Multiple sequence alignment - TraesCS2B01G238800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G238800 chr2B 100.000 4141 0 0 1 4141 240305091 240309231 0.000000e+00 7648.0
1 TraesCS2B01G238800 chr2B 95.000 340 17 0 2625 2964 115850630 115850969 6.090000e-148 534.0
2 TraesCS2B01G238800 chr2B 100.000 54 0 0 3195 3248 240308232 240308285 2.630000e-17 100.0
3 TraesCS2B01G238800 chr2B 100.000 54 0 0 3142 3195 240308285 240308338 2.630000e-17 100.0
4 TraesCS2B01G238800 chr2B 100.000 29 0 0 1462 1490 240306483 240306511 2.000000e-03 54.7
5 TraesCS2B01G238800 chr2B 100.000 29 0 0 1393 1421 240306552 240306580 2.000000e-03 54.7
6 TraesCS2B01G238800 chr2A 91.127 1499 76 25 1 1465 199576511 199577986 0.000000e+00 1978.0
7 TraesCS2B01G238800 chr2A 92.092 961 37 17 3195 4141 199581793 199582728 0.000000e+00 1317.0
8 TraesCS2B01G238800 chr2A 91.791 804 26 13 1487 2283 199578222 199578992 0.000000e+00 1083.0
9 TraesCS2B01G238800 chr2A 93.529 340 21 1 2628 2966 772827851 772827512 4.780000e-139 505.0
10 TraesCS2B01G238800 chr2A 93.789 161 4 3 3023 3178 199581670 199581829 1.920000e-58 237.0
11 TraesCS2B01G238800 chr2A 90.625 128 12 0 2503 2630 199581510 199581637 1.980000e-38 171.0
12 TraesCS2B01G238800 chr2D 91.020 980 33 11 3195 4141 186959484 186960441 0.000000e+00 1271.0
13 TraesCS2B01G238800 chr2D 91.286 700 34 7 722 1420 186957363 186958036 0.000000e+00 929.0
14 TraesCS2B01G238800 chr2D 90.616 682 42 11 1610 2284 186958294 186958960 0.000000e+00 885.0
15 TraesCS2B01G238800 chr2D 89.331 478 41 6 1 473 186953557 186954029 3.560000e-165 592.0
16 TraesCS2B01G238800 chr2D 90.726 248 20 2 478 725 186954158 186954402 1.110000e-85 327.0
17 TraesCS2B01G238800 chr2D 87.111 225 23 3 2959 3178 186959297 186959520 2.470000e-62 250.0
18 TraesCS2B01G238800 chr2D 94.558 147 8 0 2423 2569 186959108 186959254 1.160000e-55 228.0
19 TraesCS2B01G238800 chr2D 94.175 103 4 1 2305 2405 186958950 186959052 5.540000e-34 156.0
20 TraesCS2B01G238800 chr3B 98.235 340 5 1 2625 2963 136797510 136797849 9.910000e-166 593.0
21 TraesCS2B01G238800 chr3B 92.582 337 23 2 2628 2963 226964340 226964005 2.240000e-132 483.0
22 TraesCS2B01G238800 chr4B 97.923 337 6 1 2628 2963 535244169 535243833 2.150000e-162 582.0
23 TraesCS2B01G238800 chr4B 96.933 326 9 1 2640 2964 175558659 175558334 2.810000e-151 545.0
24 TraesCS2B01G238800 chr7B 93.714 350 20 2 2625 2972 556335274 556335623 1.320000e-144 523.0
25 TraesCS2B01G238800 chr1B 94.100 339 19 1 2625 2963 470423255 470423592 7.940000e-142 514.0
26 TraesCS2B01G238800 chr7A 92.962 341 23 1 2625 2964 705676582 705676922 2.880000e-136 496.0
27 TraesCS2B01G238800 chr7D 85.526 76 7 3 1534 1609 546775637 546775708 4.440000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G238800 chr2B 240305091 240309231 4140 False 1591.48 7648 100.000000 1 4141 5 chr2B.!!$F2 4140
1 TraesCS2B01G238800 chr2A 199576511 199582728 6217 False 957.20 1978 91.884800 1 4141 5 chr2A.!!$F1 4140
2 TraesCS2B01G238800 chr2D 186953557 186960441 6884 False 579.75 1271 91.102875 1 4141 8 chr2D.!!$F1 4140

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
726 3828 0.407528 TTTGGCATGAGGGGTTAGCA 59.592 50.0 0.00 0.00 0.00 3.49 F
2034 5397 0.037590 CAAAGTTGACCCGGGATGGA 59.962 55.0 32.02 7.04 42.00 3.41 F
2687 8410 0.098025 CTTCAGACTCGTCTCGGCTC 59.902 60.0 0.00 0.00 37.98 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2668 8391 0.098025 GAGCCGAGACGAGTCTGAAG 59.902 60.0 10.82 2.24 40.61 3.02 R
3027 8750 0.034863 GGGGCACAAGGAATACCGAA 60.035 55.0 0.00 0.00 41.83 4.30 R
3594 9349 0.250858 TGAATGGCCTGTCACCAGTG 60.251 55.0 3.32 0.00 41.46 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 119 6.238676 CCAGATGATGCTTATATATTGCTGCC 60.239 42.308 0.00 3.04 0.00 4.85
140 141 6.017109 TGCCATCTGAAGTGAAAACTCTTAAC 60.017 38.462 0.00 0.00 0.00 2.01
207 209 3.375299 GCACGCAAGGTCAATCTTTCTAT 59.625 43.478 0.00 0.00 46.39 1.98
278 280 8.969121 TCTAATTTTGTTATGAATGTGTGCAG 57.031 30.769 0.00 0.00 0.00 4.41
353 359 6.585389 CTCGTTAGGAACTTAATTAGGTGC 57.415 41.667 0.37 0.00 41.75 5.01
384 390 2.235155 TGGAATAGACCAGTAGCGCAAA 59.765 45.455 11.47 0.00 34.77 3.68
401 407 9.845305 GTAGCGCAAACTAACTATATTTACTTG 57.155 33.333 11.47 0.00 0.00 3.16
403 409 7.280205 AGCGCAAACTAACTATATTTACTTGCT 59.720 33.333 11.47 0.00 0.00 3.91
469 475 4.023536 GTGACGGGTGAAGAAATAGCAAAA 60.024 41.667 0.00 0.00 0.00 2.44
474 480 7.257722 ACGGGTGAAGAAATAGCAAAATAATG 58.742 34.615 0.00 0.00 0.00 1.90
475 481 7.122055 ACGGGTGAAGAAATAGCAAAATAATGA 59.878 33.333 0.00 0.00 0.00 2.57
476 482 8.137437 CGGGTGAAGAAATAGCAAAATAATGAT 58.863 33.333 0.00 0.00 0.00 2.45
516 646 6.037172 ACATTATGTTGGCTTTATCAGACGAC 59.963 38.462 0.00 0.00 44.89 4.34
529 661 8.454570 TTTATCAGACGACATATAGTACCACA 57.545 34.615 0.00 0.00 0.00 4.17
633 765 1.892468 CACAACGACCTACTAGCGTC 58.108 55.000 0.00 0.00 37.26 5.19
687 825 2.437085 AGTGCCCTTGCCCTTATAAC 57.563 50.000 0.00 0.00 36.33 1.89
726 3828 0.407528 TTTGGCATGAGGGGTTAGCA 59.592 50.000 0.00 0.00 0.00 3.49
820 3922 6.228273 AGACAATGTATGAATAAATCGCGG 57.772 37.500 6.13 0.00 0.00 6.46
822 3924 4.158384 CAATGTATGAATAAATCGCGGGC 58.842 43.478 6.13 0.00 0.00 6.13
858 3960 5.185056 AGTTTGGTCTTTTGTGTTAGCAAGT 59.815 36.000 0.00 0.00 31.71 3.16
860 3962 6.371809 TTGGTCTTTTGTGTTAGCAAGTAG 57.628 37.500 0.00 0.00 0.00 2.57
872 3977 3.045601 AGCAAGTAGTAGCAAGTGGTG 57.954 47.619 0.00 0.00 0.00 4.17
966 4071 3.273434 CAGCTGGTGCAAGAAATAGCTA 58.727 45.455 5.57 0.00 39.29 3.32
1446 4577 1.891919 GCAGTGCGTTGACCTTGGA 60.892 57.895 0.00 0.00 0.00 3.53
1480 4613 3.483869 GCTGGGTAGGCAGGGGAG 61.484 72.222 0.00 0.00 0.00 4.30
1481 4614 2.041265 CTGGGTAGGCAGGGGAGT 59.959 66.667 0.00 0.00 0.00 3.85
1483 4616 2.040606 GGGTAGGCAGGGGAGTGA 59.959 66.667 0.00 0.00 0.00 3.41
1484 4617 2.368011 GGGTAGGCAGGGGAGTGAC 61.368 68.421 0.00 0.00 0.00 3.67
1485 4618 2.368011 GGTAGGCAGGGGAGTGACC 61.368 68.421 0.00 0.00 38.08 4.02
1486 4619 1.612442 GTAGGCAGGGGAGTGACCA 60.612 63.158 0.00 0.00 41.20 4.02
1487 4620 0.983378 GTAGGCAGGGGAGTGACCAT 60.983 60.000 0.00 0.00 41.20 3.55
1488 4621 0.691078 TAGGCAGGGGAGTGACCATC 60.691 60.000 0.00 0.00 41.20 3.51
1531 4883 4.072131 TCCAATCTACTCACCAAAACAGC 58.928 43.478 0.00 0.00 0.00 4.40
1532 4884 4.074970 CCAATCTACTCACCAAAACAGCT 58.925 43.478 0.00 0.00 0.00 4.24
1552 4904 3.545426 GCTTGTCGGTACAAAGAACACAC 60.545 47.826 0.00 0.00 44.79 3.82
1557 4909 5.048921 TGTCGGTACAAAGAACACACAAAAA 60.049 36.000 0.00 0.00 30.91 1.94
1603 4955 2.223829 CCATAGACCACCTAGCAACGAG 60.224 54.545 0.00 0.00 0.00 4.18
1683 5036 0.672401 TTTGGCTCGATCGAACCCAC 60.672 55.000 29.52 14.14 29.74 4.61
1700 5059 2.225019 CCCACGCATTGCTGAGATATTC 59.775 50.000 7.12 0.00 0.00 1.75
1701 5060 3.136763 CCACGCATTGCTGAGATATTCT 58.863 45.455 7.12 0.00 0.00 2.40
1704 5063 5.449588 CCACGCATTGCTGAGATATTCTTTT 60.450 40.000 7.12 0.00 0.00 2.27
1708 5067 6.138761 GCATTGCTGAGATATTCTTTTACCG 58.861 40.000 0.16 0.00 0.00 4.02
2034 5397 0.037590 CAAAGTTGACCCGGGATGGA 59.962 55.000 32.02 7.04 42.00 3.41
2112 5475 3.503748 AGCCTACACAAGCAGTTGATTTC 59.496 43.478 0.00 0.00 37.10 2.17
2114 5477 4.614535 GCCTACACAAGCAGTTGATTTCAG 60.615 45.833 0.00 0.00 37.10 3.02
2115 5478 3.360249 ACACAAGCAGTTGATTTCAGC 57.640 42.857 0.00 0.00 37.10 4.26
2116 5479 2.954318 ACACAAGCAGTTGATTTCAGCT 59.046 40.909 0.00 0.00 37.94 4.24
2117 5480 3.382546 ACACAAGCAGTTGATTTCAGCTT 59.617 39.130 0.00 0.00 45.54 3.74
2119 5482 3.655276 AAGCAGTTGATTTCAGCTTGG 57.345 42.857 0.00 0.00 43.25 3.61
2120 5483 2.590821 AGCAGTTGATTTCAGCTTGGT 58.409 42.857 0.00 0.00 35.16 3.67
2121 5484 3.754965 AGCAGTTGATTTCAGCTTGGTA 58.245 40.909 0.00 0.00 35.16 3.25
2122 5485 4.338879 AGCAGTTGATTTCAGCTTGGTAT 58.661 39.130 0.00 0.00 35.16 2.73
2123 5486 4.157289 AGCAGTTGATTTCAGCTTGGTATG 59.843 41.667 0.00 0.00 35.16 2.39
2124 5487 4.156556 GCAGTTGATTTCAGCTTGGTATGA 59.843 41.667 0.00 0.00 35.16 2.15
2125 5488 5.163581 GCAGTTGATTTCAGCTTGGTATGAT 60.164 40.000 0.00 0.00 35.16 2.45
2126 5489 6.626623 GCAGTTGATTTCAGCTTGGTATGATT 60.627 38.462 0.00 0.00 35.16 2.57
2127 5490 7.415541 GCAGTTGATTTCAGCTTGGTATGATTA 60.416 37.037 0.00 0.00 35.16 1.75
2128 5491 8.627403 CAGTTGATTTCAGCTTGGTATGATTAT 58.373 33.333 0.00 0.00 35.16 1.28
2129 5492 8.844244 AGTTGATTTCAGCTTGGTATGATTATC 58.156 33.333 0.00 0.00 33.50 1.75
2130 5493 8.844244 GTTGATTTCAGCTTGGTATGATTATCT 58.156 33.333 0.00 0.00 0.00 1.98
2132 5495 9.716531 TGATTTCAGCTTGGTATGATTATCTAG 57.283 33.333 0.00 0.00 0.00 2.43
2133 5496 9.717942 GATTTCAGCTTGGTATGATTATCTAGT 57.282 33.333 0.00 0.00 0.00 2.57
2218 5603 0.525668 CCACGTCACGGCATCTAGTC 60.526 60.000 0.35 0.00 0.00 2.59
2219 5604 0.452184 CACGTCACGGCATCTAGTCT 59.548 55.000 0.35 0.00 0.00 3.24
2280 5666 6.942532 AAAATTGCACTAACAGAGTCAAGA 57.057 33.333 0.00 0.00 35.64 3.02
2281 5667 6.942532 AAATTGCACTAACAGAGTCAAGAA 57.057 33.333 0.00 0.00 35.64 2.52
2282 5668 7.516198 AAATTGCACTAACAGAGTCAAGAAT 57.484 32.000 0.00 0.00 35.64 2.40
2283 5669 7.516198 AATTGCACTAACAGAGTCAAGAATT 57.484 32.000 0.00 0.00 35.64 2.17
2284 5670 6.942532 TTGCACTAACAGAGTCAAGAATTT 57.057 33.333 0.00 0.00 35.64 1.82
2285 5671 6.942532 TGCACTAACAGAGTCAAGAATTTT 57.057 33.333 0.00 0.00 35.64 1.82
2286 5672 8.445275 TTGCACTAACAGAGTCAAGAATTTTA 57.555 30.769 0.00 0.00 35.64 1.52
2287 5673 8.621532 TGCACTAACAGAGTCAAGAATTTTAT 57.378 30.769 0.00 0.00 35.64 1.40
2288 5674 9.066892 TGCACTAACAGAGTCAAGAATTTTATT 57.933 29.630 0.00 0.00 35.64 1.40
2289 5675 9.899226 GCACTAACAGAGTCAAGAATTTTATTT 57.101 29.630 0.00 0.00 35.64 1.40
2388 5778 4.558226 ACATCAGCAGAACTACAATGGA 57.442 40.909 0.00 0.00 0.00 3.41
2392 5786 2.744202 CAGCAGAACTACAATGGACCAC 59.256 50.000 0.00 0.00 0.00 4.16
2468 5900 1.065418 CACCAGTCACCACCCCTATTC 60.065 57.143 0.00 0.00 0.00 1.75
2470 5902 1.210478 CCAGTCACCACCCCTATTCTG 59.790 57.143 0.00 0.00 0.00 3.02
2523 8240 6.606234 TGCTTTATCGTTAGTCAAAACACA 57.394 33.333 0.00 0.00 0.00 3.72
2527 8244 3.955771 TCGTTAGTCAAAACACAAGCC 57.044 42.857 0.00 0.00 0.00 4.35
2528 8245 3.537580 TCGTTAGTCAAAACACAAGCCT 58.462 40.909 0.00 0.00 0.00 4.58
2574 8291 1.153489 CCTGATGCGTGCTGCTAGT 60.153 57.895 0.00 0.00 46.63 2.57
2630 8353 5.927954 TTAGTGGTACAAAAATCACGGAC 57.072 39.130 0.00 0.00 44.16 4.79
2631 8354 2.803956 AGTGGTACAAAAATCACGGACG 59.196 45.455 0.00 0.00 44.16 4.79
2632 8355 2.096119 GTGGTACAAAAATCACGGACGG 60.096 50.000 0.00 0.00 44.16 4.79
2633 8356 1.135888 GGTACAAAAATCACGGACGGC 60.136 52.381 0.00 0.00 0.00 5.68
2636 8359 0.179225 CAAAAATCACGGACGGCGAG 60.179 55.000 16.62 7.10 0.00 5.03
2637 8360 1.908066 AAAAATCACGGACGGCGAGC 61.908 55.000 16.62 4.71 0.00 5.03
2652 8375 4.771127 AGCGCTTCGGTCAAAGAA 57.229 50.000 2.64 0.00 29.31 2.52
2653 8376 3.233355 AGCGCTTCGGTCAAAGAAT 57.767 47.368 2.64 0.00 29.31 2.40
2654 8377 0.798776 AGCGCTTCGGTCAAAGAATG 59.201 50.000 2.64 0.00 29.31 2.67
2655 8378 0.179189 GCGCTTCGGTCAAAGAATGG 60.179 55.000 0.00 0.00 0.00 3.16
2656 8379 1.156736 CGCTTCGGTCAAAGAATGGT 58.843 50.000 0.00 0.00 0.00 3.55
2657 8380 1.135972 CGCTTCGGTCAAAGAATGGTG 60.136 52.381 0.00 0.00 0.00 4.17
2658 8381 1.200020 GCTTCGGTCAAAGAATGGTGG 59.800 52.381 0.00 0.00 0.00 4.61
2659 8382 1.812571 CTTCGGTCAAAGAATGGTGGG 59.187 52.381 0.00 0.00 0.00 4.61
2660 8383 1.060729 TCGGTCAAAGAATGGTGGGA 58.939 50.000 0.00 0.00 0.00 4.37
2661 8384 1.165270 CGGTCAAAGAATGGTGGGAC 58.835 55.000 0.00 0.00 0.00 4.46
2662 8385 1.544537 CGGTCAAAGAATGGTGGGACA 60.545 52.381 0.00 0.00 0.00 4.02
2663 8386 2.162681 GGTCAAAGAATGGTGGGACAG 58.837 52.381 0.00 0.00 41.80 3.51
2672 8395 4.898607 GTGGGACAGCAACCTTCA 57.101 55.556 0.00 0.00 41.80 3.02
2673 8396 2.633860 GTGGGACAGCAACCTTCAG 58.366 57.895 0.00 0.00 41.80 3.02
2674 8397 0.108585 GTGGGACAGCAACCTTCAGA 59.891 55.000 0.00 0.00 41.80 3.27
2675 8398 0.108585 TGGGACAGCAACCTTCAGAC 59.891 55.000 0.00 0.00 0.00 3.51
2676 8399 0.398318 GGGACAGCAACCTTCAGACT 59.602 55.000 0.00 0.00 0.00 3.24
2677 8400 1.609320 GGGACAGCAACCTTCAGACTC 60.609 57.143 0.00 0.00 0.00 3.36
2678 8401 1.423395 GACAGCAACCTTCAGACTCG 58.577 55.000 0.00 0.00 0.00 4.18
2679 8402 0.753262 ACAGCAACCTTCAGACTCGT 59.247 50.000 0.00 0.00 0.00 4.18
2680 8403 1.269831 ACAGCAACCTTCAGACTCGTC 60.270 52.381 0.00 0.00 0.00 4.20
2681 8404 1.000283 CAGCAACCTTCAGACTCGTCT 60.000 52.381 0.00 0.00 41.37 4.18
2682 8405 1.271102 AGCAACCTTCAGACTCGTCTC 59.729 52.381 0.00 0.00 37.98 3.36
2683 8406 1.970447 CAACCTTCAGACTCGTCTCG 58.030 55.000 0.00 0.00 37.98 4.04
2684 8407 0.882474 AACCTTCAGACTCGTCTCGG 59.118 55.000 0.00 1.52 37.98 4.63
2685 8408 1.137825 CCTTCAGACTCGTCTCGGC 59.862 63.158 0.00 0.00 37.98 5.54
2686 8409 1.309499 CCTTCAGACTCGTCTCGGCT 61.309 60.000 0.00 0.00 37.98 5.52
2687 8410 0.098025 CTTCAGACTCGTCTCGGCTC 59.902 60.000 0.00 0.00 37.98 4.70
2688 8411 0.321741 TTCAGACTCGTCTCGGCTCT 60.322 55.000 0.00 0.00 37.98 4.09
2689 8412 0.741574 TCAGACTCGTCTCGGCTCTC 60.742 60.000 0.00 0.00 37.98 3.20
2690 8413 1.450669 AGACTCGTCTCGGCTCTCC 60.451 63.158 0.00 0.00 34.17 3.71
2691 8414 2.438795 ACTCGTCTCGGCTCTCCC 60.439 66.667 0.00 0.00 0.00 4.30
2692 8415 2.438614 CTCGTCTCGGCTCTCCCA 60.439 66.667 0.00 0.00 0.00 4.37
2693 8416 2.035155 TCGTCTCGGCTCTCCCAA 59.965 61.111 0.00 0.00 0.00 4.12
2694 8417 1.595993 CTCGTCTCGGCTCTCCCAAA 61.596 60.000 0.00 0.00 0.00 3.28
2695 8418 1.153745 CGTCTCGGCTCTCCCAAAG 60.154 63.158 0.00 0.00 0.00 2.77
2696 8419 1.448717 GTCTCGGCTCTCCCAAAGC 60.449 63.158 0.00 0.00 39.09 3.51
2702 8425 2.787191 GCTCTCCCAAAGCCTTAGC 58.213 57.895 0.00 0.00 40.32 3.09
2703 8426 0.749818 GCTCTCCCAAAGCCTTAGCC 60.750 60.000 0.00 0.00 41.25 3.93
2704 8427 0.915364 CTCTCCCAAAGCCTTAGCCT 59.085 55.000 0.00 0.00 41.25 4.58
2705 8428 0.912486 TCTCCCAAAGCCTTAGCCTC 59.088 55.000 0.00 0.00 41.25 4.70
2706 8429 0.620556 CTCCCAAAGCCTTAGCCTCA 59.379 55.000 0.00 0.00 41.25 3.86
2707 8430 1.213926 CTCCCAAAGCCTTAGCCTCAT 59.786 52.381 0.00 0.00 41.25 2.90
2708 8431 1.640670 TCCCAAAGCCTTAGCCTCATT 59.359 47.619 0.00 0.00 41.25 2.57
2709 8432 1.753073 CCCAAAGCCTTAGCCTCATTG 59.247 52.381 0.00 0.00 41.25 2.82
2710 8433 2.621407 CCCAAAGCCTTAGCCTCATTGA 60.621 50.000 0.00 0.00 41.25 2.57
2711 8434 3.294214 CCAAAGCCTTAGCCTCATTGAT 58.706 45.455 0.00 0.00 41.25 2.57
2712 8435 3.067742 CCAAAGCCTTAGCCTCATTGATG 59.932 47.826 0.00 0.00 41.25 3.07
2713 8436 3.939740 AAGCCTTAGCCTCATTGATGA 57.060 42.857 0.00 0.00 41.25 2.92
2714 8437 4.450305 AAGCCTTAGCCTCATTGATGAT 57.550 40.909 0.00 0.00 41.25 2.45
2715 8438 3.752665 AGCCTTAGCCTCATTGATGATG 58.247 45.455 0.00 0.00 41.25 3.07
2716 8439 2.228343 GCCTTAGCCTCATTGATGATGC 59.772 50.000 11.73 11.73 45.13 3.91
2731 8454 3.008835 TGATGCTCATCTTTTGGGAGG 57.991 47.619 10.76 0.00 38.60 4.30
2732 8455 2.309755 TGATGCTCATCTTTTGGGAGGT 59.690 45.455 10.76 0.00 38.60 3.85
2733 8456 2.978156 TGCTCATCTTTTGGGAGGTT 57.022 45.000 0.00 0.00 0.00 3.50
2734 8457 3.243359 TGCTCATCTTTTGGGAGGTTT 57.757 42.857 0.00 0.00 0.00 3.27
2735 8458 2.892852 TGCTCATCTTTTGGGAGGTTTG 59.107 45.455 0.00 0.00 0.00 2.93
2736 8459 2.232208 GCTCATCTTTTGGGAGGTTTGG 59.768 50.000 0.00 0.00 0.00 3.28
2737 8460 3.500343 CTCATCTTTTGGGAGGTTTGGT 58.500 45.455 0.00 0.00 0.00 3.67
2738 8461 3.496331 TCATCTTTTGGGAGGTTTGGTC 58.504 45.455 0.00 0.00 0.00 4.02
2739 8462 3.140144 TCATCTTTTGGGAGGTTTGGTCT 59.860 43.478 0.00 0.00 0.00 3.85
2740 8463 2.944129 TCTTTTGGGAGGTTTGGTCTG 58.056 47.619 0.00 0.00 0.00 3.51
2741 8464 2.512056 TCTTTTGGGAGGTTTGGTCTGA 59.488 45.455 0.00 0.00 0.00 3.27
2742 8465 2.656947 TTTGGGAGGTTTGGTCTGAG 57.343 50.000 0.00 0.00 0.00 3.35
2743 8466 1.814429 TTGGGAGGTTTGGTCTGAGA 58.186 50.000 0.00 0.00 0.00 3.27
2744 8467 1.352083 TGGGAGGTTTGGTCTGAGAG 58.648 55.000 0.00 0.00 0.00 3.20
2745 8468 0.615850 GGGAGGTTTGGTCTGAGAGG 59.384 60.000 0.00 0.00 0.00 3.69
2746 8469 1.645710 GGAGGTTTGGTCTGAGAGGA 58.354 55.000 0.00 0.00 0.00 3.71
2747 8470 1.978580 GGAGGTTTGGTCTGAGAGGAA 59.021 52.381 0.00 0.00 0.00 3.36
2748 8471 2.573915 GGAGGTTTGGTCTGAGAGGAAT 59.426 50.000 0.00 0.00 0.00 3.01
2749 8472 3.604582 GAGGTTTGGTCTGAGAGGAATG 58.395 50.000 0.00 0.00 0.00 2.67
2750 8473 2.087646 GGTTTGGTCTGAGAGGAATGC 58.912 52.381 0.00 0.00 0.00 3.56
2751 8474 2.290577 GGTTTGGTCTGAGAGGAATGCT 60.291 50.000 0.00 0.00 0.00 3.79
2752 8475 3.055094 GGTTTGGTCTGAGAGGAATGCTA 60.055 47.826 0.00 0.00 0.00 3.49
2753 8476 4.187694 GTTTGGTCTGAGAGGAATGCTAG 58.812 47.826 0.00 0.00 0.00 3.42
2754 8477 3.388552 TGGTCTGAGAGGAATGCTAGA 57.611 47.619 0.00 0.00 0.00 2.43
2755 8478 3.295093 TGGTCTGAGAGGAATGCTAGAG 58.705 50.000 0.00 0.00 0.00 2.43
2756 8479 3.295973 GGTCTGAGAGGAATGCTAGAGT 58.704 50.000 0.00 0.00 0.00 3.24
2757 8480 3.317993 GGTCTGAGAGGAATGCTAGAGTC 59.682 52.174 0.00 0.00 0.00 3.36
2758 8481 4.207165 GTCTGAGAGGAATGCTAGAGTCT 58.793 47.826 0.00 0.00 0.00 3.24
2759 8482 4.644685 GTCTGAGAGGAATGCTAGAGTCTT 59.355 45.833 0.00 0.00 0.00 3.01
2760 8483 5.127031 GTCTGAGAGGAATGCTAGAGTCTTT 59.873 44.000 0.00 0.00 0.00 2.52
2761 8484 5.359576 TCTGAGAGGAATGCTAGAGTCTTTC 59.640 44.000 0.00 0.00 0.00 2.62
2762 8485 4.097135 TGAGAGGAATGCTAGAGTCTTTCG 59.903 45.833 0.00 0.00 0.00 3.46
2763 8486 3.120041 GAGGAATGCTAGAGTCTTTCGC 58.880 50.000 0.00 0.00 0.00 4.70
2764 8487 2.497675 AGGAATGCTAGAGTCTTTCGCA 59.502 45.455 12.06 12.06 34.83 5.10
2765 8488 3.055819 AGGAATGCTAGAGTCTTTCGCAA 60.056 43.478 13.23 1.50 33.94 4.85
2766 8489 3.062774 GGAATGCTAGAGTCTTTCGCAAC 59.937 47.826 13.23 10.79 33.94 4.17
2767 8490 1.698165 TGCTAGAGTCTTTCGCAACG 58.302 50.000 0.00 0.00 0.00 4.10
2768 8491 1.000607 TGCTAGAGTCTTTCGCAACGT 60.001 47.619 0.00 0.00 0.00 3.99
2769 8492 1.387084 GCTAGAGTCTTTCGCAACGTG 59.613 52.381 0.00 0.00 0.00 4.49
2770 8493 1.986378 CTAGAGTCTTTCGCAACGTGG 59.014 52.381 0.00 0.00 0.00 4.94
2771 8494 1.204312 GAGTCTTTCGCAACGTGGC 59.796 57.895 4.32 4.32 0.00 5.01
2805 8528 6.694877 ATGGTCATCATCAACAAGATCAAG 57.305 37.500 0.00 0.00 33.72 3.02
2806 8529 4.397103 TGGTCATCATCAACAAGATCAAGC 59.603 41.667 0.00 0.00 33.72 4.01
2807 8530 4.397103 GGTCATCATCAACAAGATCAAGCA 59.603 41.667 0.00 0.00 33.72 3.91
2808 8531 5.330295 GTCATCATCAACAAGATCAAGCAC 58.670 41.667 0.00 0.00 33.72 4.40
2809 8532 4.093850 TCATCATCAACAAGATCAAGCACG 59.906 41.667 0.00 0.00 33.72 5.34
2810 8533 3.663025 TCATCAACAAGATCAAGCACGA 58.337 40.909 0.00 0.00 33.72 4.35
2811 8534 3.681417 TCATCAACAAGATCAAGCACGAG 59.319 43.478 0.00 0.00 33.72 4.18
2812 8535 2.416747 TCAACAAGATCAAGCACGAGG 58.583 47.619 0.00 0.00 0.00 4.63
2813 8536 1.135859 CAACAAGATCAAGCACGAGGC 60.136 52.381 0.00 0.00 45.30 4.70
2827 8550 4.643387 AGGCGTCGCTTTGGGCTT 62.643 61.111 18.11 0.00 39.13 4.35
2828 8551 3.670377 GGCGTCGCTTTGGGCTTT 61.670 61.111 18.11 0.00 39.13 3.51
2829 8552 2.429069 GCGTCGCTTTGGGCTTTG 60.429 61.111 10.68 0.00 39.13 2.77
2830 8553 2.255252 CGTCGCTTTGGGCTTTGG 59.745 61.111 0.00 0.00 39.13 3.28
2831 8554 2.049156 GTCGCTTTGGGCTTTGGC 60.049 61.111 0.00 0.00 39.13 4.52
2832 8555 3.669344 TCGCTTTGGGCTTTGGCG 61.669 61.111 0.00 0.00 45.93 5.69
2833 8556 4.722855 CGCTTTGGGCTTTGGCGG 62.723 66.667 0.00 0.00 41.77 6.13
2834 8557 4.377708 GCTTTGGGCTTTGGCGGG 62.378 66.667 0.00 0.00 39.81 6.13
2835 8558 2.917227 CTTTGGGCTTTGGCGGGT 60.917 61.111 0.00 0.00 39.81 5.28
2836 8559 3.225069 CTTTGGGCTTTGGCGGGTG 62.225 63.158 0.00 0.00 39.81 4.61
2849 8572 3.741476 GGGTGCCAAGCGCTTGAG 61.741 66.667 43.49 33.47 42.93 3.02
2850 8573 2.980233 GGTGCCAAGCGCTTGAGT 60.980 61.111 43.49 13.16 42.93 3.41
2851 8574 1.671054 GGTGCCAAGCGCTTGAGTA 60.671 57.895 43.49 30.64 42.93 2.59
2852 8575 1.026718 GGTGCCAAGCGCTTGAGTAT 61.027 55.000 43.49 11.88 42.93 2.12
2853 8576 0.804989 GTGCCAAGCGCTTGAGTATT 59.195 50.000 43.49 11.05 42.93 1.89
2854 8577 0.804364 TGCCAAGCGCTTGAGTATTG 59.196 50.000 43.49 28.76 42.93 1.90
2855 8578 0.804989 GCCAAGCGCTTGAGTATTGT 59.195 50.000 43.49 9.37 42.93 2.71
2856 8579 2.006888 GCCAAGCGCTTGAGTATTGTA 58.993 47.619 43.49 0.00 42.93 2.41
2857 8580 2.418628 GCCAAGCGCTTGAGTATTGTAA 59.581 45.455 43.49 0.00 42.93 2.41
2858 8581 3.065371 GCCAAGCGCTTGAGTATTGTAAT 59.935 43.478 43.49 7.72 42.93 1.89
2859 8582 4.591202 CCAAGCGCTTGAGTATTGTAATG 58.409 43.478 43.49 22.53 42.93 1.90
2860 8583 3.951979 AGCGCTTGAGTATTGTAATGC 57.048 42.857 2.64 0.00 0.00 3.56
2861 8584 2.614057 AGCGCTTGAGTATTGTAATGCC 59.386 45.455 2.64 0.00 0.00 4.40
2862 8585 2.599848 GCGCTTGAGTATTGTAATGCCG 60.600 50.000 0.00 0.00 0.00 5.69
2863 8586 2.599848 CGCTTGAGTATTGTAATGCCGC 60.600 50.000 0.00 0.00 0.00 6.53
2864 8587 2.599848 GCTTGAGTATTGTAATGCCGCG 60.600 50.000 0.00 0.00 0.00 6.46
2865 8588 2.588027 TGAGTATTGTAATGCCGCGA 57.412 45.000 8.23 0.00 0.00 5.87
2866 8589 2.469826 TGAGTATTGTAATGCCGCGAG 58.530 47.619 8.23 0.00 0.00 5.03
2867 8590 2.100087 TGAGTATTGTAATGCCGCGAGA 59.900 45.455 8.23 0.00 0.00 4.04
2868 8591 2.726760 GAGTATTGTAATGCCGCGAGAG 59.273 50.000 8.23 0.00 0.00 3.20
2869 8592 2.100916 AGTATTGTAATGCCGCGAGAGT 59.899 45.455 8.23 0.00 0.00 3.24
2870 8593 2.882927 ATTGTAATGCCGCGAGAGTA 57.117 45.000 8.23 0.00 0.00 2.59
2871 8594 2.658373 TTGTAATGCCGCGAGAGTAA 57.342 45.000 8.23 0.00 0.00 2.24
2872 8595 2.882927 TGTAATGCCGCGAGAGTAAT 57.117 45.000 8.23 0.00 0.00 1.89
2873 8596 3.173668 TGTAATGCCGCGAGAGTAATT 57.826 42.857 8.23 0.39 0.00 1.40
2874 8597 3.527533 TGTAATGCCGCGAGAGTAATTT 58.472 40.909 8.23 0.00 0.00 1.82
2875 8598 3.936453 TGTAATGCCGCGAGAGTAATTTT 59.064 39.130 8.23 0.00 0.00 1.82
2876 8599 3.675467 AATGCCGCGAGAGTAATTTTC 57.325 42.857 8.23 0.00 0.00 2.29
2877 8600 1.365699 TGCCGCGAGAGTAATTTTCC 58.634 50.000 8.23 0.00 0.00 3.13
2878 8601 1.066430 TGCCGCGAGAGTAATTTTCCT 60.066 47.619 8.23 0.00 0.00 3.36
2879 8602 2.007608 GCCGCGAGAGTAATTTTCCTT 58.992 47.619 8.23 0.00 0.00 3.36
2880 8603 2.418976 GCCGCGAGAGTAATTTTCCTTT 59.581 45.455 8.23 0.00 0.00 3.11
2881 8604 3.727970 GCCGCGAGAGTAATTTTCCTTTG 60.728 47.826 8.23 0.00 0.00 2.77
2882 8605 3.435671 CCGCGAGAGTAATTTTCCTTTGT 59.564 43.478 8.23 0.00 0.00 2.83
2883 8606 4.435651 CCGCGAGAGTAATTTTCCTTTGTC 60.436 45.833 8.23 0.00 0.00 3.18
2884 8607 4.151689 CGCGAGAGTAATTTTCCTTTGTCA 59.848 41.667 0.00 0.00 0.00 3.58
2885 8608 5.622378 GCGAGAGTAATTTTCCTTTGTCAG 58.378 41.667 0.00 0.00 0.00 3.51
2886 8609 5.622378 CGAGAGTAATTTTCCTTTGTCAGC 58.378 41.667 0.00 0.00 0.00 4.26
2887 8610 5.390991 CGAGAGTAATTTTCCTTTGTCAGCC 60.391 44.000 0.00 0.00 0.00 4.85
2888 8611 4.455877 AGAGTAATTTTCCTTTGTCAGCCG 59.544 41.667 0.00 0.00 0.00 5.52
2889 8612 2.438868 AATTTTCCTTTGTCAGCCGC 57.561 45.000 0.00 0.00 0.00 6.53
2890 8613 1.620822 ATTTTCCTTTGTCAGCCGCT 58.379 45.000 0.00 0.00 0.00 5.52
2891 8614 1.398692 TTTTCCTTTGTCAGCCGCTT 58.601 45.000 0.00 0.00 0.00 4.68
2892 8615 0.667993 TTTCCTTTGTCAGCCGCTTG 59.332 50.000 0.00 0.00 0.00 4.01
2893 8616 1.795170 TTCCTTTGTCAGCCGCTTGC 61.795 55.000 0.00 0.00 41.71 4.01
2903 8626 3.793144 CCGCTTGCGGCTTCTGTC 61.793 66.667 21.17 0.00 39.13 3.51
2904 8627 2.740055 CGCTTGCGGCTTCTGTCT 60.740 61.111 7.16 0.00 39.13 3.41
2905 8628 1.446099 CGCTTGCGGCTTCTGTCTA 60.446 57.895 7.16 0.00 39.13 2.59
2906 8629 1.014044 CGCTTGCGGCTTCTGTCTAA 61.014 55.000 7.16 0.00 39.13 2.10
2907 8630 1.156736 GCTTGCGGCTTCTGTCTAAA 58.843 50.000 0.00 0.00 38.06 1.85
2908 8631 1.535462 GCTTGCGGCTTCTGTCTAAAA 59.465 47.619 0.00 0.00 38.06 1.52
2909 8632 2.162408 GCTTGCGGCTTCTGTCTAAAAT 59.838 45.455 0.00 0.00 38.06 1.82
2910 8633 3.729163 GCTTGCGGCTTCTGTCTAAAATC 60.729 47.826 0.00 0.00 38.06 2.17
2911 8634 3.334583 TGCGGCTTCTGTCTAAAATCT 57.665 42.857 0.00 0.00 0.00 2.40
2912 8635 3.674997 TGCGGCTTCTGTCTAAAATCTT 58.325 40.909 0.00 0.00 0.00 2.40
2913 8636 3.684788 TGCGGCTTCTGTCTAAAATCTTC 59.315 43.478 0.00 0.00 0.00 2.87
2914 8637 3.935828 GCGGCTTCTGTCTAAAATCTTCT 59.064 43.478 0.00 0.00 0.00 2.85
2915 8638 4.033472 GCGGCTTCTGTCTAAAATCTTCTC 59.967 45.833 0.00 0.00 0.00 2.87
2916 8639 4.568760 CGGCTTCTGTCTAAAATCTTCTCC 59.431 45.833 0.00 0.00 0.00 3.71
2917 8640 4.878971 GGCTTCTGTCTAAAATCTTCTCCC 59.121 45.833 0.00 0.00 0.00 4.30
2918 8641 5.338789 GGCTTCTGTCTAAAATCTTCTCCCT 60.339 44.000 0.00 0.00 0.00 4.20
2919 8642 6.176896 GCTTCTGTCTAAAATCTTCTCCCTT 58.823 40.000 0.00 0.00 0.00 3.95
2920 8643 7.331791 GCTTCTGTCTAAAATCTTCTCCCTTA 58.668 38.462 0.00 0.00 0.00 2.69
2921 8644 7.990314 GCTTCTGTCTAAAATCTTCTCCCTTAT 59.010 37.037 0.00 0.00 0.00 1.73
2922 8645 9.898152 CTTCTGTCTAAAATCTTCTCCCTTATT 57.102 33.333 0.00 0.00 0.00 1.40
2934 8657 8.237811 TCTTCTCCCTTATTTAATGAAATGGC 57.762 34.615 0.00 0.00 35.96 4.40
2935 8658 7.838696 TCTTCTCCCTTATTTAATGAAATGGCA 59.161 33.333 0.00 0.00 35.96 4.92
2936 8659 7.969690 TCTCCCTTATTTAATGAAATGGCAA 57.030 32.000 0.00 0.00 35.96 4.52
2937 8660 8.010733 TCTCCCTTATTTAATGAAATGGCAAG 57.989 34.615 0.00 0.00 35.96 4.01
2938 8661 7.619302 TCTCCCTTATTTAATGAAATGGCAAGT 59.381 33.333 0.00 0.00 35.96 3.16
2939 8662 7.781056 TCCCTTATTTAATGAAATGGCAAGTC 58.219 34.615 0.00 0.00 35.96 3.01
2940 8663 7.619302 TCCCTTATTTAATGAAATGGCAAGTCT 59.381 33.333 0.00 0.00 35.96 3.24
2941 8664 8.260114 CCCTTATTTAATGAAATGGCAAGTCTT 58.740 33.333 0.00 0.00 35.96 3.01
2942 8665 9.657419 CCTTATTTAATGAAATGGCAAGTCTTT 57.343 29.630 0.00 0.00 35.96 2.52
2945 8668 6.783892 TTAATGAAATGGCAAGTCTTTTGC 57.216 33.333 3.39 3.39 44.22 3.68
2952 8675 2.492019 GCAAGTCTTTTGCCTCGTTT 57.508 45.000 0.54 0.00 39.38 3.60
2953 8676 3.619233 GCAAGTCTTTTGCCTCGTTTA 57.381 42.857 0.54 0.00 39.38 2.01
2954 8677 3.959943 GCAAGTCTTTTGCCTCGTTTAA 58.040 40.909 0.54 0.00 39.38 1.52
2955 8678 4.356289 GCAAGTCTTTTGCCTCGTTTAAA 58.644 39.130 0.54 0.00 39.38 1.52
2956 8679 4.801516 GCAAGTCTTTTGCCTCGTTTAAAA 59.198 37.500 0.54 0.00 39.38 1.52
2957 8680 5.051708 GCAAGTCTTTTGCCTCGTTTAAAAG 60.052 40.000 0.54 0.00 40.80 2.27
2958 8681 6.262601 CAAGTCTTTTGCCTCGTTTAAAAGA 58.737 36.000 3.78 3.78 43.94 2.52
2959 8682 6.445357 AGTCTTTTGCCTCGTTTAAAAGAA 57.555 33.333 11.54 0.00 46.10 2.52
2960 8683 6.859017 AGTCTTTTGCCTCGTTTAAAAGAAA 58.141 32.000 11.54 0.00 46.10 2.52
2961 8684 7.317390 AGTCTTTTGCCTCGTTTAAAAGAAAA 58.683 30.769 11.54 1.25 46.10 2.29
2974 8697 9.909043 CGTTTAAAAGAAAAATCACGGAAATTT 57.091 25.926 0.00 0.00 0.00 1.82
3005 8728 8.237267 GCTTCATGTAAAGTTACTAGTGCATTT 58.763 33.333 5.39 6.01 34.77 2.32
3011 8734 4.928661 AGTTACTAGTGCATTTCAAGCG 57.071 40.909 5.39 0.00 33.85 4.68
3014 8737 1.003118 ACTAGTGCATTTCAAGCGGGA 59.997 47.619 0.00 0.00 33.85 5.14
3015 8738 1.398390 CTAGTGCATTTCAAGCGGGAC 59.602 52.381 0.00 0.00 33.85 4.46
3016 8739 0.537143 AGTGCATTTCAAGCGGGACA 60.537 50.000 0.00 0.00 33.85 4.02
3018 8741 0.527113 TGCATTTCAAGCGGGACATG 59.473 50.000 0.00 0.00 33.85 3.21
3019 8742 0.803380 GCATTTCAAGCGGGACATGC 60.803 55.000 13.43 13.43 41.89 4.06
3020 8743 0.527113 CATTTCAAGCGGGACATGCA 59.473 50.000 0.00 0.00 33.85 3.96
3021 8744 1.067706 CATTTCAAGCGGGACATGCAA 60.068 47.619 0.00 0.00 33.85 4.08
3023 8746 0.537143 TTCAAGCGGGACATGCAACT 60.537 50.000 0.00 0.00 33.85 3.16
3024 8747 1.210931 CAAGCGGGACATGCAACTG 59.789 57.895 0.00 0.00 33.85 3.16
3025 8748 2.629656 AAGCGGGACATGCAACTGC 61.630 57.895 7.41 7.41 42.50 4.40
3026 8749 3.058160 GCGGGACATGCAACTGCT 61.058 61.111 2.95 0.00 42.66 4.24
3027 8750 2.629656 GCGGGACATGCAACTGCTT 61.630 57.895 2.95 0.00 42.66 3.91
3028 8751 1.959085 CGGGACATGCAACTGCTTT 59.041 52.632 2.95 0.00 42.66 3.51
3029 8752 0.109597 CGGGACATGCAACTGCTTTC 60.110 55.000 2.95 0.00 42.66 2.62
3030 8753 0.109597 GGGACATGCAACTGCTTTCG 60.110 55.000 2.95 0.00 42.66 3.46
3032 8755 0.593128 GACATGCAACTGCTTTCGGT 59.407 50.000 2.95 0.00 42.66 4.69
3060 8783 0.854218 TGCCCCTAAAACTGACCCAA 59.146 50.000 0.00 0.00 0.00 4.12
3143 8866 1.594310 GGCGTTCCTCTTCTGAGCT 59.406 57.895 0.00 0.00 38.93 4.09
3144 8867 0.459411 GGCGTTCCTCTTCTGAGCTC 60.459 60.000 6.82 6.82 38.93 4.09
3145 8868 0.244994 GCGTTCCTCTTCTGAGCTCA 59.755 55.000 17.19 17.19 38.93 4.26
3146 8869 1.735369 GCGTTCCTCTTCTGAGCTCAG 60.735 57.143 33.73 33.73 45.08 3.35
3147 8870 1.135141 CGTTCCTCTTCTGAGCTCAGG 60.135 57.143 36.92 24.70 43.91 3.86
3148 8871 0.901124 TTCCTCTTCTGAGCTCAGGC 59.099 55.000 36.92 3.29 43.91 4.85
3149 8872 1.141449 CCTCTTCTGAGCTCAGGCG 59.859 63.158 36.92 27.97 43.91 5.52
3150 8873 1.318886 CCTCTTCTGAGCTCAGGCGA 61.319 60.000 36.92 29.93 43.91 5.54
3151 8874 0.179140 CTCTTCTGAGCTCAGGCGAC 60.179 60.000 36.92 1.26 43.91 5.19
3152 8875 1.153667 CTTCTGAGCTCAGGCGACC 60.154 63.158 36.92 0.45 43.91 4.79
3153 8876 1.603236 CTTCTGAGCTCAGGCGACCT 61.603 60.000 36.92 0.00 43.91 3.85
3154 8877 1.599606 TTCTGAGCTCAGGCGACCTC 61.600 60.000 36.92 0.00 43.91 3.85
3155 8878 3.408501 CTGAGCTCAGGCGACCTCG 62.409 68.421 32.30 7.60 44.37 4.63
3165 8888 3.991051 CGACCTCGCTGTGGTGGT 61.991 66.667 6.96 6.54 38.03 4.16
3166 8889 2.357517 GACCTCGCTGTGGTGGTG 60.358 66.667 10.54 0.00 38.03 4.17
3167 8890 3.161450 ACCTCGCTGTGGTGGTGT 61.161 61.111 6.13 0.00 36.30 4.16
3168 8891 2.666190 CCTCGCTGTGGTGGTGTG 60.666 66.667 0.00 0.00 0.00 3.82
3169 8892 3.349006 CTCGCTGTGGTGGTGTGC 61.349 66.667 0.00 0.00 0.00 4.57
3170 8893 4.927782 TCGCTGTGGTGGTGTGCC 62.928 66.667 0.00 0.00 0.00 5.01
3173 8896 3.279116 CTGTGGTGGTGTGCCGTG 61.279 66.667 0.00 0.00 37.67 4.94
3174 8897 3.748660 CTGTGGTGGTGTGCCGTGA 62.749 63.158 0.00 0.00 37.67 4.35
3175 8898 2.281484 GTGGTGGTGTGCCGTGAT 60.281 61.111 0.00 0.00 37.67 3.06
3176 8899 2.281414 TGGTGGTGTGCCGTGATG 60.281 61.111 0.00 0.00 37.67 3.07
3177 8900 3.055719 GGTGGTGTGCCGTGATGG 61.056 66.667 0.00 0.00 42.50 3.51
3186 8909 4.377370 CCGTGATGGCAAGTGACA 57.623 55.556 0.00 0.00 37.54 3.58
3187 8910 2.627791 CCGTGATGGCAAGTGACAA 58.372 52.632 0.00 0.00 36.16 3.18
3188 8911 0.238289 CCGTGATGGCAAGTGACAAC 59.762 55.000 0.00 0.00 36.16 3.32
3189 8912 0.110688 CGTGATGGCAAGTGACAACG 60.111 55.000 0.00 0.00 36.16 4.10
3190 8913 0.944386 GTGATGGCAAGTGACAACGT 59.056 50.000 0.00 0.00 36.16 3.99
3191 8914 0.943673 TGATGGCAAGTGACAACGTG 59.056 50.000 0.00 0.00 36.16 4.49
3192 8915 0.238289 GATGGCAAGTGACAACGTGG 59.762 55.000 0.00 0.00 36.16 4.94
3193 8916 0.465460 ATGGCAAGTGACAACGTGGT 60.465 50.000 0.00 0.00 36.16 4.16
3278 9007 1.604278 GAACCCTCTCTGTGTTTGTGC 59.396 52.381 0.00 0.00 0.00 4.57
3312 9041 1.210478 TCCCAAAGCTGATGCCTCTAC 59.790 52.381 0.00 0.00 40.80 2.59
3401 9134 2.622436 GTTGCGCCTCTGTTTAGATCT 58.378 47.619 4.18 0.00 31.21 2.75
3402 9135 3.733988 CGTTGCGCCTCTGTTTAGATCTA 60.734 47.826 4.18 0.00 31.21 1.98
3443 9181 2.405805 CGCATGATTTGGTCGGCCA 61.406 57.895 3.51 3.51 44.38 5.36
3543 9297 3.084039 TCATCCCTGTGATCAGCAAAAC 58.916 45.455 0.00 0.00 40.09 2.43
3589 9344 9.142515 GCAAATCATGAAAGAATTGTACAATCA 57.857 29.630 21.02 15.26 32.36 2.57
3593 9348 8.620116 TCATGAAAGAATTGTACAATCAGACA 57.380 30.769 21.02 16.42 0.00 3.41
3594 9349 8.506437 TCATGAAAGAATTGTACAATCAGACAC 58.494 33.333 21.02 11.63 0.00 3.67
3595 9350 7.800155 TGAAAGAATTGTACAATCAGACACA 57.200 32.000 21.02 13.71 0.00 3.72
3596 9351 7.639039 TGAAAGAATTGTACAATCAGACACAC 58.361 34.615 21.02 9.03 0.00 3.82
3597 9352 7.498900 TGAAAGAATTGTACAATCAGACACACT 59.501 33.333 21.02 2.51 0.00 3.55
3598 9353 6.791887 AGAATTGTACAATCAGACACACTG 57.208 37.500 21.02 0.00 46.97 3.66
3599 9354 5.702670 AGAATTGTACAATCAGACACACTGG 59.297 40.000 21.02 0.00 45.76 4.00
3600 9355 4.415881 TTGTACAATCAGACACACTGGT 57.584 40.909 3.59 0.00 45.76 4.00
3614 9369 4.819783 TGGTGACAGGCCATTCAC 57.180 55.556 22.65 22.65 41.28 3.18
3615 9370 1.842714 TGGTGACAGGCCATTCACA 59.157 52.632 28.46 16.87 43.40 3.58
3635 9390 9.793252 ATTCACATCATAATTAACTTTGCTGAC 57.207 29.630 0.00 0.00 0.00 3.51
3764 9519 6.777580 CCAATACAAGGGTAGCAATTATTCCT 59.222 38.462 0.00 0.00 31.88 3.36
3925 9682 0.953471 CCGCACAATTCGACTTCCCA 60.953 55.000 0.00 0.00 0.00 4.37
3926 9683 0.443869 CGCACAATTCGACTTCCCAG 59.556 55.000 0.00 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
271 273 1.578583 AACGTGGTAACTCTGCACAC 58.421 50.000 0.00 0.00 37.61 3.82
278 280 6.183360 GCCTTTAGTTCATAACGTGGTAACTC 60.183 42.308 8.55 0.00 36.23 3.01
322 328 3.606595 AGTTCCTAACGAGGCCTTTAC 57.393 47.619 6.77 0.00 43.40 2.01
353 359 7.011857 GCTACTGGTCTATTCCAAATCAAGAAG 59.988 40.741 0.00 0.00 37.01 2.85
417 423 9.905171 TTTTAATAATTTGCCATTTCCTTTTGC 57.095 25.926 0.00 0.00 0.00 3.68
446 452 2.695359 TGCTATTTCTTCACCCGTCAC 58.305 47.619 0.00 0.00 0.00 3.67
449 455 6.827586 TTATTTTGCTATTTCTTCACCCGT 57.172 33.333 0.00 0.00 0.00 5.28
516 646 9.464714 GTTTGAGACTATGTGTGGTACTATATG 57.535 37.037 0.00 0.00 0.00 1.78
518 648 8.818622 AGTTTGAGACTATGTGTGGTACTATA 57.181 34.615 0.00 0.00 36.65 1.31
555 687 5.870978 GCATCATACCTGCAGTTTGATTTTT 59.129 36.000 13.81 0.00 42.43 1.94
557 689 4.439153 CGCATCATACCTGCAGTTTGATTT 60.439 41.667 13.81 0.00 42.43 2.17
558 690 3.065786 CGCATCATACCTGCAGTTTGATT 59.934 43.478 13.81 1.08 42.43 2.57
559 691 2.615447 CGCATCATACCTGCAGTTTGAT 59.385 45.455 13.81 14.08 44.90 2.57
663 801 4.018409 GGGCAAGGGCACTTTAGG 57.982 61.111 0.00 0.00 41.45 2.69
792 3894 9.586150 GCGATTTATTCATACATTGTCTACTTG 57.414 33.333 0.00 0.00 0.00 3.16
820 3922 1.268625 CCAAACTAACCTTGTTCCGCC 59.731 52.381 0.00 0.00 0.00 6.13
822 3924 3.473625 AGACCAAACTAACCTTGTTCCG 58.526 45.455 0.00 0.00 0.00 4.30
966 4071 1.084370 GCTCTGGCGCTATGAACGTT 61.084 55.000 7.64 0.00 0.00 3.99
1155 4273 2.122167 GTCCTCGGAGATGGCGACT 61.122 63.158 6.58 0.00 33.89 4.18
1273 4391 2.407428 CGTAGTCAGGCTGGAGCGA 61.407 63.158 15.73 0.00 43.26 4.93
1280 4398 0.803740 GAAGTCGTCGTAGTCAGGCT 59.196 55.000 0.00 0.00 0.00 4.58
1334 4452 3.394874 CGACGCCTCACACACGTG 61.395 66.667 15.48 15.48 45.08 4.49
1364 4482 1.153628 GCTGTGGCCTACTACGGTG 60.154 63.158 3.32 0.00 0.00 4.94
1365 4483 3.295800 GCTGTGGCCTACTACGGT 58.704 61.111 3.32 0.00 0.00 4.83
1430 4549 2.699954 CTAATCCAAGGTCAACGCACT 58.300 47.619 0.00 0.00 0.00 4.40
1465 4598 2.285368 CACTCCCCTGCCTACCCA 60.285 66.667 0.00 0.00 0.00 4.51
1466 4599 2.040606 TCACTCCCCTGCCTACCC 59.959 66.667 0.00 0.00 0.00 3.69
1469 4602 0.691078 GATGGTCACTCCCCTGCCTA 60.691 60.000 0.00 0.00 34.77 3.93
1470 4603 1.997874 GATGGTCACTCCCCTGCCT 60.998 63.158 0.00 0.00 34.77 4.75
1471 4604 1.566298 AAGATGGTCACTCCCCTGCC 61.566 60.000 0.00 0.00 34.77 4.85
1472 4605 0.107459 GAAGATGGTCACTCCCCTGC 60.107 60.000 0.00 0.00 34.77 4.85
1473 4606 1.577736 AGAAGATGGTCACTCCCCTG 58.422 55.000 0.00 0.00 34.77 4.45
1474 4607 1.912043 CAAGAAGATGGTCACTCCCCT 59.088 52.381 0.00 0.00 34.77 4.79
1475 4608 1.630878 ACAAGAAGATGGTCACTCCCC 59.369 52.381 0.00 0.00 34.77 4.81
1478 4611 5.760253 TCTCAAAACAAGAAGATGGTCACTC 59.240 40.000 0.00 0.00 0.00 3.51
1479 4612 5.684704 TCTCAAAACAAGAAGATGGTCACT 58.315 37.500 0.00 0.00 0.00 3.41
1480 4613 6.377327 TTCTCAAAACAAGAAGATGGTCAC 57.623 37.500 0.00 0.00 0.00 3.67
1481 4614 7.403312 TTTTCTCAAAACAAGAAGATGGTCA 57.597 32.000 0.00 0.00 34.42 4.02
1483 4616 7.141363 CGATTTTCTCAAAACAAGAAGATGGT 58.859 34.615 0.00 0.00 34.42 3.55
1484 4617 7.141363 ACGATTTTCTCAAAACAAGAAGATGG 58.859 34.615 0.00 0.00 34.42 3.51
1485 4618 7.324616 GGACGATTTTCTCAAAACAAGAAGATG 59.675 37.037 0.00 0.00 34.42 2.90
1486 4619 7.013274 TGGACGATTTTCTCAAAACAAGAAGAT 59.987 33.333 0.00 0.00 34.42 2.40
1487 4620 6.317642 TGGACGATTTTCTCAAAACAAGAAGA 59.682 34.615 0.00 0.00 34.42 2.87
1488 4621 6.494842 TGGACGATTTTCTCAAAACAAGAAG 58.505 36.000 0.00 0.00 34.42 2.85
1531 4883 3.619483 TGTGTGTTCTTTGTACCGACAAG 59.381 43.478 0.00 0.00 46.11 3.16
1532 4884 3.597255 TGTGTGTTCTTTGTACCGACAA 58.403 40.909 0.00 0.00 43.94 3.18
1573 4925 7.189087 TGCTAGGTGGTCTATGGATATGAATA 58.811 38.462 0.00 0.00 0.00 1.75
1584 4936 2.736347 ACTCGTTGCTAGGTGGTCTAT 58.264 47.619 0.00 0.00 0.00 1.98
1603 4955 7.923414 AATGACTGGTTAAGAAGGATTGTAC 57.077 36.000 0.00 0.00 0.00 2.90
1683 5036 6.138761 GGTAAAAGAATATCTCAGCAATGCG 58.861 40.000 0.00 0.00 0.00 4.73
2025 5388 1.547675 CCCATTAACCATCCATCCCGG 60.548 57.143 0.00 0.00 0.00 5.73
2034 5397 2.456577 GCCTGTGAACCCATTAACCAT 58.543 47.619 0.00 0.00 0.00 3.55
2112 5475 7.598118 CACTCACTAGATAATCATACCAAGCTG 59.402 40.741 0.00 0.00 0.00 4.24
2114 5477 6.367422 GCACTCACTAGATAATCATACCAAGC 59.633 42.308 0.00 0.00 0.00 4.01
2115 5478 7.436933 TGCACTCACTAGATAATCATACCAAG 58.563 38.462 0.00 0.00 0.00 3.61
2116 5479 7.287696 TCTGCACTCACTAGATAATCATACCAA 59.712 37.037 0.00 0.00 0.00 3.67
2117 5480 6.777580 TCTGCACTCACTAGATAATCATACCA 59.222 38.462 0.00 0.00 0.00 3.25
2118 5481 7.220741 TCTGCACTCACTAGATAATCATACC 57.779 40.000 0.00 0.00 0.00 2.73
2119 5482 9.703892 AATTCTGCACTCACTAGATAATCATAC 57.296 33.333 0.00 0.00 0.00 2.39
2122 5485 9.755804 CTTAATTCTGCACTCACTAGATAATCA 57.244 33.333 0.00 0.00 0.00 2.57
2123 5486 8.707839 GCTTAATTCTGCACTCACTAGATAATC 58.292 37.037 0.00 0.00 0.00 1.75
2124 5487 7.659390 GGCTTAATTCTGCACTCACTAGATAAT 59.341 37.037 0.00 0.00 0.00 1.28
2125 5488 6.986817 GGCTTAATTCTGCACTCACTAGATAA 59.013 38.462 0.00 0.00 0.00 1.75
2126 5489 6.098266 TGGCTTAATTCTGCACTCACTAGATA 59.902 38.462 0.00 0.00 0.00 1.98
2127 5490 5.104776 TGGCTTAATTCTGCACTCACTAGAT 60.105 40.000 0.00 0.00 0.00 1.98
2128 5491 4.222810 TGGCTTAATTCTGCACTCACTAGA 59.777 41.667 0.00 0.00 0.00 2.43
2129 5492 4.507710 TGGCTTAATTCTGCACTCACTAG 58.492 43.478 5.21 0.00 0.00 2.57
2130 5493 4.551702 TGGCTTAATTCTGCACTCACTA 57.448 40.909 5.21 0.00 0.00 2.74
2131 5494 3.423539 TGGCTTAATTCTGCACTCACT 57.576 42.857 5.21 0.00 0.00 3.41
2132 5495 3.733077 GCATGGCTTAATTCTGCACTCAC 60.733 47.826 0.00 0.00 33.13 3.51
2133 5496 2.424601 GCATGGCTTAATTCTGCACTCA 59.575 45.455 0.00 0.00 33.13 3.41
2218 5603 6.480524 TTTCGGACTGACAATATGTTTCAG 57.519 37.500 10.57 10.57 31.03 3.02
2219 5604 6.878923 AGATTTCGGACTGACAATATGTTTCA 59.121 34.615 0.00 0.00 0.00 2.69
2290 5676 3.533547 TCTTGACTCCCGTTTCGAAAAA 58.466 40.909 13.10 0.00 0.00 1.94
2291 5677 3.182341 TCTTGACTCCCGTTTCGAAAA 57.818 42.857 13.10 0.00 0.00 2.29
2292 5678 2.894763 TCTTGACTCCCGTTTCGAAA 57.105 45.000 6.47 6.47 0.00 3.46
2293 5679 2.894763 TTCTTGACTCCCGTTTCGAA 57.105 45.000 0.00 0.00 0.00 3.71
2294 5680 3.396260 AATTCTTGACTCCCGTTTCGA 57.604 42.857 0.00 0.00 0.00 3.71
2295 5681 4.491676 TCTAATTCTTGACTCCCGTTTCG 58.508 43.478 0.00 0.00 0.00 3.46
2296 5682 5.932883 ACTTCTAATTCTTGACTCCCGTTTC 59.067 40.000 0.00 0.00 0.00 2.78
2297 5683 5.866207 ACTTCTAATTCTTGACTCCCGTTT 58.134 37.500 0.00 0.00 0.00 3.60
2298 5684 5.485209 ACTTCTAATTCTTGACTCCCGTT 57.515 39.130 0.00 0.00 0.00 4.44
2299 5685 5.485209 AACTTCTAATTCTTGACTCCCGT 57.515 39.130 0.00 0.00 0.00 5.28
2300 5686 8.414778 AGTATAACTTCTAATTCTTGACTCCCG 58.585 37.037 0.00 0.00 0.00 5.14
2328 5714 6.356556 TCAATCGAACAGACATAATTCCCAT 58.643 36.000 0.00 0.00 0.00 4.00
2405 5799 5.422012 TGGAGCTTGTCTACATGTTCATAGA 59.578 40.000 2.30 0.00 34.50 1.98
2406 5800 5.664457 TGGAGCTTGTCTACATGTTCATAG 58.336 41.667 2.30 0.00 34.50 2.23
2415 5811 3.067320 CAGATCGATGGAGCTTGTCTACA 59.933 47.826 0.54 0.00 36.62 2.74
2416 5812 3.067461 ACAGATCGATGGAGCTTGTCTAC 59.933 47.826 0.54 0.00 36.62 2.59
2418 5814 2.106566 ACAGATCGATGGAGCTTGTCT 58.893 47.619 0.54 0.00 36.62 3.41
2421 5817 3.067320 TGTCTACAGATCGATGGAGCTTG 59.933 47.826 0.54 0.00 36.62 4.01
2422 5818 3.291584 TGTCTACAGATCGATGGAGCTT 58.708 45.455 0.54 0.00 36.62 3.74
2423 5819 2.937519 TGTCTACAGATCGATGGAGCT 58.062 47.619 0.54 0.00 40.15 4.09
2468 5900 2.034879 GTCCGACACATGCACCCAG 61.035 63.158 0.00 0.00 0.00 4.45
2470 5902 3.118454 CGTCCGACACATGCACCC 61.118 66.667 0.00 0.00 0.00 4.61
2495 5928 5.856126 TTGACTAACGATAAAGCAACAGG 57.144 39.130 0.00 0.00 0.00 4.00
2498 5931 6.908284 TGTGTTTTGACTAACGATAAAGCAAC 59.092 34.615 0.00 0.00 0.00 4.17
2527 8244 0.394192 TCACTTGACTGGCCAGTGAG 59.606 55.000 42.40 35.26 42.66 3.51
2528 8245 0.394192 CTCACTTGACTGGCCAGTGA 59.606 55.000 42.40 32.80 42.66 3.41
2574 8291 3.695830 CCTTGTGAAGGGCAAGTAGTA 57.304 47.619 0.00 0.00 45.27 1.82
2632 8355 3.354499 CTTTGACCGAAGCGCTCGC 62.354 63.158 12.06 5.07 46.71 5.03
2636 8359 0.179189 CCATTCTTTGACCGAAGCGC 60.179 55.000 0.00 0.00 0.00 5.92
2637 8360 1.135972 CACCATTCTTTGACCGAAGCG 60.136 52.381 0.00 0.00 0.00 4.68
2638 8361 1.200020 CCACCATTCTTTGACCGAAGC 59.800 52.381 0.00 0.00 0.00 3.86
2639 8362 1.812571 CCCACCATTCTTTGACCGAAG 59.187 52.381 0.00 0.00 0.00 3.79
2640 8363 1.422024 TCCCACCATTCTTTGACCGAA 59.578 47.619 0.00 0.00 0.00 4.30
2641 8364 1.060729 TCCCACCATTCTTTGACCGA 58.939 50.000 0.00 0.00 0.00 4.69
2642 8365 1.165270 GTCCCACCATTCTTTGACCG 58.835 55.000 0.00 0.00 0.00 4.79
2643 8366 2.162681 CTGTCCCACCATTCTTTGACC 58.837 52.381 0.00 0.00 0.00 4.02
2644 8367 1.541588 GCTGTCCCACCATTCTTTGAC 59.458 52.381 0.00 0.00 0.00 3.18
2645 8368 1.144708 TGCTGTCCCACCATTCTTTGA 59.855 47.619 0.00 0.00 0.00 2.69
2646 8369 1.619654 TGCTGTCCCACCATTCTTTG 58.380 50.000 0.00 0.00 0.00 2.77
2647 8370 1.963515 GTTGCTGTCCCACCATTCTTT 59.036 47.619 0.00 0.00 0.00 2.52
2648 8371 1.620822 GTTGCTGTCCCACCATTCTT 58.379 50.000 0.00 0.00 0.00 2.52
2649 8372 0.251341 GGTTGCTGTCCCACCATTCT 60.251 55.000 0.00 0.00 0.00 2.40
2650 8373 0.251341 AGGTTGCTGTCCCACCATTC 60.251 55.000 0.00 0.00 0.00 2.67
2651 8374 0.188342 AAGGTTGCTGTCCCACCATT 59.812 50.000 0.00 0.00 0.00 3.16
2652 8375 0.251341 GAAGGTTGCTGTCCCACCAT 60.251 55.000 0.00 0.00 0.00 3.55
2653 8376 1.150536 GAAGGTTGCTGTCCCACCA 59.849 57.895 0.00 0.00 0.00 4.17
2654 8377 0.890996 CTGAAGGTTGCTGTCCCACC 60.891 60.000 0.00 0.00 0.00 4.61
2655 8378 0.108585 TCTGAAGGTTGCTGTCCCAC 59.891 55.000 0.00 0.00 0.00 4.61
2656 8379 0.108585 GTCTGAAGGTTGCTGTCCCA 59.891 55.000 0.00 0.00 0.00 4.37
2657 8380 0.398318 AGTCTGAAGGTTGCTGTCCC 59.602 55.000 0.00 0.00 0.00 4.46
2658 8381 1.802069 GAGTCTGAAGGTTGCTGTCC 58.198 55.000 0.00 0.00 0.00 4.02
2659 8382 1.269831 ACGAGTCTGAAGGTTGCTGTC 60.270 52.381 0.00 0.00 0.00 3.51
2660 8383 0.753262 ACGAGTCTGAAGGTTGCTGT 59.247 50.000 0.00 0.00 0.00 4.40
2661 8384 1.000283 AGACGAGTCTGAAGGTTGCTG 60.000 52.381 4.78 0.00 38.75 4.41
2662 8385 1.271102 GAGACGAGTCTGAAGGTTGCT 59.729 52.381 10.82 0.00 40.61 3.91
2663 8386 1.704070 GAGACGAGTCTGAAGGTTGC 58.296 55.000 10.82 0.00 40.61 4.17
2664 8387 1.401670 CCGAGACGAGTCTGAAGGTTG 60.402 57.143 10.82 0.00 40.61 3.77
2665 8388 0.882474 CCGAGACGAGTCTGAAGGTT 59.118 55.000 10.82 0.00 40.61 3.50
2666 8389 1.587933 GCCGAGACGAGTCTGAAGGT 61.588 60.000 10.82 0.00 40.61 3.50
2667 8390 1.137825 GCCGAGACGAGTCTGAAGG 59.862 63.158 10.82 11.53 40.61 3.46
2668 8391 0.098025 GAGCCGAGACGAGTCTGAAG 59.902 60.000 10.82 2.24 40.61 3.02
2669 8392 0.321741 AGAGCCGAGACGAGTCTGAA 60.322 55.000 10.82 0.00 40.61 3.02
2670 8393 0.741574 GAGAGCCGAGACGAGTCTGA 60.742 60.000 10.82 0.00 40.61 3.27
2671 8394 1.711060 GGAGAGCCGAGACGAGTCTG 61.711 65.000 10.82 3.51 40.61 3.51
2672 8395 1.450669 GGAGAGCCGAGACGAGTCT 60.451 63.158 5.31 5.31 43.78 3.24
2673 8396 2.474612 GGGAGAGCCGAGACGAGTC 61.475 68.421 0.00 0.00 33.83 3.36
2674 8397 2.438795 GGGAGAGCCGAGACGAGT 60.439 66.667 0.00 0.00 33.83 4.18
2675 8398 1.595993 TTTGGGAGAGCCGAGACGAG 61.596 60.000 0.00 0.00 33.83 4.18
2676 8399 1.595993 CTTTGGGAGAGCCGAGACGA 61.596 60.000 0.00 0.00 33.83 4.20
2677 8400 1.153745 CTTTGGGAGAGCCGAGACG 60.154 63.158 0.00 0.00 33.83 4.18
2678 8401 1.448717 GCTTTGGGAGAGCCGAGAC 60.449 63.158 0.00 0.00 34.06 3.36
2679 8402 2.982130 GCTTTGGGAGAGCCGAGA 59.018 61.111 0.00 0.00 34.06 4.04
2684 8407 0.749818 GGCTAAGGCTTTGGGAGAGC 60.750 60.000 4.45 7.00 39.41 4.09
2685 8408 0.915364 AGGCTAAGGCTTTGGGAGAG 59.085 55.000 4.45 0.00 33.67 3.20
2686 8409 0.912486 GAGGCTAAGGCTTTGGGAGA 59.088 55.000 4.45 0.00 38.98 3.71
2687 8410 0.620556 TGAGGCTAAGGCTTTGGGAG 59.379 55.000 4.45 0.00 38.98 4.30
2688 8411 1.298953 ATGAGGCTAAGGCTTTGGGA 58.701 50.000 4.45 0.00 38.98 4.37
2689 8412 1.753073 CAATGAGGCTAAGGCTTTGGG 59.247 52.381 4.45 0.00 38.98 4.12
2690 8413 2.726821 TCAATGAGGCTAAGGCTTTGG 58.273 47.619 4.45 0.00 38.98 3.28
2691 8414 3.949754 TCATCAATGAGGCTAAGGCTTTG 59.050 43.478 4.45 4.32 38.98 2.77
2692 8415 4.240881 TCATCAATGAGGCTAAGGCTTT 57.759 40.909 4.45 0.00 38.98 3.51
2693 8416 3.939740 TCATCAATGAGGCTAAGGCTT 57.060 42.857 4.58 4.58 38.98 4.35
2694 8417 3.752665 CATCATCAATGAGGCTAAGGCT 58.247 45.455 0.00 0.00 40.64 4.58
2712 8435 3.010200 ACCTCCCAAAAGATGAGCATC 57.990 47.619 2.27 2.27 38.09 3.91
2713 8436 3.463048 AACCTCCCAAAAGATGAGCAT 57.537 42.857 0.00 0.00 0.00 3.79
2714 8437 2.892852 CAAACCTCCCAAAAGATGAGCA 59.107 45.455 0.00 0.00 0.00 4.26
2715 8438 2.232208 CCAAACCTCCCAAAAGATGAGC 59.768 50.000 0.00 0.00 0.00 4.26
2716 8439 3.500343 ACCAAACCTCCCAAAAGATGAG 58.500 45.455 0.00 0.00 0.00 2.90
2717 8440 3.140144 AGACCAAACCTCCCAAAAGATGA 59.860 43.478 0.00 0.00 0.00 2.92
2718 8441 3.256631 CAGACCAAACCTCCCAAAAGATG 59.743 47.826 0.00 0.00 0.00 2.90
2719 8442 3.140144 TCAGACCAAACCTCCCAAAAGAT 59.860 43.478 0.00 0.00 0.00 2.40
2720 8443 2.512056 TCAGACCAAACCTCCCAAAAGA 59.488 45.455 0.00 0.00 0.00 2.52
2721 8444 2.887152 CTCAGACCAAACCTCCCAAAAG 59.113 50.000 0.00 0.00 0.00 2.27
2722 8445 2.512056 TCTCAGACCAAACCTCCCAAAA 59.488 45.455 0.00 0.00 0.00 2.44
2723 8446 2.106511 CTCTCAGACCAAACCTCCCAAA 59.893 50.000 0.00 0.00 0.00 3.28
2724 8447 1.699634 CTCTCAGACCAAACCTCCCAA 59.300 52.381 0.00 0.00 0.00 4.12
2725 8448 1.352083 CTCTCAGACCAAACCTCCCA 58.648 55.000 0.00 0.00 0.00 4.37
2726 8449 0.615850 CCTCTCAGACCAAACCTCCC 59.384 60.000 0.00 0.00 0.00 4.30
2727 8450 1.645710 TCCTCTCAGACCAAACCTCC 58.354 55.000 0.00 0.00 0.00 4.30
2728 8451 3.604582 CATTCCTCTCAGACCAAACCTC 58.395 50.000 0.00 0.00 0.00 3.85
2729 8452 2.290577 GCATTCCTCTCAGACCAAACCT 60.291 50.000 0.00 0.00 0.00 3.50
2730 8453 2.087646 GCATTCCTCTCAGACCAAACC 58.912 52.381 0.00 0.00 0.00 3.27
2731 8454 3.064900 AGCATTCCTCTCAGACCAAAC 57.935 47.619 0.00 0.00 0.00 2.93
2732 8455 4.096681 TCTAGCATTCCTCTCAGACCAAA 58.903 43.478 0.00 0.00 0.00 3.28
2733 8456 3.703556 CTCTAGCATTCCTCTCAGACCAA 59.296 47.826 0.00 0.00 0.00 3.67
2734 8457 3.295093 CTCTAGCATTCCTCTCAGACCA 58.705 50.000 0.00 0.00 0.00 4.02
2735 8458 3.295973 ACTCTAGCATTCCTCTCAGACC 58.704 50.000 0.00 0.00 0.00 3.85
2736 8459 4.207165 AGACTCTAGCATTCCTCTCAGAC 58.793 47.826 0.00 0.00 0.00 3.51
2737 8460 4.518278 AGACTCTAGCATTCCTCTCAGA 57.482 45.455 0.00 0.00 0.00 3.27
2738 8461 5.591099 GAAAGACTCTAGCATTCCTCTCAG 58.409 45.833 0.00 0.00 0.00 3.35
2739 8462 4.097135 CGAAAGACTCTAGCATTCCTCTCA 59.903 45.833 0.00 0.00 0.00 3.27
2740 8463 4.606961 CGAAAGACTCTAGCATTCCTCTC 58.393 47.826 0.00 0.00 0.00 3.20
2741 8464 3.181480 GCGAAAGACTCTAGCATTCCTCT 60.181 47.826 0.00 0.00 0.00 3.69
2742 8465 3.120041 GCGAAAGACTCTAGCATTCCTC 58.880 50.000 0.00 0.00 0.00 3.71
2743 8466 2.497675 TGCGAAAGACTCTAGCATTCCT 59.502 45.455 0.00 0.00 32.43 3.36
2744 8467 2.893637 TGCGAAAGACTCTAGCATTCC 58.106 47.619 0.00 0.00 32.43 3.01
2745 8468 3.241804 CGTTGCGAAAGACTCTAGCATTC 60.242 47.826 5.08 0.00 37.68 2.67
2746 8469 2.668457 CGTTGCGAAAGACTCTAGCATT 59.332 45.455 5.08 0.00 37.68 3.56
2747 8470 2.263077 CGTTGCGAAAGACTCTAGCAT 58.737 47.619 5.08 0.00 37.68 3.79
2748 8471 1.000607 ACGTTGCGAAAGACTCTAGCA 60.001 47.619 0.00 1.07 35.90 3.49
2749 8472 1.387084 CACGTTGCGAAAGACTCTAGC 59.613 52.381 0.00 0.00 0.00 3.42
2750 8473 1.986378 CCACGTTGCGAAAGACTCTAG 59.014 52.381 0.00 0.00 0.00 2.43
2751 8474 1.933500 GCCACGTTGCGAAAGACTCTA 60.934 52.381 0.00 0.00 0.00 2.43
2752 8475 1.222115 GCCACGTTGCGAAAGACTCT 61.222 55.000 0.00 0.00 0.00 3.24
2753 8476 1.204312 GCCACGTTGCGAAAGACTC 59.796 57.895 0.00 0.00 0.00 3.36
2754 8477 3.330275 GCCACGTTGCGAAAGACT 58.670 55.556 0.00 0.00 0.00 3.24
2782 8505 5.067413 GCTTGATCTTGTTGATGATGACCAT 59.933 40.000 0.00 0.00 38.43 3.55
2783 8506 4.397103 GCTTGATCTTGTTGATGATGACCA 59.603 41.667 0.00 0.00 35.14 4.02
2784 8507 4.397103 TGCTTGATCTTGTTGATGATGACC 59.603 41.667 0.00 0.00 35.14 4.02
2785 8508 5.330295 GTGCTTGATCTTGTTGATGATGAC 58.670 41.667 0.00 0.00 35.14 3.06
2786 8509 4.093850 CGTGCTTGATCTTGTTGATGATGA 59.906 41.667 0.00 0.00 35.14 2.92
2787 8510 4.093850 TCGTGCTTGATCTTGTTGATGATG 59.906 41.667 0.00 0.00 35.14 3.07
2788 8511 4.256110 TCGTGCTTGATCTTGTTGATGAT 58.744 39.130 0.00 0.00 35.14 2.45
2789 8512 3.663025 TCGTGCTTGATCTTGTTGATGA 58.337 40.909 0.00 0.00 35.14 2.92
2790 8513 3.181513 CCTCGTGCTTGATCTTGTTGATG 60.182 47.826 0.00 0.00 35.14 3.07
2791 8514 3.005554 CCTCGTGCTTGATCTTGTTGAT 58.994 45.455 0.00 0.00 38.27 2.57
2792 8515 2.416747 CCTCGTGCTTGATCTTGTTGA 58.583 47.619 0.00 0.00 0.00 3.18
2793 8516 1.135859 GCCTCGTGCTTGATCTTGTTG 60.136 52.381 0.00 0.00 36.87 3.33
2794 8517 1.160137 GCCTCGTGCTTGATCTTGTT 58.840 50.000 0.00 0.00 36.87 2.83
2795 8518 1.016130 CGCCTCGTGCTTGATCTTGT 61.016 55.000 0.00 0.00 38.05 3.16
2796 8519 1.016130 ACGCCTCGTGCTTGATCTTG 61.016 55.000 0.00 0.00 39.18 3.02
2797 8520 0.737715 GACGCCTCGTGCTTGATCTT 60.738 55.000 0.00 0.00 41.37 2.40
2798 8521 1.153745 GACGCCTCGTGCTTGATCT 60.154 57.895 0.00 0.00 41.37 2.75
2799 8522 2.508891 CGACGCCTCGTGCTTGATC 61.509 63.158 0.00 0.00 41.37 2.92
2800 8523 2.507102 CGACGCCTCGTGCTTGAT 60.507 61.111 0.00 0.00 41.37 2.57
2803 8526 4.664677 AAGCGACGCCTCGTGCTT 62.665 61.111 17.79 16.83 43.36 3.91
2804 8527 4.664677 AAAGCGACGCCTCGTGCT 62.665 61.111 17.79 3.82 41.37 4.40
2805 8528 4.430423 CAAAGCGACGCCTCGTGC 62.430 66.667 17.79 1.55 41.37 5.34
2806 8529 3.777925 CCAAAGCGACGCCTCGTG 61.778 66.667 17.79 9.30 41.37 4.35
2817 8540 4.377708 CCCGCCAAAGCCCAAAGC 62.378 66.667 0.00 0.00 44.25 3.51
2818 8541 2.917227 ACCCGCCAAAGCCCAAAG 60.917 61.111 0.00 0.00 34.57 2.77
2819 8542 3.230245 CACCCGCCAAAGCCCAAA 61.230 61.111 0.00 0.00 34.57 3.28
2836 8559 0.804989 ACAATACTCAAGCGCTTGGC 59.195 50.000 41.00 0.00 40.78 4.52
2837 8560 4.591202 CATTACAATACTCAAGCGCTTGG 58.409 43.478 41.00 33.27 40.78 3.61
2838 8561 4.031028 GCATTACAATACTCAAGCGCTTG 58.969 43.478 38.25 38.25 41.71 4.01
2839 8562 3.065371 GGCATTACAATACTCAAGCGCTT 59.935 43.478 18.98 18.98 0.00 4.68
2840 8563 2.614057 GGCATTACAATACTCAAGCGCT 59.386 45.455 2.64 2.64 0.00 5.92
2841 8564 2.599848 CGGCATTACAATACTCAAGCGC 60.600 50.000 0.00 0.00 0.00 5.92
2842 8565 2.599848 GCGGCATTACAATACTCAAGCG 60.600 50.000 0.00 0.00 0.00 4.68
2843 8566 2.599848 CGCGGCATTACAATACTCAAGC 60.600 50.000 0.00 0.00 0.00 4.01
2844 8567 2.863740 TCGCGGCATTACAATACTCAAG 59.136 45.455 6.13 0.00 0.00 3.02
2845 8568 2.863740 CTCGCGGCATTACAATACTCAA 59.136 45.455 6.13 0.00 0.00 3.02
2846 8569 2.100087 TCTCGCGGCATTACAATACTCA 59.900 45.455 6.13 0.00 0.00 3.41
2847 8570 2.726760 CTCTCGCGGCATTACAATACTC 59.273 50.000 6.13 0.00 0.00 2.59
2848 8571 2.100916 ACTCTCGCGGCATTACAATACT 59.899 45.455 6.13 0.00 0.00 2.12
2849 8572 2.470821 ACTCTCGCGGCATTACAATAC 58.529 47.619 6.13 0.00 0.00 1.89
2850 8573 2.882927 ACTCTCGCGGCATTACAATA 57.117 45.000 6.13 0.00 0.00 1.90
2851 8574 2.882927 TACTCTCGCGGCATTACAAT 57.117 45.000 6.13 0.00 0.00 2.71
2852 8575 2.658373 TTACTCTCGCGGCATTACAA 57.342 45.000 6.13 0.00 0.00 2.41
2853 8576 2.882927 ATTACTCTCGCGGCATTACA 57.117 45.000 6.13 0.00 0.00 2.41
2854 8577 4.515432 GAAAATTACTCTCGCGGCATTAC 58.485 43.478 6.13 0.00 0.00 1.89
2855 8578 3.558418 GGAAAATTACTCTCGCGGCATTA 59.442 43.478 6.13 0.00 0.00 1.90
2856 8579 2.354821 GGAAAATTACTCTCGCGGCATT 59.645 45.455 6.13 0.00 0.00 3.56
2857 8580 1.940613 GGAAAATTACTCTCGCGGCAT 59.059 47.619 6.13 0.00 0.00 4.40
2858 8581 1.066430 AGGAAAATTACTCTCGCGGCA 60.066 47.619 6.13 0.00 0.00 5.69
2859 8582 1.653151 AGGAAAATTACTCTCGCGGC 58.347 50.000 6.13 0.00 0.00 6.53
2860 8583 3.435671 ACAAAGGAAAATTACTCTCGCGG 59.564 43.478 6.13 0.00 0.00 6.46
2861 8584 4.151689 TGACAAAGGAAAATTACTCTCGCG 59.848 41.667 0.00 0.00 0.00 5.87
2862 8585 5.607119 TGACAAAGGAAAATTACTCTCGC 57.393 39.130 0.00 0.00 0.00 5.03
2863 8586 5.390991 GGCTGACAAAGGAAAATTACTCTCG 60.391 44.000 0.00 0.00 0.00 4.04
2864 8587 5.390991 CGGCTGACAAAGGAAAATTACTCTC 60.391 44.000 0.00 0.00 0.00 3.20
2865 8588 4.455877 CGGCTGACAAAGGAAAATTACTCT 59.544 41.667 0.00 0.00 0.00 3.24
2866 8589 4.723248 CGGCTGACAAAGGAAAATTACTC 58.277 43.478 0.00 0.00 0.00 2.59
2867 8590 3.057526 GCGGCTGACAAAGGAAAATTACT 60.058 43.478 0.00 0.00 0.00 2.24
2868 8591 3.057526 AGCGGCTGACAAAGGAAAATTAC 60.058 43.478 0.00 0.00 0.00 1.89
2869 8592 3.153919 AGCGGCTGACAAAGGAAAATTA 58.846 40.909 0.00 0.00 0.00 1.40
2870 8593 1.963515 AGCGGCTGACAAAGGAAAATT 59.036 42.857 0.00 0.00 0.00 1.82
2871 8594 1.620822 AGCGGCTGACAAAGGAAAAT 58.379 45.000 0.00 0.00 0.00 1.82
2872 8595 1.066908 CAAGCGGCTGACAAAGGAAAA 59.933 47.619 1.81 0.00 0.00 2.29
2873 8596 0.667993 CAAGCGGCTGACAAAGGAAA 59.332 50.000 1.81 0.00 0.00 3.13
2874 8597 1.795170 GCAAGCGGCTGACAAAGGAA 61.795 55.000 1.81 0.00 40.25 3.36
2875 8598 2.260869 GCAAGCGGCTGACAAAGGA 61.261 57.895 1.81 0.00 40.25 3.36
2876 8599 2.256461 GCAAGCGGCTGACAAAGG 59.744 61.111 1.81 0.00 40.25 3.11
2877 8600 2.127118 CGCAAGCGGCTGACAAAG 60.127 61.111 1.81 0.00 41.67 2.77
2888 8611 1.156736 TTTAGACAGAAGCCGCAAGC 58.843 50.000 0.00 0.00 44.25 4.01
2889 8612 3.686726 AGATTTTAGACAGAAGCCGCAAG 59.313 43.478 0.00 0.00 0.00 4.01
2890 8613 3.674997 AGATTTTAGACAGAAGCCGCAA 58.325 40.909 0.00 0.00 0.00 4.85
2891 8614 3.334583 AGATTTTAGACAGAAGCCGCA 57.665 42.857 0.00 0.00 0.00 5.69
2892 8615 3.935828 AGAAGATTTTAGACAGAAGCCGC 59.064 43.478 0.00 0.00 0.00 6.53
2893 8616 4.568760 GGAGAAGATTTTAGACAGAAGCCG 59.431 45.833 0.00 0.00 0.00 5.52
2894 8617 4.878971 GGGAGAAGATTTTAGACAGAAGCC 59.121 45.833 0.00 0.00 0.00 4.35
2895 8618 5.739959 AGGGAGAAGATTTTAGACAGAAGC 58.260 41.667 0.00 0.00 0.00 3.86
2896 8619 9.898152 AATAAGGGAGAAGATTTTAGACAGAAG 57.102 33.333 0.00 0.00 0.00 2.85
2908 8631 8.864087 GCCATTTCATTAAATAAGGGAGAAGAT 58.136 33.333 0.00 0.00 33.45 2.40
2909 8632 7.838696 TGCCATTTCATTAAATAAGGGAGAAGA 59.161 33.333 0.00 0.00 33.45 2.87
2910 8633 8.010733 TGCCATTTCATTAAATAAGGGAGAAG 57.989 34.615 0.00 0.00 33.45 2.85
2911 8634 7.969690 TGCCATTTCATTAAATAAGGGAGAA 57.030 32.000 0.00 0.00 33.45 2.87
2912 8635 7.619302 ACTTGCCATTTCATTAAATAAGGGAGA 59.381 33.333 0.00 0.00 33.45 3.71
2913 8636 7.785033 ACTTGCCATTTCATTAAATAAGGGAG 58.215 34.615 0.00 0.00 33.45 4.30
2914 8637 7.619302 AGACTTGCCATTTCATTAAATAAGGGA 59.381 33.333 0.00 0.00 33.45 4.20
2915 8638 7.785033 AGACTTGCCATTTCATTAAATAAGGG 58.215 34.615 0.00 0.00 33.45 3.95
2916 8639 9.657419 AAAGACTTGCCATTTCATTAAATAAGG 57.343 29.630 0.00 0.00 33.45 2.69
2919 8642 8.934825 GCAAAAGACTTGCCATTTCATTAAATA 58.065 29.630 0.00 0.00 39.38 1.40
2920 8643 7.809665 GCAAAAGACTTGCCATTTCATTAAAT 58.190 30.769 0.00 0.00 39.38 1.40
2921 8644 7.188468 GCAAAAGACTTGCCATTTCATTAAA 57.812 32.000 0.00 0.00 39.38 1.52
2922 8645 6.783892 GCAAAAGACTTGCCATTTCATTAA 57.216 33.333 0.00 0.00 39.38 1.40
2933 8656 2.492019 AAACGAGGCAAAAGACTTGC 57.508 45.000 0.78 0.78 44.22 4.01
2934 8657 6.262601 TCTTTTAAACGAGGCAAAAGACTTG 58.737 36.000 11.87 0.00 41.16 3.16
2935 8658 6.445357 TCTTTTAAACGAGGCAAAAGACTT 57.555 33.333 11.87 0.00 41.16 3.01
2936 8659 6.445357 TTCTTTTAAACGAGGCAAAAGACT 57.555 33.333 14.08 0.00 44.01 3.24
2937 8660 7.514573 TTTTCTTTTAAACGAGGCAAAAGAC 57.485 32.000 14.08 0.00 44.01 3.01
2938 8661 8.710835 ATTTTTCTTTTAAACGAGGCAAAAGA 57.289 26.923 11.87 11.87 43.15 2.52
2939 8662 8.599774 TGATTTTTCTTTTAAACGAGGCAAAAG 58.400 29.630 0.00 0.00 39.51 2.27
2940 8663 8.384365 GTGATTTTTCTTTTAAACGAGGCAAAA 58.616 29.630 0.00 5.67 0.00 2.44
2941 8664 7.253817 CGTGATTTTTCTTTTAAACGAGGCAAA 60.254 33.333 0.00 0.00 31.76 3.68
2942 8665 6.197468 CGTGATTTTTCTTTTAAACGAGGCAA 59.803 34.615 0.00 0.00 31.76 4.52
2943 8666 5.683743 CGTGATTTTTCTTTTAAACGAGGCA 59.316 36.000 0.00 0.00 31.76 4.75
2944 8667 5.116528 CCGTGATTTTTCTTTTAAACGAGGC 59.883 40.000 0.00 0.00 31.76 4.70
2945 8668 6.432107 TCCGTGATTTTTCTTTTAAACGAGG 58.568 36.000 0.00 0.00 31.76 4.63
2946 8669 7.901874 TTCCGTGATTTTTCTTTTAAACGAG 57.098 32.000 0.00 0.00 31.76 4.18
2947 8670 8.859517 ATTTCCGTGATTTTTCTTTTAAACGA 57.140 26.923 0.00 0.00 31.76 3.85
2948 8671 9.909043 AAATTTCCGTGATTTTTCTTTTAAACG 57.091 25.926 0.00 0.00 0.00 3.60
2954 8677 8.547894 GCAGTTAAATTTCCGTGATTTTTCTTT 58.452 29.630 0.00 0.00 0.00 2.52
2955 8678 7.926018 AGCAGTTAAATTTCCGTGATTTTTCTT 59.074 29.630 0.00 0.00 0.00 2.52
2956 8679 7.433680 AGCAGTTAAATTTCCGTGATTTTTCT 58.566 30.769 0.00 0.00 0.00 2.52
2957 8680 7.637709 AGCAGTTAAATTTCCGTGATTTTTC 57.362 32.000 0.00 0.00 0.00 2.29
2958 8681 7.708752 TGAAGCAGTTAAATTTCCGTGATTTTT 59.291 29.630 0.00 0.00 0.00 1.94
2959 8682 7.206687 TGAAGCAGTTAAATTTCCGTGATTTT 58.793 30.769 0.00 0.00 0.00 1.82
2960 8683 6.744112 TGAAGCAGTTAAATTTCCGTGATTT 58.256 32.000 0.00 0.00 0.00 2.17
2961 8684 6.325919 TGAAGCAGTTAAATTTCCGTGATT 57.674 33.333 0.00 0.00 0.00 2.57
2974 8697 9.419297 CACTAGTAACTTTACATGAAGCAGTTA 57.581 33.333 0.00 3.79 36.12 2.24
2977 8700 6.368791 TGCACTAGTAACTTTACATGAAGCAG 59.631 38.462 0.00 0.00 36.12 4.24
2998 8721 0.527565 ATGTCCCGCTTGAAATGCAC 59.472 50.000 0.00 0.00 36.70 4.57
3005 8728 1.073025 AGTTGCATGTCCCGCTTGA 59.927 52.632 0.00 0.00 0.00 3.02
3011 8734 0.109597 CGAAAGCAGTTGCATGTCCC 60.110 55.000 6.90 0.00 45.16 4.46
3014 8737 1.890876 TACCGAAAGCAGTTGCATGT 58.109 45.000 6.90 0.00 45.16 3.21
3015 8738 3.429085 GAATACCGAAAGCAGTTGCATG 58.571 45.455 6.90 0.00 45.16 4.06
3016 8739 2.423538 GGAATACCGAAAGCAGTTGCAT 59.576 45.455 6.90 0.00 45.16 3.96
3018 8741 2.084546 AGGAATACCGAAAGCAGTTGC 58.915 47.619 0.00 0.00 41.83 4.17
3019 8742 3.502211 ACAAGGAATACCGAAAGCAGTTG 59.498 43.478 0.00 0.00 41.83 3.16
3020 8743 3.502211 CACAAGGAATACCGAAAGCAGTT 59.498 43.478 0.00 0.00 41.83 3.16
3021 8744 3.074412 CACAAGGAATACCGAAAGCAGT 58.926 45.455 0.00 0.00 41.83 4.40
3023 8746 1.810151 GCACAAGGAATACCGAAAGCA 59.190 47.619 0.00 0.00 41.83 3.91
3024 8747 1.132453 GGCACAAGGAATACCGAAAGC 59.868 52.381 0.00 0.00 41.83 3.51
3025 8748 1.743394 GGGCACAAGGAATACCGAAAG 59.257 52.381 0.00 0.00 41.83 2.62
3026 8749 1.614850 GGGGCACAAGGAATACCGAAA 60.615 52.381 0.00 0.00 41.83 3.46
3027 8750 0.034863 GGGGCACAAGGAATACCGAA 60.035 55.000 0.00 0.00 41.83 4.30
3028 8751 0.912487 AGGGGCACAAGGAATACCGA 60.912 55.000 0.00 0.00 41.83 4.69
3029 8752 0.834612 TAGGGGCACAAGGAATACCG 59.165 55.000 0.00 0.00 41.83 4.02
3030 8753 3.375647 TTTAGGGGCACAAGGAATACC 57.624 47.619 0.00 0.00 0.00 2.73
3032 8755 4.043561 TCAGTTTTAGGGGCACAAGGAATA 59.956 41.667 0.00 0.00 0.00 1.75
3060 8783 5.686124 GCCTGCAGGTAGAGAGACAATAATT 60.686 44.000 32.81 0.00 37.57 1.40
3148 8871 3.991051 ACCACCACAGCGAGGTCG 61.991 66.667 0.00 0.00 37.23 4.79
3149 8872 2.357517 CACCACCACAGCGAGGTC 60.358 66.667 0.00 0.00 37.23 3.85
3150 8873 3.161450 ACACCACCACAGCGAGGT 61.161 61.111 0.00 0.00 40.85 3.85
3151 8874 2.666190 CACACCACCACAGCGAGG 60.666 66.667 0.00 0.00 0.00 4.63
3152 8875 3.349006 GCACACCACCACAGCGAG 61.349 66.667 0.00 0.00 0.00 5.03
3153 8876 4.927782 GGCACACCACCACAGCGA 62.928 66.667 0.00 0.00 35.26 4.93
3156 8879 3.279116 CACGGCACACCACCACAG 61.279 66.667 0.00 0.00 34.57 3.66
3157 8880 3.113514 ATCACGGCACACCACCACA 62.114 57.895 0.00 0.00 34.57 4.17
3158 8881 2.281484 ATCACGGCACACCACCAC 60.281 61.111 0.00 0.00 34.57 4.16
3159 8882 2.281414 CATCACGGCACACCACCA 60.281 61.111 0.00 0.00 34.57 4.17
3160 8883 3.055719 CCATCACGGCACACCACC 61.056 66.667 0.00 0.00 34.57 4.61
3169 8892 0.238289 GTTGTCACTTGCCATCACGG 59.762 55.000 0.00 0.00 38.11 4.94
3170 8893 0.110688 CGTTGTCACTTGCCATCACG 60.111 55.000 0.00 0.00 0.00 4.35
3171 8894 0.944386 ACGTTGTCACTTGCCATCAC 59.056 50.000 0.00 0.00 0.00 3.06
3172 8895 0.943673 CACGTTGTCACTTGCCATCA 59.056 50.000 0.00 0.00 0.00 3.07
3173 8896 0.238289 CCACGTTGTCACTTGCCATC 59.762 55.000 0.00 0.00 0.00 3.51
3174 8897 0.465460 ACCACGTTGTCACTTGCCAT 60.465 50.000 0.00 0.00 0.00 4.40
3175 8898 1.078072 ACCACGTTGTCACTTGCCA 60.078 52.632 0.00 0.00 0.00 4.92
3176 8899 1.355210 CACCACGTTGTCACTTGCC 59.645 57.895 0.00 0.00 0.00 4.52
3177 8900 1.298339 GCACCACGTTGTCACTTGC 60.298 57.895 0.00 0.00 0.00 4.01
3178 8901 0.304705 GAGCACCACGTTGTCACTTG 59.695 55.000 0.00 0.00 0.00 3.16
3179 8902 0.107897 TGAGCACCACGTTGTCACTT 60.108 50.000 0.00 0.00 0.00 3.16
3180 8903 0.530650 CTGAGCACCACGTTGTCACT 60.531 55.000 0.00 0.00 0.00 3.41
3181 8904 1.498865 CCTGAGCACCACGTTGTCAC 61.499 60.000 0.00 0.00 0.00 3.67
3182 8905 1.227527 CCTGAGCACCACGTTGTCA 60.228 57.895 0.00 0.00 0.00 3.58
3183 8906 2.607892 GCCTGAGCACCACGTTGTC 61.608 63.158 0.00 0.00 39.53 3.18
3184 8907 2.591715 GCCTGAGCACCACGTTGT 60.592 61.111 0.00 0.00 39.53 3.32
3185 8908 3.716006 CGCCTGAGCACCACGTTG 61.716 66.667 0.00 0.00 39.83 4.10
3186 8909 3.923864 TCGCCTGAGCACCACGTT 61.924 61.111 0.00 0.00 39.83 3.99
3187 8910 4.664677 GTCGCCTGAGCACCACGT 62.665 66.667 0.00 0.00 39.83 4.49
3189 8912 3.941657 GAGGTCGCCTGAGCACCAC 62.942 68.421 2.98 0.93 45.10 4.16
3190 8913 3.695606 GAGGTCGCCTGAGCACCA 61.696 66.667 2.98 0.00 45.10 4.17
3191 8914 4.803426 CGAGGTCGCCTGAGCACC 62.803 72.222 2.98 0.00 45.10 5.01
3237 8966 1.145377 GGTCAGACCACCACGTTGT 59.855 57.895 15.43 0.00 38.42 3.32
3307 9036 4.261405 CCAGCACTAGAAGGAATCGTAGAG 60.261 50.000 0.00 0.00 43.63 2.43
3312 9041 1.137872 AGCCAGCACTAGAAGGAATCG 59.862 52.381 0.00 0.00 0.00 3.34
3443 9181 0.759346 AAACTGGCTCTGTCGAACCT 59.241 50.000 0.00 0.00 0.00 3.50
3543 9297 3.507233 TGCTTCTTTATTTGCCCTCTGTG 59.493 43.478 0.00 0.00 0.00 3.66
3589 9344 1.447643 GCCTGTCACCAGTGTGTCT 59.552 57.895 0.00 0.00 43.26 3.41
3590 9345 1.598130 GGCCTGTCACCAGTGTGTC 60.598 63.158 0.00 0.00 43.26 3.67
3591 9346 1.708993 ATGGCCTGTCACCAGTGTGT 61.709 55.000 3.32 0.00 43.26 3.72
3592 9347 0.538057 AATGGCCTGTCACCAGTGTG 60.538 55.000 3.32 0.00 41.46 3.82
3593 9348 0.250901 GAATGGCCTGTCACCAGTGT 60.251 55.000 3.32 0.00 41.46 3.55
3594 9349 0.250858 TGAATGGCCTGTCACCAGTG 60.251 55.000 3.32 0.00 41.46 3.66
3595 9350 0.250901 GTGAATGGCCTGTCACCAGT 60.251 55.000 22.06 0.00 41.46 4.00
3596 9351 0.250858 TGTGAATGGCCTGTCACCAG 60.251 55.000 26.69 0.00 42.89 4.00
3597 9352 0.405198 ATGTGAATGGCCTGTCACCA 59.595 50.000 26.69 18.56 42.89 4.17
3598 9353 1.098050 GATGTGAATGGCCTGTCACC 58.902 55.000 26.69 14.68 42.89 4.02
3599 9354 1.825090 TGATGTGAATGGCCTGTCAC 58.175 50.000 24.46 24.46 43.66 3.67
3600 9355 2.812836 ATGATGTGAATGGCCTGTCA 57.187 45.000 3.32 4.32 0.00 3.58
3601 9356 5.779529 AATTATGATGTGAATGGCCTGTC 57.220 39.130 3.32 1.13 0.00 3.51
3602 9357 6.835488 AGTTAATTATGATGTGAATGGCCTGT 59.165 34.615 3.32 0.00 0.00 4.00
3603 9358 7.281040 AGTTAATTATGATGTGAATGGCCTG 57.719 36.000 3.32 0.00 0.00 4.85
3604 9359 7.902920 AAGTTAATTATGATGTGAATGGCCT 57.097 32.000 3.32 0.00 0.00 5.19
3605 9360 7.042523 GCAAAGTTAATTATGATGTGAATGGCC 60.043 37.037 0.00 0.00 0.00 5.36
3606 9361 7.707893 AGCAAAGTTAATTATGATGTGAATGGC 59.292 33.333 0.00 0.00 0.00 4.40
3607 9362 9.027129 CAGCAAAGTTAATTATGATGTGAATGG 57.973 33.333 0.00 0.00 0.00 3.16
3608 9363 9.791820 TCAGCAAAGTTAATTATGATGTGAATG 57.208 29.630 2.89 0.00 31.52 2.67
3609 9364 9.793252 GTCAGCAAAGTTAATTATGATGTGAAT 57.207 29.630 2.89 0.00 31.52 2.57
3610 9365 7.962373 CGTCAGCAAAGTTAATTATGATGTGAA 59.038 33.333 2.89 0.00 31.52 3.18
3611 9366 7.333174 TCGTCAGCAAAGTTAATTATGATGTGA 59.667 33.333 2.89 1.03 31.52 3.58
3612 9367 7.463544 TCGTCAGCAAAGTTAATTATGATGTG 58.536 34.615 2.89 0.00 31.52 3.21
3613 9368 7.609760 TCGTCAGCAAAGTTAATTATGATGT 57.390 32.000 2.89 0.00 31.52 3.06
3614 9369 8.894409 TTTCGTCAGCAAAGTTAATTATGATG 57.106 30.769 0.00 0.00 0.00 3.07
3615 9370 9.722056 GATTTCGTCAGCAAAGTTAATTATGAT 57.278 29.630 0.00 0.00 0.00 2.45
3764 9519 1.344438 CCCGCCTGTGATATAAGCTGA 59.656 52.381 0.00 0.00 0.00 4.26
3925 9682 2.418368 TGTTCAGTTGTTCCAGCACT 57.582 45.000 0.00 0.00 0.00 4.40
3926 9683 2.223572 CCTTGTTCAGTTGTTCCAGCAC 60.224 50.000 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.