AutoCloner

Multiple sequence alignment - TraesCS2B01G239900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2B01G239900	chr2B	100.000	3315	0	0	2750	6064	244531776	244535090	0.000000e+00	6122.0
1	TraesCS2B01G239900	chr2B	100.000	2539	0	0	1	2539	244529027	244531565	0.000000e+00	4689.0
2	TraesCS2B01G239900	chr2B	100.000	54	0	0	2417	2470	244531390	244531443	3.870000e-17	100.0
3	TraesCS2B01G239900	chr2B	100.000	54	0	0	2364	2417	244531443	244531496	3.870000e-17	100.0
4	TraesCS2B01G239900	chr2D	94.444	3276	140	15	2750	6004	188428830	188432084	0.000000e+00	5003.0
5	TraesCS2B01G239900	chr2D	92.867	715	33	6	1669	2379	188427735	188428435	0.000000e+00	1022.0
6	TraesCS2B01G239900	chr2D	94.118	663	22	3	906	1554	188426732	188427391	0.000000e+00	992.0
7	TraesCS2B01G239900	chr2D	100.000	63	0	0	6002	6064	188432208	188432270	3.840000e-22	117.0
8	TraesCS2B01G239900	chr2D	95.385	65	3	0	1554	1618	188427430	188427494	2.990000e-18	104.0
9	TraesCS2B01G239900	chr2A	95.780	1635	65	4	2750	4382	202038007	202039639	0.000000e+00	2634.0
10	TraesCS2B01G239900	chr2A	96.255	1175	39	4	4372	5544	202040270	202041441	0.000000e+00	1921.0
11	TraesCS2B01G239900	chr2A	92.747	910	41	11	1512	2417	202036941	202037829	0.000000e+00	1291.0
12	TraesCS2B01G239900	chr2A	95.669	531	17	1	907	1431	202036069	202036599	0.000000e+00	848.0
13	TraesCS2B01G239900	chr2A	95.446	527	20	3	5541	6064	202041544	202042069	0.000000e+00	837.0
14	TraesCS2B01G239900	chr2A	93.600	125	5	2	2417	2538	202037775	202037899	3.730000e-42	183.0
15	TraesCS2B01G239900	chr2A	84.314	102	11	4	1672	1772	55565778	55565681	1.800000e-15	95.3
16	TraesCS2B01G239900	chr5B	96.344	547	17	2	1	544	44007418	44007964	0.000000e+00	896.0
17	TraesCS2B01G239900	chr5B	89.474	76	6	2	1695	1769	355601153	355601227	1.800000e-15	95.3
18	TraesCS2B01G239900	chr5B	84.000	100	9	6	1673	1769	271145790	271145885	8.370000e-14	89.8
19	TraesCS2B01G239900	chr1B	95.943	419	16	1	1	418	59547935	59547517	0.000000e+00	678.0
20	TraesCS2B01G239900	chr1B	99.007	302	3	0	586	887	615498839	615499140	5.350000e-150	542.0
21	TraesCS2B01G239900	chr1B	97.778	135	1	2	414	547	59547159	59547026	1.310000e-56	231.0
22	TraesCS2B01G239900	chr1A	99.670	303	1	0	586	888	84441853	84442155	6.870000e-154	555.0
23	TraesCS2B01G239900	chr7B	99.331	299	2	0	586	884	332926437	332926735	5.350000e-150	542.0
24	TraesCS2B01G239900	chrUn	92.667	300	18	2	586	885	92145958	92145663	4.340000e-116	429.0
25	TraesCS2B01G239900	chr3A	94.030	268	13	2	586	851	718559552	718559818	2.630000e-108	403.0
26	TraesCS2B01G239900	chr3A	92.424	66	1	4	1684	1747	54716866	54716929	2.330000e-14	91.6
27	TraesCS2B01G239900	chr3B	92.800	125	9	0	587	711	734140450	734140326	1.340000e-41	182.0
28	TraesCS2B01G239900	chr6A	87.654	81	6	3	1695	1774	448702220	448702143	2.330000e-14	91.6
29	TraesCS2B01G239900	chr3D	83.158	95	10	6	1695	1784	592003231	592003138	1.400000e-11	82.4
30	TraesCS2B01G239900	chr3D	100.000	28	0	0	1086	1113	278788079	278788052	1.100000e-02	52.8
31	TraesCS2B01G239900	chr6D	84.524	84	7	5	1693	1774	32062236	32062157	1.810000e-10	78.7

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2B01G239900	chr2B	244529027	244535090	6063	False	2752.750000	6122	100.000000	1	6064	4	chr2B.!!$F1	6063
1	TraesCS2B01G239900	chr2D	188426732	188432270	5538	False	1447.600000	5003	95.362800	906	6064	5	chr2D.!!$F1	5158
2	TraesCS2B01G239900	chr2A	202036069	202042069	6000	False	1285.666667	2634	94.916167	907	6064	6	chr2A.!!$F1	5157
3	TraesCS2B01G239900	chr5B	44007418	44007964	546	False	896.000000	896	96.344000	1	544	1	chr5B.!!$F1	543
4	TraesCS2B01G239900	chr1B	59547026	59547935	909	True	454.500000	678	96.860500	1	547	2	chr1B.!!$R1	546

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
801	804	0.035343	GGTGGGGCTCAGTTTACCTC	60.035	60.000	0.00	0.00	0.00	3.85	F
1888	2390	0.034670	GGCTGAGAGCTTTGGACCAT	60.035	55.000	0.00	0.00	41.99	3.55	F
2409	2926	0.337428	TAGATAGGATACCGGGGGCC	59.663	60.000	6.32	3.08	37.17	5.80	F
3049	3701	0.457035	GACGTACGGGTTGATAGCCA	59.543	55.000	21.06	0.00	42.23	4.75	F
4064	4724	1.546773	GGGGTGCTTGTACATGGTCAA	60.547	52.381	10.47	1.14	0.00	3.18	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
2163	2668	0.105224	TCAACGAGGGCAGTTTCGAA	59.895	50.0	0.00	39.93	3.71	R
3031	3677	0.174162	GTGGCTATCAACCCGTACGT	59.826	55.0	15.21	0.00	3.57	R
4292	4953	0.034337	CAGCTTTGCACTGGCCAAAT	59.966	50.0	7.01	40.13	2.32	R
4721	6023	0.387622	CAGCTTTGTCAATGCACCGG	60.388	55.0	21.56	34.29	5.28	R
5340	6642	0.108186	TACTTCAGTCTGCCATGCCG	60.108	55.0	0.00	0.00	5.69	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
85	86	0.530744	GCCGTCAGTAGTCACCATGA	59.469	55.000	0.00	0.00	0.00	3.07
125	126	0.763604	TCCCTGGACACCGGTTACAA	60.764	55.000	2.97	0.00	0.00	2.41
207	208	3.822192	CATCTCGCCGTCCCGTCA	61.822	66.667	0.00	0.00	0.00	4.35
280	283	1.617018	CGCAGATGGTGAGGAGGGAA	61.617	60.000	0.00	0.00	0.00	3.97
314	317	2.507484	CCACTGCAACATGAGGAAGAA	58.493	47.619	0.00	0.00	0.00	2.52
360	363	2.682155	AAGAAAGGAGATGCTCGTCC	57.318	50.000	0.00	0.00	0.00	4.79
361	364	1.561643	AGAAAGGAGATGCTCGTCCA	58.438	50.000	2.28	0.00	35.02	4.02
362	365	2.114616	AGAAAGGAGATGCTCGTCCAT	58.885	47.619	2.28	0.00	35.02	3.41
363	366	2.158986	AGAAAGGAGATGCTCGTCCATG	60.159	50.000	2.28	0.00	35.02	3.66
364	367	0.467384	AAGGAGATGCTCGTCCATGG	59.533	55.000	4.97	4.97	35.02	3.66
365	368	1.596477	GGAGATGCTCGTCCATGGC	60.596	63.158	6.96	0.96	32.55	4.40
366	369	1.144716	GAGATGCTCGTCCATGGCA	59.855	57.895	6.96	0.65	40.32	4.92
367	370	0.879400	GAGATGCTCGTCCATGGCAG	60.879	60.000	6.96	3.12	39.38	4.85
368	371	2.515523	ATGCTCGTCCATGGCAGC	60.516	61.111	18.49	18.49	39.38	5.25
369	372	4.783621	TGCTCGTCCATGGCAGCC	62.784	66.667	21.06	3.66	0.00	4.85
370	373	4.479993	GCTCGTCCATGGCAGCCT	62.480	66.667	14.15	0.00	0.00	4.58
371	374	2.202987	CTCGTCCATGGCAGCCTC	60.203	66.667	14.15	0.00	0.00	4.70
372	375	4.147449	TCGTCCATGGCAGCCTCG	62.147	66.667	14.15	9.70	0.00	4.63
373	376	4.147449	CGTCCATGGCAGCCTCGA	62.147	66.667	14.15	2.04	0.00	4.04
374	377	2.202987	GTCCATGGCAGCCTCGAG	60.203	66.667	14.15	5.13	0.00	4.04
375	378	2.364186	TCCATGGCAGCCTCGAGA	60.364	61.111	15.71	1.24	0.00	4.04
376	379	2.108566	CCATGGCAGCCTCGAGAG	59.891	66.667	15.71	5.19	0.00	3.20
377	380	2.429767	CCATGGCAGCCTCGAGAGA	61.430	63.158	15.71	0.00	39.12	3.10
378	381	1.519246	CATGGCAGCCTCGAGAGAA	59.481	57.895	15.71	0.00	41.32	2.87
379	382	0.107993	CATGGCAGCCTCGAGAGAAA	60.108	55.000	15.71	0.00	41.32	2.52
380	383	0.615331	ATGGCAGCCTCGAGAGAAAA	59.385	50.000	15.71	0.00	41.32	2.29
381	384	0.396435	TGGCAGCCTCGAGAGAAAAA	59.604	50.000	15.71	0.00	41.32	1.94
382	385	1.082690	GGCAGCCTCGAGAGAAAAAG	58.917	55.000	15.71	0.00	41.32	2.27
383	386	0.445829	GCAGCCTCGAGAGAAAAAGC	59.554	55.000	15.71	6.74	41.32	3.51
384	387	1.800805	CAGCCTCGAGAGAAAAAGCA	58.199	50.000	15.71	0.00	41.32	3.91
385	388	2.146342	CAGCCTCGAGAGAAAAAGCAA	58.854	47.619	15.71	0.00	41.32	3.91
386	389	2.549754	CAGCCTCGAGAGAAAAAGCAAA	59.450	45.455	15.71	0.00	41.32	3.68
387	390	2.810852	AGCCTCGAGAGAAAAAGCAAAG	59.189	45.455	15.71	0.00	41.32	2.77
388	391	2.095516	GCCTCGAGAGAAAAAGCAAAGG	60.096	50.000	15.71	0.00	41.32	3.11
389	392	3.403038	CCTCGAGAGAAAAAGCAAAGGA	58.597	45.455	15.71	0.00	41.32	3.36
390	393	3.434984	CCTCGAGAGAAAAAGCAAAGGAG	59.565	47.826	15.71	0.00	41.32	3.69
391	394	4.310769	CTCGAGAGAAAAAGCAAAGGAGA	58.689	43.478	6.58	0.00	41.32	3.71
392	395	4.310769	TCGAGAGAAAAAGCAAAGGAGAG	58.689	43.478	0.00	0.00	37.03	3.20
393	396	4.039245	TCGAGAGAAAAAGCAAAGGAGAGA	59.961	41.667	0.00	0.00	37.03	3.10
394	397	4.752101	CGAGAGAAAAAGCAAAGGAGAGAA	59.248	41.667	0.00	0.00	0.00	2.87
395	398	5.107143	CGAGAGAAAAAGCAAAGGAGAGAAG	60.107	44.000	0.00	0.00	0.00	2.85
396	399	5.069318	AGAGAAAAAGCAAAGGAGAGAAGG	58.931	41.667	0.00	0.00	0.00	3.46
397	400	5.053978	AGAAAAAGCAAAGGAGAGAAGGA	57.946	39.130	0.00	0.00	0.00	3.36
398	401	5.449553	AGAAAAAGCAAAGGAGAGAAGGAA	58.550	37.500	0.00	0.00	0.00	3.36
399	402	5.534278	AGAAAAAGCAAAGGAGAGAAGGAAG	59.466	40.000	0.00	0.00	0.00	3.46
400	403	4.713792	AAAGCAAAGGAGAGAAGGAAGA	57.286	40.909	0.00	0.00	0.00	2.87
401	404	3.979101	AGCAAAGGAGAGAAGGAAGAG	57.021	47.619	0.00	0.00	0.00	2.85
402	405	3.515562	AGCAAAGGAGAGAAGGAAGAGA	58.484	45.455	0.00	0.00	0.00	3.10
403	406	3.515104	AGCAAAGGAGAGAAGGAAGAGAG	59.485	47.826	0.00	0.00	0.00	3.20
404	407	3.369366	GCAAAGGAGAGAAGGAAGAGAGG	60.369	52.174	0.00	0.00	0.00	3.69
405	408	4.093011	CAAAGGAGAGAAGGAAGAGAGGA	58.907	47.826	0.00	0.00	0.00	3.71
406	409	4.412060	AAGGAGAGAAGGAAGAGAGGAA	57.588	45.455	0.00	0.00	0.00	3.36
407	410	3.981212	AGGAGAGAAGGAAGAGAGGAAG	58.019	50.000	0.00	0.00	0.00	3.46
408	411	3.596046	AGGAGAGAAGGAAGAGAGGAAGA	59.404	47.826	0.00	0.00	0.00	2.87
409	412	4.045334	AGGAGAGAAGGAAGAGAGGAAGAA	59.955	45.833	0.00	0.00	0.00	2.52
410	413	4.402474	GGAGAGAAGGAAGAGAGGAAGAAG	59.598	50.000	0.00	0.00	0.00	2.85
411	414	5.261216	GAGAGAAGGAAGAGAGGAAGAAGA	58.739	45.833	0.00	0.00	0.00	2.87
412	415	5.650283	AGAGAAGGAAGAGAGGAAGAAGAA	58.350	41.667	0.00	0.00	0.00	2.52
413	416	5.480422	AGAGAAGGAAGAGAGGAAGAAGAAC	59.520	44.000	0.00	0.00	0.00	3.01
414	417	5.151454	AGAAGGAAGAGAGGAAGAAGAACA	58.849	41.667	0.00	0.00	0.00	3.18
415	418	5.604650	AGAAGGAAGAGAGGAAGAAGAACAA	59.395	40.000	0.00	0.00	0.00	2.83
416	419	5.482163	AGGAAGAGAGGAAGAAGAACAAG	57.518	43.478	0.00	0.00	0.00	3.16
417	420	4.285775	AGGAAGAGAGGAAGAAGAACAAGG	59.714	45.833	0.00	0.00	0.00	3.61
418	421	4.284746	GGAAGAGAGGAAGAAGAACAAGGA	59.715	45.833	0.00	0.00	0.00	3.36
419	422	5.221742	GGAAGAGAGGAAGAAGAACAAGGAA	60.222	44.000	0.00	0.00	0.00	3.36
420	423	6.446909	AAGAGAGGAAGAAGAACAAGGAAT	57.553	37.500	0.00	0.00	0.00	3.01
421	424	5.803552	AGAGAGGAAGAAGAACAAGGAATG	58.196	41.667	0.00	0.00	0.00	2.67
422	425	5.545723	AGAGAGGAAGAAGAACAAGGAATGA	59.454	40.000	0.00	0.00	0.00	2.57
423	426	5.803552	AGAGGAAGAAGAACAAGGAATGAG	58.196	41.667	0.00	0.00	0.00	2.90
424	427	5.309282	AGAGGAAGAAGAACAAGGAATGAGT	59.691	40.000	0.00	0.00	0.00	3.41
425	428	5.312079	AGGAAGAAGAACAAGGAATGAGTG	58.688	41.667	0.00	0.00	0.00	3.51
426	429	4.457257	GGAAGAAGAACAAGGAATGAGTGG	59.543	45.833	0.00	0.00	0.00	4.00
427	430	4.982241	AGAAGAACAAGGAATGAGTGGA	57.018	40.909	0.00	0.00	0.00	4.02
428	431	5.511386	AGAAGAACAAGGAATGAGTGGAT	57.489	39.130	0.00	0.00	0.00	3.41
429	432	5.251764	AGAAGAACAAGGAATGAGTGGATG	58.748	41.667	0.00	0.00	0.00	3.51
430	433	3.960571	AGAACAAGGAATGAGTGGATGG	58.039	45.455	0.00	0.00	0.00	3.51
431	434	2.814805	ACAAGGAATGAGTGGATGGG	57.185	50.000	0.00	0.00	0.00	4.00
432	435	2.278245	ACAAGGAATGAGTGGATGGGA	58.722	47.619	0.00	0.00	0.00	4.37
433	436	2.649312	ACAAGGAATGAGTGGATGGGAA	59.351	45.455	0.00	0.00	0.00	3.97
434	437	3.285484	CAAGGAATGAGTGGATGGGAAG	58.715	50.000	0.00	0.00	0.00	3.46
435	438	2.850833	AGGAATGAGTGGATGGGAAGA	58.149	47.619	0.00	0.00	0.00	2.87
436	439	3.192944	AGGAATGAGTGGATGGGAAGAA	58.807	45.455	0.00	0.00	0.00	2.52
437	440	3.201708	AGGAATGAGTGGATGGGAAGAAG	59.798	47.826	0.00	0.00	0.00	2.85
438	441	3.054065	GGAATGAGTGGATGGGAAGAAGT	60.054	47.826	0.00	0.00	0.00	3.01
439	442	3.922171	ATGAGTGGATGGGAAGAAGTC	57.078	47.619	0.00	0.00	0.00	3.01
440	443	2.907892	TGAGTGGATGGGAAGAAGTCT	58.092	47.619	0.00	0.00	0.00	3.24
441	444	4.061131	TGAGTGGATGGGAAGAAGTCTA	57.939	45.455	0.00	0.00	0.00	2.59
442	445	4.425772	TGAGTGGATGGGAAGAAGTCTAA	58.574	43.478	0.00	0.00	0.00	2.10
443	446	4.844085	TGAGTGGATGGGAAGAAGTCTAAA	59.156	41.667	0.00	0.00	0.00	1.85
444	447	5.046304	TGAGTGGATGGGAAGAAGTCTAAAG	60.046	44.000	0.00	0.00	0.00	1.85
445	448	5.094387	AGTGGATGGGAAGAAGTCTAAAGA	58.906	41.667	0.00	0.00	0.00	2.52
446	449	5.188751	AGTGGATGGGAAGAAGTCTAAAGAG	59.811	44.000	0.00	0.00	0.00	2.85
447	450	5.187967	GTGGATGGGAAGAAGTCTAAAGAGA	59.812	44.000	0.00	0.00	0.00	3.10
448	451	5.966935	TGGATGGGAAGAAGTCTAAAGAGAT	59.033	40.000	0.00	0.00	33.14	2.75
449	452	7.070074	GTGGATGGGAAGAAGTCTAAAGAGATA	59.930	40.741	0.00	0.00	33.14	1.98
450	453	7.623677	TGGATGGGAAGAAGTCTAAAGAGATAA	59.376	37.037	0.00	0.00	33.14	1.75
451	454	8.487028	GGATGGGAAGAAGTCTAAAGAGATAAA	58.513	37.037	0.00	0.00	33.14	1.40
452	455	9.541143	GATGGGAAGAAGTCTAAAGAGATAAAG	57.459	37.037	0.00	0.00	33.14	1.85
453	456	8.437274	TGGGAAGAAGTCTAAAGAGATAAAGT	57.563	34.615	0.00	0.00	33.14	2.66
454	457	8.881262	TGGGAAGAAGTCTAAAGAGATAAAGTT	58.119	33.333	0.00	0.00	33.14	2.66
470	473	8.966069	AGATAAAGTTAAGAGGAAACTATGGC	57.034	34.615	0.00	0.00	44.43	4.40
471	474	7.993758	AGATAAAGTTAAGAGGAAACTATGGCC	59.006	37.037	0.00	0.00	44.43	5.36
472	475	4.505324	AGTTAAGAGGAAACTATGGCCC	57.495	45.455	0.00	0.00	44.43	5.80
473	476	3.850173	AGTTAAGAGGAAACTATGGCCCA	59.150	43.478	0.00	0.00	44.43	5.36
474	477	2.808906	AAGAGGAAACTATGGCCCAC	57.191	50.000	0.00	0.00	44.43	4.61
475	478	1.668826	AGAGGAAACTATGGCCCACA	58.331	50.000	0.00	0.00	44.43	4.17
476	479	1.282157	AGAGGAAACTATGGCCCACAC	59.718	52.381	0.00	0.00	44.43	3.82
477	480	1.004277	GAGGAAACTATGGCCCACACA	59.996	52.381	0.00	0.00	44.43	3.72
478	481	1.427368	AGGAAACTATGGCCCACACAA	59.573	47.619	0.00	0.00	40.61	3.33
479	482	1.544246	GGAAACTATGGCCCACACAAC	59.456	52.381	0.00	0.00	0.00	3.32
480	483	2.235016	GAAACTATGGCCCACACAACA	58.765	47.619	0.00	0.00	0.00	3.33
481	484	2.373335	AACTATGGCCCACACAACAA	57.627	45.000	0.00	0.00	0.00	2.83
482	485	2.373335	ACTATGGCCCACACAACAAA	57.627	45.000	0.00	0.00	0.00	2.83
483	486	1.960689	ACTATGGCCCACACAACAAAC	59.039	47.619	0.00	0.00	0.00	2.93
484	487	1.959985	CTATGGCCCACACAACAAACA	59.040	47.619	0.00	0.00	0.00	2.83
485	488	0.463620	ATGGCCCACACAACAAACAC	59.536	50.000	0.00	0.00	0.00	3.32
486	489	1.226831	GGCCCACACAACAAACACG	60.227	57.895	0.00	0.00	0.00	4.49
487	490	1.876263	GCCCACACAACAAACACGC	60.876	57.895	0.00	0.00	0.00	5.34
488	491	1.806568	CCCACACAACAAACACGCT	59.193	52.632	0.00	0.00	0.00	5.07
489	492	0.525242	CCCACACAACAAACACGCTG	60.525	55.000	0.00	0.00	0.00	5.18
490	493	1.139226	CCACACAACAAACACGCTGC	61.139	55.000	0.00	0.00	0.00	5.25
491	494	1.226267	ACACAACAAACACGCTGCG	60.226	52.632	21.91	21.91	0.00	5.18
492	495	1.226267	CACAACAAACACGCTGCGT	60.226	52.632	23.57	23.57	42.36	5.24
493	496	0.796491	CACAACAAACACGCTGCGTT	60.796	50.000	26.77	14.08	38.32	4.84
494	497	0.796491	ACAACAAACACGCTGCGTTG	60.796	50.000	26.77	22.88	38.32	4.10
495	498	1.871789	AACAAACACGCTGCGTTGC	60.872	52.632	26.77	0.00	38.32	4.17
496	499	2.277820	CAAACACGCTGCGTTGCA	60.278	55.556	26.77	0.00	38.32	4.08
497	500	1.658102	CAAACACGCTGCGTTGCAT	60.658	52.632	26.77	9.29	38.32	3.96
498	501	1.658102	AAACACGCTGCGTTGCATG	60.658	52.632	26.77	16.25	38.32	4.06
499	502	4.688419	ACACGCTGCGTTGCATGC	62.688	61.111	26.77	11.82	38.32	4.06
517	520	4.050934	GGCCGGCCGAAAACTTGG	62.051	66.667	33.60	8.26	0.00	3.61
522	525	3.292159	GCCGAAAACTTGGCCGGT	61.292	61.111	1.90	0.00	45.73	5.28
523	526	2.951458	CCGAAAACTTGGCCGGTC	59.049	61.111	0.00	0.00	37.40	4.79
524	527	2.622962	CCGAAAACTTGGCCGGTCC	61.623	63.158	2.12	5.67	37.40	4.46
525	528	2.951458	GAAAACTTGGCCGGTCCG	59.049	61.111	2.12	3.60	37.80	4.79
526	529	3.263503	GAAAACTTGGCCGGTCCGC	62.264	63.158	2.12	1.02	37.80	5.54
541	544	3.656045	CGCCGGCCAGAAACGTTT	61.656	61.111	23.46	14.57	0.00	3.60
542	545	2.254350	GCCGGCCAGAAACGTTTC	59.746	61.111	29.36	29.36	37.45	2.78
543	546	2.951458	CCGGCCAGAAACGTTTCC	59.049	61.111	31.87	19.32	37.92	3.13
544	547	1.599797	CCGGCCAGAAACGTTTCCT	60.600	57.895	31.87	19.03	37.92	3.36
545	548	1.170290	CCGGCCAGAAACGTTTCCTT	61.170	55.000	31.87	15.97	37.92	3.36
546	549	1.515081	CGGCCAGAAACGTTTCCTTA	58.485	50.000	31.87	0.00	37.92	2.69
547	550	2.081462	CGGCCAGAAACGTTTCCTTAT	58.919	47.619	31.87	14.94	37.92	1.73
548	551	3.264104	CGGCCAGAAACGTTTCCTTATA	58.736	45.455	31.87	0.00	37.92	0.98
549	552	3.875134	CGGCCAGAAACGTTTCCTTATAT	59.125	43.478	31.87	13.90	37.92	0.86
550	553	4.334481	CGGCCAGAAACGTTTCCTTATATT	59.666	41.667	31.87	13.21	37.92	1.28
551	554	5.163693	CGGCCAGAAACGTTTCCTTATATTT	60.164	40.000	31.87	12.52	37.92	1.40
552	555	6.624204	CGGCCAGAAACGTTTCCTTATATTTT	60.624	38.462	31.87	11.85	37.92	1.82
553	556	6.750501	GGCCAGAAACGTTTCCTTATATTTTC	59.249	38.462	31.87	8.56	37.92	2.29
554	557	7.362660	GGCCAGAAACGTTTCCTTATATTTTCT	60.363	37.037	31.87	10.68	37.92	2.52
555	558	7.696872	GCCAGAAACGTTTCCTTATATTTTCTC	59.303	37.037	31.87	7.94	37.92	2.87
556	559	8.182227	CCAGAAACGTTTCCTTATATTTTCTCC	58.818	37.037	31.87	7.19	37.92	3.71
557	560	8.947115	CAGAAACGTTTCCTTATATTTTCTCCT	58.053	33.333	31.87	9.49	37.92	3.69
558	561	9.516546	AGAAACGTTTCCTTATATTTTCTCCTT	57.483	29.630	31.87	9.13	37.92	3.36
559	562	9.770503	GAAACGTTTCCTTATATTTTCTCCTTC	57.229	33.333	27.01	0.00	0.00	3.46
560	563	7.860918	ACGTTTCCTTATATTTTCTCCTTCC	57.139	36.000	0.00	0.00	0.00	3.46
561	564	7.631007	ACGTTTCCTTATATTTTCTCCTTCCT	58.369	34.615	0.00	0.00	0.00	3.36
562	565	8.765517	ACGTTTCCTTATATTTTCTCCTTCCTA	58.234	33.333	0.00	0.00	0.00	2.94
563	566	9.780186	CGTTTCCTTATATTTTCTCCTTCCTAT	57.220	33.333	0.00	0.00	0.00	2.57
578	581	9.950496	TCTCCTTCCTATCAATAAAAGATATGC	57.050	33.333	0.00	0.00	0.00	3.14
579	582	8.777865	TCCTTCCTATCAATAAAAGATATGCG	57.222	34.615	0.00	0.00	0.00	4.73
580	583	8.593679	TCCTTCCTATCAATAAAAGATATGCGA	58.406	33.333	0.00	0.00	0.00	5.10
581	584	8.877779	CCTTCCTATCAATAAAAGATATGCGAG	58.122	37.037	0.00	0.00	0.00	5.03
582	585	7.834068	TCCTATCAATAAAAGATATGCGAGC	57.166	36.000	0.00	0.00	0.00	5.03
583	586	7.615403	TCCTATCAATAAAAGATATGCGAGCT	58.385	34.615	0.00	0.00	0.00	4.09
584	587	8.097038	TCCTATCAATAAAAGATATGCGAGCTT	58.903	33.333	0.00	0.00	34.42	3.74
585	588	8.386606	CCTATCAATAAAAGATATGCGAGCTTC	58.613	37.037	0.00	0.00	30.67	3.86
586	589	6.215477	TCAATAAAAGATATGCGAGCTTCG	57.785	37.500	0.00	0.00	43.89	3.79
587	590	5.177511	TCAATAAAAGATATGCGAGCTTCGG	59.822	40.000	7.50	0.00	40.84	4.30
588	591	2.890808	AAAGATATGCGAGCTTCGGA	57.109	45.000	7.50	5.20	45.91	4.55
589	592	2.890808	AAGATATGCGAGCTTCGGAA	57.109	45.000	4.18	0.00	44.81	4.30
590	593	2.890808	AGATATGCGAGCTTCGGAAA	57.109	45.000	4.18	0.00	44.81	3.13
591	594	3.393089	AGATATGCGAGCTTCGGAAAT	57.607	42.857	4.18	0.00	44.81	2.17
592	595	3.062763	AGATATGCGAGCTTCGGAAATG	58.937	45.455	4.18	0.00	44.81	2.32
593	596	0.937304	TATGCGAGCTTCGGAAATGC	59.063	50.000	4.18	0.00	44.81	3.56
594	597	0.745845	ATGCGAGCTTCGGAAATGCT	60.746	50.000	4.36	4.36	44.81	3.79
595	598	1.349973	GCGAGCTTCGGAAATGCTC	59.650	57.895	17.43	17.43	46.73	4.26
597	600	3.467776	GAGCTTCGGAAATGCTCCT	57.532	52.632	16.86	0.00	45.12	3.69
598	601	1.743996	GAGCTTCGGAAATGCTCCTT	58.256	50.000	16.86	0.00	45.12	3.36
599	602	1.668237	GAGCTTCGGAAATGCTCCTTC	59.332	52.381	16.86	0.00	45.12	3.46
600	603	0.375106	GCTTCGGAAATGCTCCTTCG	59.625	55.000	0.00	0.00	42.85	3.79
601	604	0.375106	CTTCGGAAATGCTCCTTCGC	59.625	55.000	0.00	0.00	42.85	4.70
602	605	0.321210	TTCGGAAATGCTCCTTCGCA	60.321	50.000	0.00	0.00	42.85	5.10
603	606	1.019278	TCGGAAATGCTCCTTCGCAC	61.019	55.000	0.00	0.00	43.61	5.34
604	607	1.425428	GGAAATGCTCCTTCGCACG	59.575	57.895	0.00	0.00	43.61	5.34
605	608	1.226128	GAAATGCTCCTTCGCACGC	60.226	57.895	0.00	0.00	43.61	5.34
606	609	2.886512	GAAATGCTCCTTCGCACGCG	62.887	60.000	3.53	3.53	43.61	6.01
628	631	3.969795	GTTGGAACGAGCGATTTCC	57.030	52.632	0.00	0.00	41.62	3.13
629	632	1.439679	GTTGGAACGAGCGATTTCCT	58.560	50.000	5.78	0.00	41.76	3.36
630	633	1.804748	GTTGGAACGAGCGATTTCCTT	59.195	47.619	5.78	0.00	41.76	3.36
631	634	1.722011	TGGAACGAGCGATTTCCTTC	58.278	50.000	5.78	0.00	41.76	3.46
632	635	1.007580	GGAACGAGCGATTTCCTTCC	58.992	55.000	0.00	0.00	38.65	3.46
633	636	1.674817	GGAACGAGCGATTTCCTTCCA	60.675	52.381	0.00	0.00	38.65	3.53
634	637	1.393883	GAACGAGCGATTTCCTTCCAC	59.606	52.381	0.00	0.00	0.00	4.02
635	638	0.736325	ACGAGCGATTTCCTTCCACG	60.736	55.000	0.00	0.00	0.00	4.94
637	640	2.399611	GCGATTTCCTTCCACGCG	59.600	61.111	3.53	3.53	39.90	6.01
638	641	2.388232	GCGATTTCCTTCCACGCGT	61.388	57.895	5.58	5.58	39.90	6.01
639	642	1.908066	GCGATTTCCTTCCACGCGTT	61.908	55.000	10.22	0.00	39.90	4.84
640	643	0.179225	CGATTTCCTTCCACGCGTTG	60.179	55.000	10.22	6.47	0.00	4.10
641	644	0.872388	GATTTCCTTCCACGCGTTGT	59.128	50.000	10.22	0.00	0.00	3.32
642	645	0.872388	ATTTCCTTCCACGCGTTGTC	59.128	50.000	10.22	0.00	0.00	3.18
643	646	1.492319	TTTCCTTCCACGCGTTGTCG	61.492	55.000	10.22	0.00	40.37	4.35
644	647	3.411351	CCTTCCACGCGTTGTCGG	61.411	66.667	10.22	8.28	37.56	4.79
645	648	2.660552	CTTCCACGCGTTGTCGGT	60.661	61.111	10.22	0.00	37.56	4.69
646	649	2.654912	CTTCCACGCGTTGTCGGTC	61.655	63.158	10.22	0.00	37.56	4.79
647	650	4.986587	TCCACGCGTTGTCGGTCG	62.987	66.667	10.22	0.00	37.56	4.79
654	657	3.998672	GTTGTCGGTCGCCAGGGA	61.999	66.667	0.00	0.00	0.00	4.20
655	658	3.998672	TTGTCGGTCGCCAGGGAC	61.999	66.667	6.32	6.32	36.18	4.46
657	660	4.436998	GTCGGTCGCCAGGGACAG	62.437	72.222	15.64	12.01	38.70	3.51
658	661	4.671590	TCGGTCGCCAGGGACAGA	62.672	66.667	15.64	13.98	38.51	3.41
659	662	3.691342	CGGTCGCCAGGGACAGAA	61.691	66.667	15.64	0.00	38.70	3.02
660	663	2.266055	GGTCGCCAGGGACAGAAG	59.734	66.667	15.64	0.00	38.70	2.85
661	664	2.266055	GTCGCCAGGGACAGAAGG	59.734	66.667	9.73	0.00	36.91	3.46
662	665	3.003173	TCGCCAGGGACAGAAGGG	61.003	66.667	0.00	0.00	0.00	3.95
663	666	4.785453	CGCCAGGGACAGAAGGGC	62.785	72.222	0.00	0.00	41.20	5.19
664	667	4.432741	GCCAGGGACAGAAGGGCC	62.433	72.222	0.00	0.00	38.70	5.80
665	668	3.732849	CCAGGGACAGAAGGGCCC	61.733	72.222	16.46	16.46	42.37	5.80
666	669	2.935481	CAGGGACAGAAGGGCCCA	60.935	66.667	27.56	0.00	44.55	5.36
667	670	2.936032	AGGGACAGAAGGGCCCAC	60.936	66.667	27.56	17.97	44.55	4.61
668	671	4.048470	GGGACAGAAGGGCCCACC	62.048	72.222	27.56	15.45	41.64	4.61
680	683	4.974721	CCCACCCAAGGCTGCGTT	62.975	66.667	1.08	1.08	0.00	4.84
681	684	2.912025	CCACCCAAGGCTGCGTTT	60.912	61.111	4.63	0.00	0.00	3.60
682	685	2.644992	CACCCAAGGCTGCGTTTC	59.355	61.111	4.63	0.00	0.00	2.78
683	686	2.192861	CACCCAAGGCTGCGTTTCA	61.193	57.895	4.63	0.00	0.00	2.69
684	687	1.898574	ACCCAAGGCTGCGTTTCAG	60.899	57.895	4.63	0.03	45.62	3.02
685	688	1.600636	CCCAAGGCTGCGTTTCAGA	60.601	57.895	4.63	0.00	45.72	3.27
686	689	0.962356	CCCAAGGCTGCGTTTCAGAT	60.962	55.000	4.63	0.00	45.72	2.90
687	690	0.449388	CCAAGGCTGCGTTTCAGATC	59.551	55.000	4.63	0.00	45.72	2.75
688	691	1.446907	CAAGGCTGCGTTTCAGATCT	58.553	50.000	4.63	0.00	45.72	2.75
689	692	1.129998	CAAGGCTGCGTTTCAGATCTG	59.870	52.381	17.07	17.07	45.72	2.90
690	693	0.610174	AGGCTGCGTTTCAGATCTGA	59.390	50.000	21.67	21.67	45.72	3.27
691	694	1.005340	GGCTGCGTTTCAGATCTGAG	58.995	55.000	23.92	14.68	45.72	3.35
692	695	1.005340	GCTGCGTTTCAGATCTGAGG	58.995	55.000	23.92	17.89	45.72	3.86
693	696	1.404717	GCTGCGTTTCAGATCTGAGGA	60.405	52.381	23.92	14.80	45.72	3.71
694	697	2.932622	GCTGCGTTTCAGATCTGAGGAA	60.933	50.000	23.92	14.70	45.72	3.36
695	698	3.329386	CTGCGTTTCAGATCTGAGGAAA	58.671	45.455	23.92	14.00	45.72	3.13
696	699	3.738982	TGCGTTTCAGATCTGAGGAAAA	58.261	40.909	23.92	13.65	41.13	2.29
697	700	3.748048	TGCGTTTCAGATCTGAGGAAAAG	59.252	43.478	23.92	18.17	41.13	2.27
698	701	3.425492	GCGTTTCAGATCTGAGGAAAAGC	60.425	47.826	23.92	22.90	44.27	3.51
699	702	3.126000	CGTTTCAGATCTGAGGAAAAGCC	59.874	47.826	23.92	5.67	41.13	4.35
710	713	1.379527	GGAAAAGCCTACATCACGGG	58.620	55.000	0.00	0.00	0.00	5.28
711	714	1.065709	GGAAAAGCCTACATCACGGGA	60.066	52.381	0.00	0.00	0.00	5.14
712	715	2.421529	GGAAAAGCCTACATCACGGGAT	60.422	50.000	0.00	0.00	0.00	3.85
713	716	2.622064	AAAGCCTACATCACGGGATC	57.378	50.000	0.00	0.00	0.00	3.36
714	717	0.759346	AAGCCTACATCACGGGATCC	59.241	55.000	1.92	1.92	0.00	3.36
715	718	0.105453	AGCCTACATCACGGGATCCT	60.105	55.000	12.58	0.00	0.00	3.24
716	719	0.759346	GCCTACATCACGGGATCCTT	59.241	55.000	12.58	0.00	0.00	3.36
717	720	1.270358	GCCTACATCACGGGATCCTTC	60.270	57.143	12.58	0.00	0.00	3.46
718	721	1.344763	CCTACATCACGGGATCCTTCC	59.655	57.143	12.58	0.00	41.77	3.46
731	734	4.093743	GGATCCTTCCCTAATCTCTCTCC	58.906	52.174	3.84	0.00	35.84	3.71
732	735	3.621682	TCCTTCCCTAATCTCTCTCCC	57.378	52.381	0.00	0.00	0.00	4.30
733	736	3.143406	TCCTTCCCTAATCTCTCTCCCT	58.857	50.000	0.00	0.00	0.00	4.20
734	737	3.141272	TCCTTCCCTAATCTCTCTCCCTC	59.859	52.174	0.00	0.00	0.00	4.30
735	738	3.506398	CTTCCCTAATCTCTCTCCCTCC	58.494	54.545	0.00	0.00	0.00	4.30
736	739	2.808355	TCCCTAATCTCTCTCCCTCCT	58.192	52.381	0.00	0.00	0.00	3.69
737	740	2.448961	TCCCTAATCTCTCTCCCTCCTG	59.551	54.545	0.00	0.00	0.00	3.86
738	741	2.448961	CCCTAATCTCTCTCCCTCCTGA	59.551	54.545	0.00	0.00	0.00	3.86
739	742	3.116939	CCCTAATCTCTCTCCCTCCTGAA	60.117	52.174	0.00	0.00	0.00	3.02
740	743	3.895041	CCTAATCTCTCTCCCTCCTGAAC	59.105	52.174	0.00	0.00	0.00	3.18
741	744	3.774842	AATCTCTCTCCCTCCTGAACT	57.225	47.619	0.00	0.00	0.00	3.01
742	745	3.774842	ATCTCTCTCCCTCCTGAACTT	57.225	47.619	0.00	0.00	0.00	2.66
743	746	4.890499	ATCTCTCTCCCTCCTGAACTTA	57.110	45.455	0.00	0.00	0.00	2.24
744	747	4.676799	TCTCTCTCCCTCCTGAACTTAA	57.323	45.455	0.00	0.00	0.00	1.85
745	748	5.213868	TCTCTCTCCCTCCTGAACTTAAT	57.786	43.478	0.00	0.00	0.00	1.40
746	749	6.342819	TCTCTCTCCCTCCTGAACTTAATA	57.657	41.667	0.00	0.00	0.00	0.98
747	750	6.928202	TCTCTCTCCCTCCTGAACTTAATAT	58.072	40.000	0.00	0.00	0.00	1.28
748	751	7.007723	TCTCTCTCCCTCCTGAACTTAATATC	58.992	42.308	0.00	0.00	0.00	1.63
749	752	6.683537	TCTCTCCCTCCTGAACTTAATATCA	58.316	40.000	0.00	0.00	0.00	2.15
750	753	6.551601	TCTCTCCCTCCTGAACTTAATATCAC	59.448	42.308	0.00	0.00	0.00	3.06
751	754	5.602978	TCTCCCTCCTGAACTTAATATCACC	59.397	44.000	0.00	0.00	0.00	4.02
752	755	5.285401	TCCCTCCTGAACTTAATATCACCA	58.715	41.667	0.00	0.00	0.00	4.17
753	756	5.911178	TCCCTCCTGAACTTAATATCACCAT	59.089	40.000	0.00	0.00	0.00	3.55
754	757	6.043243	TCCCTCCTGAACTTAATATCACCATC	59.957	42.308	0.00	0.00	0.00	3.51
755	758	5.928839	CCTCCTGAACTTAATATCACCATCG	59.071	44.000	0.00	0.00	0.00	3.84
756	759	5.297547	TCCTGAACTTAATATCACCATCGC	58.702	41.667	0.00	0.00	0.00	4.58
757	760	4.452455	CCTGAACTTAATATCACCATCGCC	59.548	45.833	0.00	0.00	0.00	5.54
758	761	4.385825	TGAACTTAATATCACCATCGCCC	58.614	43.478	0.00	0.00	0.00	6.13
759	762	3.418684	ACTTAATATCACCATCGCCCC	57.581	47.619	0.00	0.00	0.00	5.80
760	763	2.039879	ACTTAATATCACCATCGCCCCC	59.960	50.000	0.00	0.00	0.00	5.40
761	764	2.038863	TAATATCACCATCGCCCCCT	57.961	50.000	0.00	0.00	0.00	4.79
762	765	0.401738	AATATCACCATCGCCCCCTG	59.598	55.000	0.00	0.00	0.00	4.45
763	766	0.473694	ATATCACCATCGCCCCCTGA	60.474	55.000	0.00	0.00	0.00	3.86
764	767	0.473694	TATCACCATCGCCCCCTGAT	60.474	55.000	0.00	0.00	0.00	2.90
765	768	1.355718	ATCACCATCGCCCCCTGATT	61.356	55.000	0.00	0.00	0.00	2.57
766	769	1.526917	CACCATCGCCCCCTGATTC	60.527	63.158	0.00	0.00	0.00	2.52
767	770	2.000701	ACCATCGCCCCCTGATTCA	61.001	57.895	0.00	0.00	0.00	2.57
768	771	1.227102	CCATCGCCCCCTGATTCAA	59.773	57.895	0.00	0.00	0.00	2.69
769	772	1.103398	CCATCGCCCCCTGATTCAAC	61.103	60.000	0.00	0.00	0.00	3.18
770	773	1.153168	ATCGCCCCCTGATTCAACG	60.153	57.895	0.00	0.00	0.00	4.10
771	774	2.608970	ATCGCCCCCTGATTCAACGG	62.609	60.000	0.00	0.00	0.00	4.44
772	775	2.440247	GCCCCCTGATTCAACGGG	60.440	66.667	11.75	11.75	37.73	5.28
773	776	3.087065	CCCCCTGATTCAACGGGT	58.913	61.111	14.51	0.00	36.18	5.28
774	777	1.378514	CCCCCTGATTCAACGGGTG	60.379	63.158	14.51	0.00	36.18	4.61
775	778	1.378514	CCCCTGATTCAACGGGTGG	60.379	63.158	9.50	0.00	36.18	4.61
776	779	1.378514	CCCTGATTCAACGGGTGGG	60.379	63.158	3.31	0.00	34.74	4.61
777	780	1.378514	CCTGATTCAACGGGTGGGG	60.379	63.158	0.00	0.00	0.00	4.96
778	781	2.034999	TGATTCAACGGGTGGGGC	59.965	61.111	0.00	0.00	0.00	5.80
779	782	2.754254	GATTCAACGGGTGGGGCC	60.754	66.667	0.00	0.00	0.00	5.80
780	783	3.264845	ATTCAACGGGTGGGGCCT	61.265	61.111	0.84	0.00	37.43	5.19
795	798	3.260100	CCTGGGTGGGGCTCAGTT	61.260	66.667	0.00	0.00	44.18	3.16
796	799	2.845345	CCTGGGTGGGGCTCAGTTT	61.845	63.158	0.00	0.00	44.18	2.66
797	800	1.497309	CCTGGGTGGGGCTCAGTTTA	61.497	60.000	0.00	0.00	44.18	2.01
798	801	0.322546	CTGGGTGGGGCTCAGTTTAC	60.323	60.000	0.00	0.00	40.79	2.01
799	802	1.001269	GGGTGGGGCTCAGTTTACC	60.001	63.158	0.00	0.00	0.00	2.85
800	803	1.498176	GGGTGGGGCTCAGTTTACCT	61.498	60.000	0.00	0.00	0.00	3.08
801	804	0.035343	GGTGGGGCTCAGTTTACCTC	60.035	60.000	0.00	0.00	0.00	3.85
802	805	0.690762	GTGGGGCTCAGTTTACCTCA	59.309	55.000	0.00	0.00	0.00	3.86
803	806	1.073284	GTGGGGCTCAGTTTACCTCAA	59.927	52.381	0.00	0.00	35.18	3.02
804	807	1.777878	TGGGGCTCAGTTTACCTCAAA	59.222	47.619	0.00	0.00	28.59	2.69
805	808	2.160205	GGGGCTCAGTTTACCTCAAAC	58.840	52.381	0.00	0.00	45.85	2.93
815	818	4.262617	GTTTACCTCAAACATCTCTCCCC	58.737	47.826	0.00	0.00	45.01	4.81
816	819	2.350863	ACCTCAAACATCTCTCCCCT	57.649	50.000	0.00	0.00	0.00	4.79
817	820	1.912043	ACCTCAAACATCTCTCCCCTG	59.088	52.381	0.00	0.00	0.00	4.45
818	821	2.191400	CCTCAAACATCTCTCCCCTGA	58.809	52.381	0.00	0.00	0.00	3.86
819	822	2.776536	CCTCAAACATCTCTCCCCTGAT	59.223	50.000	0.00	0.00	0.00	2.90
820	823	3.201708	CCTCAAACATCTCTCCCCTGATT	59.798	47.826	0.00	0.00	0.00	2.57
821	824	4.324874	CCTCAAACATCTCTCCCCTGATTT	60.325	45.833	0.00	0.00	0.00	2.17
822	825	4.592942	TCAAACATCTCTCCCCTGATTTG	58.407	43.478	0.00	0.00	0.00	2.32
823	826	2.725221	ACATCTCTCCCCTGATTTGC	57.275	50.000	0.00	0.00	0.00	3.68
824	827	2.203584	ACATCTCTCCCCTGATTTGCT	58.796	47.619	0.00	0.00	0.00	3.91
825	828	3.387962	ACATCTCTCCCCTGATTTGCTA	58.612	45.455	0.00	0.00	0.00	3.49
826	829	3.782523	ACATCTCTCCCCTGATTTGCTAA	59.217	43.478	0.00	0.00	0.00	3.09
827	830	4.228210	ACATCTCTCCCCTGATTTGCTAAA	59.772	41.667	0.00	0.00	0.00	1.85
828	831	4.927267	TCTCTCCCCTGATTTGCTAAAA	57.073	40.909	0.00	0.00	0.00	1.52
829	832	5.255397	TCTCTCCCCTGATTTGCTAAAAA	57.745	39.130	0.00	0.00	0.00	1.94
830	833	5.256474	TCTCTCCCCTGATTTGCTAAAAAG	58.744	41.667	0.00	0.00	0.00	2.27
831	834	4.344104	TCTCCCCTGATTTGCTAAAAAGG	58.656	43.478	5.57	5.57	0.00	3.11
832	835	3.440127	TCCCCTGATTTGCTAAAAAGGG	58.560	45.455	18.49	18.49	43.25	3.95
833	836	3.076785	TCCCCTGATTTGCTAAAAAGGGA	59.923	43.478	23.86	15.90	44.99	4.20
834	837	3.837731	CCCCTGATTTGCTAAAAAGGGAA	59.162	43.478	23.86	0.00	44.99	3.97
835	838	4.285775	CCCCTGATTTGCTAAAAAGGGAAA	59.714	41.667	23.86	0.00	44.99	3.13
836	839	5.482006	CCCTGATTTGCTAAAAAGGGAAAG	58.518	41.667	19.91	0.72	44.99	2.62
837	840	5.012046	CCCTGATTTGCTAAAAAGGGAAAGT	59.988	40.000	19.91	0.00	44.99	2.66
838	841	6.464322	CCCTGATTTGCTAAAAAGGGAAAGTT	60.464	38.462	19.91	0.00	44.99	2.66
839	842	6.646653	CCTGATTTGCTAAAAAGGGAAAGTTC	59.353	38.462	4.86	0.00	0.00	3.01
840	843	7.360113	TGATTTGCTAAAAAGGGAAAGTTCT	57.640	32.000	0.00	0.00	0.00	3.01
841	844	8.472007	TGATTTGCTAAAAAGGGAAAGTTCTA	57.528	30.769	0.00	0.00	0.00	2.10
842	845	8.357402	TGATTTGCTAAAAAGGGAAAGTTCTAC	58.643	33.333	0.00	0.00	0.00	2.59
843	846	6.644248	TTGCTAAAAAGGGAAAGTTCTACC	57.356	37.500	0.00	0.00	0.00	3.18
844	847	5.948842	TGCTAAAAAGGGAAAGTTCTACCT	58.051	37.500	0.00	0.00	34.04	3.08
845	848	5.768164	TGCTAAAAAGGGAAAGTTCTACCTG	59.232	40.000	0.00	0.00	32.66	4.00
846	849	5.768662	GCTAAAAAGGGAAAGTTCTACCTGT	59.231	40.000	0.00	0.00	32.66	4.00
847	850	6.072618	GCTAAAAAGGGAAAGTTCTACCTGTC	60.073	42.308	0.00	0.00	32.66	3.51
848	851	4.368565	AAAGGGAAAGTTCTACCTGTCC	57.631	45.455	0.00	0.00	38.03	4.02
849	852	1.900486	AGGGAAAGTTCTACCTGTCCG	59.100	52.381	0.00	0.00	39.44	4.79
850	853	1.897802	GGGAAAGTTCTACCTGTCCGA	59.102	52.381	0.00	0.00	39.44	4.55
851	854	2.301009	GGGAAAGTTCTACCTGTCCGAA	59.699	50.000	0.00	0.00	39.44	4.30
852	855	3.244318	GGGAAAGTTCTACCTGTCCGAAA	60.244	47.826	0.00	0.00	39.44	3.46
853	856	4.565028	GGGAAAGTTCTACCTGTCCGAAAT	60.565	45.833	0.00	0.00	39.44	2.17
854	857	5.001874	GGAAAGTTCTACCTGTCCGAAATT	58.998	41.667	0.00	0.00	29.24	1.82
855	858	5.106673	GGAAAGTTCTACCTGTCCGAAATTG	60.107	44.000	0.00	0.00	29.24	2.32
856	859	4.884668	AGTTCTACCTGTCCGAAATTGA	57.115	40.909	0.00	0.00	0.00	2.57
857	860	5.422214	AGTTCTACCTGTCCGAAATTGAT	57.578	39.130	0.00	0.00	0.00	2.57
858	861	5.420409	AGTTCTACCTGTCCGAAATTGATC	58.580	41.667	0.00	0.00	0.00	2.92
859	862	4.041740	TCTACCTGTCCGAAATTGATCG	57.958	45.455	0.00	0.00	42.37	3.69
860	863	2.762535	ACCTGTCCGAAATTGATCGT	57.237	45.000	0.00	0.00	41.16	3.73
861	864	3.053831	ACCTGTCCGAAATTGATCGTT	57.946	42.857	0.00	0.00	41.16	3.85
862	865	2.742053	ACCTGTCCGAAATTGATCGTTG	59.258	45.455	0.00	0.00	41.16	4.10
863	866	2.476185	CCTGTCCGAAATTGATCGTTGC	60.476	50.000	0.00	0.00	41.16	4.17
864	867	2.147150	TGTCCGAAATTGATCGTTGCA	58.853	42.857	0.00	0.00	41.16	4.08
865	868	2.550180	TGTCCGAAATTGATCGTTGCAA	59.450	40.909	0.00	0.00	41.16	4.08
866	869	2.908626	GTCCGAAATTGATCGTTGCAAC	59.091	45.455	19.89	19.89	41.16	4.17
888	891	3.368040	GCGCGCGAGATAGCTATG	58.632	61.111	37.18	0.00	34.40	2.23
889	892	2.783064	GCGCGCGAGATAGCTATGC	61.783	63.158	37.18	6.90	34.40	3.14
890	893	2.155194	CGCGCGAGATAGCTATGCC	61.155	63.158	28.94	1.41	34.40	4.40
891	894	1.214062	GCGCGAGATAGCTATGCCT	59.786	57.895	12.10	2.42	34.40	4.75
892	895	0.452184	GCGCGAGATAGCTATGCCTA	59.548	55.000	12.10	0.00	34.40	3.93
893	896	1.066303	GCGCGAGATAGCTATGCCTAT	59.934	52.381	12.10	0.00	34.40	2.57
894	897	2.480416	GCGCGAGATAGCTATGCCTATT	60.480	50.000	12.10	0.00	34.40	1.73
895	898	3.367607	CGCGAGATAGCTATGCCTATTC	58.632	50.000	11.94	0.00	34.40	1.75
896	899	3.367607	GCGAGATAGCTATGCCTATTCG	58.632	50.000	11.94	10.96	34.82	3.34
897	900	3.367607	CGAGATAGCTATGCCTATTCGC	58.632	50.000	11.94	0.00	30.10	4.70
898	901	3.181496	CGAGATAGCTATGCCTATTCGCA	60.181	47.826	11.94	0.00	44.35	5.10
899	902	4.675408	CGAGATAGCTATGCCTATTCGCAA	60.675	45.833	11.94	0.00	43.24	4.85
900	903	5.152623	AGATAGCTATGCCTATTCGCAAA	57.847	39.130	11.94	0.00	43.24	3.68
901	904	5.551233	AGATAGCTATGCCTATTCGCAAAA	58.449	37.500	11.94	0.00	43.24	2.44
902	905	5.997746	AGATAGCTATGCCTATTCGCAAAAA	59.002	36.000	11.94	0.00	43.24	1.94
960	963	1.338200	GCCTTGTGGACTCGTTCAGAT	60.338	52.381	0.00	0.00	34.57	2.90
965	968	5.400066	TTGTGGACTCGTTCAGATAATGA	57.600	39.130	0.00	0.00	35.62	2.57
992	995	1.272425	TGGTCTGGCCCAAAATACTGG	60.272	52.381	0.00	0.00	36.04	4.00
1022	1025	1.298713	CGGAAGATCTCACGGAGCG	60.299	63.158	10.26	0.00	35.20	5.03
1413	1425	3.182572	GCGCAGATATTCCGAACTGTAAG	59.817	47.826	0.30	0.00	42.29	2.34
1437	1449	4.332543	GCATATGTTCAGTCGTTGGAATGA	59.667	41.667	4.29	0.00	44.75	2.57
1439	1451	3.744238	TGTTCAGTCGTTGGAATGAGA	57.256	42.857	0.00	0.00	46.63	3.27
1474	1486	6.085458	CGTTTGACGTTTCTTGAGATCATTTG	59.915	38.462	0.00	0.00	36.74	2.32
1475	1487	6.859420	TTGACGTTTCTTGAGATCATTTGA	57.141	33.333	0.00	0.00	0.00	2.69
1496	1522	2.567049	GAGGGGACGTGACGAGTG	59.433	66.667	13.70	0.00	0.00	3.51
1501	1527	2.308039	GGACGTGACGAGTGTTGCC	61.308	63.158	13.70	0.00	0.00	4.52
1528	1801	2.223923	TGTTTGGGAATTTGAGTTGCGG	60.224	45.455	0.00	0.00	0.00	5.69
1571	1883	5.124297	TCATGTTGCCACAAATCACTATGAG	59.876	40.000	0.00	0.00	36.16	2.90
1648	1960	2.893637	GCCACCGCCTGTATATATCTG	58.106	52.381	0.00	0.00	0.00	2.90
1649	1961	2.893637	CCACCGCCTGTATATATCTGC	58.106	52.381	0.00	0.00	0.00	4.26
1650	1962	2.418746	CCACCGCCTGTATATATCTGCC	60.419	54.545	0.00	0.00	0.00	4.85
1651	1963	1.831736	ACCGCCTGTATATATCTGCCC	59.168	52.381	0.00	0.00	0.00	5.36
1652	1964	2.111384	CCGCCTGTATATATCTGCCCT	58.889	52.381	0.00	0.00	0.00	5.19
1653	1965	3.296854	CCGCCTGTATATATCTGCCCTA	58.703	50.000	0.00	0.00	0.00	3.53
1654	1966	3.704566	CCGCCTGTATATATCTGCCCTAA	59.295	47.826	0.00	0.00	0.00	2.69
1655	1967	4.345257	CCGCCTGTATATATCTGCCCTAAT	59.655	45.833	0.00	0.00	0.00	1.73
1656	1968	5.163301	CCGCCTGTATATATCTGCCCTAATT	60.163	44.000	0.00	0.00	0.00	1.40
1657	1969	6.041637	CCGCCTGTATATATCTGCCCTAATTA	59.958	42.308	0.00	0.00	0.00	1.40
1658	1970	7.256332	CCGCCTGTATATATCTGCCCTAATTAT	60.256	40.741	0.00	0.00	0.00	1.28
1659	1971	7.600375	CGCCTGTATATATCTGCCCTAATTATG	59.400	40.741	0.00	0.00	0.00	1.90
1660	1972	7.389053	GCCTGTATATATCTGCCCTAATTATGC	59.611	40.741	0.00	1.24	0.00	3.14
1661	1973	7.880195	CCTGTATATATCTGCCCTAATTATGCC	59.120	40.741	5.07	0.00	0.00	4.40
1662	1974	8.330638	TGTATATATCTGCCCTAATTATGCCA	57.669	34.615	5.07	0.00	0.00	4.92
1854	2356	4.621034	GCACACTGGTTACATTTGCATTAC	59.379	41.667	0.00	0.00	0.00	1.89
1888	2390	0.034670	GGCTGAGAGCTTTGGACCAT	60.035	55.000	0.00	0.00	41.99	3.55
1958	2460	2.544277	CCACACAAGCACAAATGGACAG	60.544	50.000	0.00	0.00	0.00	3.51
2045	2547	8.677300	TCTCAAGGCACAAATTAATCTAATGTC	58.323	33.333	0.00	0.00	0.00	3.06
2146	2651	0.537188	TTTCTCCTGGTCTGCGATCC	59.463	55.000	0.00	0.00	0.00	3.36
2147	2652	1.330655	TTCTCCTGGTCTGCGATCCC	61.331	60.000	0.00	0.00	0.00	3.85
2163	2668	0.982852	TCCCATCAGAATCGGCCTGT	60.983	55.000	0.00	0.00	33.57	4.00
2237	2743	3.782250	GCAGCACATAAACGAACGATCTG	60.782	47.826	0.14	0.00	0.00	2.90
2260	2766	2.674852	CTGTGATGCTAATTGCGTGACT	59.325	45.455	10.92	0.00	43.62	3.41
2261	2767	3.073678	TGTGATGCTAATTGCGTGACTT	58.926	40.909	10.92	0.00	43.62	3.01
2262	2768	3.125146	TGTGATGCTAATTGCGTGACTTC	59.875	43.478	10.92	0.00	43.62	3.01
2263	2769	3.372206	GTGATGCTAATTGCGTGACTTCT	59.628	43.478	5.08	0.00	46.63	2.85
2264	2770	3.371898	TGATGCTAATTGCGTGACTTCTG	59.628	43.478	0.00	0.00	46.63	3.02
2265	2771	2.766313	TGCTAATTGCGTGACTTCTGT	58.234	42.857	0.00	0.00	46.63	3.41
2266	2772	2.736721	TGCTAATTGCGTGACTTCTGTC	59.263	45.455	0.00	0.00	46.63	3.51
2267	2773	2.222596	GCTAATTGCGTGACTTCTGTCG	60.223	50.000	0.00	0.00	45.70	4.35
2268	2774	1.865865	AATTGCGTGACTTCTGTCGT	58.134	45.000	0.00	0.00	45.70	4.34
2269	2775	1.865865	ATTGCGTGACTTCTGTCGTT	58.134	45.000	0.00	0.00	45.70	3.85
2270	2776	1.647346	TTGCGTGACTTCTGTCGTTT	58.353	45.000	0.00	0.00	45.70	3.60
2292	2809	1.259609	TAGGGGTACGTGACTTGTGG	58.740	55.000	0.00	0.00	0.00	4.17
2385	2902	3.505293	GCCTGCTATCTGATTTGGAATCC	59.495	47.826	0.00	0.00	0.00	3.01
2387	2904	3.141398	TGCTATCTGATTTGGAATCCGC	58.859	45.455	0.00	0.00	0.00	5.54
2401	2918	7.584122	TTGGAATCCGCTATAGATAGGATAC	57.416	40.000	18.85	15.98	42.17	2.24
2402	2919	6.069331	TGGAATCCGCTATAGATAGGATACC	58.931	44.000	18.85	14.85	42.17	2.73
2403	2920	5.181622	GGAATCCGCTATAGATAGGATACCG	59.818	48.000	18.85	4.96	42.17	4.02
2404	2921	4.082665	TCCGCTATAGATAGGATACCGG	57.917	50.000	3.21	0.00	34.47	5.28
2405	2922	3.147629	CCGCTATAGATAGGATACCGGG	58.852	54.545	6.32	0.00	31.62	5.73
2406	2923	3.147629	CGCTATAGATAGGATACCGGGG	58.852	54.545	6.32	0.00	37.17	5.73
2407	2924	3.498334	GCTATAGATAGGATACCGGGGG	58.502	54.545	6.32	0.00	37.17	5.40
2408	2925	2.473576	ATAGATAGGATACCGGGGGC	57.526	55.000	6.32	0.00	37.17	5.80
2409	2926	0.337428	TAGATAGGATACCGGGGGCC	59.663	60.000	6.32	3.08	37.17	5.80
2410	2927	1.080538	GATAGGATACCGGGGGCCT	59.919	63.158	6.32	11.53	37.17	5.19
2411	2928	1.229529	ATAGGATACCGGGGGCCTG	60.230	63.158	18.20	0.00	37.17	4.85
2432	2949	3.351020	GCAAGCCTGCTATCTGATTTG	57.649	47.619	0.00	0.00	45.74	2.32
2433	2950	2.034305	GCAAGCCTGCTATCTGATTTGG	59.966	50.000	0.00	0.00	45.74	3.28
2434	2951	3.548770	CAAGCCTGCTATCTGATTTGGA	58.451	45.455	0.00	0.00	0.00	3.53
2435	2952	3.939740	AGCCTGCTATCTGATTTGGAA	57.060	42.857	0.00	0.00	0.00	3.53
2436	2953	4.450305	AGCCTGCTATCTGATTTGGAAT	57.550	40.909	0.00	0.00	0.00	3.01
2437	2954	4.396522	AGCCTGCTATCTGATTTGGAATC	58.603	43.478	0.00	0.00	0.00	2.52
2438	2955	3.505293	GCCTGCTATCTGATTTGGAATCC	59.495	47.826	0.00	0.00	0.00	3.01
2439	2956	3.750130	CCTGCTATCTGATTTGGAATCCG	59.250	47.826	0.00	0.00	0.00	4.18
2440	2957	3.141398	TGCTATCTGATTTGGAATCCGC	58.859	45.455	0.00	0.00	0.00	5.54
2441	2958	3.181451	TGCTATCTGATTTGGAATCCGCT	60.181	43.478	0.00	0.00	0.00	5.52
2442	2959	4.040339	TGCTATCTGATTTGGAATCCGCTA	59.960	41.667	0.00	0.00	0.00	4.26
2443	2960	5.181748	GCTATCTGATTTGGAATCCGCTAT	58.818	41.667	0.00	0.00	0.00	2.97
2444	2961	6.070824	TGCTATCTGATTTGGAATCCGCTATA	60.071	38.462	0.00	0.00	0.00	1.31
2445	2962	6.478344	GCTATCTGATTTGGAATCCGCTATAG	59.522	42.308	0.00	0.00	0.00	1.31
2446	2963	6.611613	ATCTGATTTGGAATCCGCTATAGA	57.388	37.500	3.21	0.00	0.00	1.98
2447	2964	6.611613	TCTGATTTGGAATCCGCTATAGAT	57.388	37.500	3.21	0.00	0.00	1.98
2448	2965	7.718334	TCTGATTTGGAATCCGCTATAGATA	57.282	36.000	3.21	0.00	0.00	1.98
2449	2966	7.776107	TCTGATTTGGAATCCGCTATAGATAG	58.224	38.462	3.21	0.00	0.00	2.08
2450	2967	6.878317	TGATTTGGAATCCGCTATAGATAGG	58.122	40.000	3.21	3.52	0.00	2.57
2451	2968	6.667848	TGATTTGGAATCCGCTATAGATAGGA	59.332	38.462	3.21	9.04	37.17	2.94
2452	2969	7.345653	TGATTTGGAATCCGCTATAGATAGGAT	59.654	37.037	15.05	15.05	44.64	3.24
2453	2970	8.783660	ATTTGGAATCCGCTATAGATAGGATA	57.216	34.615	18.85	8.67	42.17	2.59
2458	2975	3.147629	CCGCTATAGATAGGATACCGGG	58.852	54.545	6.32	0.00	31.62	5.73
2845	3490	5.647658	TGTACTGGCTTTGATAGTTTGGATG	59.352	40.000	0.00	0.00	0.00	3.51
2911	3557	6.546034	AGAGTCTAGAAGATTAGGCAGACTTC	59.454	42.308	0.00	0.00	42.00	3.01
2912	3558	6.191315	AGTCTAGAAGATTAGGCAGACTTCA	58.809	40.000	0.00	0.00	39.67	3.02
2931	3577	5.239306	ACTTCAATGATGTAACACCACACAG	59.761	40.000	0.00	0.00	0.00	3.66
3029	3675	3.002102	GCCCCAAGCAACAAATATTGTG	58.998	45.455	0.00	0.00	44.59	3.33
3030	3676	3.598299	CCCCAAGCAACAAATATTGTGG	58.402	45.455	0.00	0.00	44.59	4.17
3031	3677	3.260380	CCCCAAGCAACAAATATTGTGGA	59.740	43.478	1.83	0.00	44.59	4.02
3049	3701	0.457035	GACGTACGGGTTGATAGCCA	59.543	55.000	21.06	0.00	42.23	4.75
3128	3780	2.038975	AAGAGTAGCGGAGGGGCA	59.961	61.111	0.00	0.00	34.64	5.36
3132	3784	3.142838	GTAGCGGAGGGGCACGTA	61.143	66.667	0.00	0.00	34.64	3.57
3145	3797	4.885325	AGGGGCACGTATTTTCGAAATTAT	59.115	37.500	12.12	5.87	34.70	1.28
3150	3802	6.423862	GCACGTATTTTCGAAATTATAGGCA	58.576	36.000	12.12	0.00	34.70	4.75
3245	3897	1.553690	GCAGCCTAGAGTCCCACCAA	61.554	60.000	0.00	0.00	0.00	3.67
3347	3999	6.129179	AGGTCATGAAAACAGAGAAAGGAAA	58.871	36.000	0.00	0.00	0.00	3.13
3461	4113	8.150945	ACTATTTGGTTCTGTAGCGATAATGAT	58.849	33.333	0.00	0.00	0.00	2.45
3466	4118	8.534333	TGGTTCTGTAGCGATAATGATAAATC	57.466	34.615	0.00	0.00	0.00	2.17
3545	4197	5.796502	AAACCTCATTTATCTCCTTCCCA	57.203	39.130	0.00	0.00	0.00	4.37
3594	4246	3.290948	AAACTGTTAGTGTGGCCTCAA	57.709	42.857	9.53	0.00	0.00	3.02
3738	4390	5.390387	TCCTGGCAGGTACTTATTTTGTTT	58.610	37.500	31.60	0.00	34.60	2.83
3739	4391	5.836358	TCCTGGCAGGTACTTATTTTGTTTT	59.164	36.000	31.60	0.00	34.60	2.43
3898	4550	2.433436	CAGCCGGTAGTTTAAAAGCCT	58.567	47.619	1.90	0.00	0.00	4.58
3904	4556	3.866910	CGGTAGTTTAAAAGCCTATCGCA	59.133	43.478	4.62	0.00	41.38	5.10
3906	4558	5.007332	CGGTAGTTTAAAAGCCTATCGCAAT	59.993	40.000	4.62	0.00	41.38	3.56
4064	4724	1.546773	GGGGTGCTTGTACATGGTCAA	60.547	52.381	10.47	1.14	0.00	3.18
4133	4794	2.574018	GGCCCCAAAGGTCTGTTGC	61.574	63.158	0.00	0.00	37.23	4.17
4149	4810	3.200593	GCCCACGAGCAGCTGATG	61.201	66.667	20.43	8.92	0.00	3.07
4203	4864	6.150140	GTGAGCAGATACTTTTCTTGATGGTT	59.850	38.462	0.00	0.00	0.00	3.67
4262	4923	5.133221	AGTTGGTTGATGAACTAAAGCACT	58.867	37.500	0.00	0.00	34.65	4.40
4289	4950	5.046159	ACCACATTAATTCAGGAACTCCGTA	60.046	40.000	4.95	0.00	42.08	4.02
4291	4952	6.373216	CCACATTAATTCAGGAACTCCGTAAA	59.627	38.462	0.00	0.00	42.08	2.01
4292	4953	7.094549	CCACATTAATTCAGGAACTCCGTAAAA	60.095	37.037	0.00	0.00	42.08	1.52
4294	4955	9.020731	ACATTAATTCAGGAACTCCGTAAAATT	57.979	29.630	0.00	0.00	42.08	1.82
4362	5023	3.815856	TTGGTTTGCAGCTTTTCATCA	57.184	38.095	0.00	0.00	0.00	3.07
4368	5029	5.335897	GGTTTGCAGCTTTTCATCATGTCTA	60.336	40.000	0.00	0.00	0.00	2.59
4382	5043	8.181904	TCATCATGTCTATAGCATCACAGTAA	57.818	34.615	6.67	0.00	0.00	2.24
4428	5730	8.811378	GCATTCTTGGATATCTTTAACAAAAGC	58.189	33.333	2.05	0.00	0.00	3.51
4447	5749	8.395633	ACAAAAGCGATAGTGTTACCATTTATC	58.604	33.333	0.00	0.00	39.35	1.75
4513	5815	6.523676	GCAGCTTGCAAATTTTAAACAGTA	57.476	33.333	0.00	0.00	44.26	2.74
4514	5816	6.942891	GCAGCTTGCAAATTTTAAACAGTAA	58.057	32.000	0.00	0.00	44.26	2.24
4518	5820	7.224557	AGCTTGCAAATTTTAAACAGTAACTGG	59.775	33.333	0.00	0.00	35.51	4.00
4570	5872	4.817286	TCTTAAGAATCTCCCTACCTCCC	58.183	47.826	1.68	0.00	0.00	4.30
4585	5887	3.385115	ACCTCCCTCCGATCTTTGTATT	58.615	45.455	0.00	0.00	0.00	1.89
4588	5890	5.193679	CCTCCCTCCGATCTTTGTATTTTT	58.806	41.667	0.00	0.00	0.00	1.94
4721	6023	4.065088	TCAAAGTAACCACTCATGCACTC	58.935	43.478	0.00	0.00	32.29	3.51
4890	6192	3.117246	TCCCGAGGAAGAGGCTAAGATAA	60.117	47.826	0.00	0.00	0.00	1.75
4967	6269	1.227527	GGCTTTGGGTGTGGCAAAC	60.228	57.895	0.00	0.00	0.00	2.93
5009	6311	3.729526	AAAGCTGATGATGACGAAACG	57.270	42.857	0.00	0.00	0.00	3.60
5083	6385	0.676466	CTTGGACCTGCGTGCCATTA	60.676	55.000	0.00	0.00	0.00	1.90
5239	6541	3.664107	TGCACAGTTCCACTCTGTTATC	58.336	45.455	0.00	0.00	43.14	1.75
5240	6542	3.324846	TGCACAGTTCCACTCTGTTATCT	59.675	43.478	0.00	0.00	43.14	1.98
5251	6553	7.155328	TCCACTCTGTTATCTCTGAAAGTTTC	58.845	38.462	8.75	8.75	33.76	2.78
5293	6595	6.941857	AGGGACACACAGTTGTTTTTATTTT	58.058	32.000	0.00	0.00	31.66	1.82
5339	6641	1.354368	GGTCCATTTGAACCCTCTCCA	59.646	52.381	0.00	0.00	0.00	3.86
5340	6642	2.437413	GTCCATTTGAACCCTCTCCAC	58.563	52.381	0.00	0.00	0.00	4.02
5342	6644	1.453155	CATTTGAACCCTCTCCACGG	58.547	55.000	0.00	0.00	0.00	4.94
5394	6740	7.634671	ATGCATTGTCTTGATGTCATCTTTA	57.365	32.000	13.90	0.00	0.00	1.85
5403	6750	9.371136	GTCTTGATGTCATCTTTACTTGTGATA	57.629	33.333	13.90	0.00	0.00	2.15
5450	6797	7.466746	AAATTGTCTGCATAGGTGTTACAAT	57.533	32.000	0.00	0.00	36.51	2.71
5457	6805	7.279981	GTCTGCATAGGTGTTACAATGAATGTA	59.720	37.037	0.25	0.00	43.63	2.29
5526	6874	9.883142	GGTCTAATTATCTGATTCTCCATAAGG	57.117	37.037	0.00	0.00	0.00	2.69
5551	7005	9.502091	GGCCATCATAAGAAATACTACATGTTA	57.498	33.333	2.30	0.00	0.00	2.41
5652	7107	7.124901	ACTGAGATACTCCTTTTCTTGCAGATA	59.875	37.037	0.00	0.00	0.00	1.98
5740	7195	4.133078	GGGGAGAATATCTTGCAAGTCAG	58.867	47.826	25.19	0.99	0.00	3.51
5816	7274	0.259065	TCTACCCGGAGCACATCTCT	59.741	55.000	0.73	0.00	41.60	3.10
5868	7326	6.756542	GGAAGTTTTGTACAAGCACTGAATTT	59.243	34.615	18.42	8.85	0.00	1.82
5869	7327	7.254084	GGAAGTTTTGTACAAGCACTGAATTTG	60.254	37.037	18.42	0.00	0.00	2.32
5898	7356	3.261897	TCAGGATTGAGGTGTTCTCTTCC	59.738	47.826	0.00	0.00	42.86	3.46
5904	7362	2.777692	TGAGGTGTTCTCTTCCCAAGTT	59.222	45.455	0.00	0.00	42.86	2.66
5905	7363	3.181454	TGAGGTGTTCTCTTCCCAAGTTC	60.181	47.826	0.00	0.00	42.86	3.01
5939	7397	9.013490	CCATTCAACTGAAATGTCGAAATAATC	57.987	33.333	0.00	0.00	37.61	1.75
5959	7417	4.322080	TCTATGCCTGACAGGATAAACG	57.678	45.455	26.25	7.54	37.67	3.60
5983	7441	2.680312	TCAGCTGGAGTTGTAGCATC	57.320	50.000	15.13	0.00	42.29	3.91
5986	7444	1.012841	GCTGGAGTTGTAGCATCTGC	58.987	55.000	0.00	0.00	39.67	4.26

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
27	28	2.236146	TCCTAGCAACATCCAACATCGT	59.764	45.455	0.00	0.00	0.00	3.73
85	86	1.597797	CTGCAACCATGGACGGCAAT	61.598	55.000	21.47	0.00	33.58	3.56
314	317	3.133464	CGTTGCCGCCATGGATGT	61.133	61.111	18.40	0.00	42.00	3.06
344	347	1.134280	CCATGGACGAGCATCTCCTTT	60.134	52.381	5.56	0.00	34.71	3.11
346	349	2.037620	GCCATGGACGAGCATCTCCT	62.038	60.000	18.40	0.00	34.71	3.69
347	350	1.596477	GCCATGGACGAGCATCTCC	60.596	63.158	18.40	0.00	34.37	3.71
349	352	1.145598	CTGCCATGGACGAGCATCT	59.854	57.895	18.40	0.00	35.64	2.90
350	353	2.541120	GCTGCCATGGACGAGCATC	61.541	63.158	18.40	0.00	35.64	3.91
351	354	2.515523	GCTGCCATGGACGAGCAT	60.516	61.111	18.40	0.00	35.64	3.79
352	355	4.783621	GGCTGCCATGGACGAGCA	62.784	66.667	24.27	11.90	32.83	4.26
353	356	4.479993	AGGCTGCCATGGACGAGC	62.480	66.667	22.65	18.21	0.00	5.03
354	357	2.202987	GAGGCTGCCATGGACGAG	60.203	66.667	22.65	8.74	0.00	4.18
355	358	4.147449	CGAGGCTGCCATGGACGA	62.147	66.667	22.65	0.00	0.00	4.20
356	359	4.147449	TCGAGGCTGCCATGGACG	62.147	66.667	22.65	16.69	0.00	4.79
357	360	2.202987	CTCGAGGCTGCCATGGAC	60.203	66.667	22.65	7.64	0.00	4.02
358	361	2.364186	TCTCGAGGCTGCCATGGA	60.364	61.111	22.65	13.26	0.00	3.41
359	362	1.964608	TTCTCTCGAGGCTGCCATGG	61.965	60.000	22.65	7.63	0.00	3.66
360	363	0.107993	TTTCTCTCGAGGCTGCCATG	60.108	55.000	22.65	12.68	0.00	3.66
361	364	0.615331	TTTTCTCTCGAGGCTGCCAT	59.385	50.000	22.65	5.85	0.00	4.40
362	365	0.396435	TTTTTCTCTCGAGGCTGCCA	59.604	50.000	22.65	0.00	0.00	4.92
363	366	1.082690	CTTTTTCTCTCGAGGCTGCC	58.917	55.000	11.65	11.65	0.00	4.85
364	367	0.445829	GCTTTTTCTCTCGAGGCTGC	59.554	55.000	13.56	4.37	0.00	5.25
365	368	1.800805	TGCTTTTTCTCTCGAGGCTG	58.199	50.000	13.56	3.66	0.00	4.85
366	369	2.550830	TTGCTTTTTCTCTCGAGGCT	57.449	45.000	13.56	0.00	0.00	4.58
367	370	2.095516	CCTTTGCTTTTTCTCTCGAGGC	60.096	50.000	13.56	6.61	0.00	4.70
368	371	3.403038	TCCTTTGCTTTTTCTCTCGAGG	58.597	45.455	13.56	3.44	0.00	4.63
369	372	4.310769	TCTCCTTTGCTTTTTCTCTCGAG	58.689	43.478	5.93	5.93	0.00	4.04
370	373	4.039245	TCTCTCCTTTGCTTTTTCTCTCGA	59.961	41.667	0.00	0.00	0.00	4.04
371	374	4.310769	TCTCTCCTTTGCTTTTTCTCTCG	58.689	43.478	0.00	0.00	0.00	4.04
372	375	5.181056	CCTTCTCTCCTTTGCTTTTTCTCTC	59.819	44.000	0.00	0.00	0.00	3.20
373	376	5.069318	CCTTCTCTCCTTTGCTTTTTCTCT	58.931	41.667	0.00	0.00	0.00	3.10
374	377	5.066593	TCCTTCTCTCCTTTGCTTTTTCTC	58.933	41.667	0.00	0.00	0.00	2.87
375	378	5.053978	TCCTTCTCTCCTTTGCTTTTTCT	57.946	39.130	0.00	0.00	0.00	2.52
376	379	5.532779	TCTTCCTTCTCTCCTTTGCTTTTTC	59.467	40.000	0.00	0.00	0.00	2.29
377	380	5.449553	TCTTCCTTCTCTCCTTTGCTTTTT	58.550	37.500	0.00	0.00	0.00	1.94
378	381	5.053978	TCTTCCTTCTCTCCTTTGCTTTT	57.946	39.130	0.00	0.00	0.00	2.27
379	382	4.349342	TCTCTTCCTTCTCTCCTTTGCTTT	59.651	41.667	0.00	0.00	0.00	3.51
380	383	3.906846	TCTCTTCCTTCTCTCCTTTGCTT	59.093	43.478	0.00	0.00	0.00	3.91
381	384	3.515104	CTCTCTTCCTTCTCTCCTTTGCT	59.485	47.826	0.00	0.00	0.00	3.91
382	385	3.369366	CCTCTCTTCCTTCTCTCCTTTGC	60.369	52.174	0.00	0.00	0.00	3.68
383	386	4.093011	TCCTCTCTTCCTTCTCTCCTTTG	58.907	47.826	0.00	0.00	0.00	2.77
384	387	4.412060	TCCTCTCTTCCTTCTCTCCTTT	57.588	45.455	0.00	0.00	0.00	3.11
385	388	4.045334	TCTTCCTCTCTTCCTTCTCTCCTT	59.955	45.833	0.00	0.00	0.00	3.36
386	389	3.596046	TCTTCCTCTCTTCCTTCTCTCCT	59.404	47.826	0.00	0.00	0.00	3.69
387	390	3.976015	TCTTCCTCTCTTCCTTCTCTCC	58.024	50.000	0.00	0.00	0.00	3.71
388	391	5.261216	TCTTCTTCCTCTCTTCCTTCTCTC	58.739	45.833	0.00	0.00	0.00	3.20
389	392	5.269554	TCTTCTTCCTCTCTTCCTTCTCT	57.730	43.478	0.00	0.00	0.00	3.10
390	393	5.245075	TGTTCTTCTTCCTCTCTTCCTTCTC	59.755	44.000	0.00	0.00	0.00	2.87
391	394	5.151454	TGTTCTTCTTCCTCTCTTCCTTCT	58.849	41.667	0.00	0.00	0.00	2.85
392	395	5.476091	TGTTCTTCTTCCTCTCTTCCTTC	57.524	43.478	0.00	0.00	0.00	3.46
393	396	5.221823	CCTTGTTCTTCTTCCTCTCTTCCTT	60.222	44.000	0.00	0.00	0.00	3.36
394	397	4.285775	CCTTGTTCTTCTTCCTCTCTTCCT	59.714	45.833	0.00	0.00	0.00	3.36
395	398	4.284746	TCCTTGTTCTTCTTCCTCTCTTCC	59.715	45.833	0.00	0.00	0.00	3.46
396	399	5.476091	TCCTTGTTCTTCTTCCTCTCTTC	57.524	43.478	0.00	0.00	0.00	2.87
397	400	5.896073	TTCCTTGTTCTTCTTCCTCTCTT	57.104	39.130	0.00	0.00	0.00	2.85
398	401	5.545723	TCATTCCTTGTTCTTCTTCCTCTCT	59.454	40.000	0.00	0.00	0.00	3.10
399	402	5.799213	TCATTCCTTGTTCTTCTTCCTCTC	58.201	41.667	0.00	0.00	0.00	3.20
400	403	5.309282	ACTCATTCCTTGTTCTTCTTCCTCT	59.691	40.000	0.00	0.00	0.00	3.69
401	404	5.411053	CACTCATTCCTTGTTCTTCTTCCTC	59.589	44.000	0.00	0.00	0.00	3.71
402	405	5.312079	CACTCATTCCTTGTTCTTCTTCCT	58.688	41.667	0.00	0.00	0.00	3.36
403	406	4.457257	CCACTCATTCCTTGTTCTTCTTCC	59.543	45.833	0.00	0.00	0.00	3.46
404	407	5.308825	TCCACTCATTCCTTGTTCTTCTTC	58.691	41.667	0.00	0.00	0.00	2.87
405	408	5.310409	TCCACTCATTCCTTGTTCTTCTT	57.690	39.130	0.00	0.00	0.00	2.52
406	409	4.982241	TCCACTCATTCCTTGTTCTTCT	57.018	40.909	0.00	0.00	0.00	2.85
407	410	4.397417	CCATCCACTCATTCCTTGTTCTTC	59.603	45.833	0.00	0.00	0.00	2.87
408	411	4.338879	CCATCCACTCATTCCTTGTTCTT	58.661	43.478	0.00	0.00	0.00	2.52
409	412	3.308688	CCCATCCACTCATTCCTTGTTCT	60.309	47.826	0.00	0.00	0.00	3.01
410	413	3.019564	CCCATCCACTCATTCCTTGTTC	58.980	50.000	0.00	0.00	0.00	3.18
411	414	2.649312	TCCCATCCACTCATTCCTTGTT	59.351	45.455	0.00	0.00	0.00	2.83
412	415	2.278245	TCCCATCCACTCATTCCTTGT	58.722	47.619	0.00	0.00	0.00	3.16
413	416	3.054139	TCTTCCCATCCACTCATTCCTTG	60.054	47.826	0.00	0.00	0.00	3.61
414	417	3.192944	TCTTCCCATCCACTCATTCCTT	58.807	45.455	0.00	0.00	0.00	3.36
415	418	2.850833	TCTTCCCATCCACTCATTCCT	58.149	47.619	0.00	0.00	0.00	3.36
416	419	3.054065	ACTTCTTCCCATCCACTCATTCC	60.054	47.826	0.00	0.00	0.00	3.01
417	420	4.080638	AGACTTCTTCCCATCCACTCATTC	60.081	45.833	0.00	0.00	0.00	2.67
418	421	3.848975	AGACTTCTTCCCATCCACTCATT	59.151	43.478	0.00	0.00	0.00	2.57
419	422	3.458831	AGACTTCTTCCCATCCACTCAT	58.541	45.455	0.00	0.00	0.00	2.90
420	423	2.907892	AGACTTCTTCCCATCCACTCA	58.092	47.619	0.00	0.00	0.00	3.41
421	424	5.187967	TCTTTAGACTTCTTCCCATCCACTC	59.812	44.000	0.00	0.00	0.00	3.51
422	425	5.094387	TCTTTAGACTTCTTCCCATCCACT	58.906	41.667	0.00	0.00	0.00	4.00
423	426	5.187967	TCTCTTTAGACTTCTTCCCATCCAC	59.812	44.000	0.00	0.00	0.00	4.02
424	427	5.342017	TCTCTTTAGACTTCTTCCCATCCA	58.658	41.667	0.00	0.00	0.00	3.41
425	428	5.941555	TCTCTTTAGACTTCTTCCCATCC	57.058	43.478	0.00	0.00	0.00	3.51
426	429	9.541143	CTTTATCTCTTTAGACTTCTTCCCATC	57.459	37.037	0.00	0.00	33.57	3.51
427	430	9.052365	ACTTTATCTCTTTAGACTTCTTCCCAT	57.948	33.333	0.00	0.00	33.57	4.00
428	431	8.437274	ACTTTATCTCTTTAGACTTCTTCCCA	57.563	34.615	0.00	0.00	33.57	4.37
444	447	9.047371	GCCATAGTTTCCTCTTAACTTTATCTC	57.953	37.037	0.00	0.00	37.12	2.75
445	448	7.993758	GGCCATAGTTTCCTCTTAACTTTATCT	59.006	37.037	0.00	0.00	37.12	1.98
446	449	7.228906	GGGCCATAGTTTCCTCTTAACTTTATC	59.771	40.741	4.39	0.00	37.12	1.75
447	450	7.061054	GGGCCATAGTTTCCTCTTAACTTTAT	58.939	38.462	4.39	0.00	37.12	1.40
448	451	6.012333	TGGGCCATAGTTTCCTCTTAACTTTA	60.012	38.462	0.00	0.00	37.12	1.85
449	452	5.222254	TGGGCCATAGTTTCCTCTTAACTTT	60.222	40.000	0.00	0.00	37.12	2.66
450	453	4.291249	TGGGCCATAGTTTCCTCTTAACTT	59.709	41.667	0.00	0.00	37.12	2.66
451	454	3.850173	TGGGCCATAGTTTCCTCTTAACT	59.150	43.478	0.00	0.00	39.13	2.24
452	455	3.945921	GTGGGCCATAGTTTCCTCTTAAC	59.054	47.826	10.70	0.00	0.00	2.01
453	456	3.589735	TGTGGGCCATAGTTTCCTCTTAA	59.410	43.478	10.70	0.00	0.00	1.85
454	457	3.054655	GTGTGGGCCATAGTTTCCTCTTA	60.055	47.826	10.70	0.00	0.00	2.10
455	458	1.992557	TGTGGGCCATAGTTTCCTCTT	59.007	47.619	10.70	0.00	0.00	2.85
456	459	1.282157	GTGTGGGCCATAGTTTCCTCT	59.718	52.381	10.70	0.00	0.00	3.69
457	460	1.004277	TGTGTGGGCCATAGTTTCCTC	59.996	52.381	10.70	0.00	0.00	3.71
458	461	1.072266	TGTGTGGGCCATAGTTTCCT	58.928	50.000	10.70	0.00	0.00	3.36
459	462	1.544246	GTTGTGTGGGCCATAGTTTCC	59.456	52.381	10.70	0.00	0.00	3.13
460	463	2.235016	TGTTGTGTGGGCCATAGTTTC	58.765	47.619	10.70	0.00	0.00	2.78
461	464	2.373335	TGTTGTGTGGGCCATAGTTT	57.627	45.000	10.70	0.00	0.00	2.66
462	465	2.364002	GTTTGTTGTGTGGGCCATAGTT	59.636	45.455	10.70	0.00	0.00	2.24
463	466	1.960689	GTTTGTTGTGTGGGCCATAGT	59.039	47.619	10.70	0.00	0.00	2.12
464	467	1.959985	TGTTTGTTGTGTGGGCCATAG	59.040	47.619	10.70	0.00	0.00	2.23
465	468	1.683917	GTGTTTGTTGTGTGGGCCATA	59.316	47.619	10.70	3.21	0.00	2.74
466	469	0.463620	GTGTTTGTTGTGTGGGCCAT	59.536	50.000	10.70	0.00	0.00	4.40
467	470	1.893786	GTGTTTGTTGTGTGGGCCA	59.106	52.632	0.00	0.00	0.00	5.36
468	471	1.226831	CGTGTTTGTTGTGTGGGCC	60.227	57.895	0.00	0.00	0.00	5.80
469	472	1.876263	GCGTGTTTGTTGTGTGGGC	60.876	57.895	0.00	0.00	0.00	5.36
470	473	0.525242	CAGCGTGTTTGTTGTGTGGG	60.525	55.000	0.00	0.00	0.00	4.61
471	474	1.139226	GCAGCGTGTTTGTTGTGTGG	61.139	55.000	0.00	0.00	0.00	4.17
472	475	1.462871	CGCAGCGTGTTTGTTGTGTG	61.463	55.000	6.65	0.00	0.00	3.82
473	476	1.226267	CGCAGCGTGTTTGTTGTGT	60.226	52.632	6.65	0.00	0.00	3.72
474	477	0.796491	AACGCAGCGTGTTTGTTGTG	60.796	50.000	23.78	0.00	39.99	3.33
475	478	0.796491	CAACGCAGCGTGTTTGTTGT	60.796	50.000	23.78	0.00	39.99	3.32
476	479	1.909483	CAACGCAGCGTGTTTGTTG	59.091	52.632	23.78	11.18	39.99	3.33
477	480	1.871789	GCAACGCAGCGTGTTTGTT	60.872	52.632	23.78	0.33	39.99	2.83
478	481	2.277884	GCAACGCAGCGTGTTTGT	60.278	55.556	23.78	1.24	39.99	2.83
479	482	1.658102	ATGCAACGCAGCGTGTTTG	60.658	52.632	23.78	17.47	43.65	2.93
480	483	1.658102	CATGCAACGCAGCGTGTTT	60.658	52.632	23.78	2.17	43.65	2.83
481	484	2.051076	CATGCAACGCAGCGTGTT	60.051	55.556	23.78	3.09	43.65	3.32
500	503	4.050934	CCAAGTTTTCGGCCGGCC	62.051	66.667	36.69	36.69	0.00	6.13
501	504	4.717629	GCCAAGTTTTCGGCCGGC	62.718	66.667	27.83	21.18	42.82	6.13
506	509	2.622962	GGACCGGCCAAGTTTTCGG	61.623	63.158	0.00	0.00	46.95	4.30
507	510	2.951458	GGACCGGCCAAGTTTTCG	59.049	61.111	0.00	0.00	36.34	3.46
508	511	2.951458	CGGACCGGCCAAGTTTTC	59.049	61.111	5.81	0.00	35.94	2.29
509	512	3.292159	GCGGACCGGCCAAGTTTT	61.292	61.111	17.22	0.00	35.94	2.43
524	527	3.588891	GAAACGTTTCTGGCCGGCG	62.589	63.158	29.27	7.85	34.41	6.46
525	528	2.254350	GAAACGTTTCTGGCCGGC	59.746	61.111	29.27	21.18	34.41	6.13
526	529	1.170290	AAGGAAACGTTTCTGGCCGG	61.170	55.000	33.23	4.71	37.35	6.13
527	530	1.515081	TAAGGAAACGTTTCTGGCCG	58.485	50.000	33.23	0.00	37.35	6.13
528	531	5.830000	AATATAAGGAAACGTTTCTGGCC	57.170	39.130	33.23	21.28	37.35	5.36
529	532	7.535997	AGAAAATATAAGGAAACGTTTCTGGC	58.464	34.615	33.23	20.57	37.35	4.85
530	533	8.182227	GGAGAAAATATAAGGAAACGTTTCTGG	58.818	37.037	33.23	0.00	34.80	3.86
531	534	8.947115	AGGAGAAAATATAAGGAAACGTTTCTG	58.053	33.333	33.23	0.00	34.80	3.02
532	535	9.516546	AAGGAGAAAATATAAGGAAACGTTTCT	57.483	29.630	33.23	20.92	36.74	2.52
533	536	9.770503	GAAGGAGAAAATATAAGGAAACGTTTC	57.229	33.333	28.83	28.83	36.46	2.78
534	537	8.737175	GGAAGGAGAAAATATAAGGAAACGTTT	58.263	33.333	14.57	14.57	0.00	3.60
535	538	8.107729	AGGAAGGAGAAAATATAAGGAAACGTT	58.892	33.333	0.00	0.00	0.00	3.99
536	539	7.631007	AGGAAGGAGAAAATATAAGGAAACGT	58.369	34.615	0.00	0.00	0.00	3.99
537	540	9.780186	ATAGGAAGGAGAAAATATAAGGAAACG	57.220	33.333	0.00	0.00	0.00	3.60
552	555	9.950496	GCATATCTTTTATTGATAGGAAGGAGA	57.050	33.333	0.00	0.00	32.06	3.71
553	556	8.877779	CGCATATCTTTTATTGATAGGAAGGAG	58.122	37.037	0.00	0.00	32.06	3.69
554	557	8.593679	TCGCATATCTTTTATTGATAGGAAGGA	58.406	33.333	0.00	0.00	32.06	3.36
555	558	8.777865	TCGCATATCTTTTATTGATAGGAAGG	57.222	34.615	0.00	0.00	32.06	3.46
556	559	8.386606	GCTCGCATATCTTTTATTGATAGGAAG	58.613	37.037	0.00	0.00	32.06	3.46
557	560	8.097038	AGCTCGCATATCTTTTATTGATAGGAA	58.903	33.333	0.00	0.00	32.06	3.36
558	561	7.615403	AGCTCGCATATCTTTTATTGATAGGA	58.385	34.615	0.00	0.00	32.06	2.94
559	562	7.840342	AGCTCGCATATCTTTTATTGATAGG	57.160	36.000	0.00	0.00	33.10	2.57
560	563	8.106956	CGAAGCTCGCATATCTTTTATTGATAG	58.893	37.037	0.00	0.00	31.14	2.08
561	564	7.063426	CCGAAGCTCGCATATCTTTTATTGATA	59.937	37.037	0.00	0.00	38.82	2.15
562	565	6.128445	CCGAAGCTCGCATATCTTTTATTGAT	60.128	38.462	0.00	0.00	38.82	2.57
563	566	5.177511	CCGAAGCTCGCATATCTTTTATTGA	59.822	40.000	0.00	0.00	38.82	2.57
564	567	5.177511	TCCGAAGCTCGCATATCTTTTATTG	59.822	40.000	0.00	0.00	38.82	1.90
565	568	5.297547	TCCGAAGCTCGCATATCTTTTATT	58.702	37.500	0.00	0.00	38.82	1.40
566	569	4.883083	TCCGAAGCTCGCATATCTTTTAT	58.117	39.130	0.00	0.00	38.82	1.40
567	570	4.316205	TCCGAAGCTCGCATATCTTTTA	57.684	40.909	0.00	0.00	38.82	1.52
568	571	3.179443	TCCGAAGCTCGCATATCTTTT	57.821	42.857	0.00	0.00	38.82	2.27
569	572	2.890808	TCCGAAGCTCGCATATCTTT	57.109	45.000	0.00	0.00	38.82	2.52
570	573	2.890808	TTCCGAAGCTCGCATATCTT	57.109	45.000	0.00	0.00	38.82	2.40
571	574	2.890808	TTTCCGAAGCTCGCATATCT	57.109	45.000	0.00	0.00	38.82	1.98
572	575	2.412065	GCATTTCCGAAGCTCGCATATC	60.412	50.000	0.00	0.00	38.82	1.63
573	576	1.532868	GCATTTCCGAAGCTCGCATAT	59.467	47.619	0.00	0.00	38.82	1.78
574	577	0.937304	GCATTTCCGAAGCTCGCATA	59.063	50.000	0.00	0.00	38.82	3.14
575	578	0.745845	AGCATTTCCGAAGCTCGCAT	60.746	50.000	0.00	0.00	38.82	4.73
576	579	1.361668	GAGCATTTCCGAAGCTCGCA	61.362	55.000	6.62	0.00	44.37	5.10
577	580	1.349973	GAGCATTTCCGAAGCTCGC	59.650	57.895	6.62	0.00	44.37	5.03
610	613	1.439679	AGGAAATCGCTCGTTCCAAC	58.560	50.000	12.23	0.00	44.94	3.77
611	614	2.073816	GAAGGAAATCGCTCGTTCCAA	58.926	47.619	12.23	0.00	44.94	3.53
612	615	1.722011	GAAGGAAATCGCTCGTTCCA	58.278	50.000	12.23	0.00	44.94	3.53
614	617	1.393883	GTGGAAGGAAATCGCTCGTTC	59.606	52.381	6.11	6.11	38.76	3.95
615	618	1.439679	GTGGAAGGAAATCGCTCGTT	58.560	50.000	0.00	0.00	0.00	3.85
616	619	0.736325	CGTGGAAGGAAATCGCTCGT	60.736	55.000	0.00	0.00	0.00	4.18
617	620	1.999051	CGTGGAAGGAAATCGCTCG	59.001	57.895	0.00	0.00	0.00	5.03
618	621	1.716172	GCGTGGAAGGAAATCGCTC	59.284	57.895	0.00	0.00	42.88	5.03
619	622	2.100631	CGCGTGGAAGGAAATCGCT	61.101	57.895	0.00	0.00	43.78	4.93
620	623	1.908066	AACGCGTGGAAGGAAATCGC	61.908	55.000	14.98	0.00	42.78	4.58
621	624	0.179225	CAACGCGTGGAAGGAAATCG	60.179	55.000	14.98	0.00	0.00	3.34
622	625	0.872388	ACAACGCGTGGAAGGAAATC	59.128	50.000	23.00	0.00	0.00	2.17
623	626	0.872388	GACAACGCGTGGAAGGAAAT	59.128	50.000	23.00	0.00	0.00	2.17
624	627	1.492319	CGACAACGCGTGGAAGGAAA	61.492	55.000	23.00	0.00	0.00	3.13
625	628	1.952133	CGACAACGCGTGGAAGGAA	60.952	57.895	23.00	0.00	0.00	3.36
626	629	2.355363	CGACAACGCGTGGAAGGA	60.355	61.111	23.00	0.00	0.00	3.36
627	630	3.411351	CCGACAACGCGTGGAAGG	61.411	66.667	23.00	18.41	38.29	3.46
628	631	2.654912	GACCGACAACGCGTGGAAG	61.655	63.158	23.00	13.17	38.29	3.46
629	632	2.659244	GACCGACAACGCGTGGAA	60.659	61.111	23.00	0.00	38.29	3.53
630	633	4.986587	CGACCGACAACGCGTGGA	62.987	66.667	23.00	0.00	38.29	4.02
637	640	3.998672	TCCCTGGCGACCGACAAC	61.999	66.667	0.00	0.00	29.81	3.32
638	641	3.998672	GTCCCTGGCGACCGACAA	61.999	66.667	0.00	0.00	29.81	3.18
640	643	4.436998	CTGTCCCTGGCGACCGAC	62.437	72.222	11.27	3.62	31.35	4.79
641	644	4.671590	TCTGTCCCTGGCGACCGA	62.672	66.667	11.27	8.43	31.35	4.69
642	645	3.649277	CTTCTGTCCCTGGCGACCG	62.649	68.421	11.27	6.62	31.35	4.79
643	646	2.266055	CTTCTGTCCCTGGCGACC	59.734	66.667	11.27	0.00	31.35	4.79
644	647	2.266055	CCTTCTGTCCCTGGCGAC	59.734	66.667	7.99	7.99	0.00	5.19
645	648	3.003173	CCCTTCTGTCCCTGGCGA	61.003	66.667	0.00	0.00	0.00	5.54
646	649	4.785453	GCCCTTCTGTCCCTGGCG	62.785	72.222	0.00	0.00	31.55	5.69
647	650	4.432741	GGCCCTTCTGTCCCTGGC	62.433	72.222	0.00	0.00	41.42	4.85
648	651	3.732849	GGGCCCTTCTGTCCCTGG	61.733	72.222	17.04	0.00	37.08	4.45
649	652	2.935481	TGGGCCCTTCTGTCCCTG	60.935	66.667	25.70	0.00	40.69	4.45
650	653	2.936032	GTGGGCCCTTCTGTCCCT	60.936	66.667	25.70	0.00	40.69	4.20
651	654	4.048470	GGTGGGCCCTTCTGTCCC	62.048	72.222	25.70	7.44	40.47	4.46
667	670	0.962356	ATCTGAAACGCAGCCTTGGG	60.962	55.000	0.00	0.00	44.52	4.12
668	671	0.449388	GATCTGAAACGCAGCCTTGG	59.551	55.000	0.00	0.00	44.52	3.61
669	672	1.129998	CAGATCTGAAACGCAGCCTTG	59.870	52.381	18.34	0.00	44.52	3.61
670	673	1.002430	TCAGATCTGAAACGCAGCCTT	59.998	47.619	23.17	0.00	44.52	4.35
671	674	0.610174	TCAGATCTGAAACGCAGCCT	59.390	50.000	23.17	0.00	44.52	4.58
672	675	1.005340	CTCAGATCTGAAACGCAGCC	58.995	55.000	25.09	0.00	44.52	4.85
673	676	1.005340	CCTCAGATCTGAAACGCAGC	58.995	55.000	25.09	0.00	44.52	5.25
674	677	2.662006	TCCTCAGATCTGAAACGCAG	57.338	50.000	25.09	12.78	46.31	5.18
675	678	3.401033	TTTCCTCAGATCTGAAACGCA	57.599	42.857	25.09	6.98	39.39	5.24
676	679	3.425492	GCTTTTCCTCAGATCTGAAACGC	60.425	47.826	25.09	20.24	39.39	4.84
677	680	3.126000	GGCTTTTCCTCAGATCTGAAACG	59.874	47.826	25.09	15.27	39.39	3.60
678	681	4.331108	AGGCTTTTCCTCAGATCTGAAAC	58.669	43.478	25.09	6.55	43.20	2.78
679	682	4.647564	AGGCTTTTCCTCAGATCTGAAA	57.352	40.909	25.09	15.29	43.20	2.69
680	683	4.532126	TGTAGGCTTTTCCTCAGATCTGAA	59.468	41.667	25.09	9.87	43.20	3.02
681	684	4.096681	TGTAGGCTTTTCCTCAGATCTGA	58.903	43.478	23.75	23.75	43.20	3.27
682	685	4.478206	TGTAGGCTTTTCCTCAGATCTG	57.522	45.455	17.07	17.07	43.20	2.90
683	686	4.718774	TGATGTAGGCTTTTCCTCAGATCT	59.281	41.667	0.00	0.00	43.20	2.75
684	687	4.813697	GTGATGTAGGCTTTTCCTCAGATC	59.186	45.833	0.00	0.00	43.20	2.75
685	688	4.681781	CGTGATGTAGGCTTTTCCTCAGAT	60.682	45.833	0.00	0.00	43.20	2.90
686	689	3.368427	CGTGATGTAGGCTTTTCCTCAGA	60.368	47.826	0.00	0.00	43.20	3.27
687	690	2.932614	CGTGATGTAGGCTTTTCCTCAG	59.067	50.000	0.00	0.00	43.20	3.35
688	691	2.354704	CCGTGATGTAGGCTTTTCCTCA	60.355	50.000	0.00	0.00	43.20	3.86
689	692	2.280628	CCGTGATGTAGGCTTTTCCTC	58.719	52.381	0.00	0.00	43.20	3.71
691	694	1.065709	TCCCGTGATGTAGGCTTTTCC	60.066	52.381	0.00	0.00	0.00	3.13
692	695	2.396590	TCCCGTGATGTAGGCTTTTC	57.603	50.000	0.00	0.00	0.00	2.29
693	696	2.421529	GGATCCCGTGATGTAGGCTTTT	60.422	50.000	0.00	0.00	0.00	2.27
694	697	1.141053	GGATCCCGTGATGTAGGCTTT	59.859	52.381	0.00	0.00	0.00	3.51
695	698	0.759346	GGATCCCGTGATGTAGGCTT	59.241	55.000	0.00	0.00	0.00	4.35
696	699	0.105453	AGGATCCCGTGATGTAGGCT	60.105	55.000	8.55	0.00	0.00	4.58
697	700	0.759346	AAGGATCCCGTGATGTAGGC	59.241	55.000	8.55	0.00	0.00	3.93
698	701	1.344763	GGAAGGATCCCGTGATGTAGG	59.655	57.143	8.55	0.00	40.10	3.18
699	702	2.821991	GGAAGGATCCCGTGATGTAG	57.178	55.000	8.55	0.00	40.10	2.74
709	712	4.093743	GGAGAGAGATTAGGGAAGGATCC	58.906	52.174	2.48	2.48	45.77	3.36
710	713	4.093743	GGGAGAGAGATTAGGGAAGGATC	58.906	52.174	0.00	0.00	0.00	3.36
711	714	3.737613	AGGGAGAGAGATTAGGGAAGGAT	59.262	47.826	0.00	0.00	0.00	3.24
712	715	3.141272	GAGGGAGAGAGATTAGGGAAGGA	59.859	52.174	0.00	0.00	0.00	3.36
713	716	3.506398	GAGGGAGAGAGATTAGGGAAGG	58.494	54.545	0.00	0.00	0.00	3.46
714	717	3.142028	AGGAGGGAGAGAGATTAGGGAAG	59.858	52.174	0.00	0.00	0.00	3.46
715	718	3.116939	CAGGAGGGAGAGAGATTAGGGAA	60.117	52.174	0.00	0.00	0.00	3.97
716	719	2.448961	CAGGAGGGAGAGAGATTAGGGA	59.551	54.545	0.00	0.00	0.00	4.20
717	720	2.448961	TCAGGAGGGAGAGAGATTAGGG	59.551	54.545	0.00	0.00	0.00	3.53
718	721	3.893753	TCAGGAGGGAGAGAGATTAGG	57.106	52.381	0.00	0.00	0.00	2.69
719	722	4.803452	AGTTCAGGAGGGAGAGAGATTAG	58.197	47.826	0.00	0.00	0.00	1.73
720	723	4.890499	AGTTCAGGAGGGAGAGAGATTA	57.110	45.455	0.00	0.00	0.00	1.75
721	724	3.774842	AGTTCAGGAGGGAGAGAGATT	57.225	47.619	0.00	0.00	0.00	2.40
722	725	3.774842	AAGTTCAGGAGGGAGAGAGAT	57.225	47.619	0.00	0.00	0.00	2.75
723	726	4.676799	TTAAGTTCAGGAGGGAGAGAGA	57.323	45.455	0.00	0.00	0.00	3.10
724	727	6.780031	TGATATTAAGTTCAGGAGGGAGAGAG	59.220	42.308	0.00	0.00	0.00	3.20
725	728	6.551601	GTGATATTAAGTTCAGGAGGGAGAGA	59.448	42.308	0.00	0.00	0.00	3.10
726	729	6.239458	GGTGATATTAAGTTCAGGAGGGAGAG	60.239	46.154	0.00	0.00	0.00	3.20
727	730	5.602978	GGTGATATTAAGTTCAGGAGGGAGA	59.397	44.000	0.00	0.00	0.00	3.71
728	731	5.366768	TGGTGATATTAAGTTCAGGAGGGAG	59.633	44.000	0.00	0.00	0.00	4.30
729	732	5.285401	TGGTGATATTAAGTTCAGGAGGGA	58.715	41.667	0.00	0.00	0.00	4.20
730	733	5.630415	TGGTGATATTAAGTTCAGGAGGG	57.370	43.478	0.00	0.00	0.00	4.30
731	734	5.928839	CGATGGTGATATTAAGTTCAGGAGG	59.071	44.000	0.00	0.00	0.00	4.30
732	735	5.406780	GCGATGGTGATATTAAGTTCAGGAG	59.593	44.000	0.00	0.00	0.00	3.69
733	736	5.297547	GCGATGGTGATATTAAGTTCAGGA	58.702	41.667	0.00	0.00	0.00	3.86
734	737	4.452455	GGCGATGGTGATATTAAGTTCAGG	59.548	45.833	0.00	0.00	0.00	3.86
735	738	4.452455	GGGCGATGGTGATATTAAGTTCAG	59.548	45.833	0.00	0.00	0.00	3.02
736	739	4.385825	GGGCGATGGTGATATTAAGTTCA	58.614	43.478	0.00	0.00	0.00	3.18
737	740	3.751698	GGGGCGATGGTGATATTAAGTTC	59.248	47.826	0.00	0.00	0.00	3.01
738	741	3.497942	GGGGGCGATGGTGATATTAAGTT	60.498	47.826	0.00	0.00	0.00	2.66
739	742	2.039879	GGGGGCGATGGTGATATTAAGT	59.960	50.000	0.00	0.00	0.00	2.24
740	743	2.305927	AGGGGGCGATGGTGATATTAAG	59.694	50.000	0.00	0.00	0.00	1.85
741	744	2.039746	CAGGGGGCGATGGTGATATTAA	59.960	50.000	0.00	0.00	0.00	1.40
742	745	1.628340	CAGGGGGCGATGGTGATATTA	59.372	52.381	0.00	0.00	0.00	0.98
743	746	0.401738	CAGGGGGCGATGGTGATATT	59.598	55.000	0.00	0.00	0.00	1.28
744	747	0.473694	TCAGGGGGCGATGGTGATAT	60.474	55.000	0.00	0.00	0.00	1.63
745	748	0.473694	ATCAGGGGGCGATGGTGATA	60.474	55.000	0.00	0.00	0.00	2.15
746	749	1.355718	AATCAGGGGGCGATGGTGAT	61.356	55.000	0.00	0.00	0.00	3.06
747	750	1.983119	GAATCAGGGGGCGATGGTGA	61.983	60.000	0.00	0.00	0.00	4.02
748	751	1.526917	GAATCAGGGGGCGATGGTG	60.527	63.158	0.00	0.00	0.00	4.17
749	752	1.570857	TTGAATCAGGGGGCGATGGT	61.571	55.000	0.00	0.00	0.00	3.55
750	753	1.103398	GTTGAATCAGGGGGCGATGG	61.103	60.000	0.00	0.00	0.00	3.51
751	754	1.439353	CGTTGAATCAGGGGGCGATG	61.439	60.000	0.00	0.00	0.00	3.84
752	755	1.153168	CGTTGAATCAGGGGGCGAT	60.153	57.895	0.00	0.00	0.00	4.58
753	756	2.267642	CGTTGAATCAGGGGGCGA	59.732	61.111	0.00	0.00	0.00	5.54
754	757	2.824041	CCGTTGAATCAGGGGGCG	60.824	66.667	0.00	0.00	0.00	6.13
755	758	2.440247	CCCGTTGAATCAGGGGGC	60.440	66.667	12.14	0.00	41.43	5.80
759	762	1.378514	CCCCACCCGTTGAATCAGG	60.379	63.158	0.00	0.00	0.00	3.86
760	763	2.046285	GCCCCACCCGTTGAATCAG	61.046	63.158	0.00	0.00	0.00	2.90
761	764	2.034999	GCCCCACCCGTTGAATCA	59.965	61.111	0.00	0.00	0.00	2.57
762	765	2.754254	GGCCCCACCCGTTGAATC	60.754	66.667	0.00	0.00	0.00	2.52
763	766	3.264845	AGGCCCCACCCGTTGAAT	61.265	61.111	0.00	0.00	40.58	2.57
764	767	4.278513	CAGGCCCCACCCGTTGAA	62.279	66.667	0.00	0.00	40.58	2.69
778	781	1.497309	TAAACTGAGCCCCACCCAGG	61.497	60.000	0.00	0.00	32.52	4.45
779	782	0.322546	GTAAACTGAGCCCCACCCAG	60.323	60.000	0.00	0.00	0.00	4.45
780	783	1.765074	GTAAACTGAGCCCCACCCA	59.235	57.895	0.00	0.00	0.00	4.51
781	784	1.001269	GGTAAACTGAGCCCCACCC	60.001	63.158	0.00	0.00	0.00	4.61
782	785	0.035343	GAGGTAAACTGAGCCCCACC	60.035	60.000	0.00	0.00	0.00	4.61
783	786	0.690762	TGAGGTAAACTGAGCCCCAC	59.309	55.000	0.00	0.00	0.00	4.61
784	787	1.440618	TTGAGGTAAACTGAGCCCCA	58.559	50.000	0.00	0.00	0.00	4.96
785	788	2.160205	GTTTGAGGTAAACTGAGCCCC	58.840	52.381	0.00	0.00	44.18	5.80
786	789	2.858745	TGTTTGAGGTAAACTGAGCCC	58.141	47.619	0.00	0.00	46.96	5.19
787	790	4.327680	AGATGTTTGAGGTAAACTGAGCC	58.672	43.478	0.00	0.00	46.96	4.70
788	791	5.241662	AGAGATGTTTGAGGTAAACTGAGC	58.758	41.667	0.00	0.00	46.96	4.26
789	792	5.872070	GGAGAGATGTTTGAGGTAAACTGAG	59.128	44.000	0.00	0.00	46.96	3.35
790	793	5.280011	GGGAGAGATGTTTGAGGTAAACTGA	60.280	44.000	0.00	0.00	46.96	3.41
791	794	4.938226	GGGAGAGATGTTTGAGGTAAACTG	59.062	45.833	0.00	0.00	46.96	3.16
792	795	4.019231	GGGGAGAGATGTTTGAGGTAAACT	60.019	45.833	0.00	0.00	46.96	2.66
794	797	4.019321	CAGGGGAGAGATGTTTGAGGTAAA	60.019	45.833	0.00	0.00	0.00	2.01
795	798	3.519510	CAGGGGAGAGATGTTTGAGGTAA	59.480	47.826	0.00	0.00	0.00	2.85
796	799	3.107601	CAGGGGAGAGATGTTTGAGGTA	58.892	50.000	0.00	0.00	0.00	3.08
797	800	1.912043	CAGGGGAGAGATGTTTGAGGT	59.088	52.381	0.00	0.00	0.00	3.85
798	801	2.191400	TCAGGGGAGAGATGTTTGAGG	58.809	52.381	0.00	0.00	0.00	3.86
799	802	4.500499	AATCAGGGGAGAGATGTTTGAG	57.500	45.455	0.00	0.00	0.00	3.02
800	803	4.592942	CAAATCAGGGGAGAGATGTTTGA	58.407	43.478	0.00	0.00	0.00	2.69
801	804	3.129988	GCAAATCAGGGGAGAGATGTTTG	59.870	47.826	0.00	0.00	0.00	2.93
802	805	3.011032	AGCAAATCAGGGGAGAGATGTTT	59.989	43.478	0.00	0.00	0.00	2.83
803	806	2.579860	AGCAAATCAGGGGAGAGATGTT	59.420	45.455	0.00	0.00	0.00	2.71
804	807	2.203584	AGCAAATCAGGGGAGAGATGT	58.796	47.619	0.00	0.00	0.00	3.06
805	808	4.428294	TTAGCAAATCAGGGGAGAGATG	57.572	45.455	0.00	0.00	0.00	2.90
806	809	5.456921	TTTTAGCAAATCAGGGGAGAGAT	57.543	39.130	0.00	0.00	0.00	2.75
807	810	4.927267	TTTTAGCAAATCAGGGGAGAGA	57.073	40.909	0.00	0.00	0.00	3.10
808	811	4.400567	CCTTTTTAGCAAATCAGGGGAGAG	59.599	45.833	0.00	0.00	0.00	3.20
809	812	4.344104	CCTTTTTAGCAAATCAGGGGAGA	58.656	43.478	0.00	0.00	0.00	3.71
810	813	3.448660	CCCTTTTTAGCAAATCAGGGGAG	59.551	47.826	13.33	0.00	37.56	4.30
811	814	3.076785	TCCCTTTTTAGCAAATCAGGGGA	59.923	43.478	17.32	10.07	39.90	4.81
812	815	3.440127	TCCCTTTTTAGCAAATCAGGGG	58.560	45.455	17.32	8.47	39.90	4.79
813	816	5.012046	ACTTTCCCTTTTTAGCAAATCAGGG	59.988	40.000	14.22	14.22	40.42	4.45
814	817	6.101650	ACTTTCCCTTTTTAGCAAATCAGG	57.898	37.500	0.00	0.00	0.00	3.86
815	818	7.436933	AGAACTTTCCCTTTTTAGCAAATCAG	58.563	34.615	0.00	0.00	0.00	2.90
816	819	7.360113	AGAACTTTCCCTTTTTAGCAAATCA	57.640	32.000	0.00	0.00	0.00	2.57
817	820	7.813148	GGTAGAACTTTCCCTTTTTAGCAAATC	59.187	37.037	0.00	0.00	0.00	2.17
818	821	7.509318	AGGTAGAACTTTCCCTTTTTAGCAAAT	59.491	33.333	0.00	0.00	0.00	2.32
819	822	6.837048	AGGTAGAACTTTCCCTTTTTAGCAAA	59.163	34.615	0.00	0.00	0.00	3.68
820	823	6.264518	CAGGTAGAACTTTCCCTTTTTAGCAA	59.735	38.462	0.00	0.00	0.00	3.91
821	824	5.768164	CAGGTAGAACTTTCCCTTTTTAGCA	59.232	40.000	0.00	0.00	0.00	3.49
822	825	5.768662	ACAGGTAGAACTTTCCCTTTTTAGC	59.231	40.000	0.00	0.00	0.00	3.09
823	826	6.430308	GGACAGGTAGAACTTTCCCTTTTTAG	59.570	42.308	0.00	0.00	32.38	1.85
824	827	6.301486	GGACAGGTAGAACTTTCCCTTTTTA	58.699	40.000	0.00	0.00	32.38	1.52
825	828	5.138276	GGACAGGTAGAACTTTCCCTTTTT	58.862	41.667	0.00	0.00	32.38	1.94
826	829	4.726583	GGACAGGTAGAACTTTCCCTTTT	58.273	43.478	0.00	0.00	32.38	2.27
827	830	3.244457	CGGACAGGTAGAACTTTCCCTTT	60.244	47.826	0.00	0.00	34.53	3.11
828	831	2.302157	CGGACAGGTAGAACTTTCCCTT	59.698	50.000	0.00	0.00	34.53	3.95
829	832	1.900486	CGGACAGGTAGAACTTTCCCT	59.100	52.381	0.00	0.00	34.53	4.20
830	833	1.897802	TCGGACAGGTAGAACTTTCCC	59.102	52.381	0.00	0.00	34.53	3.97
831	834	3.672767	TTCGGACAGGTAGAACTTTCC	57.327	47.619	0.00	0.00	34.66	3.13
832	835	5.699458	TCAATTTCGGACAGGTAGAACTTTC	59.301	40.000	0.00	0.00	0.00	2.62
833	836	5.617252	TCAATTTCGGACAGGTAGAACTTT	58.383	37.500	0.00	0.00	0.00	2.66
834	837	5.223449	TCAATTTCGGACAGGTAGAACTT	57.777	39.130	0.00	0.00	0.00	2.66
835	838	4.884668	TCAATTTCGGACAGGTAGAACT	57.115	40.909	0.00	0.00	0.00	3.01
836	839	4.267928	CGATCAATTTCGGACAGGTAGAAC	59.732	45.833	0.00	0.00	35.50	3.01
837	840	4.081862	ACGATCAATTTCGGACAGGTAGAA	60.082	41.667	4.68	0.00	43.33	2.10
838	841	3.446161	ACGATCAATTTCGGACAGGTAGA	59.554	43.478	4.68	0.00	43.33	2.59
839	842	3.782046	ACGATCAATTTCGGACAGGTAG	58.218	45.455	4.68	0.00	43.33	3.18
840	843	3.880047	ACGATCAATTTCGGACAGGTA	57.120	42.857	4.68	0.00	43.33	3.08
841	844	2.742053	CAACGATCAATTTCGGACAGGT	59.258	45.455	4.68	0.00	43.33	4.00
842	845	2.476185	GCAACGATCAATTTCGGACAGG	60.476	50.000	4.68	0.00	43.33	4.00
843	846	2.159430	TGCAACGATCAATTTCGGACAG	59.841	45.455	4.68	0.00	43.33	3.51
844	847	2.147150	TGCAACGATCAATTTCGGACA	58.853	42.857	4.68	0.00	43.33	4.02
845	848	2.892373	TGCAACGATCAATTTCGGAC	57.108	45.000	4.68	0.00	43.33	4.79
846	849	3.196007	GTTGCAACGATCAATTTCGGA	57.804	42.857	14.90	0.00	43.33	4.55
870	873	2.202362	ATAGCTATCTCGCGCGCG	60.202	61.111	44.84	44.84	41.35	6.86
871	874	2.783064	GCATAGCTATCTCGCGCGC	61.783	63.158	27.95	23.91	34.40	6.86
872	875	2.155194	GGCATAGCTATCTCGCGCG	61.155	63.158	26.76	26.76	34.40	6.86
873	876	0.452184	TAGGCATAGCTATCTCGCGC	59.548	55.000	2.34	3.79	34.40	6.86
874	877	3.367607	GAATAGGCATAGCTATCTCGCG	58.632	50.000	2.34	0.00	34.40	5.87
875	878	3.367607	CGAATAGGCATAGCTATCTCGC	58.632	50.000	2.34	4.58	0.00	5.03
876	879	3.181496	TGCGAATAGGCATAGCTATCTCG	60.181	47.826	2.34	6.84	38.17	4.04
877	880	4.377839	TGCGAATAGGCATAGCTATCTC	57.622	45.455	2.34	0.00	38.17	2.75
878	881	4.808414	TTGCGAATAGGCATAGCTATCT	57.192	40.909	2.34	1.56	43.52	1.98
879	882	5.862924	TTTTGCGAATAGGCATAGCTATC	57.137	39.130	2.34	0.00	43.52	2.08
899	902	4.340950	TGCCTTGTTCGGAATTCTCTTTTT	59.659	37.500	5.23	0.00	0.00	1.94
900	903	3.888930	TGCCTTGTTCGGAATTCTCTTTT	59.111	39.130	5.23	0.00	0.00	2.27
901	904	3.486383	TGCCTTGTTCGGAATTCTCTTT	58.514	40.909	5.23	0.00	0.00	2.52
902	905	3.140325	TGCCTTGTTCGGAATTCTCTT	57.860	42.857	5.23	0.00	0.00	2.85
903	906	2.859165	TGCCTTGTTCGGAATTCTCT	57.141	45.000	5.23	0.00	0.00	3.10
904	907	3.274288	AGATGCCTTGTTCGGAATTCTC	58.726	45.455	5.23	0.00	0.00	2.87
905	908	3.356529	AGATGCCTTGTTCGGAATTCT	57.643	42.857	5.23	0.00	0.00	2.40
906	909	3.762779	CAAGATGCCTTGTTCGGAATTC	58.237	45.455	0.00	0.00	43.60	2.17
907	910	3.855689	CAAGATGCCTTGTTCGGAATT	57.144	42.857	0.00	0.00	43.60	2.17
960	963	0.249120	CCAGACCACACGGCTCATTA	59.751	55.000	0.00	0.00	34.57	1.90
1022	1025	2.517402	TGGTGCGGGTGTGGTTTC	60.517	61.111	0.00	0.00	0.00	2.78
1413	1425	2.627945	TCCAACGACTGAACATATGCC	58.372	47.619	1.58	0.00	0.00	4.40
1437	1449	2.635444	CGTCAAACGCGTCATTTTTCT	58.365	42.857	14.44	0.00	33.65	2.52
1474	1486	3.075641	GTCACGTCCCCTCCCCTC	61.076	72.222	0.00	0.00	0.00	4.30
1496	1522	5.405935	AATTCCCAAACAAGATAGGCAAC	57.594	39.130	0.00	0.00	0.00	4.17
1501	1527	6.587608	GCAACTCAAATTCCCAAACAAGATAG	59.412	38.462	0.00	0.00	0.00	2.08
1528	1801	5.922544	ACATGAACTAACAAAAGCAGCATTC	59.077	36.000	0.00	0.00	0.00	2.67
1571	1883	4.133078	CTCAGCAGTATTTCCTCCATTCC	58.867	47.826	0.00	0.00	0.00	3.01
1636	1948	8.432013	TGGCATAATTAGGGCAGATATATACAG	58.568	37.037	20.80	0.00	37.63	2.74
1644	1956	9.359653	GATTATTATGGCATAATTAGGGCAGAT	57.640	33.333	31.33	23.43	45.44	2.90
1645	1957	8.335484	TGATTATTATGGCATAATTAGGGCAGA	58.665	33.333	31.33	21.68	45.44	4.26
1646	1958	8.523915	TGATTATTATGGCATAATTAGGGCAG	57.476	34.615	31.33	0.89	45.44	4.85
1803	2305	4.873746	TCCAAGAGAACAGTCCTAACAG	57.126	45.455	0.00	0.00	0.00	3.16
1854	2356	2.879026	CTCAGCCATGTGAATGAGATGG	59.121	50.000	7.55	0.00	46.49	3.51
2045	2547	3.054802	ACTCAGGGCTGAATTTACTCCAG	60.055	47.826	0.00	0.00	39.39	3.86
2146	2651	1.303309	GAACAGGCCGATTCTGATGG	58.697	55.000	13.20	0.00	36.22	3.51
2147	2652	0.933097	CGAACAGGCCGATTCTGATG	59.067	55.000	16.94	2.08	36.22	3.07
2163	2668	0.105224	TCAACGAGGGCAGTTTCGAA	59.895	50.000	0.00	0.00	39.93	3.71
2237	2743	2.672874	TCACGCAATTAGCATCACAGTC	59.327	45.455	0.00	0.00	46.13	3.51
2269	2775	4.128643	CACAAGTCACGTACCCCTAAAAA	58.871	43.478	0.00	0.00	0.00	1.94
2270	2776	3.494749	CCACAAGTCACGTACCCCTAAAA	60.495	47.826	0.00	0.00	0.00	1.52
2292	2809	2.092323	GCCATGGACTTGGAAACCTAC	58.908	52.381	18.40	0.00	39.25	3.18
2336	2853	1.665442	CCAAGAAAACCCAAGCCGG	59.335	57.895	0.00	0.00	0.00	6.13
2385	2902	3.147629	CCCCGGTATCCTATCTATAGCG	58.852	54.545	0.00	7.50	45.58	4.26
2387	2904	3.498334	GCCCCCGGTATCCTATCTATAG	58.502	54.545	0.00	0.00	0.00	1.31
2413	2930	3.548770	TCCAAATCAGATAGCAGGCTTG	58.451	45.455	0.00	0.00	0.00	4.01
2414	2931	3.939740	TCCAAATCAGATAGCAGGCTT	57.060	42.857	0.00	0.00	0.00	4.35
2415	2932	3.939740	TTCCAAATCAGATAGCAGGCT	57.060	42.857	0.00	0.00	0.00	4.58
2416	2933	3.505293	GGATTCCAAATCAGATAGCAGGC	59.495	47.826	0.00	0.00	0.00	4.85
2417	2934	3.750130	CGGATTCCAAATCAGATAGCAGG	59.250	47.826	3.09	0.00	0.00	4.85
2418	2935	3.188048	GCGGATTCCAAATCAGATAGCAG	59.812	47.826	3.09	0.00	0.00	4.24
2419	2936	3.141398	GCGGATTCCAAATCAGATAGCA	58.859	45.455	3.09	0.00	0.00	3.49
2420	2937	3.406764	AGCGGATTCCAAATCAGATAGC	58.593	45.455	3.09	0.00	0.00	2.97
2421	2938	7.776107	TCTATAGCGGATTCCAAATCAGATAG	58.224	38.462	3.09	4.12	0.00	2.08
2422	2939	7.718334	TCTATAGCGGATTCCAAATCAGATA	57.282	36.000	3.09	2.85	0.00	1.98
2423	2940	6.611613	TCTATAGCGGATTCCAAATCAGAT	57.388	37.500	3.09	0.78	0.00	2.90
2424	2941	6.611613	ATCTATAGCGGATTCCAAATCAGA	57.388	37.500	3.09	0.10	0.00	3.27
2425	2942	6.983307	CCTATCTATAGCGGATTCCAAATCAG	59.017	42.308	3.09	0.00	0.00	2.90
2426	2943	6.667848	TCCTATCTATAGCGGATTCCAAATCA	59.332	38.462	3.09	0.00	0.00	2.57
2427	2944	7.113658	TCCTATCTATAGCGGATTCCAAATC	57.886	40.000	3.09	0.00	0.00	2.17
2428	2945	7.682787	ATCCTATCTATAGCGGATTCCAAAT	57.317	36.000	3.09	0.00	32.52	2.32
2429	2946	7.069578	GGTATCCTATCTATAGCGGATTCCAAA	59.930	40.741	22.16	7.80	40.90	3.28
2430	2947	6.550108	GGTATCCTATCTATAGCGGATTCCAA	59.450	42.308	22.16	8.03	40.90	3.53
2431	2948	6.069331	GGTATCCTATCTATAGCGGATTCCA	58.931	44.000	22.16	8.26	40.90	3.53
2432	2949	5.181622	CGGTATCCTATCTATAGCGGATTCC	59.818	48.000	19.71	19.71	43.50	3.01
2433	2950	6.243811	CGGTATCCTATCTATAGCGGATTC	57.756	45.833	17.56	13.99	43.50	2.52
2438	2955	3.147629	CCCCGGTATCCTATCTATAGCG	58.852	54.545	0.00	7.50	45.58	4.26
2439	2956	3.498334	CCCCCGGTATCCTATCTATAGC	58.502	54.545	0.00	0.00	0.00	2.97
2440	2957	3.498334	GCCCCCGGTATCCTATCTATAG	58.502	54.545	0.00	0.00	0.00	1.31
2441	2958	2.178544	GGCCCCCGGTATCCTATCTATA	59.821	54.545	0.00	0.00	0.00	1.31
2442	2959	1.062352	GGCCCCCGGTATCCTATCTAT	60.062	57.143	0.00	0.00	0.00	1.98
2443	2960	0.337428	GGCCCCCGGTATCCTATCTA	59.663	60.000	0.00	0.00	0.00	1.98
2444	2961	1.080538	GGCCCCCGGTATCCTATCT	59.919	63.158	0.00	0.00	0.00	1.98
2445	2962	1.080538	AGGCCCCCGGTATCCTATC	59.919	63.158	0.00	0.00	0.00	2.08
2446	2963	1.229529	CAGGCCCCCGGTATCCTAT	60.230	63.158	0.00	0.00	0.00	2.57
2447	2964	2.203182	CAGGCCCCCGGTATCCTA	59.797	66.667	0.00	0.00	0.00	2.94
2448	2965	4.900259	CCAGGCCCCCGGTATCCT	62.900	72.222	0.00	0.00	0.00	3.24
2458	2975	2.441035	AAAGGGTACTTGCCAGGCCC	62.441	60.000	9.64	10.53	38.81	5.80
2506	3025	7.350744	CTAATCTAGCATCTCTCATGCCTAT	57.649	40.000	2.93	0.00	45.59	2.57
2754	3399	1.466167	CAATTCTCAAGTCGGTGCTGG	59.534	52.381	0.00	0.00	0.00	4.85
2845	3490	3.311871	AGAATTGCATGCATCTCGTTCTC	59.688	43.478	23.37	9.10	0.00	2.87
2911	3557	6.403527	CCATACTGTGTGGTGTTACATCATTG	60.404	42.308	14.74	0.00	32.43	2.82
2912	3558	5.647658	CCATACTGTGTGGTGTTACATCATT	59.352	40.000	14.74	0.00	32.43	2.57
2969	3615	5.003160	TCCTTGATGATCTTCGAGCAAAAA	58.997	37.500	16.96	0.00	29.85	1.94
2983	3629	2.687297	CATCCCCTCTCTCCTTGATGA	58.313	52.381	0.00	0.00	33.20	2.92
3025	3671	0.680618	ATCAACCCGTACGTCCACAA	59.319	50.000	15.21	0.00	0.00	3.33
3026	3672	1.473677	CTATCAACCCGTACGTCCACA	59.526	52.381	15.21	0.00	0.00	4.17
3027	3673	1.800286	GCTATCAACCCGTACGTCCAC	60.800	57.143	15.21	0.00	0.00	4.02
3029	3675	0.249197	GGCTATCAACCCGTACGTCC	60.249	60.000	15.21	0.00	0.00	4.79
3030	3676	0.457035	TGGCTATCAACCCGTACGTC	59.543	55.000	15.21	0.00	0.00	4.34
3031	3677	0.174162	GTGGCTATCAACCCGTACGT	59.826	55.000	15.21	0.00	0.00	3.57
3049	3701	3.944250	CTGGCGCCAAGGGATTGGT	62.944	63.158	32.09	0.00	43.90	3.67
3128	3780	8.287503	GGAATGCCTATAATTTCGAAAATACGT	58.712	33.333	15.66	0.00	34.70	3.57
3132	3784	8.137437	CACAGGAATGCCTATAATTTCGAAAAT	58.863	33.333	15.66	9.39	44.80	1.82
3198	3850	5.364446	TCCAACTTCTCTGTGTAAAGGTGTA	59.636	40.000	0.00	0.00	36.25	2.90
3245	3897	5.597594	TGTGAGTGATGAGAGCTTCTATGAT	59.402	40.000	0.00	0.00	0.00	2.45
3303	3955	0.623723	AATAGTGTTCGGCATGGGGT	59.376	50.000	0.00	0.00	0.00	4.95
3347	3999	1.825474	CACTGATGAGTACGAAGGGGT	59.175	52.381	0.00	0.00	0.00	4.95
3386	4038	2.307098	ACAGCTTGCTAACTTCCCTGAT	59.693	45.455	0.00	0.00	0.00	2.90
3594	4246	5.832060	GGATCATGAAGGACCAAATGAATCT	59.168	40.000	0.00	0.00	33.06	2.40
3898	4550	0.464036	AAGGCCGAGTGATTGCGATA	59.536	50.000	0.00	0.00	0.00	2.92
3904	4556	3.274288	GAATCAAGAAGGCCGAGTGATT	58.726	45.455	20.14	20.14	40.65	2.57
3906	4558	1.066143	GGAATCAAGAAGGCCGAGTGA	60.066	52.381	0.00	0.00	0.00	3.41
4072	4732	4.284550	TTCTGCCACCCCACCTGC	62.285	66.667	0.00	0.00	0.00	4.85
4133	4794	2.513204	CCATCAGCTGCTCGTGGG	60.513	66.667	17.78	6.81	0.00	4.61
4149	4810	0.820871	AGTCTGCGGAACATCTCTCC	59.179	55.000	0.00	0.00	0.00	3.71
4203	4864	9.513906	TCCACATGATAACTGAATCAAGTAAAA	57.486	29.630	0.00	0.00	39.25	1.52
4262	4923	5.710099	GGAGTTCCTGAATTAATGTGGTTCA	59.290	40.000	0.00	0.00	0.00	3.18
4289	4950	1.948834	GCTTTGCACTGGCCAAATTTT	59.051	42.857	7.01	0.00	40.13	1.82
4291	4952	0.760572	AGCTTTGCACTGGCCAAATT	59.239	45.000	7.01	0.00	40.13	1.82
4292	4953	0.034337	CAGCTTTGCACTGGCCAAAT	59.966	50.000	7.01	0.00	40.13	2.32
4294	4955	3.131155	CAGCTTTGCACTGGCCAA	58.869	55.556	7.01	0.00	40.13	4.52
4339	5000	4.940046	TGATGAAAAGCTGCAAACCAAAAA	59.060	33.333	1.02	0.00	0.00	1.94
4368	5029	7.891183	AGTAGGCTAGTATTACTGTGATGCTAT	59.109	37.037	10.01	0.83	0.00	2.97
4382	5043	3.074687	TGCAGCTCCTAGTAGGCTAGTAT	59.925	47.826	11.75	0.00	42.35	2.12
4447	5749	6.418226	GTCTAGCACGTAATTAGACATCCAAG	59.582	42.308	19.94	0.00	41.71	3.61
4518	5820	7.435192	GCTTGAGCCACATGGTAAAATAATTAC	59.565	37.037	0.00	0.00	37.57	1.89
4570	5872	6.316390	AGGTGCTAAAAATACAAAGATCGGAG	59.684	38.462	0.00	0.00	0.00	4.63
4605	5907	4.889409	TGACCTGAACAAAGAAAATGCTCT	59.111	37.500	0.00	0.00	0.00	4.09
4646	5948	2.740452	AGACGTTTCTCCTGAACGTTC	58.260	47.619	21.42	21.42	38.75	3.95
4721	6023	0.387622	CAGCTTTGTCAATGCACCGG	60.388	55.000	21.56	0.00	34.29	5.28
4890	6192	1.128188	ACCTCCTCGAAACCCTGCTT	61.128	55.000	0.00	0.00	0.00	3.91
4967	6269	2.233431	AGTTGCTTCTAGCTGACTCTGG	59.767	50.000	0.00	0.00	42.97	3.86
5009	6311	5.168569	TCATTTGTATCCACGACTTCAGTC	58.831	41.667	0.00	0.00	41.47	3.51
5083	6385	7.834181	AGCTACAGAACCACATTTACCATTAAT	59.166	33.333	0.00	0.00	0.00	1.40
5251	6553	9.226606	TGTGTCCCTTTTCTAGTAACATATTTG	57.773	33.333	0.00	0.00	0.00	2.32
5339	6641	1.376424	CTTCAGTCTGCCATGCCGT	60.376	57.895	0.00	0.00	0.00	5.68
5340	6642	0.108186	TACTTCAGTCTGCCATGCCG	60.108	55.000	0.00	0.00	0.00	5.69
5342	6644	2.393271	AGTACTTCAGTCTGCCATGC	57.607	50.000	0.00	0.00	0.00	4.06
5427	6774	6.658816	TCATTGTAACACCTATGCAGACAATT	59.341	34.615	0.00	0.00	35.27	2.32
5428	6775	6.179756	TCATTGTAACACCTATGCAGACAAT	58.820	36.000	0.00	0.00	36.70	2.71
5450	6797	8.680001	CATGAAGGAGATGACATTTTACATTCA	58.320	33.333	0.00	0.00	0.00	2.57
5457	6805	6.540438	AATGCATGAAGGAGATGACATTTT	57.460	33.333	0.00	0.00	30.30	1.82
5551	7005	7.600065	AGTTGTAGTCGTATGTGAATAAGTGT	58.400	34.615	0.00	0.00	0.00	3.55
5581	7035	8.419442	AGAAAATGGCCTATCTGAAATTGATTC	58.581	33.333	3.32	0.00	38.60	2.52
5740	7195	3.551846	TGTTCTGAGAAAAAGGGGTCAC	58.448	45.455	0.00	0.00	0.00	3.67
5816	7274	6.198029	CGAAATTAACAAGTCATTGCAACACA	59.802	34.615	0.00	0.00	40.27	3.72
5868	7326	3.646162	ACACCTCAATCCTGACACTTACA	59.354	43.478	0.00	0.00	0.00	2.41
5869	7327	4.273148	ACACCTCAATCCTGACACTTAC	57.727	45.455	0.00	0.00	0.00	2.34
5898	7356	3.955471	TGAATGGGCTAGAAGAACTTGG	58.045	45.455	0.00	0.00	0.00	3.61
5904	7362	4.908601	TTCAGTTGAATGGGCTAGAAGA	57.091	40.909	0.00	0.00	0.00	2.87
5905	7363	5.416952	ACATTTCAGTTGAATGGGCTAGAAG	59.583	40.000	0.00	0.00	33.54	2.85
5939	7397	2.802816	GCGTTTATCCTGTCAGGCATAG	59.197	50.000	14.64	4.53	34.61	2.23
5943	7401	1.739067	AAGCGTTTATCCTGTCAGGC	58.261	50.000	14.64	0.32	34.61	4.85
5959	7417	2.869192	GCTACAACTCCAGCTGATAAGC	59.131	50.000	17.39	9.99	34.86	3.09
5983	7441	6.047870	AGATGTAACAGAAATCAGCTAGCAG	58.952	40.000	18.83	9.54	0.00	4.24
5986	7444	8.484641	TTTGAGATGTAACAGAAATCAGCTAG	57.515	34.615	0.00	0.00	0.00	3.42

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.