Multiple sequence alignment - TraesCS2B01G240800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G240800 chr2B 100.000 5117 0 0 1 5117 244920878 244915762 0.000000e+00 9450.0
1 TraesCS2B01G240800 chr2B 74.656 655 125 23 1138 1779 245794067 245793441 8.510000e-63 252.0
2 TraesCS2B01G240800 chr2D 93.670 2038 70 27 2661 4651 188833907 188831882 0.000000e+00 2994.0
3 TraesCS2B01G240800 chr2D 93.943 1684 63 16 631 2295 188835912 188834249 0.000000e+00 2508.0
4 TraesCS2B01G240800 chr2D 93.116 276 9 3 2392 2664 188834251 188833983 3.710000e-106 396.0
5 TraesCS2B01G240800 chr2D 95.833 192 7 1 4917 5108 59653363 59653173 4.980000e-80 309.0
6 TraesCS2B01G240800 chr2D 75.495 657 128 24 1138 1779 189389543 189388905 1.800000e-74 291.0
7 TraesCS2B01G240800 chr2D 73.810 798 175 27 3217 3996 640043132 640042351 8.390000e-73 285.0
8 TraesCS2B01G240800 chr2D 84.049 163 25 1 2975 3136 189974668 189974506 6.860000e-34 156.0
9 TraesCS2B01G240800 chr2A 91.687 2093 118 24 603 2664 202887605 202885538 0.000000e+00 2850.0
10 TraesCS2B01G240800 chr2A 95.984 1469 52 5 2661 4123 202885462 202883995 0.000000e+00 2379.0
11 TraesCS2B01G240800 chr2A 86.613 493 38 9 4162 4651 202883914 202883447 2.110000e-143 520.0
12 TraesCS2B01G240800 chr2A 77.052 658 116 25 1138 1779 203321775 203321137 3.790000e-91 346.0
13 TraesCS2B01G240800 chr2A 80.090 221 40 3 2918 3136 203720387 203720169 1.470000e-35 161.0
14 TraesCS2B01G240800 chr2A 84.112 107 15 2 3545 3651 203315597 203315701 9.060000e-18 102.0
15 TraesCS2B01G240800 chr6D 85.772 1476 164 26 2661 4125 5479607 5478167 0.000000e+00 1520.0
16 TraesCS2B01G240800 chr6D 84.358 927 135 8 960 1877 5481629 5480704 0.000000e+00 900.0
17 TraesCS2B01G240800 chr6D 84.270 89 7 3 5019 5102 467320188 467320274 4.250000e-11 80.5
18 TraesCS2B01G240800 chr6D 81.443 97 16 2 3548 3643 13276936 13276841 1.530000e-10 78.7
19 TraesCS2B01G240800 chr1B 93.705 556 32 3 10 562 646504522 646505077 0.000000e+00 830.0
20 TraesCS2B01G240800 chr1B 76.007 1092 224 34 2918 3995 123966282 123965215 9.760000e-147 531.0
21 TraesCS2B01G240800 chr1B 76.701 485 97 13 3216 3698 123973985 123973515 6.570000e-64 255.0
22 TraesCS2B01G240800 chr1B 82.018 228 36 5 3773 3996 123973292 123973066 6.760000e-44 189.0
23 TraesCS2B01G240800 chr3B 93.682 554 33 2 11 562 128574270 128574823 0.000000e+00 828.0
24 TraesCS2B01G240800 chr3B 92.349 562 39 4 1 560 16144454 16145013 0.000000e+00 797.0
25 TraesCS2B01G240800 chr3B 92.049 566 43 2 1 564 130596444 130597009 0.000000e+00 795.0
26 TraesCS2B01G240800 chr3B 94.416 197 7 2 4912 5108 666795856 666795664 2.990000e-77 300.0
27 TraesCS2B01G240800 chr3B 81.333 150 23 4 4359 4506 5076838 5076984 3.240000e-22 117.0
28 TraesCS2B01G240800 chr3B 77.619 210 31 9 4359 4566 4221394 4221589 4.190000e-21 113.0
29 TraesCS2B01G240800 chr7B 93.060 562 36 3 1 560 638418574 638418014 0.000000e+00 819.0
30 TraesCS2B01G240800 chr7B 92.432 555 40 2 10 562 371043032 371042478 0.000000e+00 791.0
31 TraesCS2B01G240800 chr7B 97.778 90 1 1 4947 5036 34059271 34059183 2.470000e-33 154.0
32 TraesCS2B01G240800 chr4B 92.806 556 38 2 10 563 611398274 611397719 0.000000e+00 804.0
33 TraesCS2B01G240800 chr4B 97.475 198 4 1 4911 5108 307894077 307893881 2.280000e-88 337.0
34 TraesCS2B01G240800 chr4B 96.023 176 6 1 4930 5105 2735676 2735850 8.390000e-73 285.0
35 TraesCS2B01G240800 chr5A 92.806 556 37 3 10 563 600179135 600179689 0.000000e+00 802.0
36 TraesCS2B01G240800 chr5A 92.349 562 35 3 1 560 504235049 504234494 0.000000e+00 793.0
37 TraesCS2B01G240800 chr5A 81.955 133 21 3 4376 4507 44363822 44363952 5.420000e-20 110.0
38 TraesCS2B01G240800 chr1A 74.536 1292 263 49 2706 3976 96464130 96465376 2.130000e-138 503.0
39 TraesCS2B01G240800 chr1A 75.911 768 160 23 3241 3996 96472451 96473205 2.250000e-98 370.0
40 TraesCS2B01G240800 chr6B 96.354 192 7 0 4917 5108 705288002 705287811 2.970000e-82 316.0
41 TraesCS2B01G240800 chr6B 82.353 119 18 3 4367 4484 703868347 703868231 3.260000e-17 100.0
42 TraesCS2B01G240800 chr7A 85.714 189 16 7 4917 5102 530520096 530519916 6.760000e-44 189.0
43 TraesCS2B01G240800 chr7A 83.607 183 12 7 4929 5111 266990488 266990324 6.860000e-34 156.0
44 TraesCS2B01G240800 chr1D 89.524 105 6 2 5004 5108 6827457 6827358 1.500000e-25 128.0
45 TraesCS2B01G240800 chr3A 85.047 107 14 2 4379 4484 736632918 736633023 1.950000e-19 108.0
46 TraesCS2B01G240800 chr5D 82.540 126 17 5 4374 4498 522113277 522113398 7.010000e-19 106.0
47 TraesCS2B01G240800 chr7D 82.906 117 18 2 4372 4487 509568682 509568567 2.520000e-18 104.0
48 TraesCS2B01G240800 chr6A 83.696 92 8 7 5014 5102 613773397 613773484 4.250000e-11 80.5
49 TraesCS2B01G240800 chrUn 80.612 98 16 3 3548 3644 71413437 71413342 7.110000e-09 73.1
50 TraesCS2B01G240800 chrUn 80.612 98 16 3 3548 3644 71472498 71472403 7.110000e-09 73.1
51 TraesCS2B01G240800 chrUn 80.612 98 16 3 3548 3644 372039492 372039397 7.110000e-09 73.1
52 TraesCS2B01G240800 chrUn 80.612 98 16 3 3548 3644 372064469 372064564 7.110000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G240800 chr2B 244915762 244920878 5116 True 9450.000000 9450 100.000000 1 5117 1 chr2B.!!$R1 5116
1 TraesCS2B01G240800 chr2B 245793441 245794067 626 True 252.000000 252 74.656000 1138 1779 1 chr2B.!!$R2 641
2 TraesCS2B01G240800 chr2D 188831882 188835912 4030 True 1966.000000 2994 93.576333 631 4651 3 chr2D.!!$R5 4020
3 TraesCS2B01G240800 chr2D 189388905 189389543 638 True 291.000000 291 75.495000 1138 1779 1 chr2D.!!$R2 641
4 TraesCS2B01G240800 chr2D 640042351 640043132 781 True 285.000000 285 73.810000 3217 3996 1 chr2D.!!$R4 779
5 TraesCS2B01G240800 chr2A 202883447 202887605 4158 True 1916.333333 2850 91.428000 603 4651 3 chr2A.!!$R3 4048
6 TraesCS2B01G240800 chr2A 203321137 203321775 638 True 346.000000 346 77.052000 1138 1779 1 chr2A.!!$R1 641
7 TraesCS2B01G240800 chr6D 5478167 5481629 3462 True 1210.000000 1520 85.065000 960 4125 2 chr6D.!!$R2 3165
8 TraesCS2B01G240800 chr1B 646504522 646505077 555 False 830.000000 830 93.705000 10 562 1 chr1B.!!$F1 552
9 TraesCS2B01G240800 chr1B 123965215 123966282 1067 True 531.000000 531 76.007000 2918 3995 1 chr1B.!!$R1 1077
10 TraesCS2B01G240800 chr1B 123973066 123973985 919 True 222.000000 255 79.359500 3216 3996 2 chr1B.!!$R2 780
11 TraesCS2B01G240800 chr3B 128574270 128574823 553 False 828.000000 828 93.682000 11 562 1 chr3B.!!$F4 551
12 TraesCS2B01G240800 chr3B 16144454 16145013 559 False 797.000000 797 92.349000 1 560 1 chr3B.!!$F3 559
13 TraesCS2B01G240800 chr3B 130596444 130597009 565 False 795.000000 795 92.049000 1 564 1 chr3B.!!$F5 563
14 TraesCS2B01G240800 chr7B 638418014 638418574 560 True 819.000000 819 93.060000 1 560 1 chr7B.!!$R3 559
15 TraesCS2B01G240800 chr7B 371042478 371043032 554 True 791.000000 791 92.432000 10 562 1 chr7B.!!$R2 552
16 TraesCS2B01G240800 chr4B 611397719 611398274 555 True 804.000000 804 92.806000 10 563 1 chr4B.!!$R2 553
17 TraesCS2B01G240800 chr5A 600179135 600179689 554 False 802.000000 802 92.806000 10 563 1 chr5A.!!$F2 553
18 TraesCS2B01G240800 chr5A 504234494 504235049 555 True 793.000000 793 92.349000 1 560 1 chr5A.!!$R1 559
19 TraesCS2B01G240800 chr1A 96464130 96465376 1246 False 503.000000 503 74.536000 2706 3976 1 chr1A.!!$F1 1270
20 TraesCS2B01G240800 chr1A 96472451 96473205 754 False 370.000000 370 75.911000 3241 3996 1 chr1A.!!$F2 755

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
565 569 0.035343 GGTGGAGTTGGCCTTAGGTC 60.035 60.0 3.32 0.0 0.0 3.85 F
566 570 0.391263 GTGGAGTTGGCCTTAGGTCG 60.391 60.0 3.32 0.0 0.0 4.79 F
1428 1467 0.668535 GCTTCTCCAACCGCAACTTT 59.331 50.0 0.00 0.0 0.0 2.66 F
1810 1864 0.163146 GCAACTTCCGCAGTTCGTAC 59.837 55.0 0.00 0.0 44.6 3.67 F
3559 4143 0.461870 GTCACAGCGGATACATGGCA 60.462 55.0 0.00 0.0 0.0 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1428 1467 0.244721 TGTAGTCGTCGTCGAGGAGA 59.755 55.0 17.34 6.63 46.96 3.71 R
1794 1848 0.956633 TCTGTACGAACTGCGGAAGT 59.043 50.0 0.00 0.00 46.49 3.01 R
3097 3621 0.245539 CAAGGCTTCTGTTGGGCATG 59.754 55.0 0.00 0.00 0.00 4.06 R
3762 4497 0.592637 GCACCAAATTTTGCAAGGGC 59.407 50.0 9.48 0.00 38.68 5.19 R
5038 5823 0.025256 GAACGAACGAAACGTGCACA 59.975 50.0 18.64 0.00 43.16 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 3.626680 CTTCTTCACGGAGCCGCGA 62.627 63.158 8.23 1.57 44.19 5.87
116 117 2.594592 GGTCGTGCTTGCCCTTGT 60.595 61.111 0.00 0.00 0.00 3.16
268 270 3.556423 GCTTCCCACTTAAAGAAGGACGA 60.556 47.826 0.00 0.00 37.95 4.20
269 271 4.833390 CTTCCCACTTAAAGAAGGACGAT 58.167 43.478 0.00 0.00 36.95 3.73
284 286 2.178521 GATGACCGCTCGACGTGT 59.821 61.111 0.00 4.64 41.42 4.49
299 301 1.826340 CGTGTGGATGACAGGTGGGA 61.826 60.000 0.00 0.00 35.99 4.37
472 475 3.400188 GGACAGAATGGGTCCGGT 58.600 61.111 0.00 0.00 44.80 5.28
524 528 4.234574 CCTTTTGTTCCAAACGAATAGGC 58.765 43.478 0.00 0.00 34.85 3.93
564 568 1.838073 CGGTGGAGTTGGCCTTAGGT 61.838 60.000 3.32 0.00 0.00 3.08
565 569 0.035343 GGTGGAGTTGGCCTTAGGTC 60.035 60.000 3.32 0.00 0.00 3.85
566 570 0.391263 GTGGAGTTGGCCTTAGGTCG 60.391 60.000 3.32 0.00 0.00 4.79
567 571 1.449778 GGAGTTGGCCTTAGGTCGC 60.450 63.158 3.32 0.00 0.00 5.19
568 572 1.810030 GAGTTGGCCTTAGGTCGCG 60.810 63.158 3.32 0.00 0.00 5.87
569 573 3.497031 GTTGGCCTTAGGTCGCGC 61.497 66.667 3.32 0.00 0.00 6.86
585 589 3.825611 GCGGCGCATGGTGGAATT 61.826 61.111 29.21 0.00 0.00 2.17
586 590 2.102749 CGGCGCATGGTGGAATTG 59.897 61.111 10.83 0.00 0.00 2.32
587 591 2.495866 GGCGCATGGTGGAATTGG 59.504 61.111 10.83 0.00 0.00 3.16
588 592 2.350458 GGCGCATGGTGGAATTGGT 61.350 57.895 10.83 0.00 0.00 3.67
589 593 1.139520 GCGCATGGTGGAATTGGTC 59.860 57.895 0.30 0.00 0.00 4.02
590 594 1.594194 GCGCATGGTGGAATTGGTCA 61.594 55.000 0.30 0.00 0.00 4.02
591 595 0.887247 CGCATGGTGGAATTGGTCAA 59.113 50.000 0.00 0.00 0.00 3.18
592 596 1.271934 CGCATGGTGGAATTGGTCAAA 59.728 47.619 0.00 0.00 0.00 2.69
593 597 2.094078 CGCATGGTGGAATTGGTCAAAT 60.094 45.455 0.00 0.00 0.00 2.32
594 598 3.264104 GCATGGTGGAATTGGTCAAATG 58.736 45.455 0.00 0.00 0.00 2.32
595 599 3.055963 GCATGGTGGAATTGGTCAAATGA 60.056 43.478 0.00 0.00 0.00 2.57
596 600 4.751060 CATGGTGGAATTGGTCAAATGAG 58.249 43.478 0.00 0.00 0.00 2.90
597 601 3.164268 TGGTGGAATTGGTCAAATGAGG 58.836 45.455 0.00 0.00 0.00 3.86
598 602 3.165071 GGTGGAATTGGTCAAATGAGGT 58.835 45.455 0.00 0.00 0.00 3.85
599 603 3.056607 GGTGGAATTGGTCAAATGAGGTG 60.057 47.826 0.00 0.00 0.00 4.00
600 604 3.056607 GTGGAATTGGTCAAATGAGGTGG 60.057 47.826 0.00 0.00 0.00 4.61
601 605 2.094026 GGAATTGGTCAAATGAGGTGGC 60.094 50.000 0.00 0.00 0.00 5.01
628 632 2.031258 TTTTCTGCGTCAGGTGTTCA 57.969 45.000 6.95 0.00 31.51 3.18
669 677 7.004555 ACTACTGGTCAGTGTCAATATCAAA 57.995 36.000 13.32 0.00 42.52 2.69
670 678 6.874134 ACTACTGGTCAGTGTCAATATCAAAC 59.126 38.462 13.32 0.00 42.52 2.93
671 679 5.620206 ACTGGTCAGTGTCAATATCAAACA 58.380 37.500 2.46 0.00 40.75 2.83
672 680 5.702670 ACTGGTCAGTGTCAATATCAAACAG 59.297 40.000 2.46 0.00 40.75 3.16
674 682 4.396166 GGTCAGTGTCAATATCAAACAGGG 59.604 45.833 0.00 0.00 0.00 4.45
675 683 5.245531 GTCAGTGTCAATATCAAACAGGGA 58.754 41.667 0.00 0.00 0.00 4.20
678 686 6.206634 TCAGTGTCAATATCAAACAGGGAAAC 59.793 38.462 0.00 0.00 0.00 2.78
681 689 5.830457 TGTCAATATCAAACAGGGAAACACA 59.170 36.000 0.00 0.00 0.00 3.72
702 713 5.563751 CACATGGAGAAACGTCAAATAAACG 59.436 40.000 0.00 0.00 45.37 3.60
725 739 6.481644 ACGTACTGTATAAGTAGTGCTAGGAC 59.518 42.308 6.22 6.22 42.15 3.85
726 740 6.481313 CGTACTGTATAAGTAGTGCTAGGACA 59.519 42.308 17.34 0.00 42.15 4.02
742 756 4.119442 AGGACAGTTCGCAATTACGTAT 57.881 40.909 0.00 0.00 0.00 3.06
743 757 4.501071 AGGACAGTTCGCAATTACGTATT 58.499 39.130 0.00 0.00 0.00 1.89
744 758 4.328983 AGGACAGTTCGCAATTACGTATTG 59.671 41.667 0.00 4.87 45.30 1.90
745 759 4.092383 GGACAGTTCGCAATTACGTATTGT 59.908 41.667 5.70 5.70 44.52 2.71
746 760 5.289193 GGACAGTTCGCAATTACGTATTGTA 59.711 40.000 5.96 5.73 44.52 2.41
769 783 9.878667 TGTATTCGGTTACAAATTCTTCTGATA 57.121 29.630 0.00 0.00 0.00 2.15
869 888 3.641648 GCAGTCAACAAATGCTTTGCTA 58.358 40.909 8.09 0.00 44.39 3.49
878 897 1.890876 ATGCTTTGCTACGGTCAACA 58.109 45.000 0.00 0.00 0.00 3.33
879 898 1.669604 TGCTTTGCTACGGTCAACAA 58.330 45.000 0.00 0.00 0.00 2.83
911 930 0.930310 CTGCCAATGATACACCGACG 59.070 55.000 0.00 0.00 0.00 5.12
939 958 2.956333 CGAACAACCCCTTCTCCTTTTT 59.044 45.455 0.00 0.00 0.00 1.94
940 959 3.243401 CGAACAACCCCTTCTCCTTTTTG 60.243 47.826 0.00 0.00 0.00 2.44
941 960 3.680777 ACAACCCCTTCTCCTTTTTGA 57.319 42.857 0.00 0.00 0.00 2.69
944 963 4.968719 ACAACCCCTTCTCCTTTTTGATTT 59.031 37.500 0.00 0.00 0.00 2.17
946 965 4.160329 ACCCCTTCTCCTTTTTGATTTCC 58.840 43.478 0.00 0.00 0.00 3.13
1063 1102 2.993853 CTGCCACCTTCCTCCTCC 59.006 66.667 0.00 0.00 0.00 4.30
1072 1111 2.231540 CTTCCTCCTCCCCGTCCTCT 62.232 65.000 0.00 0.00 0.00 3.69
1134 1173 2.122413 ATCTGCGGGCCCTATCCA 60.122 61.111 22.43 10.55 0.00 3.41
1428 1467 0.668535 GCTTCTCCAACCGCAACTTT 59.331 50.000 0.00 0.00 0.00 2.66
1624 1678 0.742990 CCCCAAGATTTACGCGCTGA 60.743 55.000 5.73 0.00 0.00 4.26
1794 1848 4.752879 GGCCGTCCGCTAGTGCAA 62.753 66.667 0.00 0.00 39.64 4.08
1810 1864 0.163146 GCAACTTCCGCAGTTCGTAC 59.837 55.000 0.00 0.00 44.60 3.67
1981 2081 7.436118 AGAACATGCAACAACAAATGATTACT 58.564 30.769 0.00 0.00 0.00 2.24
2145 2279 3.821600 GTCAGAGTACTTGAGGTGTCAGA 59.178 47.826 0.00 0.00 32.98 3.27
2166 2300 2.365617 ACATAGAATTGCTCGACCGGAT 59.634 45.455 9.46 0.00 0.00 4.18
2269 2603 3.947910 ACAGACAATCTTGCAAATGGG 57.052 42.857 0.00 0.00 0.00 4.00
2292 2626 2.938451 TGTGTGCTCTGAAACTCACAAG 59.062 45.455 10.84 0.00 40.57 3.16
2304 2638 7.773224 TCTGAAACTCACAAGGTTTTCTTATGA 59.227 33.333 0.00 0.00 36.64 2.15
2329 2663 9.678941 GAAAAATCCTACTACAAAGTTTTCCAG 57.321 33.333 0.00 0.00 37.15 3.86
2330 2664 6.819397 AATCCTACTACAAAGTTTTCCAGC 57.181 37.500 0.00 0.00 37.15 4.85
2331 2665 5.298989 TCCTACTACAAAGTTTTCCAGCA 57.701 39.130 0.00 0.00 37.15 4.41
2332 2666 5.686753 TCCTACTACAAAGTTTTCCAGCAA 58.313 37.500 0.00 0.00 37.15 3.91
2333 2667 5.529800 TCCTACTACAAAGTTTTCCAGCAAC 59.470 40.000 0.00 0.00 37.15 4.17
2342 2676 9.019656 ACAAAGTTTTCCAGCAACATATATGTA 57.980 29.630 18.56 0.00 40.80 2.29
2344 2678 7.568199 AGTTTTCCAGCAACATATATGTACC 57.432 36.000 18.56 12.14 40.80 3.34
2352 2686 7.095060 CCAGCAACATATATGTACCACAAGATC 60.095 40.741 18.56 0.00 40.80 2.75
2355 2689 6.037786 ACATATATGTACCACAAGATCCCG 57.962 41.667 16.85 0.00 39.68 5.14
2356 2690 5.778241 ACATATATGTACCACAAGATCCCGA 59.222 40.000 16.85 0.00 39.68 5.14
2359 2693 3.260475 TGTACCACAAGATCCCGATTG 57.740 47.619 0.00 0.00 0.00 2.67
2361 2695 2.403252 ACCACAAGATCCCGATTGAC 57.597 50.000 0.00 0.00 0.00 3.18
2373 2707 7.144000 AGATCCCGATTGACGTTATAACTAAC 58.856 38.462 13.56 5.55 40.78 2.34
2377 2711 6.532657 CCCGATTGACGTTATAACTAACAAGT 59.467 38.462 13.56 2.96 37.65 3.16
2378 2712 7.701924 CCCGATTGACGTTATAACTAACAAGTA 59.298 37.037 13.56 0.00 37.65 2.24
2468 2899 3.273434 TCTGATGCCTACAATTGCTGTC 58.727 45.455 5.05 0.00 39.64 3.51
2481 2912 1.985473 TGCTGTCATATTGGCCATCC 58.015 50.000 6.09 0.00 0.00 3.51
2486 2917 2.244510 TGTCATATTGGCCATCCCTGTT 59.755 45.455 6.09 0.00 0.00 3.16
2527 2958 4.488770 AGGAAGAGAAGACCAGAAGAAGT 58.511 43.478 0.00 0.00 0.00 3.01
2846 3366 8.989980 GGTACAGAAATACACCATTTATAGCTC 58.010 37.037 0.00 0.00 36.96 4.09
2856 3376 8.863872 ACACCATTTATAGCTCAAGTTTTAGT 57.136 30.769 0.00 0.00 0.00 2.24
3055 3579 3.817647 AGAATCTTGTGAGACTTGTTGGC 59.182 43.478 0.00 0.00 33.99 4.52
3241 3799 6.135290 TGTTTGAACCACAGATTCTGAAAG 57.865 37.500 20.33 10.08 35.18 2.62
3559 4143 0.461870 GTCACAGCGGATACATGGCA 60.462 55.000 0.00 0.00 0.00 4.92
3686 4270 1.073964 CACTGAGCAAGACGTGGATG 58.926 55.000 0.00 0.00 0.00 3.51
3712 4298 3.181451 TGAATCTTGTGAGCACCTGAAGT 60.181 43.478 0.00 0.00 0.00 3.01
3721 4307 1.002888 AGCACCTGAAGTCTGTCCATG 59.997 52.381 0.00 0.00 0.00 3.66
4083 4821 6.808008 AATTCAACTGTGATGTCTTCGAAT 57.192 33.333 0.00 0.00 32.48 3.34
4125 4885 1.205655 TCGCCAAGATGAGTCCTGAAG 59.794 52.381 0.00 0.00 0.00 3.02
4128 4888 2.877300 GCCAAGATGAGTCCTGAAGCAA 60.877 50.000 0.00 0.00 0.00 3.91
4130 4890 2.746362 CAAGATGAGTCCTGAAGCAACC 59.254 50.000 0.00 0.00 0.00 3.77
4150 4911 4.747810 ACCGTGTATAGTTTTCTTACGGG 58.252 43.478 15.97 1.79 0.00 5.28
4152 4913 5.127682 ACCGTGTATAGTTTTCTTACGGGAT 59.872 40.000 15.97 0.00 0.00 3.85
4194 4975 0.980231 AGGAAGAGGCCCTGCTGTAG 60.980 60.000 0.00 0.00 31.66 2.74
4195 4976 1.268283 GGAAGAGGCCCTGCTGTAGT 61.268 60.000 0.00 0.00 0.00 2.73
4196 4977 0.107945 GAAGAGGCCCTGCTGTAGTG 60.108 60.000 0.00 0.00 0.00 2.74
4197 4978 2.124942 GAGGCCCTGCTGTAGTGC 60.125 66.667 0.00 0.00 0.00 4.40
4198 4979 2.608988 AGGCCCTGCTGTAGTGCT 60.609 61.111 0.00 0.00 0.00 4.40
4199 4980 2.437359 GGCCCTGCTGTAGTGCTG 60.437 66.667 0.00 0.00 0.00 4.41
4200 4981 2.348998 GCCCTGCTGTAGTGCTGT 59.651 61.111 0.00 0.00 0.00 4.40
4201 4982 1.596934 GCCCTGCTGTAGTGCTGTA 59.403 57.895 0.00 0.00 0.00 2.74
4220 5001 5.686397 GCTGTATCGGTGTCTATTACTGAAC 59.314 44.000 0.00 0.00 37.03 3.18
4314 5095 4.319177 ACAGAAGTCATGGTAAAGCTCAC 58.681 43.478 0.00 0.00 0.00 3.51
4345 5126 7.826252 AGCGTGATAGATTATAAAGAATGCCAT 59.174 33.333 0.00 0.00 0.00 4.40
4374 5155 5.124936 GCTGTTCAACTAAATTATTCCCCGT 59.875 40.000 0.00 0.00 0.00 5.28
4427 5208 6.537453 ACTGTAGTCTGTGATTTATCTGCT 57.463 37.500 0.00 0.00 0.00 4.24
4554 5337 6.627395 TGGTATAAGTCAATAAAATGCGGG 57.373 37.500 0.00 0.00 0.00 6.13
4568 5351 0.038892 TGCGGGACAGTTAAGACGTC 60.039 55.000 7.70 7.70 0.00 4.34
4575 5358 3.988517 GGACAGTTAAGACGTCTTCAAGG 59.011 47.826 32.86 22.16 37.40 3.61
4581 5364 6.258068 CAGTTAAGACGTCTTCAAGGAAAACT 59.742 38.462 32.86 27.82 37.40 2.66
4585 5368 4.100498 AGACGTCTTCAAGGAAAACTGGTA 59.900 41.667 13.58 0.00 0.00 3.25
4590 5373 6.471198 CGTCTTCAAGGAAAACTGGTAAAAAC 59.529 38.462 0.00 0.00 0.00 2.43
4592 5375 6.437793 TCTTCAAGGAAAACTGGTAAAAACCA 59.562 34.615 0.00 0.00 38.25 3.67
4602 5387 3.223435 TGGTAAAAACCAGCGATGGAAA 58.777 40.909 29.47 3.28 34.33 3.13
4629 5414 2.234300 TCAAAACGAAGAGAAGGCGT 57.766 45.000 0.00 0.00 40.35 5.68
4631 5416 1.597663 CAAAACGAAGAGAAGGCGTGT 59.402 47.619 0.00 0.00 38.39 4.49
4639 5424 3.678056 AGAGAAGGCGTGTGAACATAA 57.322 42.857 0.00 0.00 0.00 1.90
4646 5431 4.638304 AGGCGTGTGAACATAAGTAAAGT 58.362 39.130 0.00 0.00 0.00 2.66
4651 5436 6.356190 GCGTGTGAACATAAGTAAAGTTGAAC 59.644 38.462 0.00 0.00 0.00 3.18
4652 5437 6.568601 CGTGTGAACATAAGTAAAGTTGAACG 59.431 38.462 0.00 0.00 0.00 3.95
4653 5438 7.515528 CGTGTGAACATAAGTAAAGTTGAACGA 60.516 37.037 0.00 0.00 30.24 3.85
4654 5439 7.581600 GTGTGAACATAAGTAAAGTTGAACGAC 59.418 37.037 0.00 0.00 0.00 4.34
4655 5440 6.784227 GTGAACATAAGTAAAGTTGAACGACG 59.216 38.462 0.00 0.00 0.00 5.12
4656 5441 5.260027 ACATAAGTAAAGTTGAACGACGC 57.740 39.130 0.00 0.00 0.00 5.19
4657 5442 2.916735 AAGTAAAGTTGAACGACGCG 57.083 45.000 3.53 3.53 0.00 6.01
4658 5443 0.505655 AGTAAAGTTGAACGACGCGC 59.494 50.000 5.73 0.00 0.00 6.86
4659 5444 0.230260 GTAAAGTTGAACGACGCGCA 59.770 50.000 5.73 0.00 0.00 6.09
4660 5445 1.136446 GTAAAGTTGAACGACGCGCAT 60.136 47.619 5.73 0.00 0.00 4.73
4661 5446 0.306533 AAAGTTGAACGACGCGCATT 59.693 45.000 5.73 0.00 0.00 3.56
4662 5447 0.110823 AAGTTGAACGACGCGCATTC 60.111 50.000 5.73 8.42 0.00 2.67
4663 5448 0.944311 AGTTGAACGACGCGCATTCT 60.944 50.000 5.73 0.00 0.00 2.40
4664 5449 0.785708 GTTGAACGACGCGCATTCTG 60.786 55.000 5.73 2.48 0.00 3.02
4665 5450 2.276058 GAACGACGCGCATTCTGC 60.276 61.111 5.73 0.00 40.69 4.26
4666 5451 3.702334 GAACGACGCGCATTCTGCC 62.702 63.158 5.73 0.00 41.12 4.85
4667 5452 4.742201 ACGACGCGCATTCTGCCT 62.742 61.111 5.73 0.00 41.12 4.75
4668 5453 4.214383 CGACGCGCATTCTGCCTG 62.214 66.667 5.73 0.00 41.12 4.85
4669 5454 2.815211 GACGCGCATTCTGCCTGA 60.815 61.111 5.73 0.00 41.12 3.86
4670 5455 3.088500 GACGCGCATTCTGCCTGAC 62.089 63.158 5.73 0.00 41.12 3.51
4671 5456 3.120385 CGCGCATTCTGCCTGACA 61.120 61.111 8.75 0.00 41.12 3.58
4672 5457 2.679934 CGCGCATTCTGCCTGACAA 61.680 57.895 8.75 0.00 41.12 3.18
4673 5458 1.580942 GCGCATTCTGCCTGACAAA 59.419 52.632 0.30 0.00 41.12 2.83
4674 5459 0.039256 GCGCATTCTGCCTGACAAAA 60.039 50.000 0.30 0.00 41.12 2.44
4675 5460 1.602668 GCGCATTCTGCCTGACAAAAA 60.603 47.619 0.30 0.00 41.12 1.94
4715 5500 9.653516 ATTTATCAAGTAAGGAGAGAGAGATGA 57.346 33.333 0.00 0.00 0.00 2.92
4716 5501 8.690203 TTATCAAGTAAGGAGAGAGAGATGAG 57.310 38.462 0.00 0.00 0.00 2.90
4717 5502 5.445069 TCAAGTAAGGAGAGAGAGATGAGG 58.555 45.833 0.00 0.00 0.00 3.86
4718 5503 4.453480 AGTAAGGAGAGAGAGATGAGGG 57.547 50.000 0.00 0.00 0.00 4.30
4719 5504 3.791545 AGTAAGGAGAGAGAGATGAGGGT 59.208 47.826 0.00 0.00 0.00 4.34
4720 5505 2.754012 AGGAGAGAGAGATGAGGGTG 57.246 55.000 0.00 0.00 0.00 4.61
4721 5506 1.039856 GGAGAGAGAGATGAGGGTGC 58.960 60.000 0.00 0.00 0.00 5.01
4722 5507 1.687682 GGAGAGAGAGATGAGGGTGCA 60.688 57.143 0.00 0.00 0.00 4.57
4723 5508 2.106566 GAGAGAGAGATGAGGGTGCAA 58.893 52.381 0.00 0.00 0.00 4.08
4724 5509 2.101249 GAGAGAGAGATGAGGGTGCAAG 59.899 54.545 0.00 0.00 0.00 4.01
4725 5510 0.540923 AGAGAGATGAGGGTGCAAGC 59.459 55.000 0.00 0.00 0.00 4.01
4726 5511 0.540923 GAGAGATGAGGGTGCAAGCT 59.459 55.000 0.00 0.00 0.00 3.74
4727 5512 0.990374 AGAGATGAGGGTGCAAGCTT 59.010 50.000 0.00 0.00 0.00 3.74
4728 5513 1.353694 AGAGATGAGGGTGCAAGCTTT 59.646 47.619 0.00 0.00 0.00 3.51
4729 5514 2.165998 GAGATGAGGGTGCAAGCTTTT 58.834 47.619 0.00 0.00 0.00 2.27
4730 5515 2.560105 GAGATGAGGGTGCAAGCTTTTT 59.440 45.455 0.00 0.00 0.00 1.94
4731 5516 2.560105 AGATGAGGGTGCAAGCTTTTTC 59.440 45.455 0.00 0.00 0.00 2.29
4732 5517 2.071778 TGAGGGTGCAAGCTTTTTCT 57.928 45.000 0.00 0.00 0.00 2.52
4733 5518 3.222173 TGAGGGTGCAAGCTTTTTCTA 57.778 42.857 0.00 0.00 0.00 2.10
4734 5519 3.149196 TGAGGGTGCAAGCTTTTTCTAG 58.851 45.455 0.00 0.00 0.00 2.43
4735 5520 3.149981 GAGGGTGCAAGCTTTTTCTAGT 58.850 45.455 0.00 0.00 0.00 2.57
4736 5521 3.149981 AGGGTGCAAGCTTTTTCTAGTC 58.850 45.455 0.00 0.00 0.00 2.59
4737 5522 3.149981 GGGTGCAAGCTTTTTCTAGTCT 58.850 45.455 0.00 0.00 0.00 3.24
4738 5523 3.189495 GGGTGCAAGCTTTTTCTAGTCTC 59.811 47.826 0.00 0.00 0.00 3.36
4739 5524 3.120511 GGTGCAAGCTTTTTCTAGTCTCG 60.121 47.826 0.00 0.00 0.00 4.04
4740 5525 3.495001 GTGCAAGCTTTTTCTAGTCTCGT 59.505 43.478 0.00 0.00 0.00 4.18
4741 5526 4.684703 GTGCAAGCTTTTTCTAGTCTCGTA 59.315 41.667 0.00 0.00 0.00 3.43
4742 5527 5.176958 GTGCAAGCTTTTTCTAGTCTCGTAA 59.823 40.000 0.00 0.00 0.00 3.18
4743 5528 5.756347 TGCAAGCTTTTTCTAGTCTCGTAAA 59.244 36.000 0.00 0.00 0.00 2.01
4744 5529 6.072098 GCAAGCTTTTTCTAGTCTCGTAAAC 58.928 40.000 0.00 0.00 0.00 2.01
4745 5530 6.591261 CAAGCTTTTTCTAGTCTCGTAAACC 58.409 40.000 0.00 0.00 0.00 3.27
4746 5531 6.099159 AGCTTTTTCTAGTCTCGTAAACCT 57.901 37.500 0.00 0.00 0.00 3.50
4747 5532 7.224522 AGCTTTTTCTAGTCTCGTAAACCTA 57.775 36.000 0.00 0.00 0.00 3.08
4748 5533 7.664758 AGCTTTTTCTAGTCTCGTAAACCTAA 58.335 34.615 0.00 0.00 0.00 2.69
4749 5534 7.598118 AGCTTTTTCTAGTCTCGTAAACCTAAC 59.402 37.037 0.00 0.00 0.00 2.34
4750 5535 7.383300 GCTTTTTCTAGTCTCGTAAACCTAACA 59.617 37.037 0.00 0.00 0.00 2.41
4751 5536 9.252962 CTTTTTCTAGTCTCGTAAACCTAACAA 57.747 33.333 0.00 0.00 0.00 2.83
4752 5537 8.579682 TTTTCTAGTCTCGTAAACCTAACAAC 57.420 34.615 0.00 0.00 0.00 3.32
4753 5538 7.516198 TTCTAGTCTCGTAAACCTAACAACT 57.484 36.000 0.00 0.00 0.00 3.16
4754 5539 8.621532 TTCTAGTCTCGTAAACCTAACAACTA 57.378 34.615 0.00 0.00 0.00 2.24
4755 5540 8.798859 TCTAGTCTCGTAAACCTAACAACTAT 57.201 34.615 0.00 0.00 0.00 2.12
4756 5541 8.671921 TCTAGTCTCGTAAACCTAACAACTATG 58.328 37.037 0.00 0.00 0.00 2.23
4757 5542 7.224522 AGTCTCGTAAACCTAACAACTATGT 57.775 36.000 0.00 0.00 43.14 2.29
4758 5543 7.088905 AGTCTCGTAAACCTAACAACTATGTG 58.911 38.462 0.00 0.00 40.46 3.21
4759 5544 7.040201 AGTCTCGTAAACCTAACAACTATGTGA 60.040 37.037 0.00 0.00 40.46 3.58
4760 5545 7.758528 GTCTCGTAAACCTAACAACTATGTGAT 59.241 37.037 0.00 0.00 40.46 3.06
4761 5546 8.308931 TCTCGTAAACCTAACAACTATGTGATT 58.691 33.333 0.00 0.00 40.46 2.57
4762 5547 8.836268 TCGTAAACCTAACAACTATGTGATTT 57.164 30.769 0.00 0.00 40.46 2.17
4763 5548 9.275398 TCGTAAACCTAACAACTATGTGATTTT 57.725 29.630 0.00 0.00 40.46 1.82
4764 5549 9.537848 CGTAAACCTAACAACTATGTGATTTTC 57.462 33.333 0.00 0.00 40.46 2.29
4765 5550 9.836076 GTAAACCTAACAACTATGTGATTTTCC 57.164 33.333 0.00 0.00 40.46 3.13
4766 5551 7.462571 AACCTAACAACTATGTGATTTTCCC 57.537 36.000 0.00 0.00 40.46 3.97
4767 5552 5.646360 ACCTAACAACTATGTGATTTTCCCG 59.354 40.000 0.00 0.00 40.46 5.14
4768 5553 5.065988 CCTAACAACTATGTGATTTTCCCGG 59.934 44.000 0.00 0.00 40.46 5.73
4769 5554 4.028993 ACAACTATGTGATTTTCCCGGT 57.971 40.909 0.00 0.00 38.69 5.28
4770 5555 4.403734 ACAACTATGTGATTTTCCCGGTT 58.596 39.130 0.00 0.00 38.69 4.44
4771 5556 4.217550 ACAACTATGTGATTTTCCCGGTTG 59.782 41.667 0.00 0.00 38.69 3.77
4772 5557 2.752903 ACTATGTGATTTTCCCGGTTGC 59.247 45.455 0.00 0.00 0.00 4.17
4773 5558 1.923356 ATGTGATTTTCCCGGTTGCT 58.077 45.000 0.00 0.00 0.00 3.91
4774 5559 1.243902 TGTGATTTTCCCGGTTGCTC 58.756 50.000 0.00 0.00 0.00 4.26
4775 5560 0.526211 GTGATTTTCCCGGTTGCTCC 59.474 55.000 0.00 0.00 0.00 4.70
4776 5561 0.404040 TGATTTTCCCGGTTGCTCCT 59.596 50.000 0.00 0.00 0.00 3.69
4777 5562 1.631388 TGATTTTCCCGGTTGCTCCTA 59.369 47.619 0.00 0.00 0.00 2.94
4778 5563 2.014857 GATTTTCCCGGTTGCTCCTAC 58.985 52.381 0.00 0.00 0.00 3.18
4779 5564 1.061546 TTTTCCCGGTTGCTCCTACT 58.938 50.000 0.00 0.00 0.00 2.57
4780 5565 0.323629 TTTCCCGGTTGCTCCTACTG 59.676 55.000 0.00 0.00 0.00 2.74
4781 5566 1.550130 TTCCCGGTTGCTCCTACTGG 61.550 60.000 0.00 0.00 40.97 4.00
4782 5567 1.987855 CCCGGTTGCTCCTACTGGA 60.988 63.158 0.00 0.00 43.44 3.86
4783 5568 1.218316 CCGGTTGCTCCTACTGGAC 59.782 63.158 0.00 0.00 43.44 4.02
4784 5569 1.541310 CCGGTTGCTCCTACTGGACA 61.541 60.000 0.00 0.00 43.44 4.02
4785 5570 0.108615 CGGTTGCTCCTACTGGACAG 60.109 60.000 0.00 0.00 37.46 3.51
4786 5571 0.391793 GGTTGCTCCTACTGGACAGC 60.392 60.000 0.00 0.00 37.46 4.40
4787 5572 0.321671 GTTGCTCCTACTGGACAGCA 59.678 55.000 0.00 0.00 40.39 4.41
4788 5573 0.610174 TTGCTCCTACTGGACAGCAG 59.390 55.000 0.00 0.00 42.16 4.24
4789 5574 0.542938 TGCTCCTACTGGACAGCAGT 60.543 55.000 0.00 0.00 38.23 4.40
4790 5575 0.108424 GCTCCTACTGGACAGCAGTG 60.108 60.000 0.00 0.00 37.46 3.66
4791 5576 1.261480 CTCCTACTGGACAGCAGTGT 58.739 55.000 0.00 0.00 40.71 3.55
4829 5614 9.952030 TTTTTCCTTTCACCTTTTATGTTCTTT 57.048 25.926 0.00 0.00 0.00 2.52
4865 5650 8.695456 AGTTCTTACCTTTTTGATCAACATTGT 58.305 29.630 7.89 6.39 0.00 2.71
4866 5651 9.959749 GTTCTTACCTTTTTGATCAACATTGTA 57.040 29.630 7.89 5.43 0.00 2.41
4915 5700 9.750125 TTTAACATAGTACAGATGCATAGAGTG 57.250 33.333 0.00 0.00 0.00 3.51
4928 5713 2.409651 GAGTGCTCCTCTACGGCG 59.590 66.667 4.80 4.80 37.22 6.46
4929 5714 3.759766 GAGTGCTCCTCTACGGCGC 62.760 68.421 6.90 0.00 43.92 6.53
4930 5715 4.874977 GTGCTCCTCTACGGCGCC 62.875 72.222 19.07 19.07 42.97 6.53
4932 5717 3.839432 GCTCCTCTACGGCGCCTT 61.839 66.667 26.68 19.30 37.54 4.35
4933 5718 2.487532 GCTCCTCTACGGCGCCTTA 61.488 63.158 26.68 19.41 37.54 2.69
4934 5719 1.807495 GCTCCTCTACGGCGCCTTAT 61.807 60.000 26.68 12.58 37.54 1.73
4935 5720 0.039074 CTCCTCTACGGCGCCTTATG 60.039 60.000 26.68 11.62 0.00 1.90
4936 5721 1.664965 CCTCTACGGCGCCTTATGC 60.665 63.158 26.68 0.00 0.00 3.14
4945 5730 2.709475 GCCTTATGCGCCTGTTCG 59.291 61.111 4.18 0.00 0.00 3.95
4977 5762 2.895865 CGCAGCAGCCTCTCATGG 60.896 66.667 0.00 0.00 37.52 3.66
4978 5763 2.516460 GCAGCAGCCTCTCATGGG 60.516 66.667 0.00 0.00 33.58 4.00
4997 5782 4.087892 CGGCCCAGCTAGCACACT 62.088 66.667 18.83 0.00 0.00 3.55
4998 5783 2.124942 GGCCCAGCTAGCACACTC 60.125 66.667 18.83 1.49 0.00 3.51
4999 5784 2.665000 GCCCAGCTAGCACACTCA 59.335 61.111 18.83 0.00 0.00 3.41
5000 5785 1.743252 GCCCAGCTAGCACACTCAC 60.743 63.158 18.83 0.00 0.00 3.51
5001 5786 1.446792 CCCAGCTAGCACACTCACG 60.447 63.158 18.83 0.00 0.00 4.35
5002 5787 1.290324 CCAGCTAGCACACTCACGT 59.710 57.895 18.83 0.00 0.00 4.49
5003 5788 0.319900 CCAGCTAGCACACTCACGTT 60.320 55.000 18.83 0.00 0.00 3.99
5004 5789 1.502231 CAGCTAGCACACTCACGTTT 58.498 50.000 18.83 0.00 0.00 3.60
5005 5790 1.867233 CAGCTAGCACACTCACGTTTT 59.133 47.619 18.83 0.00 0.00 2.43
5006 5791 2.096713 CAGCTAGCACACTCACGTTTTC 60.097 50.000 18.83 0.00 0.00 2.29
5007 5792 1.194772 GCTAGCACACTCACGTTTTCC 59.805 52.381 10.63 0.00 0.00 3.13
5008 5793 1.455786 CTAGCACACTCACGTTTTCCG 59.544 52.381 0.00 0.00 44.03 4.30
5019 5804 0.094730 CGTTTTCCGTTCTCCATCGC 59.905 55.000 0.00 0.00 0.00 4.58
5020 5805 1.439679 GTTTTCCGTTCTCCATCGCT 58.560 50.000 0.00 0.00 0.00 4.93
5021 5806 1.393883 GTTTTCCGTTCTCCATCGCTC 59.606 52.381 0.00 0.00 0.00 5.03
5022 5807 0.457853 TTTCCGTTCTCCATCGCTCG 60.458 55.000 0.00 0.00 0.00 5.03
5023 5808 2.884087 TTCCGTTCTCCATCGCTCGC 62.884 60.000 0.00 0.00 0.00 5.03
5024 5809 2.103143 CGTTCTCCATCGCTCGCT 59.897 61.111 0.00 0.00 0.00 4.93
5025 5810 1.941734 CGTTCTCCATCGCTCGCTC 60.942 63.158 0.00 0.00 0.00 5.03
5026 5811 1.590259 GTTCTCCATCGCTCGCTCC 60.590 63.158 0.00 0.00 0.00 4.70
5027 5812 1.754621 TTCTCCATCGCTCGCTCCT 60.755 57.895 0.00 0.00 0.00 3.69
5028 5813 1.323271 TTCTCCATCGCTCGCTCCTT 61.323 55.000 0.00 0.00 0.00 3.36
5029 5814 1.299773 CTCCATCGCTCGCTCCTTC 60.300 63.158 0.00 0.00 0.00 3.46
5030 5815 2.279784 CCATCGCTCGCTCCTTCC 60.280 66.667 0.00 0.00 0.00 3.46
5031 5816 2.279784 CATCGCTCGCTCCTTCCC 60.280 66.667 0.00 0.00 0.00 3.97
5032 5817 2.443016 ATCGCTCGCTCCTTCCCT 60.443 61.111 0.00 0.00 0.00 4.20
5033 5818 2.060980 ATCGCTCGCTCCTTCCCTT 61.061 57.895 0.00 0.00 0.00 3.95
5034 5819 2.022240 ATCGCTCGCTCCTTCCCTTC 62.022 60.000 0.00 0.00 0.00 3.46
5035 5820 2.188207 GCTCGCTCCTTCCCTTCC 59.812 66.667 0.00 0.00 0.00 3.46
5036 5821 2.363172 GCTCGCTCCTTCCCTTCCT 61.363 63.158 0.00 0.00 0.00 3.36
5037 5822 1.904990 GCTCGCTCCTTCCCTTCCTT 61.905 60.000 0.00 0.00 0.00 3.36
5038 5823 0.615850 CTCGCTCCTTCCCTTCCTTT 59.384 55.000 0.00 0.00 0.00 3.11
5039 5824 0.324943 TCGCTCCTTCCCTTCCTTTG 59.675 55.000 0.00 0.00 0.00 2.77
5040 5825 0.036875 CGCTCCTTCCCTTCCTTTGT 59.963 55.000 0.00 0.00 0.00 2.83
5041 5826 1.539157 GCTCCTTCCCTTCCTTTGTG 58.461 55.000 0.00 0.00 0.00 3.33
5042 5827 1.539157 CTCCTTCCCTTCCTTTGTGC 58.461 55.000 0.00 0.00 0.00 4.57
5043 5828 0.850100 TCCTTCCCTTCCTTTGTGCA 59.150 50.000 0.00 0.00 0.00 4.57
5044 5829 0.961753 CCTTCCCTTCCTTTGTGCAC 59.038 55.000 10.75 10.75 0.00 4.57
5045 5830 0.593128 CTTCCCTTCCTTTGTGCACG 59.407 55.000 13.13 0.00 0.00 5.34
5046 5831 0.106918 TTCCCTTCCTTTGTGCACGT 60.107 50.000 13.13 0.00 0.00 4.49
5047 5832 0.106918 TCCCTTCCTTTGTGCACGTT 60.107 50.000 13.13 0.00 0.00 3.99
5048 5833 0.744281 CCCTTCCTTTGTGCACGTTT 59.256 50.000 13.13 0.00 0.00 3.60
5049 5834 1.269051 CCCTTCCTTTGTGCACGTTTC 60.269 52.381 13.13 0.00 0.00 2.78
5050 5835 1.596954 CCTTCCTTTGTGCACGTTTCG 60.597 52.381 13.13 0.00 0.00 3.46
5051 5836 1.063469 CTTCCTTTGTGCACGTTTCGT 59.937 47.619 13.13 0.00 42.36 3.85
5052 5837 1.088306 TCCTTTGTGCACGTTTCGTT 58.912 45.000 13.13 0.00 38.32 3.85
5053 5838 1.062880 TCCTTTGTGCACGTTTCGTTC 59.937 47.619 13.13 0.00 38.32 3.95
5054 5839 1.101454 CTTTGTGCACGTTTCGTTCG 58.899 50.000 13.13 0.00 38.32 3.95
5055 5840 0.443088 TTTGTGCACGTTTCGTTCGT 59.557 45.000 13.13 0.00 38.32 3.85
5056 5841 0.443088 TTGTGCACGTTTCGTTCGTT 59.557 45.000 13.13 0.00 38.32 3.85
5057 5842 0.025256 TGTGCACGTTTCGTTCGTTC 59.975 50.000 13.13 0.00 38.32 3.95
5058 5843 0.978684 GTGCACGTTTCGTTCGTTCG 60.979 55.000 0.00 0.00 38.32 3.95
5059 5844 1.270678 GCACGTTTCGTTCGTTCGT 59.729 52.632 0.00 0.00 38.32 3.85
5060 5845 0.314498 GCACGTTTCGTTCGTTCGTT 60.314 50.000 0.00 0.00 38.32 3.85
5061 5846 1.628985 CACGTTTCGTTCGTTCGTTC 58.371 50.000 0.00 0.00 38.32 3.95
5062 5847 1.253545 CACGTTTCGTTCGTTCGTTCT 59.746 47.619 0.00 0.00 38.32 3.01
5063 5848 1.919918 ACGTTTCGTTCGTTCGTTCTT 59.080 42.857 0.00 0.00 36.35 2.52
5064 5849 2.345341 ACGTTTCGTTCGTTCGTTCTTT 59.655 40.909 0.00 0.00 36.35 2.52
5065 5850 3.181531 ACGTTTCGTTCGTTCGTTCTTTT 60.182 39.130 0.00 0.00 36.35 2.27
5066 5851 3.775094 CGTTTCGTTCGTTCGTTCTTTTT 59.225 39.130 2.67 0.00 0.00 1.94
5087 5872 2.607631 TTTTCTGTTCGTCCCTTCGT 57.392 45.000 0.00 0.00 0.00 3.85
5088 5873 2.607631 TTTCTGTTCGTCCCTTCGTT 57.392 45.000 0.00 0.00 0.00 3.85
5089 5874 2.144482 TTCTGTTCGTCCCTTCGTTC 57.856 50.000 0.00 0.00 0.00 3.95
5090 5875 1.034356 TCTGTTCGTCCCTTCGTTCA 58.966 50.000 0.00 0.00 0.00 3.18
5091 5876 1.137513 CTGTTCGTCCCTTCGTTCAC 58.862 55.000 0.00 0.00 0.00 3.18
5092 5877 0.460722 TGTTCGTCCCTTCGTTCACA 59.539 50.000 0.00 0.00 0.00 3.58
5093 5878 1.134759 TGTTCGTCCCTTCGTTCACAA 60.135 47.619 0.00 0.00 0.00 3.33
5094 5879 1.935199 GTTCGTCCCTTCGTTCACAAA 59.065 47.619 0.00 0.00 0.00 2.83
5095 5880 2.312722 TCGTCCCTTCGTTCACAAAA 57.687 45.000 0.00 0.00 0.00 2.44
5096 5881 1.935199 TCGTCCCTTCGTTCACAAAAC 59.065 47.619 0.00 0.00 0.00 2.43
5097 5882 1.937899 CGTCCCTTCGTTCACAAAACT 59.062 47.619 0.00 0.00 0.00 2.66
5098 5883 2.286184 CGTCCCTTCGTTCACAAAACTG 60.286 50.000 0.00 0.00 0.00 3.16
5099 5884 2.940410 GTCCCTTCGTTCACAAAACTGA 59.060 45.455 0.00 0.00 0.00 3.41
5100 5885 3.375922 GTCCCTTCGTTCACAAAACTGAA 59.624 43.478 0.00 0.00 0.00 3.02
5101 5886 4.011023 TCCCTTCGTTCACAAAACTGAAA 58.989 39.130 0.00 0.00 31.90 2.69
5102 5887 4.095782 TCCCTTCGTTCACAAAACTGAAAG 59.904 41.667 0.00 0.00 42.29 2.62
5103 5888 3.791353 CCTTCGTTCACAAAACTGAAAGC 59.209 43.478 0.00 0.00 37.60 3.51
5104 5889 4.411327 CTTCGTTCACAAAACTGAAAGCA 58.589 39.130 0.00 0.00 37.60 3.91
5105 5890 4.630894 TCGTTCACAAAACTGAAAGCAT 57.369 36.364 0.00 0.00 37.60 3.79
5106 5891 5.743026 TCGTTCACAAAACTGAAAGCATA 57.257 34.783 0.00 0.00 37.60 3.14
5107 5892 6.312399 TCGTTCACAAAACTGAAAGCATAT 57.688 33.333 0.00 0.00 37.60 1.78
5108 5893 7.428282 TCGTTCACAAAACTGAAAGCATATA 57.572 32.000 0.00 0.00 37.60 0.86
5109 5894 7.866729 TCGTTCACAAAACTGAAAGCATATAA 58.133 30.769 0.00 0.00 37.60 0.98
5110 5895 8.346300 TCGTTCACAAAACTGAAAGCATATAAA 58.654 29.630 0.00 0.00 37.60 1.40
5111 5896 8.963130 CGTTCACAAAACTGAAAGCATATAAAA 58.037 29.630 0.00 0.00 37.60 1.52
5114 5899 9.474920 TCACAAAACTGAAAGCATATAAAAAGG 57.525 29.630 0.00 0.00 37.60 3.11
5115 5900 9.474920 CACAAAACTGAAAGCATATAAAAAGGA 57.525 29.630 0.00 0.00 37.60 3.36
5116 5901 9.476202 ACAAAACTGAAAGCATATAAAAAGGAC 57.524 29.630 0.00 0.00 37.60 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
116 117 1.299648 CCATGGGCTTCTGGAACGA 59.700 57.895 2.85 0.00 34.24 3.85
268 270 2.126463 CACACGTCGAGCGGTCAT 60.126 61.111 15.89 0.00 46.52 3.06
269 271 4.337060 CCACACGTCGAGCGGTCA 62.337 66.667 15.89 0.00 46.52 4.02
284 286 2.290287 CGGTCCCACCTGTCATCCA 61.290 63.158 0.00 0.00 35.66 3.41
524 528 1.321074 GCGACCCTATCCTATCCGGG 61.321 65.000 0.00 0.00 42.53 5.73
568 572 3.825611 AATTCCACCATGCGCCGC 61.826 61.111 4.18 0.00 0.00 6.53
569 573 2.102749 CAATTCCACCATGCGCCG 59.897 61.111 4.18 0.00 0.00 6.46
570 574 2.283472 GACCAATTCCACCATGCGCC 62.283 60.000 4.18 0.00 0.00 6.53
571 575 1.139520 GACCAATTCCACCATGCGC 59.860 57.895 0.00 0.00 0.00 6.09
572 576 0.887247 TTGACCAATTCCACCATGCG 59.113 50.000 0.00 0.00 0.00 4.73
573 577 3.055963 TCATTTGACCAATTCCACCATGC 60.056 43.478 0.00 0.00 0.00 4.06
574 578 4.382254 CCTCATTTGACCAATTCCACCATG 60.382 45.833 0.00 0.00 0.00 3.66
575 579 3.770933 CCTCATTTGACCAATTCCACCAT 59.229 43.478 0.00 0.00 0.00 3.55
576 580 3.164268 CCTCATTTGACCAATTCCACCA 58.836 45.455 0.00 0.00 0.00 4.17
577 581 3.056607 CACCTCATTTGACCAATTCCACC 60.057 47.826 0.00 0.00 0.00 4.61
578 582 3.056607 CCACCTCATTTGACCAATTCCAC 60.057 47.826 0.00 0.00 0.00 4.02
579 583 3.164268 CCACCTCATTTGACCAATTCCA 58.836 45.455 0.00 0.00 0.00 3.53
580 584 2.094026 GCCACCTCATTTGACCAATTCC 60.094 50.000 0.00 0.00 0.00 3.01
581 585 2.827921 AGCCACCTCATTTGACCAATTC 59.172 45.455 0.00 0.00 0.00 2.17
582 586 2.893424 AGCCACCTCATTTGACCAATT 58.107 42.857 0.00 0.00 0.00 2.32
583 587 2.564062 CAAGCCACCTCATTTGACCAAT 59.436 45.455 0.00 0.00 0.00 3.16
584 588 1.962807 CAAGCCACCTCATTTGACCAA 59.037 47.619 0.00 0.00 0.00 3.67
585 589 1.619654 CAAGCCACCTCATTTGACCA 58.380 50.000 0.00 0.00 0.00 4.02
586 590 0.890683 CCAAGCCACCTCATTTGACC 59.109 55.000 0.00 0.00 0.00 4.02
587 591 0.244721 GCCAAGCCACCTCATTTGAC 59.755 55.000 0.00 0.00 0.00 3.18
588 592 2.657297 GCCAAGCCACCTCATTTGA 58.343 52.632 0.00 0.00 0.00 2.69
600 604 0.664466 GACGCAGAAAAAGGCCAAGC 60.664 55.000 5.01 0.00 0.00 4.01
601 605 0.667993 TGACGCAGAAAAAGGCCAAG 59.332 50.000 5.01 0.00 0.00 3.61
628 632 2.074729 AGTCAGGCCGTAGCTATCTT 57.925 50.000 0.00 0.00 39.73 2.40
663 671 4.991776 TCCATGTGTTTCCCTGTTTGATA 58.008 39.130 0.00 0.00 0.00 2.15
669 677 3.222603 GTTTCTCCATGTGTTTCCCTGT 58.777 45.455 0.00 0.00 0.00 4.00
670 678 2.226437 CGTTTCTCCATGTGTTTCCCTG 59.774 50.000 0.00 0.00 0.00 4.45
671 679 2.158667 ACGTTTCTCCATGTGTTTCCCT 60.159 45.455 0.00 0.00 0.00 4.20
672 680 2.225727 GACGTTTCTCCATGTGTTTCCC 59.774 50.000 0.00 0.00 0.00 3.97
674 682 4.545823 TTGACGTTTCTCCATGTGTTTC 57.454 40.909 0.00 0.00 0.00 2.78
675 683 4.974368 TTTGACGTTTCTCCATGTGTTT 57.026 36.364 0.00 0.00 0.00 2.83
678 686 5.563751 CGTTTATTTGACGTTTCTCCATGTG 59.436 40.000 0.00 0.00 35.88 3.21
702 713 7.498570 ACTGTCCTAGCACTACTTATACAGTAC 59.501 40.741 0.00 0.00 39.44 2.73
703 714 7.571919 ACTGTCCTAGCACTACTTATACAGTA 58.428 38.462 0.00 0.00 39.44 2.74
704 715 6.424883 ACTGTCCTAGCACTACTTATACAGT 58.575 40.000 0.00 0.00 37.86 3.55
705 716 6.945938 ACTGTCCTAGCACTACTTATACAG 57.054 41.667 0.00 0.00 36.63 2.74
707 718 6.428799 CGAACTGTCCTAGCACTACTTATAC 58.571 44.000 0.00 0.00 0.00 1.47
708 719 5.008415 GCGAACTGTCCTAGCACTACTTATA 59.992 44.000 0.00 0.00 0.00 0.98
709 720 4.202030 GCGAACTGTCCTAGCACTACTTAT 60.202 45.833 0.00 0.00 0.00 1.73
710 721 3.128242 GCGAACTGTCCTAGCACTACTTA 59.872 47.826 0.00 0.00 0.00 2.24
711 722 2.094649 GCGAACTGTCCTAGCACTACTT 60.095 50.000 0.00 0.00 0.00 2.24
742 756 8.610248 TCAGAAGAATTTGTAACCGAATACAA 57.390 30.769 8.38 8.38 42.43 2.41
743 757 8.786826 ATCAGAAGAATTTGTAACCGAATACA 57.213 30.769 0.00 0.00 34.09 2.29
769 783 6.909909 ACGTTTCTTCAAGTTTTCTCTGTTT 58.090 32.000 0.00 0.00 0.00 2.83
869 888 1.068585 GGTCGGAGTTGTTGACCGT 59.931 57.895 0.00 0.00 45.71 4.83
878 897 3.637273 GCAGGTGGGGTCGGAGTT 61.637 66.667 0.00 0.00 0.00 3.01
911 930 2.281970 GGGGTTGTTCGGGTGTCC 60.282 66.667 0.00 0.00 0.00 4.02
939 958 9.495572 AACTGTACAAAAACAAAAAGGAAATCA 57.504 25.926 0.00 0.00 0.00 2.57
944 963 7.541437 CGGTAAACTGTACAAAAACAAAAAGGA 59.459 33.333 0.00 0.00 0.00 3.36
946 965 8.450385 TCGGTAAACTGTACAAAAACAAAAAG 57.550 30.769 0.00 0.00 0.00 2.27
1134 1173 2.048503 GTGTAGTTGCCGCTCGGT 60.049 61.111 10.24 0.00 37.65 4.69
1155 1194 1.675641 GGCCTGGTAGGTGCTGTTG 60.676 63.158 0.00 0.00 37.80 3.33
1428 1467 0.244721 TGTAGTCGTCGTCGAGGAGA 59.755 55.000 17.34 6.63 46.96 3.71
1794 1848 0.956633 TCTGTACGAACTGCGGAAGT 59.043 50.000 0.00 0.00 46.49 3.01
2045 2179 9.973450 GTTAACTGATTCAGAAGCTATATCAGA 57.027 33.333 20.33 3.50 42.95 3.27
2145 2279 1.754803 TCCGGTCGAGCAATTCTATGT 59.245 47.619 15.89 0.00 0.00 2.29
2269 2603 2.677836 TGTGAGTTTCAGAGCACACAAC 59.322 45.455 0.00 0.00 35.41 3.32
2304 2638 8.141909 GCTGGAAAACTTTGTAGTAGGATTTTT 58.858 33.333 0.00 0.00 33.17 1.94
2309 2643 5.298989 TGCTGGAAAACTTTGTAGTAGGA 57.701 39.130 0.00 0.00 33.17 2.94
2310 2644 5.298276 TGTTGCTGGAAAACTTTGTAGTAGG 59.702 40.000 0.00 0.00 33.17 3.18
2312 2646 6.952773 ATGTTGCTGGAAAACTTTGTAGTA 57.047 33.333 0.00 0.00 33.17 1.82
2313 2647 5.852282 ATGTTGCTGGAAAACTTTGTAGT 57.148 34.783 0.00 0.00 35.68 2.73
2314 2648 9.507280 CATATATGTTGCTGGAAAACTTTGTAG 57.493 33.333 4.43 0.00 0.00 2.74
2315 2649 9.019656 ACATATATGTTGCTGGAAAACTTTGTA 57.980 29.630 12.75 0.00 37.90 2.41
2317 2651 9.289303 GTACATATATGTTGCTGGAAAACTTTG 57.711 33.333 22.90 0.00 41.97 2.77
2318 2652 8.466798 GGTACATATATGTTGCTGGAAAACTTT 58.533 33.333 22.90 0.00 41.97 2.66
2321 2655 7.148154 TGTGGTACATATATGTTGCTGGAAAAC 60.148 37.037 22.90 11.49 44.52 2.43
2322 2656 6.887002 TGTGGTACATATATGTTGCTGGAAAA 59.113 34.615 22.90 0.00 44.52 2.29
2323 2657 6.418946 TGTGGTACATATATGTTGCTGGAAA 58.581 36.000 22.90 0.17 44.52 3.13
2325 2659 5.622346 TGTGGTACATATATGTTGCTGGA 57.378 39.130 22.90 1.66 44.52 3.86
2327 2661 7.095060 GGATCTTGTGGTACATATATGTTGCTG 60.095 40.741 22.90 8.17 44.52 4.41
2329 2663 6.149474 GGGATCTTGTGGTACATATATGTTGC 59.851 42.308 22.90 15.50 44.52 4.17
2330 2664 6.368791 CGGGATCTTGTGGTACATATATGTTG 59.631 42.308 22.90 0.00 44.52 3.33
2331 2665 6.269077 TCGGGATCTTGTGGTACATATATGTT 59.731 38.462 22.90 8.14 44.52 2.71
2332 2666 5.778241 TCGGGATCTTGTGGTACATATATGT 59.222 40.000 21.57 21.57 44.52 2.29
2333 2667 6.280855 TCGGGATCTTGTGGTACATATATG 57.719 41.667 11.29 11.29 44.52 1.78
2342 2676 1.405526 CGTCAATCGGGATCTTGTGGT 60.406 52.381 0.00 0.00 35.71 4.16
2344 2678 2.010145 ACGTCAATCGGGATCTTGTG 57.990 50.000 0.00 0.00 44.69 3.33
2352 2686 6.532657 ACTTGTTAGTTATAACGTCAATCGGG 59.467 38.462 9.91 7.53 43.61 5.14
2468 2899 2.363038 CACAACAGGGATGGCCAATATG 59.637 50.000 10.96 9.40 35.15 1.78
2481 2912 5.124776 TCCAACAGAAAAAGTACACAACAGG 59.875 40.000 0.00 0.00 0.00 4.00
2486 2917 5.105567 TCCTCCAACAGAAAAAGTACACA 57.894 39.130 0.00 0.00 0.00 3.72
2585 3019 9.232473 CTGATGGATAATCAATTGAGTCATCAT 57.768 33.333 25.88 20.05 44.77 2.45
2846 3366 3.379057 ACGTTTCCCACCACTAAAACTTG 59.621 43.478 0.00 0.00 31.12 3.16
2856 3376 1.134037 ACAAAGCTACGTTTCCCACCA 60.134 47.619 0.00 0.00 0.00 4.17
3055 3579 3.312421 TCTCTTGTTCTTCCAAGCAAACG 59.688 43.478 0.00 0.00 41.29 3.60
3097 3621 0.245539 CAAGGCTTCTGTTGGGCATG 59.754 55.000 0.00 0.00 0.00 4.06
3212 3744 4.637483 ATCTGTGGTTCAAACAAGTGTG 57.363 40.909 0.00 0.00 0.00 3.82
3241 3799 1.882623 CCCAGTCCAGCTCTTTGTTTC 59.117 52.381 0.00 0.00 0.00 2.78
3686 4270 2.079925 GGTGCTCACAAGATTCAGGAC 58.920 52.381 2.21 0.00 0.00 3.85
3712 4298 1.337167 CGTGCAGAGTTCATGGACAGA 60.337 52.381 6.96 0.00 38.77 3.41
3721 4307 2.253758 TTGGCTGCGTGCAGAGTTC 61.254 57.895 25.09 11.04 46.30 3.01
3762 4497 0.592637 GCACCAAATTTTGCAAGGGC 59.407 50.000 9.48 0.00 38.68 5.19
4083 4821 0.037326 GCTCCGTGATGGACACTTGA 60.037 55.000 0.00 0.00 43.74 3.02
4125 4885 5.445010 CCGTAAGAAAACTATACACGGTTGC 60.445 44.000 0.00 0.00 41.81 4.17
4128 4888 4.462483 TCCCGTAAGAAAACTATACACGGT 59.538 41.667 9.15 0.00 44.46 4.83
4130 4890 7.420800 ACTATCCCGTAAGAAAACTATACACG 58.579 38.462 0.00 0.00 43.02 4.49
4152 4913 8.456940 TCCTCCTCCAAGATCATTAAGATACTA 58.543 37.037 0.00 0.00 37.00 1.82
4158 4919 6.464180 CCTCTTCCTCCTCCAAGATCATTAAG 60.464 46.154 0.00 0.00 0.00 1.85
4160 4921 4.904251 CCTCTTCCTCCTCCAAGATCATTA 59.096 45.833 0.00 0.00 0.00 1.90
4162 4923 3.316501 CCTCTTCCTCCTCCAAGATCAT 58.683 50.000 0.00 0.00 0.00 2.45
4164 4925 1.416030 GCCTCTTCCTCCTCCAAGATC 59.584 57.143 0.00 0.00 0.00 2.75
4165 4926 1.506025 GCCTCTTCCTCCTCCAAGAT 58.494 55.000 0.00 0.00 0.00 2.40
4166 4927 0.618968 GGCCTCTTCCTCCTCCAAGA 60.619 60.000 0.00 0.00 0.00 3.02
4167 4928 1.631071 GGGCCTCTTCCTCCTCCAAG 61.631 65.000 0.84 0.00 0.00 3.61
4169 4930 2.041265 GGGCCTCTTCCTCCTCCA 59.959 66.667 0.84 0.00 0.00 3.86
4194 4975 4.976731 CAGTAATAGACACCGATACAGCAC 59.023 45.833 0.00 0.00 0.00 4.40
4195 4976 4.885325 TCAGTAATAGACACCGATACAGCA 59.115 41.667 0.00 0.00 0.00 4.41
4196 4977 5.434352 TCAGTAATAGACACCGATACAGC 57.566 43.478 0.00 0.00 0.00 4.40
4197 4978 6.039493 AGGTTCAGTAATAGACACCGATACAG 59.961 42.308 0.00 0.00 0.00 2.74
4198 4979 5.889853 AGGTTCAGTAATAGACACCGATACA 59.110 40.000 0.00 0.00 0.00 2.29
4199 4980 6.388435 AGGTTCAGTAATAGACACCGATAC 57.612 41.667 0.00 0.00 0.00 2.24
4200 4981 7.262772 CAAAGGTTCAGTAATAGACACCGATA 58.737 38.462 0.00 0.00 0.00 2.92
4201 4982 5.934402 AAGGTTCAGTAATAGACACCGAT 57.066 39.130 0.00 0.00 0.00 4.18
4220 5001 3.149196 ACTTACATCCACAGTGCAAAGG 58.851 45.455 0.00 0.00 0.00 3.11
4345 5126 9.267084 GGGAATAATTTAGTTGAACAGCAAAAA 57.733 29.630 0.00 0.00 38.44 1.94
4350 5131 5.124936 ACGGGGAATAATTTAGTTGAACAGC 59.875 40.000 0.00 0.00 0.00 4.40
4369 5150 2.744709 CCGTTGTAAGGCACGGGG 60.745 66.667 5.51 0.00 37.78 5.73
4374 5155 4.967084 ATGTATATCCCGTTGTAAGGCA 57.033 40.909 0.00 0.00 0.00 4.75
4407 5188 9.703892 AATATGAGCAGATAAATCACAGACTAC 57.296 33.333 0.00 0.00 0.00 2.73
4469 5251 9.895138 ATTCATTTAGGTAGGTAAATTACGTGT 57.105 29.630 8.43 0.00 31.49 4.49
4554 5337 4.868067 TCCTTGAAGACGTCTTAACTGTC 58.132 43.478 29.79 17.17 36.11 3.51
4568 5351 6.635755 TGGTTTTTACCAGTTTTCCTTGAAG 58.364 36.000 0.00 0.00 34.33 3.02
4581 5364 2.570415 TCCATCGCTGGTTTTTACCA 57.430 45.000 5.00 0.00 43.61 3.25
4585 5368 4.664150 TTTCTTTCCATCGCTGGTTTTT 57.336 36.364 5.00 0.00 43.61 1.94
4590 5373 4.808558 TGAAATTTTCTTTCCATCGCTGG 58.191 39.130 10.33 0.00 44.64 4.85
4592 5375 6.074356 CGTTTTGAAATTTTCTTTCCATCGCT 60.074 34.615 10.33 0.00 0.00 4.93
4593 5376 6.064525 CGTTTTGAAATTTTCTTTCCATCGC 58.935 36.000 10.33 0.00 0.00 4.58
4594 5377 7.388290 TCGTTTTGAAATTTTCTTTCCATCG 57.612 32.000 10.33 6.52 0.00 3.84
4595 5378 9.030301 TCTTCGTTTTGAAATTTTCTTTCCATC 57.970 29.630 10.33 0.00 35.79 3.51
4596 5379 8.940768 TCTTCGTTTTGAAATTTTCTTTCCAT 57.059 26.923 10.33 0.00 35.79 3.41
4597 5380 8.247562 TCTCTTCGTTTTGAAATTTTCTTTCCA 58.752 29.630 10.33 0.00 35.79 3.53
4602 5387 6.697455 GCCTTCTCTTCGTTTTGAAATTTTCT 59.303 34.615 10.33 0.00 35.79 2.52
4629 5414 7.515528 CGTCGTTCAACTTTACTTATGTTCACA 60.516 37.037 0.00 0.00 0.00 3.58
4631 5416 6.562640 GCGTCGTTCAACTTTACTTATGTTCA 60.563 38.462 0.00 0.00 0.00 3.18
4639 5424 0.505655 GCGCGTCGTTCAACTTTACT 59.494 50.000 8.43 0.00 0.00 2.24
4646 5431 1.491127 CAGAATGCGCGTCGTTCAA 59.509 52.632 26.05 1.64 41.95 2.69
4689 5474 9.653516 TCATCTCTCTCTCCTTACTTGATAAAT 57.346 33.333 0.00 0.00 0.00 1.40
4690 5475 9.130661 CTCATCTCTCTCTCCTTACTTGATAAA 57.869 37.037 0.00 0.00 0.00 1.40
4691 5476 7.723616 CCTCATCTCTCTCTCCTTACTTGATAA 59.276 40.741 0.00 0.00 0.00 1.75
4692 5477 7.230747 CCTCATCTCTCTCTCCTTACTTGATA 58.769 42.308 0.00 0.00 0.00 2.15
4693 5478 6.070656 CCTCATCTCTCTCTCCTTACTTGAT 58.929 44.000 0.00 0.00 0.00 2.57
4694 5479 5.445069 CCTCATCTCTCTCTCCTTACTTGA 58.555 45.833 0.00 0.00 0.00 3.02
4695 5480 4.584325 CCCTCATCTCTCTCTCCTTACTTG 59.416 50.000 0.00 0.00 0.00 3.16
4696 5481 4.231890 ACCCTCATCTCTCTCTCCTTACTT 59.768 45.833 0.00 0.00 0.00 2.24
4697 5482 3.791545 ACCCTCATCTCTCTCTCCTTACT 59.208 47.826 0.00 0.00 0.00 2.24
4698 5483 3.888930 CACCCTCATCTCTCTCTCCTTAC 59.111 52.174 0.00 0.00 0.00 2.34
4699 5484 3.689858 GCACCCTCATCTCTCTCTCCTTA 60.690 52.174 0.00 0.00 0.00 2.69
4700 5485 2.954539 GCACCCTCATCTCTCTCTCCTT 60.955 54.545 0.00 0.00 0.00 3.36
4701 5486 1.411501 GCACCCTCATCTCTCTCTCCT 60.412 57.143 0.00 0.00 0.00 3.69
4702 5487 1.039856 GCACCCTCATCTCTCTCTCC 58.960 60.000 0.00 0.00 0.00 3.71
4703 5488 1.774110 TGCACCCTCATCTCTCTCTC 58.226 55.000 0.00 0.00 0.00 3.20
4704 5489 2.109774 CTTGCACCCTCATCTCTCTCT 58.890 52.381 0.00 0.00 0.00 3.10
4705 5490 1.473080 GCTTGCACCCTCATCTCTCTC 60.473 57.143 0.00 0.00 0.00 3.20
4706 5491 0.540923 GCTTGCACCCTCATCTCTCT 59.459 55.000 0.00 0.00 0.00 3.10
4707 5492 0.540923 AGCTTGCACCCTCATCTCTC 59.459 55.000 0.00 0.00 0.00 3.20
4708 5493 0.990374 AAGCTTGCACCCTCATCTCT 59.010 50.000 0.00 0.00 0.00 3.10
4709 5494 1.831580 AAAGCTTGCACCCTCATCTC 58.168 50.000 0.00 0.00 0.00 2.75
4710 5495 2.299326 AAAAGCTTGCACCCTCATCT 57.701 45.000 0.00 0.00 0.00 2.90
4711 5496 2.560105 AGAAAAAGCTTGCACCCTCATC 59.440 45.455 0.00 0.00 0.00 2.92
4712 5497 2.601905 AGAAAAAGCTTGCACCCTCAT 58.398 42.857 0.00 0.00 0.00 2.90
4713 5498 2.071778 AGAAAAAGCTTGCACCCTCA 57.928 45.000 0.00 0.00 0.00 3.86
4714 5499 3.149981 ACTAGAAAAAGCTTGCACCCTC 58.850 45.455 0.00 0.00 0.00 4.30
4715 5500 3.149981 GACTAGAAAAAGCTTGCACCCT 58.850 45.455 0.00 0.00 0.00 4.34
4716 5501 3.149981 AGACTAGAAAAAGCTTGCACCC 58.850 45.455 0.00 0.00 0.00 4.61
4717 5502 3.120511 CGAGACTAGAAAAAGCTTGCACC 60.121 47.826 0.00 0.00 0.00 5.01
4718 5503 3.495001 ACGAGACTAGAAAAAGCTTGCAC 59.505 43.478 0.00 0.00 0.00 4.57
4719 5504 3.728845 ACGAGACTAGAAAAAGCTTGCA 58.271 40.909 0.00 0.00 0.00 4.08
4720 5505 5.840940 TTACGAGACTAGAAAAAGCTTGC 57.159 39.130 0.00 0.00 0.00 4.01
4721 5506 6.424207 AGGTTTACGAGACTAGAAAAAGCTTG 59.576 38.462 0.00 0.00 32.49 4.01
4722 5507 6.522946 AGGTTTACGAGACTAGAAAAAGCTT 58.477 36.000 0.00 0.00 32.49 3.74
4723 5508 6.099159 AGGTTTACGAGACTAGAAAAAGCT 57.901 37.500 0.00 11.16 31.79 3.74
4724 5509 7.383300 TGTTAGGTTTACGAGACTAGAAAAAGC 59.617 37.037 0.00 8.26 0.00 3.51
4725 5510 8.807667 TGTTAGGTTTACGAGACTAGAAAAAG 57.192 34.615 0.00 0.00 0.00 2.27
4726 5511 9.034544 GTTGTTAGGTTTACGAGACTAGAAAAA 57.965 33.333 0.00 0.00 0.00 1.94
4727 5512 8.416329 AGTTGTTAGGTTTACGAGACTAGAAAA 58.584 33.333 0.00 0.00 0.00 2.29
4728 5513 7.945134 AGTTGTTAGGTTTACGAGACTAGAAA 58.055 34.615 0.00 0.00 0.00 2.52
4729 5514 7.516198 AGTTGTTAGGTTTACGAGACTAGAA 57.484 36.000 0.00 0.00 0.00 2.10
4730 5515 8.671921 CATAGTTGTTAGGTTTACGAGACTAGA 58.328 37.037 0.00 0.00 0.00 2.43
4731 5516 8.457261 ACATAGTTGTTAGGTTTACGAGACTAG 58.543 37.037 0.00 0.00 29.55 2.57
4732 5517 8.239314 CACATAGTTGTTAGGTTTACGAGACTA 58.761 37.037 0.00 0.00 32.34 2.59
4733 5518 7.040201 TCACATAGTTGTTAGGTTTACGAGACT 60.040 37.037 0.00 0.00 32.34 3.24
4734 5519 7.086376 TCACATAGTTGTTAGGTTTACGAGAC 58.914 38.462 0.00 0.00 32.34 3.36
4735 5520 7.218228 TCACATAGTTGTTAGGTTTACGAGA 57.782 36.000 0.00 0.00 32.34 4.04
4736 5521 8.475331 AATCACATAGTTGTTAGGTTTACGAG 57.525 34.615 0.00 0.00 32.34 4.18
4737 5522 8.836268 AAATCACATAGTTGTTAGGTTTACGA 57.164 30.769 0.00 0.00 32.34 3.43
4738 5523 9.537848 GAAAATCACATAGTTGTTAGGTTTACG 57.462 33.333 0.00 0.00 32.34 3.18
4739 5524 9.836076 GGAAAATCACATAGTTGTTAGGTTTAC 57.164 33.333 0.00 0.00 32.34 2.01
4740 5525 9.016438 GGGAAAATCACATAGTTGTTAGGTTTA 57.984 33.333 0.00 0.00 32.34 2.01
4741 5526 7.308951 CGGGAAAATCACATAGTTGTTAGGTTT 60.309 37.037 0.00 0.00 32.34 3.27
4742 5527 6.150474 CGGGAAAATCACATAGTTGTTAGGTT 59.850 38.462 0.00 0.00 32.34 3.50
4743 5528 5.646360 CGGGAAAATCACATAGTTGTTAGGT 59.354 40.000 0.00 0.00 32.34 3.08
4744 5529 5.065988 CCGGGAAAATCACATAGTTGTTAGG 59.934 44.000 0.00 0.00 32.34 2.69
4745 5530 5.646360 ACCGGGAAAATCACATAGTTGTTAG 59.354 40.000 6.32 0.00 32.34 2.34
4746 5531 5.562635 ACCGGGAAAATCACATAGTTGTTA 58.437 37.500 6.32 0.00 32.34 2.41
4747 5532 4.403734 ACCGGGAAAATCACATAGTTGTT 58.596 39.130 6.32 0.00 32.34 2.83
4748 5533 4.028993 ACCGGGAAAATCACATAGTTGT 57.971 40.909 6.32 0.00 36.15 3.32
4749 5534 4.732784 CAACCGGGAAAATCACATAGTTG 58.267 43.478 6.32 0.00 0.00 3.16
4750 5535 3.192633 GCAACCGGGAAAATCACATAGTT 59.807 43.478 6.32 0.00 0.00 2.24
4751 5536 2.752903 GCAACCGGGAAAATCACATAGT 59.247 45.455 6.32 0.00 0.00 2.12
4752 5537 3.016736 AGCAACCGGGAAAATCACATAG 58.983 45.455 6.32 0.00 0.00 2.23
4753 5538 3.013921 GAGCAACCGGGAAAATCACATA 58.986 45.455 6.32 0.00 0.00 2.29
4754 5539 1.818674 GAGCAACCGGGAAAATCACAT 59.181 47.619 6.32 0.00 0.00 3.21
4755 5540 1.243902 GAGCAACCGGGAAAATCACA 58.756 50.000 6.32 0.00 0.00 3.58
4756 5541 0.526211 GGAGCAACCGGGAAAATCAC 59.474 55.000 6.32 0.00 0.00 3.06
4757 5542 0.404040 AGGAGCAACCGGGAAAATCA 59.596 50.000 6.32 0.00 44.74 2.57
4758 5543 2.014857 GTAGGAGCAACCGGGAAAATC 58.985 52.381 6.32 0.00 44.74 2.17
4759 5544 1.633945 AGTAGGAGCAACCGGGAAAAT 59.366 47.619 6.32 0.00 44.74 1.82
4760 5545 1.061546 AGTAGGAGCAACCGGGAAAA 58.938 50.000 6.32 0.00 44.74 2.29
4761 5546 0.323629 CAGTAGGAGCAACCGGGAAA 59.676 55.000 6.32 0.00 44.74 3.13
4762 5547 1.550130 CCAGTAGGAGCAACCGGGAA 61.550 60.000 6.32 0.00 44.74 3.97
4763 5548 1.987855 CCAGTAGGAGCAACCGGGA 60.988 63.158 6.32 0.00 44.74 5.14
4764 5549 1.987855 TCCAGTAGGAGCAACCGGG 60.988 63.158 6.32 0.00 44.74 5.73
4765 5550 1.218316 GTCCAGTAGGAGCAACCGG 59.782 63.158 0.00 0.00 46.92 5.28
4766 5551 0.108615 CTGTCCAGTAGGAGCAACCG 60.109 60.000 0.00 0.00 46.92 4.44
4767 5552 0.391793 GCTGTCCAGTAGGAGCAACC 60.392 60.000 0.00 0.00 46.92 3.77
4768 5553 0.321671 TGCTGTCCAGTAGGAGCAAC 59.678 55.000 0.00 0.00 46.92 4.17
4769 5554 0.610174 CTGCTGTCCAGTAGGAGCAA 59.390 55.000 4.66 0.00 46.92 3.91
4770 5555 2.280835 CTGCTGTCCAGTAGGAGCA 58.719 57.895 4.66 0.00 46.92 4.26
4778 5563 0.969149 TACCTGACACTGCTGTCCAG 59.031 55.000 12.78 12.78 45.68 3.86
4779 5564 1.644509 ATACCTGACACTGCTGTCCA 58.355 50.000 3.85 0.36 45.68 4.02
4780 5565 2.770164 AATACCTGACACTGCTGTCC 57.230 50.000 3.85 0.00 45.68 4.02
4781 5566 6.743575 AAAATAATACCTGACACTGCTGTC 57.256 37.500 0.00 0.00 46.34 3.51
4803 5588 9.952030 AAAGAACATAAAAGGTGAAAGGAAAAA 57.048 25.926 0.00 0.00 0.00 1.94
4839 5624 8.695456 ACAATGTTGATCAAAAAGGTAAGAACT 58.305 29.630 10.35 0.00 0.00 3.01
4840 5625 8.871686 ACAATGTTGATCAAAAAGGTAAGAAC 57.128 30.769 10.35 0.00 0.00 3.01
4889 5674 9.750125 CACTCTATGCATCTGTACTATGTTAAA 57.250 33.333 0.19 0.00 0.00 1.52
4911 5696 2.409651 CGCCGTAGAGGAGCACTC 59.590 66.667 0.53 0.53 46.98 3.51
4916 5701 0.039074 CATAAGGCGCCGTAGAGGAG 60.039 60.000 25.88 10.40 45.00 3.69
4917 5702 2.038690 CATAAGGCGCCGTAGAGGA 58.961 57.895 25.88 6.22 45.00 3.71
4918 5703 1.664965 GCATAAGGCGCCGTAGAGG 60.665 63.158 25.88 18.28 44.97 3.69
4919 5704 3.938112 GCATAAGGCGCCGTAGAG 58.062 61.111 25.88 20.79 0.00 2.43
4928 5713 2.709475 CGAACAGGCGCATAAGGC 59.291 61.111 10.83 0.00 39.90 4.35
4959 5744 3.574445 CATGAGAGGCTGCTGCGC 61.574 66.667 9.65 0.00 40.82 6.09
4960 5745 2.895865 CCATGAGAGGCTGCTGCG 60.896 66.667 9.65 0.00 40.82 5.18
4961 5746 2.516460 CCCATGAGAGGCTGCTGC 60.516 66.667 7.10 7.10 38.76 5.25
4980 5765 4.087892 AGTGTGCTAGCTGGGCCG 62.088 66.667 17.23 0.00 0.00 6.13
4981 5766 2.124942 GAGTGTGCTAGCTGGGCC 60.125 66.667 17.23 0.00 0.00 5.80
4982 5767 1.743252 GTGAGTGTGCTAGCTGGGC 60.743 63.158 17.23 0.81 0.00 5.36
4983 5768 1.446792 CGTGAGTGTGCTAGCTGGG 60.447 63.158 17.23 0.00 0.00 4.45
4984 5769 1.290324 ACGTGAGTGTGCTAGCTGG 59.710 57.895 17.23 0.00 46.97 4.85
4985 5770 4.974792 ACGTGAGTGTGCTAGCTG 57.025 55.556 17.23 0.00 46.97 4.24
5001 5786 1.393883 GAGCGATGGAGAACGGAAAAC 59.606 52.381 0.00 0.00 0.00 2.43
5002 5787 1.722011 GAGCGATGGAGAACGGAAAA 58.278 50.000 0.00 0.00 0.00 2.29
5003 5788 0.457853 CGAGCGATGGAGAACGGAAA 60.458 55.000 0.00 0.00 0.00 3.13
5004 5789 1.138883 CGAGCGATGGAGAACGGAA 59.861 57.895 0.00 0.00 0.00 4.30
5005 5790 2.798689 CGAGCGATGGAGAACGGA 59.201 61.111 0.00 0.00 0.00 4.69
5006 5791 2.956964 GCGAGCGATGGAGAACGG 60.957 66.667 0.00 0.00 0.00 4.44
5007 5792 1.941734 GAGCGAGCGATGGAGAACG 60.942 63.158 0.00 0.00 0.00 3.95
5008 5793 1.590259 GGAGCGAGCGATGGAGAAC 60.590 63.158 0.00 0.00 0.00 3.01
5009 5794 1.323271 AAGGAGCGAGCGATGGAGAA 61.323 55.000 0.00 0.00 0.00 2.87
5010 5795 1.729470 GAAGGAGCGAGCGATGGAGA 61.729 60.000 0.00 0.00 0.00 3.71
5011 5796 1.299773 GAAGGAGCGAGCGATGGAG 60.300 63.158 0.00 0.00 0.00 3.86
5012 5797 2.786495 GGAAGGAGCGAGCGATGGA 61.786 63.158 0.00 0.00 0.00 3.41
5013 5798 2.279784 GGAAGGAGCGAGCGATGG 60.280 66.667 0.00 0.00 0.00 3.51
5014 5799 2.279784 GGGAAGGAGCGAGCGATG 60.280 66.667 0.00 0.00 0.00 3.84
5015 5800 2.022240 GAAGGGAAGGAGCGAGCGAT 62.022 60.000 0.00 0.00 0.00 4.58
5016 5801 2.680352 AAGGGAAGGAGCGAGCGA 60.680 61.111 0.00 0.00 0.00 4.93
5017 5802 2.202810 GAAGGGAAGGAGCGAGCG 60.203 66.667 0.00 0.00 0.00 5.03
5018 5803 1.904990 AAGGAAGGGAAGGAGCGAGC 61.905 60.000 0.00 0.00 0.00 5.03
5019 5804 0.615850 AAAGGAAGGGAAGGAGCGAG 59.384 55.000 0.00 0.00 0.00 5.03
5020 5805 0.324943 CAAAGGAAGGGAAGGAGCGA 59.675 55.000 0.00 0.00 0.00 4.93
5021 5806 0.036875 ACAAAGGAAGGGAAGGAGCG 59.963 55.000 0.00 0.00 0.00 5.03
5022 5807 1.539157 CACAAAGGAAGGGAAGGAGC 58.461 55.000 0.00 0.00 0.00 4.70
5023 5808 1.202927 TGCACAAAGGAAGGGAAGGAG 60.203 52.381 0.00 0.00 0.00 3.69
5024 5809 0.850100 TGCACAAAGGAAGGGAAGGA 59.150 50.000 0.00 0.00 0.00 3.36
5025 5810 0.961753 GTGCACAAAGGAAGGGAAGG 59.038 55.000 13.17 0.00 0.00 3.46
5026 5811 0.593128 CGTGCACAAAGGAAGGGAAG 59.407 55.000 18.64 0.00 0.00 3.46
5027 5812 0.106918 ACGTGCACAAAGGAAGGGAA 60.107 50.000 18.64 0.00 0.00 3.97
5028 5813 0.106918 AACGTGCACAAAGGAAGGGA 60.107 50.000 18.64 0.00 0.00 4.20
5029 5814 0.744281 AAACGTGCACAAAGGAAGGG 59.256 50.000 18.64 0.00 0.00 3.95
5030 5815 1.596954 CGAAACGTGCACAAAGGAAGG 60.597 52.381 18.64 0.00 0.00 3.46
5031 5816 1.063469 ACGAAACGTGCACAAAGGAAG 59.937 47.619 18.64 0.40 39.18 3.46
5032 5817 1.088306 ACGAAACGTGCACAAAGGAA 58.912 45.000 18.64 0.00 39.18 3.36
5033 5818 1.062880 GAACGAAACGTGCACAAAGGA 59.937 47.619 18.64 0.00 39.99 3.36
5034 5819 1.462791 GAACGAAACGTGCACAAAGG 58.537 50.000 18.64 2.44 39.99 3.11
5035 5820 1.101454 CGAACGAAACGTGCACAAAG 58.899 50.000 18.64 2.84 39.99 2.77
5036 5821 0.443088 ACGAACGAAACGTGCACAAA 59.557 45.000 18.64 0.00 39.99 2.83
5037 5822 0.443088 AACGAACGAAACGTGCACAA 59.557 45.000 18.64 0.00 43.16 3.33
5038 5823 0.025256 GAACGAACGAAACGTGCACA 59.975 50.000 18.64 0.00 43.16 4.57
5039 5824 0.978684 CGAACGAACGAAACGTGCAC 60.979 55.000 6.82 6.82 43.16 4.57
5040 5825 1.270388 CGAACGAACGAAACGTGCA 59.730 52.632 0.14 0.00 43.16 4.57
5041 5826 0.314498 AACGAACGAACGAAACGTGC 60.314 50.000 11.97 0.00 43.16 5.34
5042 5827 1.253545 AGAACGAACGAACGAAACGTG 59.746 47.619 11.97 0.00 43.16 4.49
5043 5828 1.548986 AGAACGAACGAACGAAACGT 58.451 45.000 11.97 6.72 45.89 3.99
5044 5829 2.616117 AAGAACGAACGAACGAAACG 57.384 45.000 11.97 6.15 37.03 3.60
5067 5852 2.908916 ACGAAGGGACGAACAGAAAAA 58.091 42.857 0.00 0.00 37.03 1.94
5068 5853 2.607631 ACGAAGGGACGAACAGAAAA 57.392 45.000 0.00 0.00 37.03 2.29
5069 5854 2.159071 TGAACGAAGGGACGAACAGAAA 60.159 45.455 0.00 0.00 37.03 2.52
5070 5855 1.409790 TGAACGAAGGGACGAACAGAA 59.590 47.619 0.00 0.00 37.03 3.02
5071 5856 1.034356 TGAACGAAGGGACGAACAGA 58.966 50.000 0.00 0.00 37.03 3.41
5072 5857 1.137513 GTGAACGAAGGGACGAACAG 58.862 55.000 0.00 0.00 37.03 3.16
5073 5858 0.460722 TGTGAACGAAGGGACGAACA 59.539 50.000 0.00 0.00 37.03 3.18
5074 5859 1.574134 TTGTGAACGAAGGGACGAAC 58.426 50.000 0.00 0.00 37.03 3.95
5075 5860 2.312722 TTTGTGAACGAAGGGACGAA 57.687 45.000 0.00 0.00 37.03 3.85
5076 5861 1.935199 GTTTTGTGAACGAAGGGACGA 59.065 47.619 0.00 0.00 37.03 4.20
5077 5862 1.937899 AGTTTTGTGAACGAAGGGACG 59.062 47.619 0.00 0.00 39.31 4.79
5078 5863 2.940410 TCAGTTTTGTGAACGAAGGGAC 59.060 45.455 0.00 0.00 0.00 4.46
5079 5864 3.269538 TCAGTTTTGTGAACGAAGGGA 57.730 42.857 0.00 0.00 0.00 4.20
5080 5865 4.351192 CTTTCAGTTTTGTGAACGAAGGG 58.649 43.478 0.00 0.00 36.15 3.95
5081 5866 3.791353 GCTTTCAGTTTTGTGAACGAAGG 59.209 43.478 0.00 0.00 36.15 3.46
5082 5867 4.411327 TGCTTTCAGTTTTGTGAACGAAG 58.589 39.130 0.00 0.00 36.15 3.79
5083 5868 4.427096 TGCTTTCAGTTTTGTGAACGAA 57.573 36.364 0.00 0.00 36.15 3.85
5084 5869 4.630894 ATGCTTTCAGTTTTGTGAACGA 57.369 36.364 0.00 0.00 36.15 3.85
5085 5870 8.500837 TTTATATGCTTTCAGTTTTGTGAACG 57.499 30.769 0.00 0.00 36.15 3.95
5088 5873 9.474920 CCTTTTTATATGCTTTCAGTTTTGTGA 57.525 29.630 0.00 0.00 0.00 3.58
5089 5874 9.474920 TCCTTTTTATATGCTTTCAGTTTTGTG 57.525 29.630 0.00 0.00 0.00 3.33
5090 5875 9.476202 GTCCTTTTTATATGCTTTCAGTTTTGT 57.524 29.630 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.