGTATT 57.064 34.783 12.63 0.00 44.68 1.89
471 479 6.550481 TGTATCCAATGATGTGCATTTGGTAT 59.450 34.615 12.63 9.03 44.68 2.73
472 480 5.890419 TGTATCCAATGATGTGCATTTGGTA 59.110 36.000 12.63 5.40 44.68 3.25
473 481 4.710865 TGTATCCAATGATGTGCATTTGGT 59.289 37.500 12.63 6.06 44.68 3.67
474 482 5.265350 TGTATCCAATGATGTGCATTTGG 57.735 39.130 8.57 8.57 44.68 3.28
475 483 5.627780 CGATGTATCCAATGATGTGCATTTG 59.372 40.000 0.00 0.00 44.68 2.32
476 484 5.300034 ACGATGTATCCAATGATGTGCATTT 59.700 36.000 0.00 0.00 44.68 2.32
478 486 4.214758 CACGATGTATCCAATGATGTGCAT 59.785 41.667 0.00 0.00 39.43 3.96
479 487 3.560896 CACGATGTATCCAATGATGTGCA 59.439 43.478 0.00 0.00 32.18 4.57
480 488 3.809279 TCACGATGTATCCAATGATGTGC 59.191 43.478 0.00 0.00 32.18 4.57
481 489 5.052481 ACTCACGATGTATCCAATGATGTG 58.948 41.667 0.00 0.00 32.18 3.21
482 490 5.282055 ACTCACGATGTATCCAATGATGT 57.718 39.130 0.00 0.00 32.18 3.06
483 491 7.895975 ATTACTCACGATGTATCCAATGATG 57.104 36.000 0.00 0.00 32.18 3.07
485 493 9.996554 AAATATTACTCACGATGTATCCAATGA 57.003 29.630 0.00 0.00 0.00 2.57
488 496 9.825109 TGAAAATATTACTCACGATGTATCCAA 57.175 29.630 0.00 0.00 0.00 3.53
489 497 9.476202 CTGAAAATATTACTCACGATGTATCCA 57.524 33.333 0.00 0.00 0.00 3.41
490 498 9.692749 TCTGAAAATATTACTCACGATGTATCC 57.307 33.333 0.00 0.00 0.00 2.59
494 502 9.383519 ACATTCTGAAAATATTACTCACGATGT 57.616 29.630 0.00 12.59 0.00 3.06
497 505 9.863845 TGTACATTCTGAAAATATTACTCACGA 57.136 29.630 0.00 0.00 0.00 4.35
509 517 9.689976 CAATACCAAACATGTACATTCTGAAAA 57.310 29.630 5.37 0.00 0.00 2.29
510 518 8.855110 ACAATACCAAACATGTACATTCTGAAA 58.145 29.630 5.37 0.00 0.00 2.69
511 519 8.402798 ACAATACCAAACATGTACATTCTGAA 57.597 30.769 5.37 0.00 0.00 3.02
512 520 7.994425 ACAATACCAAACATGTACATTCTGA 57.006 32.000 5.37 0.00 0.00 3.27
513 521 9.161629 TCTACAATACCAAACATGTACATTCTG 57.838 33.333 5.37 0.00 0.00 3.02
514 522 9.905713 ATCTACAATACCAAACATGTACATTCT 57.094 29.630 5.37 0.00 0.00 2.40
515 523 9.935682 CATCTACAATACCAAACATGTACATTC 57.064 33.333 5.37 0.00 0.00 2.67
516 524 9.461312 ACATCTACAATACCAAACATGTACATT 57.539 29.630 5.37 0.00 0.00 2.71
550 558 8.410141 CCAACTTTGACCAAGTGTATAGAAAAA 58.590 33.333 0.00 0.00 45.77 1.94
551 559 7.469456 GCCAACTTTGACCAAGTGTATAGAAAA 60.469 37.037 0.00 0.00 45.77 2.29
552 560 6.016610 GCCAACTTTGACCAAGTGTATAGAAA 60.017 38.462 0.00 0.00 45.77 2.52
553 561 5.472137 GCCAACTTTGACCAAGTGTATAGAA 59.528 40.000 0.00 0.00 45.77 2.10
554 562 5.001232 GCCAACTTTGACCAAGTGTATAGA 58.999 41.667 0.00 0.00 45.77 1.98
555 563 4.759693 TGCCAACTTTGACCAAGTGTATAG 59.240 41.667 0.00 0.00 45.77 1.31
556 564 4.720046 TGCCAACTTTGACCAAGTGTATA 58.280 39.130 0.00 0.00 45.77 1.47
557 565 3.561143 TGCCAACTTTGACCAAGTGTAT 58.439 40.909 0.00 0.00 45.77 2.29
558 566 3.006112 TGCCAACTTTGACCAAGTGTA 57.994 42.857 0.00 0.00 45.77 2.90
559 567 1.846007 TGCCAACTTTGACCAAGTGT 58.154 45.000 0.00 0.00 45.77 3.55
560 568 2.957491 TTGCCAACTTTGACCAAGTG 57.043 45.000 0.00 0.00 45.77 3.16
562 570 3.525268 ACTTTGCCAACTTTGACCAAG 57.475 42.857 0.00 0.00 38.64 3.61
563 571 3.971245 AACTTTGCCAACTTTGACCAA 57.029 38.095 0.00 0.00 0.00 3.67
564 572 3.259374 TCAAACTTTGCCAACTTTGACCA 59.741 39.130 5.68 0.00 29.66 4.02
565 573 3.616821 GTCAAACTTTGCCAACTTTGACC 59.383 43.478 19.93 9.30 43.35 4.02
566 574 4.494484 AGTCAAACTTTGCCAACTTTGAC 58.506 39.130 21.64 21.64 46.84 3.18
567 575 4.799564 AGTCAAACTTTGCCAACTTTGA 57.200 36.364 5.68 5.68 31.68 2.69
568 576 5.861222 AAAGTCAAACTTTGCCAACTTTG 57.139 34.783 14.50 1.84 45.83 2.77
569 577 6.931840 TGTAAAAGTCAAACTTTGCCAACTTT 59.068 30.769 11.40 11.40 46.78 2.66
570 578 6.459923 TGTAAAAGTCAAACTTTGCCAACTT 58.540 32.000 5.88 0.00 46.78 2.66
571 579 6.031751 TGTAAAAGTCAAACTTTGCCAACT 57.968 33.333 5.88 0.00 46.78 3.16
572 580 6.713792 TTGTAAAAGTCAAACTTTGCCAAC 57.286 33.333 5.88 4.10 46.78 3.77
573 581 7.730364 TTTTGTAAAAGTCAAACTTTGCCAA 57.270 28.000 5.88 8.74 46.78 4.52
574 582 7.730364 TTTTTGTAAAAGTCAAACTTTGCCA 57.270 28.000 5.88 3.77 46.78 4.92
575 583 8.664798 AGATTTTTGTAAAAGTCAAACTTTGCC 58.335 29.630 12.93 1.49 46.78 4.52
584 592 9.515226 AGTGCCTATAGATTTTTGTAAAAGTCA 57.485 29.630 12.93 2.88 37.17 3.41
591 599 9.899661 ACAATGTAGTGCCTATAGATTTTTGTA 57.100 29.630 0.00 0.00 0.00 2.41
592 600 8.677300 CACAATGTAGTGCCTATAGATTTTTGT 58.323 33.333 0.00 0.00 32.04 2.83
593 601 8.131100 CCACAATGTAGTGCCTATAGATTTTTG 58.869 37.037 0.00 0.00 38.18 2.44
594 602 8.052748 TCCACAATGTAGTGCCTATAGATTTTT 58.947 33.333 0.00 0.00 38.18 1.94
595 603 7.573710 TCCACAATGTAGTGCCTATAGATTTT 58.426 34.615 0.00 0.00 38.18 1.82
596 604 7.136822 TCCACAATGTAGTGCCTATAGATTT 57.863 36.000 0.00 0.00 38.18 2.17
597 605 6.747414 TCCACAATGTAGTGCCTATAGATT 57.253 37.500 0.00 0.00 38.18 2.40
598 606 6.747414 TTCCACAATGTAGTGCCTATAGAT 57.253 37.500 0.00 0.00 38.18 1.98
599 607 6.464322 CCATTCCACAATGTAGTGCCTATAGA 60.464 42.308 0.00 0.00 38.22 1.98
600 608 5.702670 CCATTCCACAATGTAGTGCCTATAG 59.297 44.000 0.00 0.00 38.22 1.31
601 609 5.368230 TCCATTCCACAATGTAGTGCCTATA 59.632 40.000 0.00 0.00 38.22 1.31
602 610 4.165950 TCCATTCCACAATGTAGTGCCTAT 59.834 41.667 0.00 0.00 38.22 2.57
603 611 3.521531 TCCATTCCACAATGTAGTGCCTA 59.478 43.478 0.00 0.00 38.22 3.93
604 612 2.308570 TCCATTCCACAATGTAGTGCCT 59.691 45.455 0.00 0.00 38.22 4.75
605 613 2.684881 CTCCATTCCACAATGTAGTGCC 59.315 50.000 0.00 0.00 38.22 5.01
606 614 2.684881 CCTCCATTCCACAATGTAGTGC 59.315 50.000 0.00 0.00 38.22 4.40
607 615 3.054434 TCCCTCCATTCCACAATGTAGTG 60.054 47.826 0.00 0.00 38.22 2.74
608 616 3.189606 TCCCTCCATTCCACAATGTAGT 58.810 45.455 0.00 0.00 38.22 2.73
609 617 3.200825 ACTCCCTCCATTCCACAATGTAG 59.799 47.826 0.00 0.00 38.22 2.74
610 618 3.189606 ACTCCCTCCATTCCACAATGTA 58.810 45.455 0.00 0.00 38.22 2.29
611 619 1.995542 ACTCCCTCCATTCCACAATGT 59.004 47.619 0.00 0.00 38.22 2.71
612 620 2.814805 ACTCCCTCCATTCCACAATG 57.185 50.000 0.00 0.00 39.45 2.82
613 621 2.170607 CGTACTCCCTCCATTCCACAAT 59.829 50.000 0.00 0.00 0.00 2.71
614 622 1.553248 CGTACTCCCTCCATTCCACAA 59.447 52.381 0.00 0.00 0.00 3.33
615 623 1.191535 CGTACTCCCTCCATTCCACA 58.808 55.000 0.00 0.00 0.00 4.17
616 624 1.481871 TCGTACTCCCTCCATTCCAC 58.518 55.000 0.00 0.00 0.00 4.02
617 625 1.829222 GTTCGTACTCCCTCCATTCCA 59.171 52.381 0.00 0.00 0.00 3.53
618 626 1.829222 TGTTCGTACTCCCTCCATTCC 59.171 52.381 0.00 0.00 0.00 3.01
619 627 3.056035 ACTTGTTCGTACTCCCTCCATTC 60.056 47.826 0.00 0.00 0.00 2.67
620 628 2.904434 ACTTGTTCGTACTCCCTCCATT 59.096 45.455 0.00 0.00 0.00 3.16
621 629 2.233922 CACTTGTTCGTACTCCCTCCAT 59.766 50.000 0.00 0.00 0.00 3.41
622 630 1.616865 CACTTGTTCGTACTCCCTCCA 59.383 52.381 0.00 0.00 0.00 3.86
623 631 1.617357 ACACTTGTTCGTACTCCCTCC 59.383 52.381 0.00 0.00 0.00 4.30
624 632 2.667724 CGACACTTGTTCGTACTCCCTC 60.668 54.545 0.00 0.00 0.00 4.30
625 633 1.268899 CGACACTTGTTCGTACTCCCT 59.731 52.381 0.00 0.00 0.00 4.20
626 634 1.694639 CGACACTTGTTCGTACTCCC 58.305 55.000 0.00 0.00 0.00 4.30
627 635 1.058404 GCGACACTTGTTCGTACTCC 58.942 55.000 0.00 0.00 0.00 3.85
628 636 1.058404 GGCGACACTTGTTCGTACTC 58.942 55.000 0.00 0.00 0.00 2.59
629 637 0.662374 CGGCGACACTTGTTCGTACT 60.662 55.000 0.00 0.00 0.00 2.73
630 638 1.611592 CCGGCGACACTTGTTCGTAC 61.612 60.000 9.30 0.00 0.00 3.67
677 685 7.979444 ATGAAATGTTCAGGGTTATATACGG 57.021 36.000 0.00 0.00 43.98 4.02
749 759 2.428902 CGCCATTTGCACACACGG 60.429 61.111 0.00 0.00 41.33 4.94
845 855 0.914417 ACATCGGGGTTGGAGTGGAT 60.914 55.000 0.00 0.00 0.00 3.41
961 978 2.890766 GCAGGTCCTTCCGGGTTGA 61.891 63.158 0.00 0.00 41.99 3.18
1131 1148 1.903877 CGAAGGTGGTGGAGCTGGAT 61.904 60.000 0.00 0.00 30.84 3.41
1460 1477 1.003580 TGCTGTTGGAGTCCTGGAATC 59.996 52.381 15.49 15.49 0.00 2.52
1471 1488 2.661537 CGTGCTCGTGCTGTTGGA 60.662 61.111 11.19 0.00 40.48 3.53
1545 1562 4.776322 TTCGATGGGCTGGCCACG 62.776 66.667 26.41 26.71 37.98 4.94
1710 1727 4.840288 TGGTACGCCGCGTCGATG 62.840 66.667 23.94 0.00 41.54 3.84
1711 1728 4.547905 CTGGTACGCCGCGTCGAT 62.548 66.667 23.94 2.82 41.54 3.59
1722 1739 2.033194 GGCACGGACTTGCTGGTAC 61.033 63.158 0.81 0.00 42.56 3.34
1950 1967 2.644418 GTGCTCATTGCGCCAACA 59.356 55.556 4.18 0.00 45.73 3.33
2072 2089 9.643693 CAGACATGCATGTACACATATATTAGA 57.356 33.333 31.45 0.00 41.95 2.10
2074 2091 7.334171 GCCAGACATGCATGTACACATATATTA 59.666 37.037 31.45 0.00 41.95 0.98
2080 2097 2.019249 GCCAGACATGCATGTACACAT 58.981 47.619 31.45 12.86 41.95 3.21
2156 2174 6.668323 ACAATTTACAATCTGAACTCAACGG 58.332 36.000 0.00 0.00 0.00 4.44
2157 2175 9.265938 CATACAATTTACAATCTGAACTCAACG 57.734 33.333 0.00 0.00 0.00 4.10
2189 2209 1.067516 CAGCCTCCCCGCAAATAAATG 59.932 52.381 0.00 0.00 0.00 2.32
2236 2260 1.673168 GCATGAAGGTGAGTGGGATC 58.327 55.000 0.00 0.00 0.00 3.36
2260 2284 9.696917 AAGCCATTTTTCTAGTTCTGTTTTATG 57.303 29.630 0.00 0.00 0.00 1.90
2262 2286 9.744468 GAAAGCCATTTTTCTAGTTCTGTTTTA 57.256 29.630 0.00 0.00 34.87 1.52
2277 2301 9.002600 GTCCATTTTGAATTAGAAAGCCATTTT 57.997 29.630 0.00 0.00 0.00 1.82
2282 2306 8.739972 TCTTAGTCCATTTTGAATTAGAAAGCC 58.260 33.333 0.00 0.00 0.00 4.35
2368 2410 0.250989 CCGAACCAAACAGGGCCTTA 60.251 55.000 1.32 0.00 43.89 2.69
2371 2413 2.757980 TAGCCGAACCAAACAGGGCC 62.758 60.000 0.00 0.00 44.82 5.80
2372 2414 0.679960 ATAGCCGAACCAAACAGGGC 60.680 55.000 0.00 0.00 43.89 5.19
2373 2415 1.094785 CATAGCCGAACCAAACAGGG 58.905 55.000 0.00 0.00 43.89 4.45
2374 2416 1.094785 CCATAGCCGAACCAAACAGG 58.905 55.000 0.00 0.00 45.67 4.00
2375 2417 2.107950 TCCATAGCCGAACCAAACAG 57.892 50.000 0.00 0.00 0.00 3.16
2376 2418 2.799126 ATCCATAGCCGAACCAAACA 57.201 45.000 0.00 0.00 0.00 2.83
2377 2419 3.694566 AGAAATCCATAGCCGAACCAAAC 59.305 43.478 0.00 0.00 0.00 2.93
2378 2420 3.963129 AGAAATCCATAGCCGAACCAAA 58.037 40.909 0.00 0.00 0.00 3.28
2379 2421 3.644966 AGAAATCCATAGCCGAACCAA 57.355 42.857 0.00 0.00 0.00 3.67
2380 2422 4.764050 TTAGAAATCCATAGCCGAACCA 57.236 40.909 0.00 0.00 0.00 3.67
2381 2423 5.505819 GCTTTTAGAAATCCATAGCCGAACC 60.506 44.000 0.00 0.00 0.00 3.62
2382 2424 5.065988 TGCTTTTAGAAATCCATAGCCGAAC 59.934 40.000 0.00 0.00 0.00 3.95
2383 2425 5.189928 TGCTTTTAGAAATCCATAGCCGAA 58.810 37.500 0.00 0.00 0.00 4.30
2384 2426 4.776349 TGCTTTTAGAAATCCATAGCCGA 58.224 39.130 0.00 0.00 0.00 5.54
2385 2427 4.555511 GCTGCTTTTAGAAATCCATAGCCG 60.556 45.833 0.00 0.00 0.00 5.52
2386 2428 4.582240 AGCTGCTTTTAGAAATCCATAGCC 59.418 41.667 0.00 0.00 0.00 3.93
2387 2429 5.067023 ACAGCTGCTTTTAGAAATCCATAGC 59.933 40.000 15.27 0.00 0.00 2.97
2388 2430 6.317140 TCACAGCTGCTTTTAGAAATCCATAG 59.683 38.462 15.27 0.00 0.00 2.23
2389 2431 6.179756 TCACAGCTGCTTTTAGAAATCCATA 58.820 36.000 15.27 0.00 0.00 2.74
2390 2432 5.012239 TCACAGCTGCTTTTAGAAATCCAT 58.988 37.500 15.27 0.00 0.00 3.41
2391 2433 4.397420 TCACAGCTGCTTTTAGAAATCCA 58.603 39.130 15.27 0.00 0.00 3.41
2392 2434 5.376854 TTCACAGCTGCTTTTAGAAATCC 57.623 39.130 15.27 0.00 0.00 3.01
2393 2435 7.698836 TTTTTCACAGCTGCTTTTAGAAATC 57.301 32.000 15.27 0.00 0.00 2.17
2394 2436 8.146412 AGATTTTTCACAGCTGCTTTTAGAAAT 58.854 29.630 15.27 10.98 0.00 2.17
2395 2437 7.436080 CAGATTTTTCACAGCTGCTTTTAGAAA 59.564 33.333 15.27 11.50 0.00 2.52
2396 2438 6.919662 CAGATTTTTCACAGCTGCTTTTAGAA 59.080 34.615 15.27 5.96 0.00 2.10
2397 2439 6.441274 CAGATTTTTCACAGCTGCTTTTAGA 58.559 36.000 15.27 0.00 0.00 2.10
2398 2440 5.118203 GCAGATTTTTCACAGCTGCTTTTAG 59.882 40.000 15.27 0.00 46.17 1.85
2399 2441 4.984161 GCAGATTTTTCACAGCTGCTTTTA 59.016 37.500 15.27 0.00 46.17 1.52
2400 2442 3.805971 GCAGATTTTTCACAGCTGCTTTT 59.194 39.130 15.27 0.00 46.17 2.27
2401 2443 3.387397 GCAGATTTTTCACAGCTGCTTT 58.613 40.909 15.27 0.00 46.17 3.51
2402 2444 3.022607 GCAGATTTTTCACAGCTGCTT 57.977 42.857 15.27 0.00 46.17 3.91
2403 2445 2.719426 GCAGATTTTTCACAGCTGCT 57.281 45.000 15.27 0.00 46.17 4.24
2406 2448 2.295349 CCACAGCAGATTTTTCACAGCT 59.705 45.455 0.00 0.00 0.00 4.24
2407 2449 2.294233 TCCACAGCAGATTTTTCACAGC 59.706 45.455 0.00 0.00 0.00 4.40
2408 2450 4.572985 TTCCACAGCAGATTTTTCACAG 57.427 40.909 0.00 0.00 0.00 3.66
2409 2451 4.998671 TTTCCACAGCAGATTTTTCACA 57.001 36.364 0.00 0.00 0.00 3.58
2410 2452 5.580297 TGTTTTTCCACAGCAGATTTTTCAC 59.420 36.000 0.00 0.00 0.00 3.18
2411 2453 5.728471 TGTTTTTCCACAGCAGATTTTTCA 58.272 33.333 0.00 0.00 0.00 2.69
2412 2454 6.277918 CTGTTTTTCCACAGCAGATTTTTC 57.722 37.500 0.00 0.00 37.96 2.29
2423 2465 4.873746 TTTCCACAACTGTTTTTCCACA 57.126 36.364 0.00 0.00 0.00 4.17
2424 2466 6.035975 CAGATTTTCCACAACTGTTTTTCCAC 59.964 38.462 0.00 0.00 0.00 4.02
2425 2467 6.071108 TCAGATTTTCCACAACTGTTTTTCCA 60.071 34.615 0.00 0.00 0.00 3.53
2426 2468 6.337356 TCAGATTTTCCACAACTGTTTTTCC 58.663 36.000 0.00 0.00 0.00 3.13
2427 2469 8.424274 AATCAGATTTTCCACAACTGTTTTTC 57.576 30.769 0.00 0.00 0.00 2.29
2428 2470 8.667463 CAAATCAGATTTTCCACAACTGTTTTT 58.333 29.630 5.58 0.00 32.16 1.94
2429 2471 8.040132 TCAAATCAGATTTTCCACAACTGTTTT 58.960 29.630 5.58 0.00 33.64 2.43
2430 2472 7.555087 TCAAATCAGATTTTCCACAACTGTTT 58.445 30.769 5.58 0.00 0.00 2.83
2431 2473 7.111247 TCAAATCAGATTTTCCACAACTGTT 57.889 32.000 5.58 0.00 0.00 3.16
2432 2474 6.713762 TCAAATCAGATTTTCCACAACTGT 57.286 33.333 5.58 0.00 0.00 3.55
2433 2475 8.422973 TTTTCAAATCAGATTTTCCACAACTG 57.577 30.769 5.58 0.00 0.00 3.16
2434 2476 9.101655 CTTTTTCAAATCAGATTTTCCACAACT 57.898 29.630 5.58 0.00 0.00 3.16
2435 2477 9.097257 TCTTTTTCAAATCAGATTTTCCACAAC 57.903 29.630 5.58 0.00 0.00 3.32
2436 2478 9.835389 ATCTTTTTCAAATCAGATTTTCCACAA 57.165 25.926 5.58 0.00 0.00 3.33
2450 2492 9.822185 GCCAAATGACCTATATCTTTTTCAAAT 57.178 29.630 0.00 0.00 0.00 2.32
2451 2493 8.811017 TGCCAAATGACCTATATCTTTTTCAAA 58.189 29.630 0.00 0.00 0.00 2.69
2452 2494 8.359875 TGCCAAATGACCTATATCTTTTTCAA 57.640 30.769 0.00 0.00 0.00 2.69
2453 2495 7.953005 TGCCAAATGACCTATATCTTTTTCA 57.047 32.000 0.00 0.00 0.00 2.69
2454 2496 9.087424 GTTTGCCAAATGACCTATATCTTTTTC 57.913 33.333 0.00 0.00 0.00 2.29
2455 2497 8.040727 GGTTTGCCAAATGACCTATATCTTTTT 58.959 33.333 0.00 0.00 34.09 1.94
2456 2498 7.180051 TGGTTTGCCAAATGACCTATATCTTTT 59.820 33.333 0.00 0.00 42.83 2.27
2457 2499 6.667414 TGGTTTGCCAAATGACCTATATCTTT 59.333 34.615 0.00 0.00 42.83 2.52
2458 2500 6.194235 TGGTTTGCCAAATGACCTATATCTT 58.806 36.000 0.00 0.00 42.83 2.40
2459 2501 5.765510 TGGTTTGCCAAATGACCTATATCT 58.234 37.500 0.00 0.00 42.83 1.98
2460 2502 5.507985 GCTGGTTTGCCAAATGACCTATATC 60.508 44.000 0.00 0.00 45.51 1.63
2461 2503 4.342092 GCTGGTTTGCCAAATGACCTATAT 59.658 41.667 0.00 0.00 45.51 0.86
2462 2504 3.699038 GCTGGTTTGCCAAATGACCTATA 59.301 43.478 0.00 0.00 45.51 1.31
2463 2505 2.497273 GCTGGTTTGCCAAATGACCTAT 59.503 45.455 0.00 0.00 45.51 2.57
2464 2506 1.892474 GCTGGTTTGCCAAATGACCTA 59.108 47.619 0.00 0.00 45.51 3.08
2465 2507 0.681175 GCTGGTTTGCCAAATGACCT 59.319 50.000 0.00 0.00 45.51 3.85
2466 2508 0.681175 AGCTGGTTTGCCAAATGACC 59.319 50.000 0.00 0.00 45.51 4.02
2467 2509 1.340889 TCAGCTGGTTTGCCAAATGAC 59.659 47.619 15.13 0.00 45.51 3.06
2468 2510 1.702182 TCAGCTGGTTTGCCAAATGA 58.298 45.000 15.13 0.00 45.51 2.57
2469 2511 2.754946 ATCAGCTGGTTTGCCAAATG 57.245 45.000 15.13 0.00 45.51 2.32
2470 2512 3.164268 TGTATCAGCTGGTTTGCCAAAT 58.836 40.909 15.13 0.00 45.51 2.32
2471 2513 2.591923 TGTATCAGCTGGTTTGCCAAA 58.408 42.857 15.13 0.00 45.51 3.28
2472 2514 2.284754 TGTATCAGCTGGTTTGCCAA 57.715 45.000 15.13 0.00 45.51 4.52
2473 2515 1.885887 GTTGTATCAGCTGGTTTGCCA 59.114 47.619 15.13 0.00 43.73 4.92
2474 2516 2.162681 AGTTGTATCAGCTGGTTTGCC 58.837 47.619 15.13 0.00 0.00 4.52
2475 2517 3.923017 AAGTTGTATCAGCTGGTTTGC 57.077 42.857 15.13 3.72 0.00 3.68
2476 2518 6.272318 TGAAAAAGTTGTATCAGCTGGTTTG 58.728 36.000 15.13 0.00 0.00 2.93
2477 2519 6.321181 TCTGAAAAAGTTGTATCAGCTGGTTT 59.679 34.615 15.13 1.77 39.27 3.27
2478 2520 5.827797 TCTGAAAAAGTTGTATCAGCTGGTT 59.172 36.000 15.13 4.51 39.27 3.67
2479 2521 5.376625 TCTGAAAAAGTTGTATCAGCTGGT 58.623 37.500 15.13 9.93 39.27 4.00
2480 2522 5.947228 TCTGAAAAAGTTGTATCAGCTGG 57.053 39.130 15.13 0.00 39.27 4.85
2481 2523 8.697067 CAAAATCTGAAAAAGTTGTATCAGCTG 58.303 33.333 7.63 7.63 39.27 4.24
2482 2524 7.869429 CCAAAATCTGAAAAAGTTGTATCAGCT 59.131 33.333 7.57 0.00 39.27 4.24
2483 2525 7.359514 GCCAAAATCTGAAAAAGTTGTATCAGC 60.360 37.037 7.57 0.00 39.27 4.26
2484 2526 7.116805 GGCCAAAATCTGAAAAAGTTGTATCAG 59.883 37.037 0.00 6.51 40.46 2.90
2485 2527 6.928492 GGCCAAAATCTGAAAAAGTTGTATCA 59.072 34.615 0.00 0.00 0.00 2.15
2486 2528 6.368791 GGGCCAAAATCTGAAAAAGTTGTATC 59.631 38.462 4.39 0.00 0.00 2.24
2487 2529 6.230472 GGGCCAAAATCTGAAAAAGTTGTAT 58.770 36.000 4.39 0.00 0.00 2.29
2488 2530 5.606505 GGGCCAAAATCTGAAAAAGTTGTA 58.393 37.500 4.39 0.00 0.00 2.41
2489 2531 4.450976 GGGCCAAAATCTGAAAAAGTTGT 58.549 39.130 4.39 0.00 0.00 3.32
2490 2532 3.494251 CGGGCCAAAATCTGAAAAAGTTG 59.506 43.478 4.39 0.00 0.00 3.16
2491 2533 3.727726 CGGGCCAAAATCTGAAAAAGTT 58.272 40.909 4.39 0.00 0.00 2.66
2492 2534 2.547855 GCGGGCCAAAATCTGAAAAAGT 60.548 45.455 4.39 0.00 0.00 2.66
2493 2535 2.068519 GCGGGCCAAAATCTGAAAAAG 58.931 47.619 4.39 0.00 0.00 2.27
2494 2536 1.414181 TGCGGGCCAAAATCTGAAAAA 59.586 42.857 4.39 0.00 0.00 1.94
2495 2537 1.000731 CTGCGGGCCAAAATCTGAAAA 59.999 47.619 4.39 0.00 0.00 2.29
2496 2538 0.602562 CTGCGGGCCAAAATCTGAAA 59.397 50.000 4.39 0.00 0.00 2.69
2497 2539 1.876497 GCTGCGGGCCAAAATCTGAA 61.876 55.000 4.39 0.00 34.27 3.02
2498 2540 2.342650 GCTGCGGGCCAAAATCTGA 61.343 57.895 4.39 0.00 34.27 3.27
2499 2541 2.182537 GCTGCGGGCCAAAATCTG 59.817 61.111 4.39 0.00 34.27 2.90
2500 2542 3.443045 CGCTGCGGGCCAAAATCT 61.443 61.111 15.40 0.00 37.74 2.40
2501 2543 4.496927 CCGCTGCGGGCCAAAATC 62.497 66.667 32.37 0.00 44.15 2.17
2511 2553 1.532505 CCAAAATCTGATTCCGCTGCG 60.533 52.381 16.34 16.34 0.00 5.18
2512 2554 1.745087 TCCAAAATCTGATTCCGCTGC 59.255 47.619 2.92 0.00 0.00 5.25
2513 2555 4.418392 CTTTCCAAAATCTGATTCCGCTG 58.582 43.478 2.92 0.03 0.00 5.18
2514 2556 3.119352 GCTTTCCAAAATCTGATTCCGCT 60.119 43.478 2.92 0.00 0.00 5.52
2515 2557 3.182182 GCTTTCCAAAATCTGATTCCGC 58.818 45.455 2.92 0.00 0.00 5.54
2516 2558 4.168760 GTGCTTTCCAAAATCTGATTCCG 58.831 43.478 2.92 0.00 0.00 4.30
2517 2559 4.168760 CGTGCTTTCCAAAATCTGATTCC 58.831 43.478 2.92 0.00 0.00 3.01
2518 2560 4.798574 ACGTGCTTTCCAAAATCTGATTC 58.201 39.130 2.92 0.00 0.00 2.52
2519 2561 4.321230 GGACGTGCTTTCCAAAATCTGATT 60.321 41.667 0.00 0.00 32.82 2.57
2520 2562 3.191371 GGACGTGCTTTCCAAAATCTGAT 59.809 43.478 0.00 0.00 32.82 2.90
2521 2563 2.552315 GGACGTGCTTTCCAAAATCTGA 59.448 45.455 0.00 0.00 32.82 3.27
2522 2564 2.554032 AGGACGTGCTTTCCAAAATCTG 59.446 45.455 2.68 0.00 35.33 2.90
2523 2565 2.554032 CAGGACGTGCTTTCCAAAATCT 59.446 45.455 6.93 0.00 35.33 2.40
2524 2566 2.351738 CCAGGACGTGCTTTCCAAAATC 60.352 50.000 6.93 0.00 35.33 2.17
2525 2567 1.613437 CCAGGACGTGCTTTCCAAAAT 59.387 47.619 6.93 0.00 35.33 1.82
2526 2568 1.028905 CCAGGACGTGCTTTCCAAAA 58.971 50.000 6.93 0.00 35.33 2.44
2527 2569 0.821711 CCCAGGACGTGCTTTCCAAA 60.822 55.000 6.93 0.00 35.33 3.28
2528 2570 1.228124 CCCAGGACGTGCTTTCCAA 60.228 57.895 6.93 0.00 35.33 3.53
2529 2571 2.429930 CCCAGGACGTGCTTTCCA 59.570 61.111 6.93 0.00 35.33 3.53
2530 2572 3.056328 GCCCAGGACGTGCTTTCC 61.056 66.667 6.93 0.00 0.00 3.13
2531 2573 2.032681 AGCCCAGGACGTGCTTTC 59.967 61.111 6.93 0.00 29.17 2.62
2532 2574 2.281761 CAGCCCAGGACGTGCTTT 60.282 61.111 6.93 0.00 31.77 3.51
2536 2578 2.743928 GAAGCAGCCCAGGACGTG 60.744 66.667 0.00 0.00 0.00 4.49
2537 2579 4.021925 GGAAGCAGCCCAGGACGT 62.022 66.667 0.00 0.00 0.00 4.34
2550 2592 3.923017 AATCTGAACCAAAAGCGGAAG 57.077 42.857 0.00 0.00 0.00 3.46
2551 2593 4.367450 CAAAATCTGAACCAAAAGCGGAA 58.633 39.130 0.00 0.00 0.00 4.30
2552 2594 3.243704 CCAAAATCTGAACCAAAAGCGGA 60.244 43.478 0.00 0.00 0.00 5.54
2553 2595 3.059166 CCAAAATCTGAACCAAAAGCGG 58.941 45.455 0.00 0.00 0.00 5.52
2554 2596 2.476241 GCCAAAATCTGAACCAAAAGCG 59.524 45.455 0.00 0.00 0.00 4.68
2555 2597 3.465871 TGCCAAAATCTGAACCAAAAGC 58.534 40.909 0.00 0.00 0.00 3.51
2556 2598 3.495753 GCTGCCAAAATCTGAACCAAAAG 59.504 43.478 0.00 0.00 0.00 2.27
2557 2599 3.118482 TGCTGCCAAAATCTGAACCAAAA 60.118 39.130 0.00 0.00 0.00 2.44
2558 2600 2.433604 TGCTGCCAAAATCTGAACCAAA 59.566 40.909 0.00 0.00 0.00 3.28
2559 2601 2.036217 CTGCTGCCAAAATCTGAACCAA 59.964 45.455 0.00 0.00 0.00 3.67
2560 2602 1.614903 CTGCTGCCAAAATCTGAACCA 59.385 47.619 0.00 0.00 0.00 3.67
2561 2603 1.888512 TCTGCTGCCAAAATCTGAACC 59.111 47.619 0.00 0.00 0.00 3.62
2562 2604 3.863142 ATCTGCTGCCAAAATCTGAAC 57.137 42.857 0.00 0.00 0.00 3.18
2563 2605 4.525487 AGAAATCTGCTGCCAAAATCTGAA 59.475 37.500 0.00 0.00 0.00 3.02
2564 2606 4.082408 CAGAAATCTGCTGCCAAAATCTGA 60.082 41.667 13.28 0.00 37.15 3.27
2565 2607 4.174009 CAGAAATCTGCTGCCAAAATCTG 58.826 43.478 0.00 2.49 37.15 2.90
2566 2608 3.194968 CCAGAAATCTGCTGCCAAAATCT 59.805 43.478 4.87 0.00 42.47 2.40
2567 2609 3.194116 TCCAGAAATCTGCTGCCAAAATC 59.806 43.478 4.87 0.00 42.47 2.17
2568 2610 3.167485 TCCAGAAATCTGCTGCCAAAAT 58.833 40.909 4.87 0.00 42.47 1.82
2569 2611 2.596346 TCCAGAAATCTGCTGCCAAAA 58.404 42.857 4.87 0.00 42.47 2.44
2570 2612 2.291209 TCCAGAAATCTGCTGCCAAA 57.709 45.000 4.87 0.00 42.47 3.28
2571 2613 2.291209 TTCCAGAAATCTGCTGCCAA 57.709 45.000 4.87 0.00 42.47 4.52
2572 2614 2.372264 GATTCCAGAAATCTGCTGCCA 58.628 47.619 4.87 0.00 42.47 4.92
2573 2615 1.332997 CGATTCCAGAAATCTGCTGCC 59.667 52.381 4.87 0.00 41.46 4.85
2574 2616 1.332997 CCGATTCCAGAAATCTGCTGC 59.667 52.381 4.87 0.00 41.46 5.25
2575 2617 2.910199 TCCGATTCCAGAAATCTGCTG 58.090 47.619 4.87 0.00 41.46 4.41
2576 2618 3.853355 ATCCGATTCCAGAAATCTGCT 57.147 42.857 4.87 0.00 41.46 4.24
2577 2619 4.024218 CAGAATCCGATTCCAGAAATCTGC 60.024 45.833 16.09 0.00 41.46 4.26
2578 2620 4.024218 GCAGAATCCGATTCCAGAAATCTG 60.024 45.833 16.09 7.57 41.46 2.90
2579 2621 4.133078 GCAGAATCCGATTCCAGAAATCT 58.867 43.478 16.09 0.00 41.46 2.40
2580 2622 4.024218 CAGCAGAATCCGATTCCAGAAATC 60.024 45.833 16.09 0.79 40.13 2.17
2581 2623 3.881688 CAGCAGAATCCGATTCCAGAAAT 59.118 43.478 16.09 0.00 40.13 2.17
2582 2624 3.273434 CAGCAGAATCCGATTCCAGAAA 58.727 45.455 16.09 0.00 40.13 2.52
2583 2625 2.420547 CCAGCAGAATCCGATTCCAGAA 60.421 50.000 16.09 0.00 40.13 3.02
2584 2626 1.139654 CCAGCAGAATCCGATTCCAGA 59.860 52.381 16.09 0.00 40.13 3.86
2585 2627 1.590932 CCAGCAGAATCCGATTCCAG 58.409 55.000 16.09 11.03 40.13 3.86
2586 2628 0.181114 CCCAGCAGAATCCGATTCCA 59.819 55.000 16.09 0.00 40.13 3.53
2587 2629 0.181350 ACCCAGCAGAATCCGATTCC 59.819 55.000 16.09 3.83 40.13 3.01
2588 2630 1.943340 GAACCCAGCAGAATCCGATTC 59.057 52.381 12.51 12.51 39.56 2.52
2589 2631 1.743772 CGAACCCAGCAGAATCCGATT 60.744 52.381 0.00 0.00 0.00 3.34
2590 2632 0.179073 CGAACCCAGCAGAATCCGAT 60.179 55.000 0.00 0.00 0.00 4.18
2591 2633 1.218047 CGAACCCAGCAGAATCCGA 59.782 57.895 0.00 0.00 0.00 4.55
2592 2634 2.464459 GCGAACCCAGCAGAATCCG 61.464 63.158 0.00 0.00 34.19 4.18
2593 2635 2.115291 GGCGAACCCAGCAGAATCC 61.115 63.158 0.00 0.00 36.08 3.01
2594 2636 3.502572 GGCGAACCCAGCAGAATC 58.497 61.111 0.00 0.00 36.08 2.52
2604 2646 0.536460 TCTGAACCAAAGGGCGAACC 60.536 55.000 0.00 0.00 37.90 3.62
2605 2647 1.534729 ATCTGAACCAAAGGGCGAAC 58.465 50.000 0.00 0.00 37.90 3.95
2606 2648 2.159382 GAATCTGAACCAAAGGGCGAA 58.841 47.619 0.00 0.00 37.90 4.70
2607 2649 1.351017 AGAATCTGAACCAAAGGGCGA 59.649 47.619 0.00 0.00 37.90 5.54
2608 2650 1.470098 CAGAATCTGAACCAAAGGGCG 59.530 52.381 3.77 0.00 33.00 6.13
2609 2651 1.203287 GCAGAATCTGAACCAAAGGGC 59.797 52.381 15.38 0.00 33.00 5.19
2610 2652 2.490903 CAGCAGAATCTGAACCAAAGGG 59.509 50.000 15.38 0.00 36.19 3.95
2611 2653 2.094854 GCAGCAGAATCTGAACCAAAGG 60.095 50.000 15.38 0.00 36.19 3.11
2612 2654 2.555325 TGCAGCAGAATCTGAACCAAAG 59.445 45.455 15.38 0.00 36.19 2.77
2613 2655 2.294233 GTGCAGCAGAATCTGAACCAAA 59.706 45.455 15.38 0.00 36.77 3.28
2614 2656 1.881973 GTGCAGCAGAATCTGAACCAA 59.118 47.619 15.38 0.00 36.77 3.67
2615 2657 1.527034 GTGCAGCAGAATCTGAACCA 58.473 50.000 15.38 3.87 36.77 3.67
2616 2658 0.445436 CGTGCAGCAGAATCTGAACC 59.555 55.000 15.38 1.15 39.04 3.62
2617 2659 0.445436 CCGTGCAGCAGAATCTGAAC 59.555 55.000 15.38 5.24 38.89 3.18
2618 2660 1.300971 GCCGTGCAGCAGAATCTGAA 61.301 55.000 15.38 0.00 36.19 3.02
2619 2661 1.742880 GCCGTGCAGCAGAATCTGA 60.743 57.895 15.38 0.00 36.19 3.27
2620 2662 2.036571 TGCCGTGCAGCAGAATCTG 61.037 57.895 5.78 5.78 38.00 2.90
2621 2663 2.348620 TGCCGTGCAGCAGAATCT 59.651 55.556 0.00 0.00 38.00 2.40
2641 2683 5.332707 GTTCAGCTTTTATCAACGGATTCC 58.667 41.667 0.00 0.00 34.89 3.01
2642 2684 5.106317 TGGTTCAGCTTTTATCAACGGATTC 60.106 40.000 0.00 0.00 34.89 2.52
2643 2685 4.764823 TGGTTCAGCTTTTATCAACGGATT 59.235 37.500 0.00 0.00 34.89 3.01
2644 2686 4.331968 TGGTTCAGCTTTTATCAACGGAT 58.668 39.130 0.00 0.00 37.55 4.18
2645 2687 3.745799 TGGTTCAGCTTTTATCAACGGA 58.254 40.909 0.00 0.00 0.00 4.69
2646 2688 4.497473 TTGGTTCAGCTTTTATCAACGG 57.503 40.909 0.00 0.00 0.00 4.44
2647 2689 5.277825 TGTTTGGTTCAGCTTTTATCAACG 58.722 37.500 0.00 0.00 0.00 4.10
2648 2690 5.691754 CCTGTTTGGTTCAGCTTTTATCAAC 59.308 40.000 0.00 0.00 0.00 3.18
2649 2691 5.221422 CCCTGTTTGGTTCAGCTTTTATCAA 60.221 40.000 0.00 0.00 0.00 2.57
2650 2692 4.280677 CCCTGTTTGGTTCAGCTTTTATCA 59.719 41.667 0.00 0.00 0.00 2.15
2651 2693 4.809673 CCCTGTTTGGTTCAGCTTTTATC 58.190 43.478 0.00 0.00 0.00 1.75
2652 2694 3.006859 GCCCTGTTTGGTTCAGCTTTTAT 59.993 43.478 0.00 0.00 0.00 1.40
2653 2695 2.364002 GCCCTGTTTGGTTCAGCTTTTA 59.636 45.455 0.00 0.00 0.00 1.52
2654 2696 1.138859 GCCCTGTTTGGTTCAGCTTTT 59.861 47.619 0.00 0.00 0.00 2.27
2655 2697 0.752658 GCCCTGTTTGGTTCAGCTTT 59.247 50.000 0.00 0.00 0.00 3.51
2656 2698 1.115326 GGCCCTGTTTGGTTCAGCTT 61.115 55.000 0.00 0.00 0.00 3.74
2657 2699 1.531602 GGCCCTGTTTGGTTCAGCT 60.532 57.895 0.00 0.00 0.00 4.24
2658 2700 0.251165 TAGGCCCTGTTTGGTTCAGC 60.251 55.000 0.00 0.00 0.00 4.26
2659 2701 2.162681 CTTAGGCCCTGTTTGGTTCAG 58.837 52.381 0.00 0.00 0.00 3.02
2660 2702 1.497286 ACTTAGGCCCTGTTTGGTTCA 59.503 47.619 0.00 0.00 0.00 3.18
2661 2703 2.287977 ACTTAGGCCCTGTTTGGTTC 57.712 50.000 0.00 0.00 0.00 3.62
2662 2704 2.983898 TCTACTTAGGCCCTGTTTGGTT 59.016 45.455 0.00 0.00 0.00 3.67
2663 2705 2.627933 TCTACTTAGGCCCTGTTTGGT 58.372 47.619 0.00 0.00 0.00 3.67
2664 2706 3.545703 CATCTACTTAGGCCCTGTTTGG 58.454 50.000 0.00 0.00 0.00 3.28
2665 2707 3.545703 CCATCTACTTAGGCCCTGTTTG 58.454 50.000 0.00 0.00 0.00 2.93
2666 2708 2.092375 GCCATCTACTTAGGCCCTGTTT 60.092 50.000 0.00 0.00 42.58 2.83
2667 2709 1.490910 GCCATCTACTTAGGCCCTGTT 59.509 52.381 0.00 0.00 42.58 3.16
2668 2710 1.132500 GCCATCTACTTAGGCCCTGT 58.868 55.000 0.00 0.00 42.58 4.00
2674 2716 5.119694 GGTTGAGAAAGCCATCTACTTAGG 58.880 45.833 0.00 0.00 0.00 2.69
2675 2717 5.734720 TGGTTGAGAAAGCCATCTACTTAG 58.265 41.667 0.00 0.00 0.00 2.18
2676 2718 5.755409 TGGTTGAGAAAGCCATCTACTTA 57.245 39.130 0.00 0.00 0.00 2.24
2677 2719 4.640771 TGGTTGAGAAAGCCATCTACTT 57.359 40.909 0.00 0.00 0.00 2.24
2678 2720 4.851639 ATGGTTGAGAAAGCCATCTACT 57.148 40.909 0.00 0.00 38.52 2.57
2679 2721 5.904362 AAATGGTTGAGAAAGCCATCTAC 57.096 39.130 0.00 0.00 41.68 2.59
2687 2729 7.820648 ACATACAGCTAAAATGGTTGAGAAAG 58.179 34.615 6.96 0.00 0.00 2.62
2707 2749 6.417191 TTGAAAATCAGGCGACTTACATAC 57.583 37.500 0.00 0.00 40.21 2.39
2718 2760 7.390162 TGATTTACCCAAATTTGAAAATCAGGC 59.610 33.333 28.94 17.39 37.07 4.85
2755 2797 7.220683 ACACAAATCTTGACAAAAGAATCAACG 59.779 33.333 0.00 0.00 31.62 4.10
2823 2866 3.522553 CCTTACCCGAGCAAGTCTAAAG 58.477 50.000 0.00 0.00 0.00 1.85
2827 2871 1.192146 TGCCTTACCCGAGCAAGTCT 61.192 55.000 0.00 0.00 32.56 3.24
2934 2978 7.631717 AGCCCAATAGAAATTTCAGACTTAC 57.368 36.000 19.99 5.02 0.00 2.34
2941 2985 5.481473 AGCTTCAAGCCCAATAGAAATTTCA 59.519 36.000 19.99 6.84 43.77 2.69
2942 2986 5.970592 AGCTTCAAGCCCAATAGAAATTTC 58.029 37.500 5.53 10.33 43.77 2.17
2943 2987 6.168389 CAAGCTTCAAGCCCAATAGAAATTT 58.832 36.000 5.53 0.00 43.77 1.82
2944 2988 5.246883 ACAAGCTTCAAGCCCAATAGAAATT 59.753 36.000 5.53 0.00 43.77 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.