Multiple sequence alignment - TraesCS2B01G235100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G235100 chr2B 100.000 9206 0 0 1 9206 234641217 234632012 0.000000e+00 17001.0
1 TraesCS2B01G235100 chr2B 90.909 66 5 1 101 165 680348830 680348765 4.580000e-13 87.9
2 TraesCS2B01G235100 chr2D 95.918 8722 246 50 302 8961 177865558 177856885 0.000000e+00 14033.0
3 TraesCS2B01G235100 chr2D 90.850 153 13 1 8974 9125 526524969 526525121 4.360000e-48 204.0
4 TraesCS2B01G235100 chr2D 90.323 155 14 1 8972 9125 521863827 521863981 1.570000e-47 202.0
5 TraesCS2B01G235100 chr2A 95.374 6918 233 38 304 7185 192512752 192505886 0.000000e+00 10922.0
6 TraesCS2B01G235100 chr2A 94.127 1805 50 27 7188 8949 192505758 192503967 0.000000e+00 2695.0
7 TraesCS2B01G235100 chr3A 94.167 480 15 7 496 972 589604053 589603584 0.000000e+00 719.0
8 TraesCS2B01G235100 chr3A 94.417 412 12 5 564 972 589603561 589603158 2.820000e-174 623.0
9 TraesCS2B01G235100 chr3A 94.189 413 13 5 502 911 589602851 589602447 3.650000e-173 619.0
10 TraesCS2B01G235100 chr3A 91.322 242 11 4 265 496 589605971 589605730 1.150000e-83 322.0
11 TraesCS2B01G235100 chr3A 90.385 156 11 2 8974 9128 414665058 414665210 1.570000e-47 202.0
12 TraesCS2B01G235100 chr3A 90.385 156 11 2 8974 9128 414733884 414733732 1.570000e-47 202.0
13 TraesCS2B01G235100 chr3A 96.429 56 2 0 44 99 589606016 589605961 9.840000e-15 93.5
14 TraesCS2B01G235100 chr5D 89.020 255 24 4 2603 2854 440489698 440489445 6.940000e-81 313.0
15 TraesCS2B01G235100 chr5D 88.235 170 16 4 8974 9141 108129525 108129358 5.640000e-47 200.0
16 TraesCS2B01G235100 chr6D 88.889 252 24 4 2606 2854 53269925 53269675 3.230000e-79 307.0
17 TraesCS2B01G235100 chr7A 91.613 155 12 1 8974 9127 323448443 323448597 7.240000e-51 213.0
18 TraesCS2B01G235100 chr6A 91.558 154 12 1 8974 9126 5939088 5939241 2.600000e-50 211.0
19 TraesCS2B01G235100 chr6A 87.692 65 8 0 2796 2860 305369801 305369737 9.910000e-10 76.8
20 TraesCS2B01G235100 chr7B 90.850 153 12 2 8974 9125 740989995 740990146 4.360000e-48 204.0
21 TraesCS2B01G235100 chr7B 89.744 156 12 2 8974 9128 148221603 148221755 7.290000e-46 196.0
22 TraesCS2B01G235100 chr7B 94.030 67 3 1 97 162 727386779 727386845 5.880000e-17 100.0
23 TraesCS2B01G235100 chr6B 89.815 108 8 3 162 267 101661611 101661717 1.610000e-27 135.0
24 TraesCS2B01G235100 chr7D 88.542 96 10 1 172 267 99299412 99299318 2.100000e-21 115.0
25 TraesCS2B01G235100 chr7D 94.118 68 3 1 99 165 169350447 169350514 1.640000e-17 102.0
26 TraesCS2B01G235100 chr7D 89.394 66 6 1 101 165 476679020 476679085 2.130000e-11 82.4
27 TraesCS2B01G235100 chr4A 96.825 63 2 0 100 162 70323386 70323448 1.260000e-18 106.0
28 TraesCS2B01G235100 chr4A 95.455 66 2 1 101 165 730696197 730696132 4.550000e-18 104.0
29 TraesCS2B01G235100 chr4A 90.909 66 5 1 101 165 466113192 466113257 4.580000e-13 87.9
30 TraesCS2B01G235100 chr3D 95.385 65 3 0 101 165 277147522 277147458 4.550000e-18 104.0
31 TraesCS2B01G235100 chr5A 92.424 66 4 1 101 165 536286070 536286005 9.840000e-15 93.5
32 TraesCS2B01G235100 chr1B 81.308 107 10 8 156 256 24937046 24937148 2.760000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G235100 chr2B 234632012 234641217 9205 True 17001.0 17001 100.0000 1 9206 1 chr2B.!!$R1 9205
1 TraesCS2B01G235100 chr2D 177856885 177865558 8673 True 14033.0 14033 95.9180 302 8961 1 chr2D.!!$R1 8659
2 TraesCS2B01G235100 chr2A 192503967 192512752 8785 True 6808.5 10922 94.7505 304 8949 2 chr2A.!!$R1 8645
3 TraesCS2B01G235100 chr3A 589602447 589606016 3569 True 475.3 719 94.1048 44 972 5 chr3A.!!$R2 928

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
148 149 0.036294 GAGACTGTGGTAACCCAGCC 60.036 60.000 0.00 0.00 42.94 4.85 F
253 254 0.108186 TATGAGCGCTTGGGTCTGTG 60.108 55.000 13.26 0.00 43.60 3.66 F
256 257 0.320421 GAGCGCTTGGGTCTGTGTTA 60.320 55.000 13.26 0.00 40.05 2.41 F
257 258 0.324943 AGCGCTTGGGTCTGTGTTAT 59.675 50.000 2.64 0.00 0.00 1.89 F
258 259 0.447801 GCGCTTGGGTCTGTGTTATG 59.552 55.000 0.00 0.00 0.00 1.90 F
1584 3711 1.078143 GCACCCTCCATGTCACCTC 60.078 63.158 0.00 0.00 0.00 3.85 F
2853 5057 0.454600 GCTCAATGCAGGTGTCCATG 59.545 55.000 0.00 0.00 42.31 3.66 F
3283 5487 0.251297 TGGATCACAGGGCAGGTTTG 60.251 55.000 0.00 0.00 0.00 2.93 F
4612 7257 0.035725 TCAGCTTCTGTGGATGCCAG 60.036 55.000 0.00 0.00 41.66 4.85 F
4964 7609 0.105224 CTGCTGGGAGCTCAGATCTG 59.895 60.000 17.07 17.07 42.97 2.90 F
5096 7741 0.250513 GGGAGGTGATGTGTGAGGAC 59.749 60.000 0.00 0.00 0.00 3.85 F
6828 9479 0.537143 TGTTGACCAGCGCAGGATTT 60.537 50.000 27.14 2.31 0.00 2.17 F
7803 10614 0.908198 AGCTCATTGAGGGGTGAGTC 59.092 55.000 15.28 0.00 42.91 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1824 3953 0.320771 AGCAGAACGTTACCAGGCAG 60.321 55.000 0.00 0.00 0.00 4.85 R
2188 4320 3.003275 ACAACACGTTACATCCAGCAAAG 59.997 43.478 0.00 0.00 0.00 2.77 R
2241 4373 5.514274 TTGTTTAAAGGCTCCAGAAACTG 57.486 39.130 12.01 0.00 32.47 3.16 R
2304 4436 8.621286 CAAATGTTGAAACCTAACAAGACTACT 58.379 33.333 0.00 0.00 40.95 2.57 R
2483 4687 3.285215 GGGGATGATGCTGCTGCG 61.285 66.667 11.21 0.00 43.34 5.18 R
2977 5181 0.257039 CCCAGTTGAGGAGGGATTGG 59.743 60.000 0.00 0.00 45.80 3.16 R
3667 5871 0.672711 GGTAAGGGTTGAGTCACCGC 60.673 60.000 0.00 0.00 37.76 5.68 R
4881 7526 0.796927 GCTGTAGACTTTGTTCGGGC 59.203 55.000 0.00 0.00 0.00 6.13 R
5562 8207 1.021390 GCACCACGTGGATTCCTCAG 61.021 60.000 40.21 18.23 38.94 3.35 R
6464 9109 1.065199 GCATCCCTGTGAACCTCATCA 60.065 52.381 0.00 0.00 0.00 3.07 R
7235 10011 2.813907 ACTCCATAGTCTCACAGCAGT 58.186 47.619 0.00 0.00 0.00 4.40 R
8067 10878 0.247460 TGATCCACTCCAAGACTGCG 59.753 55.000 0.00 0.00 0.00 5.18 R
9172 11988 0.038744 AATGGTCCAGCAGTCCCAAG 59.961 55.000 0.00 0.00 0.00 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.844420 AAGTCCTCATGCTAGCGC 57.156 55.556 10.77 0.00 0.00 5.92
26 27 2.885113 TGCTAGCGCATCTGACGT 59.115 55.556 11.47 0.00 42.25 4.34
27 28 1.517039 TGCTAGCGCATCTGACGTG 60.517 57.895 11.47 0.00 42.25 4.49
28 29 1.226688 GCTAGCGCATCTGACGTGA 60.227 57.895 11.47 0.00 35.78 4.35
29 30 1.475441 GCTAGCGCATCTGACGTGAC 61.475 60.000 11.47 0.00 35.78 3.67
30 31 0.179163 CTAGCGCATCTGACGTGACA 60.179 55.000 11.47 0.00 0.00 3.58
31 32 0.242555 TAGCGCATCTGACGTGACAA 59.757 50.000 11.47 0.00 0.00 3.18
32 33 0.390340 AGCGCATCTGACGTGACAAT 60.390 50.000 11.47 0.00 0.00 2.71
33 34 0.443869 GCGCATCTGACGTGACAATT 59.556 50.000 0.30 0.00 0.00 2.32
34 35 1.135972 GCGCATCTGACGTGACAATTT 60.136 47.619 0.30 0.00 0.00 1.82
35 36 2.762472 CGCATCTGACGTGACAATTTC 58.238 47.619 0.00 0.00 0.00 2.17
36 37 2.157474 CGCATCTGACGTGACAATTTCA 59.843 45.455 0.00 0.00 0.00 2.69
37 38 3.722957 CGCATCTGACGTGACAATTTCAG 60.723 47.826 0.00 0.00 37.43 3.02
38 39 3.425359 GCATCTGACGTGACAATTTCAGG 60.425 47.826 0.00 5.98 44.35 3.86
39 40 3.744238 TCTGACGTGACAATTTCAGGA 57.256 42.857 0.00 0.00 41.85 3.86
40 41 3.390135 TCTGACGTGACAATTTCAGGAC 58.610 45.455 0.00 9.71 41.85 3.85
41 42 3.130633 CTGACGTGACAATTTCAGGACA 58.869 45.455 0.00 12.42 41.85 4.02
42 43 3.536570 TGACGTGACAATTTCAGGACAA 58.463 40.909 0.00 1.76 41.85 3.18
43 44 3.559655 TGACGTGACAATTTCAGGACAAG 59.440 43.478 0.00 0.00 41.85 3.16
44 45 3.541632 ACGTGACAATTTCAGGACAAGT 58.458 40.909 13.53 0.00 41.85 3.16
45 46 3.560068 ACGTGACAATTTCAGGACAAGTC 59.440 43.478 13.53 0.00 41.85 3.01
79 80 7.284034 GGATAATGTTGGAGATGCCCTTATATG 59.716 40.741 0.00 0.00 34.97 1.78
115 116 2.285827 TTTTGCGAACCAACCTGTTG 57.714 45.000 3.01 3.01 40.13 3.33
116 117 1.178276 TTTGCGAACCAACCTGTTGT 58.822 45.000 9.03 0.00 38.85 3.32
117 118 1.178276 TTGCGAACCAACCTGTTGTT 58.822 45.000 9.03 3.99 38.85 2.83
128 129 4.447138 AACCTGTTGTTGGATGGTTAGA 57.553 40.909 0.00 0.00 38.99 2.10
129 130 4.021102 ACCTGTTGTTGGATGGTTAGAG 57.979 45.455 0.00 0.00 0.00 2.43
130 131 3.650942 ACCTGTTGTTGGATGGTTAGAGA 59.349 43.478 0.00 0.00 0.00 3.10
131 132 4.256920 CCTGTTGTTGGATGGTTAGAGAG 58.743 47.826 0.00 0.00 0.00 3.20
132 133 4.020218 CCTGTTGTTGGATGGTTAGAGAGA 60.020 45.833 0.00 0.00 0.00 3.10
133 134 4.894784 TGTTGTTGGATGGTTAGAGAGAC 58.105 43.478 0.00 0.00 0.00 3.36
134 135 4.593206 TGTTGTTGGATGGTTAGAGAGACT 59.407 41.667 0.00 0.00 0.00 3.24
135 136 4.808414 TGTTGGATGGTTAGAGAGACTG 57.192 45.455 0.00 0.00 0.00 3.51
136 137 4.160329 TGTTGGATGGTTAGAGAGACTGT 58.840 43.478 0.00 0.00 0.00 3.55
137 138 4.021104 TGTTGGATGGTTAGAGAGACTGTG 60.021 45.833 0.00 0.00 0.00 3.66
138 139 3.099905 TGGATGGTTAGAGAGACTGTGG 58.900 50.000 0.00 0.00 0.00 4.17
139 140 3.100671 GGATGGTTAGAGAGACTGTGGT 58.899 50.000 0.00 0.00 0.00 4.16
140 141 4.264217 TGGATGGTTAGAGAGACTGTGGTA 60.264 45.833 0.00 0.00 0.00 3.25
141 142 4.710375 GGATGGTTAGAGAGACTGTGGTAA 59.290 45.833 0.00 0.00 0.00 2.85
142 143 5.394333 GGATGGTTAGAGAGACTGTGGTAAC 60.394 48.000 0.00 0.00 0.00 2.50
143 144 3.830755 TGGTTAGAGAGACTGTGGTAACC 59.169 47.826 11.20 11.20 34.56 2.85
144 145 3.195182 GGTTAGAGAGACTGTGGTAACCC 59.805 52.174 8.41 0.00 30.32 4.11
145 146 2.696526 AGAGAGACTGTGGTAACCCA 57.303 50.000 0.00 0.00 38.87 4.51
146 147 2.530701 AGAGAGACTGTGGTAACCCAG 58.469 52.381 0.00 0.00 42.94 4.45
147 148 0.977395 AGAGACTGTGGTAACCCAGC 59.023 55.000 0.00 0.00 42.94 4.85
148 149 0.036294 GAGACTGTGGTAACCCAGCC 60.036 60.000 0.00 0.00 42.94 4.85
149 150 1.002502 GACTGTGGTAACCCAGCCC 60.003 63.158 0.00 0.00 42.94 5.19
150 151 1.772567 ACTGTGGTAACCCAGCCCA 60.773 57.895 0.00 0.00 42.94 5.36
152 153 2.035155 GTGGTAACCCAGCCCACC 59.965 66.667 0.00 0.00 42.94 4.61
153 154 2.450699 TGGTAACCCAGCCCACCA 60.451 61.111 0.00 0.00 38.72 4.17
154 155 2.355115 GGTAACCCAGCCCACCAG 59.645 66.667 0.00 0.00 0.00 4.00
155 156 2.355115 GTAACCCAGCCCACCAGG 59.645 66.667 0.00 0.00 39.47 4.45
167 168 2.364972 CCACCAGGGTTCAAGTCTTT 57.635 50.000 0.00 0.00 0.00 2.52
168 169 2.230660 CCACCAGGGTTCAAGTCTTTC 58.769 52.381 0.00 0.00 0.00 2.62
169 170 1.873591 CACCAGGGTTCAAGTCTTTCG 59.126 52.381 0.00 0.00 0.00 3.46
170 171 1.202770 ACCAGGGTTCAAGTCTTTCGG 60.203 52.381 0.00 0.00 0.00 4.30
171 172 1.071699 CCAGGGTTCAAGTCTTTCGGA 59.928 52.381 0.00 0.00 0.00 4.55
172 173 2.417719 CAGGGTTCAAGTCTTTCGGAG 58.582 52.381 0.00 0.00 0.00 4.63
173 174 1.348036 AGGGTTCAAGTCTTTCGGAGG 59.652 52.381 0.00 0.00 0.00 4.30
174 175 1.071857 GGGTTCAAGTCTTTCGGAGGT 59.928 52.381 0.00 0.00 0.00 3.85
175 176 2.143925 GGTTCAAGTCTTTCGGAGGTG 58.856 52.381 0.00 0.00 0.00 4.00
176 177 1.531578 GTTCAAGTCTTTCGGAGGTGC 59.468 52.381 0.00 0.00 0.00 5.01
177 178 1.048601 TCAAGTCTTTCGGAGGTGCT 58.951 50.000 0.00 0.00 0.00 4.40
178 179 1.000955 TCAAGTCTTTCGGAGGTGCTC 59.999 52.381 0.00 0.00 0.00 4.26
179 180 1.048601 AAGTCTTTCGGAGGTGCTCA 58.951 50.000 0.00 0.00 31.08 4.26
180 181 1.270907 AGTCTTTCGGAGGTGCTCAT 58.729 50.000 0.00 0.00 31.08 2.90
181 182 2.457598 AGTCTTTCGGAGGTGCTCATA 58.542 47.619 0.00 0.00 31.08 2.15
182 183 2.428890 AGTCTTTCGGAGGTGCTCATAG 59.571 50.000 0.00 0.00 31.08 2.23
183 184 2.427453 GTCTTTCGGAGGTGCTCATAGA 59.573 50.000 0.00 0.00 31.08 1.98
184 185 2.690497 TCTTTCGGAGGTGCTCATAGAG 59.310 50.000 0.00 0.00 31.08 2.43
185 186 1.403814 TTCGGAGGTGCTCATAGAGG 58.596 55.000 0.00 0.00 31.08 3.69
186 187 0.259065 TCGGAGGTGCTCATAGAGGT 59.741 55.000 0.00 0.00 31.08 3.85
187 188 1.493446 TCGGAGGTGCTCATAGAGGTA 59.507 52.381 0.00 0.00 31.08 3.08
188 189 2.108425 TCGGAGGTGCTCATAGAGGTAT 59.892 50.000 0.00 0.00 31.08 2.73
189 190 2.230025 CGGAGGTGCTCATAGAGGTATG 59.770 54.545 0.00 0.00 37.92 2.39
190 191 3.235200 GGAGGTGCTCATAGAGGTATGT 58.765 50.000 0.00 0.00 37.81 2.29
191 192 3.643792 GGAGGTGCTCATAGAGGTATGTT 59.356 47.826 0.00 0.00 37.81 2.71
192 193 4.502259 GGAGGTGCTCATAGAGGTATGTTG 60.502 50.000 0.00 0.00 37.81 3.33
193 194 4.033709 AGGTGCTCATAGAGGTATGTTGT 58.966 43.478 0.00 0.00 37.81 3.32
194 195 4.122776 GGTGCTCATAGAGGTATGTTGTG 58.877 47.826 0.00 0.00 37.81 3.33
195 196 3.557595 GTGCTCATAGAGGTATGTTGTGC 59.442 47.826 0.00 0.00 37.81 4.57
196 197 2.797156 GCTCATAGAGGTATGTTGTGCG 59.203 50.000 0.00 0.00 37.81 5.34
197 198 3.738281 GCTCATAGAGGTATGTTGTGCGT 60.738 47.826 0.00 0.00 37.81 5.24
198 199 3.780902 TCATAGAGGTATGTTGTGCGTG 58.219 45.455 0.00 0.00 37.81 5.34
199 200 2.004583 TAGAGGTATGTTGTGCGTGC 57.995 50.000 0.00 0.00 0.00 5.34
200 201 1.014044 AGAGGTATGTTGTGCGTGCG 61.014 55.000 0.00 0.00 0.00 5.34
201 202 1.289109 GAGGTATGTTGTGCGTGCGT 61.289 55.000 0.00 0.00 0.00 5.24
202 203 1.154488 GGTATGTTGTGCGTGCGTG 60.154 57.895 0.00 0.00 0.00 5.34
203 204 1.792057 GTATGTTGTGCGTGCGTGC 60.792 57.895 0.00 0.00 0.00 5.34
204 205 2.247437 TATGTTGTGCGTGCGTGCA 61.247 52.632 0.00 0.00 43.95 4.57
210 211 3.882025 TGCGTGCGTGCATTCATA 58.118 50.000 0.00 0.00 40.62 2.15
211 212 1.715000 TGCGTGCGTGCATTCATAG 59.285 52.632 0.00 0.00 40.62 2.23
212 213 1.010797 GCGTGCGTGCATTCATAGG 60.011 57.895 0.00 0.00 34.15 2.57
213 214 1.643292 CGTGCGTGCATTCATAGGG 59.357 57.895 0.00 0.00 0.00 3.53
214 215 1.775039 CGTGCGTGCATTCATAGGGG 61.775 60.000 0.00 0.00 0.00 4.79
215 216 1.152984 TGCGTGCATTCATAGGGGG 60.153 57.895 0.00 0.00 0.00 5.40
216 217 1.152963 GCGTGCATTCATAGGGGGT 60.153 57.895 0.00 0.00 0.00 4.95
217 218 1.447317 GCGTGCATTCATAGGGGGTG 61.447 60.000 0.00 0.00 0.00 4.61
218 219 0.180171 CGTGCATTCATAGGGGGTGA 59.820 55.000 0.00 0.00 0.00 4.02
219 220 1.811558 CGTGCATTCATAGGGGGTGAG 60.812 57.143 0.00 0.00 0.00 3.51
220 221 1.212935 GTGCATTCATAGGGGGTGAGT 59.787 52.381 0.00 0.00 0.00 3.41
221 222 1.212688 TGCATTCATAGGGGGTGAGTG 59.787 52.381 0.00 0.00 36.67 3.51
222 223 1.212935 GCATTCATAGGGGGTGAGTGT 59.787 52.381 0.00 0.00 36.18 3.55
223 224 2.438021 GCATTCATAGGGGGTGAGTGTA 59.562 50.000 0.00 0.00 36.18 2.90
224 225 3.073062 GCATTCATAGGGGGTGAGTGTAT 59.927 47.826 0.00 0.00 36.18 2.29
225 226 4.645535 CATTCATAGGGGGTGAGTGTATG 58.354 47.826 0.00 0.00 31.15 2.39
226 227 2.047061 TCATAGGGGGTGAGTGTATGC 58.953 52.381 0.00 0.00 0.00 3.14
227 228 1.768275 CATAGGGGGTGAGTGTATGCA 59.232 52.381 0.00 0.00 0.00 3.96
228 229 1.200519 TAGGGGGTGAGTGTATGCAC 58.799 55.000 5.71 5.71 45.57 4.57
241 242 5.256006 GTGTATGCACTTGTATATGAGCG 57.744 43.478 6.69 0.00 42.13 5.03
242 243 3.740832 TGTATGCACTTGTATATGAGCGC 59.259 43.478 0.00 0.00 0.00 5.92
243 244 2.602257 TGCACTTGTATATGAGCGCT 57.398 45.000 11.27 11.27 0.00 5.92
244 245 2.905075 TGCACTTGTATATGAGCGCTT 58.095 42.857 13.26 0.00 0.00 4.68
245 246 2.609002 TGCACTTGTATATGAGCGCTTG 59.391 45.455 13.26 2.09 0.00 4.01
246 247 2.032549 GCACTTGTATATGAGCGCTTGG 60.033 50.000 13.26 0.00 0.00 3.61
247 248 2.545526 CACTTGTATATGAGCGCTTGGG 59.454 50.000 13.26 0.00 0.00 4.12
248 249 2.170607 ACTTGTATATGAGCGCTTGGGT 59.829 45.455 13.26 0.94 0.00 4.51
249 250 2.526304 TGTATATGAGCGCTTGGGTC 57.474 50.000 13.26 0.00 43.52 4.46
250 251 2.039418 TGTATATGAGCGCTTGGGTCT 58.961 47.619 13.26 0.00 43.60 3.85
251 252 2.224042 TGTATATGAGCGCTTGGGTCTG 60.224 50.000 13.26 0.00 43.60 3.51
252 253 0.833287 ATATGAGCGCTTGGGTCTGT 59.167 50.000 13.26 0.00 43.60 3.41
253 254 0.108186 TATGAGCGCTTGGGTCTGTG 60.108 55.000 13.26 0.00 43.60 3.66
254 255 2.031163 GAGCGCTTGGGTCTGTGT 59.969 61.111 13.26 0.00 40.05 3.72
255 256 1.598130 GAGCGCTTGGGTCTGTGTT 60.598 57.895 13.26 0.00 40.05 3.32
256 257 0.320421 GAGCGCTTGGGTCTGTGTTA 60.320 55.000 13.26 0.00 40.05 2.41
257 258 0.324943 AGCGCTTGGGTCTGTGTTAT 59.675 50.000 2.64 0.00 0.00 1.89
258 259 0.447801 GCGCTTGGGTCTGTGTTATG 59.552 55.000 0.00 0.00 0.00 1.90
259 260 1.808411 CGCTTGGGTCTGTGTTATGT 58.192 50.000 0.00 0.00 0.00 2.29
260 261 2.151202 CGCTTGGGTCTGTGTTATGTT 58.849 47.619 0.00 0.00 0.00 2.71
261 262 2.159627 CGCTTGGGTCTGTGTTATGTTC 59.840 50.000 0.00 0.00 0.00 3.18
262 263 3.146066 GCTTGGGTCTGTGTTATGTTCA 58.854 45.455 0.00 0.00 0.00 3.18
263 264 3.568007 GCTTGGGTCTGTGTTATGTTCAA 59.432 43.478 0.00 0.00 0.00 2.69
264 265 4.037446 GCTTGGGTCTGTGTTATGTTCAAA 59.963 41.667 0.00 0.00 0.00 2.69
297 298 5.750067 TGTCGAGGGAAATATAGTTAAACGC 59.250 40.000 0.00 0.00 0.00 4.84
336 347 1.606737 GCACGAGCAGGAGAAAAGAGT 60.607 52.381 0.00 0.00 41.58 3.24
367 378 3.066190 ACGCGTGCCTAGCCTACA 61.066 61.111 12.93 0.00 0.00 2.74
977 3104 5.666265 GGAATTAAACTAGGAGGAGGAGGAA 59.334 44.000 0.00 0.00 0.00 3.36
982 3109 2.514582 ACTAGGAGGAGGAGGAAATCGA 59.485 50.000 0.00 0.00 0.00 3.59
1203 3330 3.931468 CCTGATGATTCCGTGATGCTATC 59.069 47.826 0.00 0.00 0.00 2.08
1396 3523 2.125350 CCTCCTGCGCCTCAGAAC 60.125 66.667 4.18 0.00 45.72 3.01
1420 3547 1.905215 CCTGTCCATGTTCCTGTCTCT 59.095 52.381 0.00 0.00 0.00 3.10
1470 3597 1.816835 CATGCTCCATTCTGCTGTGTT 59.183 47.619 0.00 0.00 0.00 3.32
1584 3711 1.078143 GCACCCTCCATGTCACCTC 60.078 63.158 0.00 0.00 0.00 3.85
1764 3893 2.028420 TATGTGCTGTGACCATCTGC 57.972 50.000 0.00 0.00 0.00 4.26
1823 3952 5.049828 CGGATAGTAGACATGCATGTTGAA 58.950 41.667 31.82 17.83 41.95 2.69
1824 3953 5.050769 CGGATAGTAGACATGCATGTTGAAC 60.051 44.000 31.82 26.30 41.95 3.18
1836 3965 1.588674 TGTTGAACTGCCTGGTAACG 58.411 50.000 0.00 0.00 42.51 3.18
1849 3978 2.290641 CTGGTAACGTTCTGCTGCTTTT 59.709 45.455 2.82 0.00 42.51 2.27
1946 4078 1.580059 ATGGTCTCCCGGTATGTTGT 58.420 50.000 0.00 0.00 0.00 3.32
2015 4147 7.335627 TCAGTTTCTGGTTCTTTTCTGACTTA 58.664 34.615 0.00 0.00 31.51 2.24
2016 4148 7.280205 TCAGTTTCTGGTTCTTTTCTGACTTAC 59.720 37.037 0.00 0.00 31.51 2.34
2017 4149 6.258068 AGTTTCTGGTTCTTTTCTGACTTACG 59.742 38.462 0.00 0.00 0.00 3.18
2180 4312 4.826274 TGCATAGCTGTTCTTTAGAGGT 57.174 40.909 0.00 0.00 0.00 3.85
2188 4320 6.635755 AGCTGTTCTTTAGAGGTAGTCAATC 58.364 40.000 0.00 0.00 0.00 2.67
2202 4334 5.880332 GGTAGTCAATCTTTGCTGGATGTAA 59.120 40.000 0.00 0.00 0.00 2.41
2207 4339 3.120321 TCTTTGCTGGATGTAACGTGT 57.880 42.857 0.00 0.00 0.00 4.49
2211 4343 1.870402 TGCTGGATGTAACGTGTTGTG 59.130 47.619 0.00 0.00 0.00 3.33
2265 4397 4.038042 AGTTTCTGGAGCCTTTAAACAAGC 59.962 41.667 0.00 0.00 33.52 4.01
2442 4574 2.107378 TCTAAAACAGCCACATCCCACA 59.893 45.455 0.00 0.00 0.00 4.17
2501 4705 2.910994 GCAGCAGCATCATCCCCC 60.911 66.667 0.00 0.00 41.58 5.40
2502 4706 2.599032 CAGCAGCATCATCCCCCA 59.401 61.111 0.00 0.00 0.00 4.96
2503 4707 1.826921 CAGCAGCATCATCCCCCAC 60.827 63.158 0.00 0.00 0.00 4.61
2504 4708 2.520260 GCAGCATCATCCCCCACC 60.520 66.667 0.00 0.00 0.00 4.61
2505 4709 2.203252 CAGCATCATCCCCCACCG 60.203 66.667 0.00 0.00 0.00 4.94
2506 4710 4.195334 AGCATCATCCCCCACCGC 62.195 66.667 0.00 0.00 0.00 5.68
2508 4712 4.935495 CATCATCCCCCACCGCCG 62.935 72.222 0.00 0.00 0.00 6.46
2549 4753 3.446570 GCAGCAGCACCATCCCAC 61.447 66.667 0.00 0.00 41.58 4.61
2578 4782 3.988678 AGCAGCAACAGCCCCCAT 61.989 61.111 0.00 0.00 0.00 4.00
2637 4841 1.127343 AGGATGCTCTTGGTCCTAGC 58.873 55.000 0.00 0.38 40.49 3.42
2643 4847 1.280457 CTCTTGGTCCTAGCCAACCT 58.720 55.000 8.20 0.00 42.98 3.50
2695 4899 4.001652 AGTGAAGAGAGATGTGCATGTTG 58.998 43.478 0.00 0.00 0.00 3.33
2718 4922 5.221481 TGCTCCTTCAATTCAGAATTTTGCA 60.221 36.000 5.58 7.60 0.00 4.08
2727 4931 3.819368 TCAGAATTTTGCACCACAGAGA 58.181 40.909 0.00 0.00 0.00 3.10
2783 4987 3.181397 CGATGCATTTTCACCATCAACC 58.819 45.455 0.00 0.00 36.12 3.77
2845 5049 0.609957 TGTCCCAAGCTCAATGCAGG 60.610 55.000 0.00 0.00 45.94 4.85
2848 5052 0.896940 CCCAAGCTCAATGCAGGTGT 60.897 55.000 0.00 0.00 45.94 4.16
2853 5057 0.454600 GCTCAATGCAGGTGTCCATG 59.545 55.000 0.00 0.00 42.31 3.66
2920 5124 4.953667 TGTCCAAAATATGCAGCAACAAA 58.046 34.783 0.00 0.00 0.00 2.83
2977 5181 3.165058 TGTATCCGTCTGTTGCTCATC 57.835 47.619 0.00 0.00 0.00 2.92
3177 5381 1.331756 GTCAGTGGTGTTGCAACTCAG 59.668 52.381 28.61 15.92 0.00 3.35
3228 5432 1.755380 ACCTCGTATAACCAGTCAGGC 59.245 52.381 0.00 0.00 43.14 4.85
3283 5487 0.251297 TGGATCACAGGGCAGGTTTG 60.251 55.000 0.00 0.00 0.00 2.93
3318 5522 4.015084 CTCAAGCTGGTCAATCAATTCCT 58.985 43.478 0.00 0.00 0.00 3.36
3330 5534 6.018469 TCAATCAATTCCTTTCATGAACCCT 58.982 36.000 7.89 0.00 0.00 4.34
3385 5589 1.379044 AACATAGCTGGGCCTGCAC 60.379 57.895 32.94 8.90 0.00 4.57
3486 5690 0.826715 TGCCTGCAGGTAGATCAGAC 59.173 55.000 32.81 13.92 37.57 3.51
3495 5699 4.440250 GCAGGTAGATCAGACGCTTCTAAA 60.440 45.833 0.00 0.00 0.00 1.85
3594 5798 2.829120 ACCAGTTAGTGAGAAGGAGAGC 59.171 50.000 0.00 0.00 0.00 4.09
3621 5825 2.703007 ACCATCTATCCCAGAGAAGCAC 59.297 50.000 0.00 0.00 36.48 4.40
3635 5839 4.348168 AGAGAAGCACTCCAAGGAAAGTAA 59.652 41.667 7.20 0.00 45.96 2.24
3667 5871 0.742281 CGTGGAGAAGCATCCCACTG 60.742 60.000 20.14 13.26 41.23 3.66
3780 5993 6.996509 TGAAAAGAAAGAATCCCTTCCAATG 58.003 36.000 0.00 0.00 33.02 2.82
3886 6529 3.132289 TCGTTTCCTATTCCTAGCACTGG 59.868 47.826 0.00 0.00 0.00 4.00
3902 6545 3.747529 GCACTGGTTTTGCATTTTAGCAT 59.252 39.130 0.00 0.00 45.19 3.79
3946 6589 5.443283 ACTCACATATTGCATCCATTCAGT 58.557 37.500 0.00 0.00 0.00 3.41
3991 6634 0.315251 GGGGCAAACTTCTGTGAAGC 59.685 55.000 7.17 0.00 0.00 3.86
3996 6639 2.099756 GCAAACTTCTGTGAAGCTTGGT 59.900 45.455 18.78 0.00 0.00 3.67
4023 6666 1.339929 GTGGTTGGTCACATGGAAACC 59.660 52.381 0.00 1.91 40.59 3.27
4042 6685 4.537135 ACCAAGAGCTTCGATAGTGAAA 57.463 40.909 0.00 0.00 37.40 2.69
4074 6717 1.909700 CCAGCAAGGTTTCAGGCTTA 58.090 50.000 0.00 0.00 33.60 3.09
4195 6838 9.374838 AGGTTAATGAAAGAATCAATGAATTGC 57.625 29.630 0.00 0.00 42.54 3.56
4203 6848 7.951530 AAGAATCAATGAATTGCGTCTTTTT 57.048 28.000 11.93 0.06 37.34 1.94
4218 6863 7.199766 TGCGTCTTTTTGATTTTCTAACATGT 58.800 30.769 0.00 0.00 0.00 3.21
4374 7019 6.542821 ACTCACCAAATTTCACCTGAATCTA 58.457 36.000 0.00 0.00 33.54 1.98
4381 7026 7.415989 CCAAATTTCACCTGAATCTAGTGATGG 60.416 40.741 6.73 7.57 40.06 3.51
4415 7060 9.676861 ATGTCTGATTCTACTGAAAATGAATCA 57.323 29.630 14.02 14.02 46.84 2.57
4423 7068 8.853077 TCTACTGAAAATGAATCACATGACTT 57.147 30.769 0.00 0.00 39.39 3.01
4426 7071 7.365741 ACTGAAAATGAATCACATGACTTCAC 58.634 34.615 0.00 0.00 39.39 3.18
4547 7192 2.674177 CACAACATCTGTACCGGAGGAC 60.674 54.545 9.46 3.35 45.29 3.85
4612 7257 0.035725 TCAGCTTCTGTGGATGCCAG 60.036 55.000 0.00 0.00 41.66 4.85
4627 7272 1.593787 CCAGCGATGTGTCTGAGGT 59.406 57.895 0.00 0.00 32.26 3.85
4663 7308 3.196469 TCATCAGAGTCTACCAGCCAAAG 59.804 47.826 0.00 0.00 0.00 2.77
4665 7310 3.774734 TCAGAGTCTACCAGCCAAAGTA 58.225 45.455 0.00 0.00 0.00 2.24
4670 7315 3.072211 GTCTACCAGCCAAAGTACCAAC 58.928 50.000 0.00 0.00 0.00 3.77
4703 7348 5.489792 TCAGAAGTAGCATTCAGGAAACT 57.510 39.130 0.00 0.00 46.44 2.66
4718 7363 5.248380 AGGAAACTGGATTAGCTGTTTCT 57.752 39.130 18.85 7.62 44.25 2.52
4775 7420 0.322816 TTGCATCTGAGGGGCAAGTC 60.323 55.000 7.43 0.00 42.12 3.01
4805 7450 1.686052 GATGGAGCGAAGGATGAGTCT 59.314 52.381 0.00 0.00 0.00 3.24
4808 7453 2.303175 GGAGCGAAGGATGAGTCTAGT 58.697 52.381 0.00 0.00 0.00 2.57
4828 7473 0.250467 ACTGAGCAATCAAGTGCCGT 60.250 50.000 0.00 0.00 46.14 5.68
4881 7526 3.057946 GGAAAAACCTACTGCAGAGCTTG 60.058 47.826 23.35 6.34 35.41 4.01
4896 7541 1.071699 AGCTTGCCCGAACAAAGTCTA 59.928 47.619 0.00 0.00 0.00 2.59
4916 7561 3.864789 ACAGCTGGGAGAAAGAAGAAA 57.135 42.857 19.93 0.00 0.00 2.52
4964 7609 0.105224 CTGCTGGGAGCTCAGATCTG 59.895 60.000 17.07 17.07 42.97 2.90
5018 7663 2.072298 GAGAGTGTTGCCACATCAGAC 58.928 52.381 0.00 0.00 44.39 3.51
5083 7728 2.843113 CTGAGGAATCAGAAAGGGAGGT 59.157 50.000 0.00 0.00 39.99 3.85
5090 7735 2.338809 TCAGAAAGGGAGGTGATGTGT 58.661 47.619 0.00 0.00 0.00 3.72
5096 7741 0.250513 GGGAGGTGATGTGTGAGGAC 59.749 60.000 0.00 0.00 0.00 3.85
5261 7906 9.760660 CGAAAGAAATATTCTCGTGATTTTCTT 57.239 29.630 18.02 18.02 42.22 2.52
5417 8062 3.717400 TCTGATAGACCAACATCTCGC 57.283 47.619 0.00 0.00 0.00 5.03
5525 8170 1.112315 TGACAAACGGCCCAGCAATT 61.112 50.000 0.00 0.00 0.00 2.32
5562 8207 2.109126 GGAGGCGCTCATGGTGTTC 61.109 63.158 7.64 0.00 31.08 3.18
5578 8223 1.001974 TGTTCTGAGGAATCCACGTGG 59.998 52.381 29.26 29.26 33.71 4.94
5585 8230 1.298859 GGAATCCACGTGGTGCACTC 61.299 60.000 32.74 20.87 36.34 3.51
5918 8563 6.549364 TGGAACCAACTTTCTGTGAAATGTAT 59.451 34.615 0.00 0.00 0.00 2.29
6032 8677 2.260822 CAAGAGGAGTTTGAGAGGGGA 58.739 52.381 0.00 0.00 0.00 4.81
6149 8794 3.334691 GCGCATGCTGGGTAATATTAGA 58.665 45.455 17.13 0.00 38.39 2.10
6180 8825 7.004086 TGGAGAATTGTACAAAAAGAGGATGT 58.996 34.615 13.23 0.00 0.00 3.06
6356 9001 1.258982 GATAGAATGCGCAACCTGTCG 59.741 52.381 17.11 0.00 0.00 4.35
6464 9109 1.009997 TGGATGGCCCCAAGAAGATT 58.990 50.000 0.00 0.00 32.31 2.40
6710 9361 1.550130 CCCTTCCCCAGCGTTCTGTA 61.550 60.000 0.00 0.00 38.66 2.74
6828 9479 0.537143 TGTTGACCAGCGCAGGATTT 60.537 50.000 27.14 2.31 0.00 2.17
6921 9572 5.097742 TCGATTTTCTGGGAGAATAGCAA 57.902 39.130 0.00 0.00 33.67 3.91
6995 9646 7.711339 GGTCGTTCAGGAAATAAATCATACTCT 59.289 37.037 0.00 0.00 0.00 3.24
7052 9703 9.684702 ACCATCCGGGAATATTATAGGTAATAT 57.315 33.333 0.00 0.00 40.90 1.28
7160 9811 7.048512 GGTGATGCCTGTCTTACTATTTAAGT 58.951 38.462 0.00 0.00 42.62 2.24
7161 9812 7.224949 GGTGATGCCTGTCTTACTATTTAAGTC 59.775 40.741 0.00 0.00 39.80 3.01
7162 9813 7.982354 GTGATGCCTGTCTTACTATTTAAGTCT 59.018 37.037 0.00 0.00 39.80 3.24
7163 9814 9.197306 TGATGCCTGTCTTACTATTTAAGTCTA 57.803 33.333 0.00 0.00 39.80 2.59
7235 10011 7.388500 GGCAACTGGTAATTTGTTGTAGTACTA 59.612 37.037 0.00 0.00 41.93 1.82
7250 10026 6.651086 TGTAGTACTACTGCTGTGAGACTAT 58.349 40.000 28.56 0.00 37.00 2.12
7252 10028 4.884744 AGTACTACTGCTGTGAGACTATGG 59.115 45.833 6.48 0.00 0.00 2.74
7253 10029 3.969553 ACTACTGCTGTGAGACTATGGA 58.030 45.455 6.48 0.00 0.00 3.41
7299 10099 4.806330 TCTTAGTACTTCGTGCCTTTCAG 58.194 43.478 0.00 0.00 0.00 3.02
7326 10126 7.643764 AGTTTATTGTTGTGAAATTCTCGTGTG 59.356 33.333 0.00 0.00 0.00 3.82
7638 10449 5.633830 AGGAAGTTGCATTGTGTATTGAG 57.366 39.130 0.00 0.00 0.00 3.02
7755 10566 2.488153 GCTCTTTGTCGGGCTTTACAAT 59.512 45.455 0.00 0.00 35.64 2.71
7803 10614 0.908198 AGCTCATTGAGGGGTGAGTC 59.092 55.000 15.28 0.00 42.91 3.36
7818 10629 1.425066 TGAGTCCCTTTGTCCTTGCAT 59.575 47.619 0.00 0.00 0.00 3.96
7840 10651 2.012902 GCCCATTGATGCTCACTGGC 62.013 60.000 13.53 9.16 43.46 4.85
7852 10663 2.997315 ACTGGCGAGTGCTGGCTA 60.997 61.111 0.00 0.00 42.25 3.93
7881 10692 5.827797 TGACCATATTTGTAGGCTTTCATCC 59.172 40.000 0.00 0.00 0.00 3.51
7899 10710 2.426522 TCCGTTCTTGCTTCATTGGAG 58.573 47.619 0.00 0.00 0.00 3.86
8067 10878 2.758089 CGCAGCTGATGTCCTTGGC 61.758 63.158 20.43 0.00 0.00 4.52
8087 10898 1.738365 CGCAGTCTTGGAGTGGATCAG 60.738 57.143 0.00 0.00 33.95 2.90
8202 11013 2.821969 GTTGGATGCCTTCATGTTGACT 59.178 45.455 0.00 0.00 31.96 3.41
8269 11080 6.292381 CGTCTTAGAATTGCATACCAGTTAGC 60.292 42.308 0.00 0.00 0.00 3.09
8270 11081 6.763610 GTCTTAGAATTGCATACCAGTTAGCT 59.236 38.462 0.00 0.00 0.00 3.32
8273 11084 5.749462 AGAATTGCATACCAGTTAGCTCTT 58.251 37.500 0.00 0.00 0.00 2.85
8545 11356 5.833667 TCCTACTGTGAAGTGAAGAAGAAGA 59.166 40.000 0.00 0.00 0.00 2.87
8546 11357 6.495181 TCCTACTGTGAAGTGAAGAAGAAGAT 59.505 38.462 0.00 0.00 0.00 2.40
8547 11358 6.589523 CCTACTGTGAAGTGAAGAAGAAGATG 59.410 42.308 0.00 0.00 0.00 2.90
8589 11400 5.818678 TGAGACTTGTTAGTGGTGGTAAT 57.181 39.130 0.00 0.00 33.84 1.89
8617 11428 0.889186 GCGGATGGACACTGGTTGTT 60.889 55.000 0.00 0.00 39.17 2.83
8630 11441 2.913578 TTGTTGCAGGCAGCTGGG 60.914 61.111 17.12 0.00 45.94 4.45
8919 11734 3.685214 CTCGCGCGTCTAGCTTGGT 62.685 63.158 30.98 0.00 45.59 3.67
8925 11740 2.027073 CGTCTAGCTTGGTTGCGCA 61.027 57.895 5.66 5.66 38.13 6.09
8930 11745 4.043200 GCTTGGTTGCGCACTCCC 62.043 66.667 22.65 17.62 0.00 4.30
8960 11776 6.124088 TGTTTCTCAACTTGCTTTCTTCTC 57.876 37.500 0.00 0.00 33.58 2.87
8961 11777 5.201181 GTTTCTCAACTTGCTTTCTTCTCG 58.799 41.667 0.00 0.00 0.00 4.04
8962 11778 2.802816 TCTCAACTTGCTTTCTTCTCGC 59.197 45.455 0.00 0.00 0.00 5.03
8963 11779 2.545526 CTCAACTTGCTTTCTTCTCGCA 59.454 45.455 0.00 0.00 0.00 5.10
8964 11780 3.141398 TCAACTTGCTTTCTTCTCGCAT 58.859 40.909 0.00 0.00 33.15 4.73
8965 11781 3.058708 TCAACTTGCTTTCTTCTCGCATG 60.059 43.478 0.00 0.00 35.64 4.06
8966 11782 2.498167 ACTTGCTTTCTTCTCGCATGT 58.502 42.857 0.00 0.00 37.26 3.21
8967 11783 2.225019 ACTTGCTTTCTTCTCGCATGTG 59.775 45.455 0.00 0.00 39.55 3.21
8968 11784 2.168326 TGCTTTCTTCTCGCATGTGA 57.832 45.000 8.98 8.98 0.00 3.58
8969 11785 2.703416 TGCTTTCTTCTCGCATGTGAT 58.297 42.857 9.87 0.00 0.00 3.06
8970 11786 2.417586 TGCTTTCTTCTCGCATGTGATG 59.582 45.455 9.87 4.52 0.00 3.07
8990 11806 9.851686 TGTGATGCATTCCTAAATATAAGTCTT 57.148 29.630 0.00 0.00 0.00 3.01
9018 11834 9.190858 CAAGAGATTTCACTATAGACTACATGC 57.809 37.037 6.78 0.00 0.00 4.06
9019 11835 7.589395 AGAGATTTCACTATAGACTACATGCG 58.411 38.462 6.78 0.00 0.00 4.73
9020 11836 6.682746 AGATTTCACTATAGACTACATGCGG 58.317 40.000 6.78 0.00 0.00 5.69
9021 11837 6.490381 AGATTTCACTATAGACTACATGCGGA 59.510 38.462 6.78 0.00 0.00 5.54
9022 11838 5.690997 TTCACTATAGACTACATGCGGAG 57.309 43.478 6.78 0.00 0.00 4.63
9036 11852 2.559785 CGGAGCAAAATGAGTGGCT 58.440 52.632 0.00 0.00 39.75 4.75
9037 11853 0.883833 CGGAGCAAAATGAGTGGCTT 59.116 50.000 0.00 0.00 36.59 4.35
9038 11854 2.083774 CGGAGCAAAATGAGTGGCTTA 58.916 47.619 0.00 0.00 36.59 3.09
9039 11855 2.684881 CGGAGCAAAATGAGTGGCTTAT 59.315 45.455 0.00 0.00 36.59 1.73
9040 11856 3.876914 CGGAGCAAAATGAGTGGCTTATA 59.123 43.478 0.00 0.00 36.59 0.98
9041 11857 4.260784 CGGAGCAAAATGAGTGGCTTATAC 60.261 45.833 0.00 0.00 36.59 1.47
9042 11858 4.884164 GGAGCAAAATGAGTGGCTTATACT 59.116 41.667 0.00 0.00 36.59 2.12
9043 11859 5.358160 GGAGCAAAATGAGTGGCTTATACTT 59.642 40.000 0.00 0.00 36.59 2.24
9044 11860 6.127619 GGAGCAAAATGAGTGGCTTATACTTT 60.128 38.462 0.00 0.00 36.59 2.66
9045 11861 7.067008 GGAGCAAAATGAGTGGCTTATACTTTA 59.933 37.037 0.00 0.00 36.59 1.85
9046 11862 8.348285 AGCAAAATGAGTGGCTTATACTTTAA 57.652 30.769 0.00 0.00 31.34 1.52
9047 11863 8.802267 AGCAAAATGAGTGGCTTATACTTTAAA 58.198 29.630 0.00 0.00 31.34 1.52
9048 11864 9.418045 GCAAAATGAGTGGCTTATACTTTAAAA 57.582 29.630 0.00 0.00 0.00 1.52
9051 11867 6.753107 TGAGTGGCTTATACTTTAAAAGGC 57.247 37.500 4.00 4.00 43.83 4.35
9052 11868 5.353123 TGAGTGGCTTATACTTTAAAAGGCG 59.647 40.000 6.07 0.00 45.81 5.52
9053 11869 5.250982 AGTGGCTTATACTTTAAAAGGCGT 58.749 37.500 6.07 0.00 45.81 5.68
9054 11870 5.353400 AGTGGCTTATACTTTAAAAGGCGTC 59.647 40.000 6.07 0.00 45.81 5.19
9055 11871 5.353400 GTGGCTTATACTTTAAAAGGCGTCT 59.647 40.000 6.07 0.00 45.81 4.18
9056 11872 6.536224 GTGGCTTATACTTTAAAAGGCGTCTA 59.464 38.462 0.00 0.00 45.81 2.59
9057 11873 7.226128 GTGGCTTATACTTTAAAAGGCGTCTAT 59.774 37.037 0.00 0.00 45.81 1.98
9058 11874 8.423349 TGGCTTATACTTTAAAAGGCGTCTATA 58.577 33.333 0.00 0.00 45.81 1.31
9059 11875 9.433153 GGCTTATACTTTAAAAGGCGTCTATAT 57.567 33.333 0.00 0.00 36.29 0.86
9066 11882 9.477484 ACTTTAAAAGGCGTCTATATACATCTG 57.523 33.333 0.00 0.00 0.00 2.90
9067 11883 9.692749 CTTTAAAAGGCGTCTATATACATCTGA 57.307 33.333 0.00 0.00 0.00 3.27
9070 11886 8.539770 AAAAGGCGTCTATATACATCTGAATG 57.460 34.615 0.00 0.00 38.93 2.67
9085 11901 7.099764 ACATCTGAATGTAGTTTCTACAGTGG 58.900 38.462 13.20 7.31 44.38 4.00
9086 11902 6.911250 TCTGAATGTAGTTTCTACAGTGGA 57.089 37.500 13.20 9.03 0.00 4.02
9087 11903 7.297936 TCTGAATGTAGTTTCTACAGTGGAA 57.702 36.000 13.20 0.00 0.00 3.53
9088 11904 7.907389 TCTGAATGTAGTTTCTACAGTGGAAT 58.093 34.615 13.20 0.00 0.00 3.01
9089 11905 8.035394 TCTGAATGTAGTTTCTACAGTGGAATC 58.965 37.037 13.20 0.00 0.00 2.52
9090 11906 7.907389 TGAATGTAGTTTCTACAGTGGAATCT 58.093 34.615 13.20 13.18 0.00 2.40
9091 11907 8.035394 TGAATGTAGTTTCTACAGTGGAATCTC 58.965 37.037 12.25 6.79 0.00 2.75
9092 11908 7.726033 ATGTAGTTTCTACAGTGGAATCTCT 57.274 36.000 12.25 8.44 0.00 3.10
9093 11909 8.824756 ATGTAGTTTCTACAGTGGAATCTCTA 57.175 34.615 12.25 7.67 0.00 2.43
9094 11910 8.645814 TGTAGTTTCTACAGTGGAATCTCTAA 57.354 34.615 12.25 0.19 0.00 2.10
9095 11911 9.085645 TGTAGTTTCTACAGTGGAATCTCTAAA 57.914 33.333 12.25 4.09 0.00 1.85
9096 11912 9.924650 GTAGTTTCTACAGTGGAATCTCTAAAA 57.075 33.333 12.25 0.00 0.00 1.52
9098 11914 9.495572 AGTTTCTACAGTGGAATCTCTAAAAAG 57.504 33.333 0.00 0.00 0.00 2.27
9099 11915 9.490379 GTTTCTACAGTGGAATCTCTAAAAAGA 57.510 33.333 0.00 0.00 0.00 2.52
9100 11916 9.490379 TTTCTACAGTGGAATCTCTAAAAAGAC 57.510 33.333 0.00 0.00 0.00 3.01
9101 11917 8.423906 TCTACAGTGGAATCTCTAAAAAGACT 57.576 34.615 0.00 0.00 0.00 3.24
9102 11918 8.871125 TCTACAGTGGAATCTCTAAAAAGACTT 58.129 33.333 0.00 0.00 0.00 3.01
9120 11936 8.926092 AAAGACTTATATTTAGGAATGGAGGC 57.074 34.615 0.00 0.00 0.00 4.70
9121 11937 7.633018 AGACTTATATTTAGGAATGGAGGCA 57.367 36.000 0.00 0.00 0.00 4.75
9122 11938 7.684529 AGACTTATATTTAGGAATGGAGGCAG 58.315 38.462 0.00 0.00 0.00 4.85
9123 11939 7.293535 AGACTTATATTTAGGAATGGAGGCAGT 59.706 37.037 0.00 0.00 0.00 4.40
9124 11940 8.506196 ACTTATATTTAGGAATGGAGGCAGTA 57.494 34.615 0.00 0.00 0.00 2.74
9125 11941 9.117223 ACTTATATTTAGGAATGGAGGCAGTAT 57.883 33.333 0.00 0.00 0.00 2.12
9129 11945 6.763715 TTTAGGAATGGAGGCAGTATATGT 57.236 37.500 0.00 0.00 0.00 2.29
9130 11946 4.630644 AGGAATGGAGGCAGTATATGTG 57.369 45.455 0.00 0.00 0.00 3.21
9131 11947 4.234550 AGGAATGGAGGCAGTATATGTGA 58.765 43.478 0.00 0.00 0.00 3.58
9132 11948 4.848660 AGGAATGGAGGCAGTATATGTGAT 59.151 41.667 0.00 0.00 0.00 3.06
9133 11949 6.025539 AGGAATGGAGGCAGTATATGTGATA 58.974 40.000 0.00 0.00 0.00 2.15
9134 11950 6.501805 AGGAATGGAGGCAGTATATGTGATAA 59.498 38.462 0.00 0.00 0.00 1.75
9135 11951 7.017551 AGGAATGGAGGCAGTATATGTGATAAA 59.982 37.037 0.00 0.00 0.00 1.40
9136 11952 7.665559 GGAATGGAGGCAGTATATGTGATAAAA 59.334 37.037 0.00 0.00 0.00 1.52
9137 11953 8.995027 AATGGAGGCAGTATATGTGATAAAAA 57.005 30.769 0.00 0.00 0.00 1.94
9182 11998 5.453567 AACAAATAAGAACTTGGGACTGC 57.546 39.130 0.00 0.00 0.00 4.40
9183 11999 4.729868 ACAAATAAGAACTTGGGACTGCT 58.270 39.130 0.00 0.00 0.00 4.24
9184 12000 4.520492 ACAAATAAGAACTTGGGACTGCTG 59.480 41.667 0.00 0.00 0.00 4.41
9185 12001 2.859165 TAAGAACTTGGGACTGCTGG 57.141 50.000 0.00 0.00 0.00 4.85
9186 12002 1.140312 AAGAACTTGGGACTGCTGGA 58.860 50.000 0.00 0.00 0.00 3.86
9187 12003 0.398318 AGAACTTGGGACTGCTGGAC 59.602 55.000 0.00 0.00 0.00 4.02
9188 12004 0.606673 GAACTTGGGACTGCTGGACC 60.607 60.000 0.00 0.00 0.00 4.46
9189 12005 1.352622 AACTTGGGACTGCTGGACCA 61.353 55.000 0.00 0.00 0.00 4.02
9190 12006 1.136329 ACTTGGGACTGCTGGACCAT 61.136 55.000 8.85 0.00 32.18 3.55
9191 12007 0.038744 CTTGGGACTGCTGGACCATT 59.961 55.000 8.85 0.00 32.18 3.16
9192 12008 0.482446 TTGGGACTGCTGGACCATTT 59.518 50.000 8.85 0.00 32.18 2.32
9193 12009 0.251297 TGGGACTGCTGGACCATTTG 60.251 55.000 0.00 0.00 0.00 2.32
9194 12010 0.967380 GGGACTGCTGGACCATTTGG 60.967 60.000 0.00 0.00 42.17 3.28
9195 12011 1.598701 GGACTGCTGGACCATTTGGC 61.599 60.000 0.00 0.00 39.32 4.52
9196 12012 0.610232 GACTGCTGGACCATTTGGCT 60.610 55.000 0.00 0.00 39.32 4.75
9197 12013 0.610232 ACTGCTGGACCATTTGGCTC 60.610 55.000 0.00 0.00 39.32 4.70
9198 12014 0.609957 CTGCTGGACCATTTGGCTCA 60.610 55.000 0.00 0.00 39.32 4.26
9199 12015 0.895100 TGCTGGACCATTTGGCTCAC 60.895 55.000 0.00 0.00 39.32 3.51
9200 12016 0.610232 GCTGGACCATTTGGCTCACT 60.610 55.000 0.00 0.00 39.32 3.41
9201 12017 1.915141 CTGGACCATTTGGCTCACTT 58.085 50.000 0.00 0.00 39.32 3.16
9202 12018 2.242043 CTGGACCATTTGGCTCACTTT 58.758 47.619 0.00 0.00 39.32 2.66
9203 12019 2.629617 CTGGACCATTTGGCTCACTTTT 59.370 45.455 0.00 0.00 39.32 2.27
9204 12020 3.037549 TGGACCATTTGGCTCACTTTTT 58.962 40.909 0.00 0.00 39.32 1.94
9205 12021 3.181467 TGGACCATTTGGCTCACTTTTTG 60.181 43.478 0.00 0.00 39.32 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.844420 GCGCTAGCATGAGGACTT 57.156 55.556 16.45 0.00 44.35 3.01
10 11 1.226688 TCACGTCAGATGCGCTAGC 60.227 57.895 9.73 4.06 45.41 3.42
11 12 0.179163 TGTCACGTCAGATGCGCTAG 60.179 55.000 9.73 0.00 0.00 3.42
12 13 0.242555 TTGTCACGTCAGATGCGCTA 59.757 50.000 9.73 0.00 0.00 4.26
13 14 0.390340 ATTGTCACGTCAGATGCGCT 60.390 50.000 9.73 0.00 0.00 5.92
14 15 0.443869 AATTGTCACGTCAGATGCGC 59.556 50.000 0.00 0.00 0.00 6.09
15 16 2.157474 TGAAATTGTCACGTCAGATGCG 59.843 45.455 0.00 0.00 0.00 4.73
16 17 3.425359 CCTGAAATTGTCACGTCAGATGC 60.425 47.826 4.48 0.00 39.94 3.91
17 18 3.996363 TCCTGAAATTGTCACGTCAGATG 59.004 43.478 4.48 0.00 39.94 2.90
18 19 3.997021 GTCCTGAAATTGTCACGTCAGAT 59.003 43.478 4.48 0.00 39.94 2.90
19 20 3.181470 TGTCCTGAAATTGTCACGTCAGA 60.181 43.478 4.48 0.00 39.94 3.27
20 21 3.130633 TGTCCTGAAATTGTCACGTCAG 58.869 45.455 0.00 0.00 37.77 3.51
21 22 3.186702 TGTCCTGAAATTGTCACGTCA 57.813 42.857 0.00 0.00 31.13 4.35
22 23 3.560068 ACTTGTCCTGAAATTGTCACGTC 59.440 43.478 0.00 0.00 31.13 4.34
23 24 3.541632 ACTTGTCCTGAAATTGTCACGT 58.458 40.909 0.00 0.00 31.13 4.49
24 25 3.058914 GGACTTGTCCTGAAATTGTCACG 60.059 47.826 12.20 0.00 31.13 4.35
25 26 3.882888 TGGACTTGTCCTGAAATTGTCAC 59.117 43.478 19.11 0.00 31.13 3.67
26 27 4.163441 TGGACTTGTCCTGAAATTGTCA 57.837 40.909 19.11 0.00 34.17 3.58
27 28 5.241506 TCAATGGACTTGTCCTGAAATTGTC 59.758 40.000 19.11 0.00 36.20 3.18
28 29 5.139727 TCAATGGACTTGTCCTGAAATTGT 58.860 37.500 19.11 0.00 36.20 2.71
29 30 5.710513 TCAATGGACTTGTCCTGAAATTG 57.289 39.130 19.11 18.12 36.20 2.32
30 31 5.244626 CCTTCAATGGACTTGTCCTGAAATT 59.755 40.000 19.11 8.80 36.20 1.82
31 32 4.768968 CCTTCAATGGACTTGTCCTGAAAT 59.231 41.667 19.11 3.38 36.20 2.17
32 33 4.141274 TCCTTCAATGGACTTGTCCTGAAA 60.141 41.667 19.11 6.69 36.20 2.69
33 34 3.394274 TCCTTCAATGGACTTGTCCTGAA 59.606 43.478 19.11 18.28 36.20 3.02
34 35 2.978978 TCCTTCAATGGACTTGTCCTGA 59.021 45.455 19.11 12.99 36.20 3.86
35 36 3.423539 TCCTTCAATGGACTTGTCCTG 57.576 47.619 19.11 11.07 36.20 3.86
36 37 5.779241 TTATCCTTCAATGGACTTGTCCT 57.221 39.130 19.11 4.09 39.17 3.85
37 38 5.888161 ACATTATCCTTCAATGGACTTGTCC 59.112 40.000 12.54 12.54 39.17 4.02
38 39 7.253422 CAACATTATCCTTCAATGGACTTGTC 58.747 38.462 0.00 0.00 39.17 3.18
39 40 6.153340 CCAACATTATCCTTCAATGGACTTGT 59.847 38.462 0.00 0.00 39.17 3.16
40 41 6.377996 TCCAACATTATCCTTCAATGGACTTG 59.622 38.462 0.00 0.00 39.17 3.16
41 42 6.493166 TCCAACATTATCCTTCAATGGACTT 58.507 36.000 0.00 0.00 39.17 3.01
42 43 6.069440 TCTCCAACATTATCCTTCAATGGACT 60.069 38.462 0.00 0.00 39.17 3.85
43 44 6.122277 TCTCCAACATTATCCTTCAATGGAC 58.878 40.000 0.00 0.00 39.17 4.02
44 45 6.325993 TCTCCAACATTATCCTTCAATGGA 57.674 37.500 0.00 0.00 37.64 3.41
45 46 6.516194 GCATCTCCAACATTATCCTTCAATGG 60.516 42.308 0.00 0.00 37.64 3.16
46 47 6.444633 GCATCTCCAACATTATCCTTCAATG 58.555 40.000 0.00 0.00 38.95 2.82
47 48 5.537674 GGCATCTCCAACATTATCCTTCAAT 59.462 40.000 0.00 0.00 34.01 2.57
48 49 4.889409 GGCATCTCCAACATTATCCTTCAA 59.111 41.667 0.00 0.00 34.01 2.69
95 96 2.028930 ACAACAGGTTGGTTCGCAAAAA 60.029 40.909 15.84 0.00 44.45 1.94
96 97 1.546476 ACAACAGGTTGGTTCGCAAAA 59.454 42.857 15.84 0.00 44.45 2.44
97 98 1.178276 ACAACAGGTTGGTTCGCAAA 58.822 45.000 15.84 0.00 44.45 3.68
98 99 1.178276 AACAACAGGTTGGTTCGCAA 58.822 45.000 15.84 0.00 44.45 4.85
99 100 2.875188 AACAACAGGTTGGTTCGCA 58.125 47.368 15.84 0.00 44.45 5.10
107 108 4.104102 TCTCTAACCATCCAACAACAGGTT 59.896 41.667 0.00 0.00 44.23 3.50
108 109 3.650942 TCTCTAACCATCCAACAACAGGT 59.349 43.478 0.00 0.00 0.00 4.00
109 110 4.020218 TCTCTCTAACCATCCAACAACAGG 60.020 45.833 0.00 0.00 0.00 4.00
110 111 4.932200 GTCTCTCTAACCATCCAACAACAG 59.068 45.833 0.00 0.00 0.00 3.16
111 112 4.593206 AGTCTCTCTAACCATCCAACAACA 59.407 41.667 0.00 0.00 0.00 3.33
112 113 4.932200 CAGTCTCTCTAACCATCCAACAAC 59.068 45.833 0.00 0.00 0.00 3.32
113 114 4.593206 ACAGTCTCTCTAACCATCCAACAA 59.407 41.667 0.00 0.00 0.00 2.83
114 115 4.021104 CACAGTCTCTCTAACCATCCAACA 60.021 45.833 0.00 0.00 0.00 3.33
115 116 4.499183 CACAGTCTCTCTAACCATCCAAC 58.501 47.826 0.00 0.00 0.00 3.77
116 117 3.515502 CCACAGTCTCTCTAACCATCCAA 59.484 47.826 0.00 0.00 0.00 3.53
117 118 3.099905 CCACAGTCTCTCTAACCATCCA 58.900 50.000 0.00 0.00 0.00 3.41
118 119 3.100671 ACCACAGTCTCTCTAACCATCC 58.899 50.000 0.00 0.00 0.00 3.51
119 120 5.394333 GGTTACCACAGTCTCTCTAACCATC 60.394 48.000 0.00 0.00 36.61 3.51
120 121 4.466726 GGTTACCACAGTCTCTCTAACCAT 59.533 45.833 0.00 0.00 36.61 3.55
121 122 3.830755 GGTTACCACAGTCTCTCTAACCA 59.169 47.826 0.00 0.00 36.61 3.67
122 123 3.195182 GGGTTACCACAGTCTCTCTAACC 59.805 52.174 2.98 0.00 36.50 2.85
123 124 3.830755 TGGGTTACCACAGTCTCTCTAAC 59.169 47.826 2.98 0.00 43.37 2.34
124 125 4.087182 CTGGGTTACCACAGTCTCTCTAA 58.913 47.826 2.98 0.00 43.37 2.10
125 126 3.698289 CTGGGTTACCACAGTCTCTCTA 58.302 50.000 2.98 0.00 43.37 2.43
126 127 2.530701 CTGGGTTACCACAGTCTCTCT 58.469 52.381 2.98 0.00 43.37 3.10
127 128 1.066787 GCTGGGTTACCACAGTCTCTC 60.067 57.143 17.00 2.01 43.37 3.20
128 129 0.977395 GCTGGGTTACCACAGTCTCT 59.023 55.000 17.00 0.00 43.37 3.10
129 130 0.036294 GGCTGGGTTACCACAGTCTC 60.036 60.000 17.00 7.52 43.37 3.36
130 131 1.489560 GGGCTGGGTTACCACAGTCT 61.490 60.000 18.75 0.00 43.37 3.24
131 132 1.002502 GGGCTGGGTTACCACAGTC 60.003 63.158 17.00 15.35 43.37 3.51
132 133 1.772567 TGGGCTGGGTTACCACAGT 60.773 57.895 17.00 0.00 43.37 3.55
133 134 3.166434 TGGGCTGGGTTACCACAG 58.834 61.111 13.23 13.23 43.37 3.66
136 137 2.450699 TGGTGGGCTGGGTTACCA 60.451 61.111 2.98 0.00 46.94 3.25
137 138 2.355115 CTGGTGGGCTGGGTTACC 59.645 66.667 0.00 0.00 37.24 2.85
138 139 2.355115 CCTGGTGGGCTGGGTTAC 59.645 66.667 0.00 0.00 0.00 2.50
148 149 2.230660 GAAAGACTTGAACCCTGGTGG 58.769 52.381 0.00 0.00 41.37 4.61
149 150 1.873591 CGAAAGACTTGAACCCTGGTG 59.126 52.381 0.00 0.00 0.00 4.17
150 151 1.202770 CCGAAAGACTTGAACCCTGGT 60.203 52.381 0.00 0.00 0.00 4.00
151 152 1.071699 TCCGAAAGACTTGAACCCTGG 59.928 52.381 0.00 0.00 0.00 4.45
152 153 2.417719 CTCCGAAAGACTTGAACCCTG 58.582 52.381 0.00 0.00 0.00 4.45
153 154 1.348036 CCTCCGAAAGACTTGAACCCT 59.652 52.381 0.00 0.00 0.00 4.34
154 155 1.071857 ACCTCCGAAAGACTTGAACCC 59.928 52.381 0.00 0.00 0.00 4.11
155 156 2.143925 CACCTCCGAAAGACTTGAACC 58.856 52.381 0.00 0.00 0.00 3.62
156 157 1.531578 GCACCTCCGAAAGACTTGAAC 59.468 52.381 0.00 0.00 0.00 3.18
157 158 1.416401 AGCACCTCCGAAAGACTTGAA 59.584 47.619 0.00 0.00 0.00 2.69
158 159 1.000955 GAGCACCTCCGAAAGACTTGA 59.999 52.381 0.00 0.00 0.00 3.02
159 160 1.270305 TGAGCACCTCCGAAAGACTTG 60.270 52.381 0.00 0.00 0.00 3.16
160 161 1.048601 TGAGCACCTCCGAAAGACTT 58.951 50.000 0.00 0.00 0.00 3.01
161 162 1.270907 ATGAGCACCTCCGAAAGACT 58.729 50.000 0.00 0.00 0.00 3.24
162 163 2.427453 TCTATGAGCACCTCCGAAAGAC 59.573 50.000 0.00 0.00 0.00 3.01
163 164 2.690497 CTCTATGAGCACCTCCGAAAGA 59.310 50.000 0.00 0.00 0.00 2.52
164 165 2.223923 CCTCTATGAGCACCTCCGAAAG 60.224 54.545 0.00 0.00 0.00 2.62
165 166 1.757118 CCTCTATGAGCACCTCCGAAA 59.243 52.381 0.00 0.00 0.00 3.46
166 167 1.342076 ACCTCTATGAGCACCTCCGAA 60.342 52.381 0.00 0.00 0.00 4.30
167 168 0.259065 ACCTCTATGAGCACCTCCGA 59.741 55.000 0.00 0.00 0.00 4.55
168 169 1.982660 TACCTCTATGAGCACCTCCG 58.017 55.000 0.00 0.00 0.00 4.63
169 170 3.235200 ACATACCTCTATGAGCACCTCC 58.765 50.000 0.00 0.00 34.77 4.30
170 171 4.100189 ACAACATACCTCTATGAGCACCTC 59.900 45.833 0.00 0.00 34.77 3.85
171 172 4.033709 ACAACATACCTCTATGAGCACCT 58.966 43.478 0.00 0.00 34.77 4.00
172 173 4.122776 CACAACATACCTCTATGAGCACC 58.877 47.826 0.00 0.00 34.77 5.01
173 174 3.557595 GCACAACATACCTCTATGAGCAC 59.442 47.826 0.00 0.00 34.77 4.40
174 175 3.737972 CGCACAACATACCTCTATGAGCA 60.738 47.826 0.00 0.00 34.77 4.26
175 176 2.797156 CGCACAACATACCTCTATGAGC 59.203 50.000 0.00 0.00 34.77 4.26
176 177 3.798878 CACGCACAACATACCTCTATGAG 59.201 47.826 0.00 0.00 34.77 2.90
177 178 3.780902 CACGCACAACATACCTCTATGA 58.219 45.455 0.00 0.00 34.77 2.15
178 179 2.285220 GCACGCACAACATACCTCTATG 59.715 50.000 0.00 0.00 36.54 2.23
179 180 2.550978 GCACGCACAACATACCTCTAT 58.449 47.619 0.00 0.00 0.00 1.98
180 181 1.734377 CGCACGCACAACATACCTCTA 60.734 52.381 0.00 0.00 0.00 2.43
181 182 1.014044 CGCACGCACAACATACCTCT 61.014 55.000 0.00 0.00 0.00 3.69
182 183 1.289109 ACGCACGCACAACATACCTC 61.289 55.000 0.00 0.00 0.00 3.85
183 184 1.301401 ACGCACGCACAACATACCT 60.301 52.632 0.00 0.00 0.00 3.08
184 185 1.154488 CACGCACGCACAACATACC 60.154 57.895 0.00 0.00 0.00 2.73
185 186 1.792057 GCACGCACGCACAACATAC 60.792 57.895 0.00 0.00 0.00 2.39
186 187 1.572956 ATGCACGCACGCACAACATA 61.573 50.000 0.00 0.00 46.56 2.29
187 188 2.405061 AATGCACGCACGCACAACAT 62.405 50.000 0.00 0.00 46.56 2.71
188 189 2.980317 GAATGCACGCACGCACAACA 62.980 55.000 0.00 0.00 46.56 3.33
189 190 2.353376 AATGCACGCACGCACAAC 60.353 55.556 0.00 0.00 46.56 3.32
190 191 2.051435 GAATGCACGCACGCACAA 60.051 55.556 0.00 0.00 46.56 3.33
191 192 1.294659 TATGAATGCACGCACGCACA 61.295 50.000 0.00 0.00 46.56 4.57
192 193 0.587242 CTATGAATGCACGCACGCAC 60.587 55.000 0.00 0.00 46.56 5.34
194 195 1.010797 CCTATGAATGCACGCACGC 60.011 57.895 0.00 0.00 0.00 5.34
195 196 1.643292 CCCTATGAATGCACGCACG 59.357 57.895 0.00 0.00 0.00 5.34
196 197 1.447317 CCCCCTATGAATGCACGCAC 61.447 60.000 0.00 0.00 0.00 5.34
197 198 1.152984 CCCCCTATGAATGCACGCA 60.153 57.895 0.00 0.00 0.00 5.24
198 199 1.152963 ACCCCCTATGAATGCACGC 60.153 57.895 0.00 0.00 0.00 5.34
199 200 0.180171 TCACCCCCTATGAATGCACG 59.820 55.000 0.00 0.00 0.00 5.34
200 201 1.212935 ACTCACCCCCTATGAATGCAC 59.787 52.381 0.00 0.00 0.00 4.57
201 202 1.212688 CACTCACCCCCTATGAATGCA 59.787 52.381 0.00 0.00 0.00 3.96
202 203 1.212935 ACACTCACCCCCTATGAATGC 59.787 52.381 0.00 0.00 26.18 3.56
203 204 4.645535 CATACACTCACCCCCTATGAATG 58.354 47.826 0.00 0.00 29.78 2.67
204 205 3.073062 GCATACACTCACCCCCTATGAAT 59.927 47.826 0.00 0.00 0.00 2.57
205 206 2.438021 GCATACACTCACCCCCTATGAA 59.562 50.000 0.00 0.00 0.00 2.57
206 207 2.047061 GCATACACTCACCCCCTATGA 58.953 52.381 0.00 0.00 0.00 2.15
207 208 1.768275 TGCATACACTCACCCCCTATG 59.232 52.381 0.00 0.00 0.00 2.23
208 209 1.768870 GTGCATACACTCACCCCCTAT 59.231 52.381 0.00 0.00 43.85 2.57
209 210 1.200519 GTGCATACACTCACCCCCTA 58.799 55.000 0.00 0.00 43.85 3.53
210 211 1.991230 GTGCATACACTCACCCCCT 59.009 57.895 0.00 0.00 43.85 4.79
211 212 4.637771 GTGCATACACTCACCCCC 57.362 61.111 0.00 0.00 43.85 5.40
219 220 4.376413 GCGCTCATATACAAGTGCATACAC 60.376 45.833 13.97 0.00 45.91 2.90
220 221 3.740832 GCGCTCATATACAAGTGCATACA 59.259 43.478 13.97 0.00 45.91 2.29
221 222 4.313522 GCGCTCATATACAAGTGCATAC 57.686 45.455 13.97 0.00 45.91 2.39
225 226 2.032549 CCAAGCGCTCATATACAAGTGC 60.033 50.000 12.06 11.85 46.76 4.40
226 227 2.545526 CCCAAGCGCTCATATACAAGTG 59.454 50.000 12.06 0.00 0.00 3.16
227 228 2.170607 ACCCAAGCGCTCATATACAAGT 59.829 45.455 12.06 0.00 0.00 3.16
228 229 2.802816 GACCCAAGCGCTCATATACAAG 59.197 50.000 12.06 0.00 0.00 3.16
229 230 2.434336 AGACCCAAGCGCTCATATACAA 59.566 45.455 12.06 0.00 0.00 2.41
230 231 2.039418 AGACCCAAGCGCTCATATACA 58.961 47.619 12.06 0.00 0.00 2.29
231 232 2.224066 ACAGACCCAAGCGCTCATATAC 60.224 50.000 12.06 1.00 0.00 1.47
232 233 2.039418 ACAGACCCAAGCGCTCATATA 58.961 47.619 12.06 0.00 0.00 0.86
233 234 0.833287 ACAGACCCAAGCGCTCATAT 59.167 50.000 12.06 0.00 0.00 1.78
234 235 0.108186 CACAGACCCAAGCGCTCATA 60.108 55.000 12.06 0.00 0.00 2.15
235 236 1.376424 CACAGACCCAAGCGCTCAT 60.376 57.895 12.06 0.00 0.00 2.90
236 237 2.031012 CACAGACCCAAGCGCTCA 59.969 61.111 12.06 0.00 0.00 4.26
237 238 0.320421 TAACACAGACCCAAGCGCTC 60.320 55.000 12.06 0.00 0.00 5.03
238 239 0.324943 ATAACACAGACCCAAGCGCT 59.675 50.000 2.64 2.64 0.00 5.92
239 240 0.447801 CATAACACAGACCCAAGCGC 59.552 55.000 0.00 0.00 0.00 5.92
240 241 1.808411 ACATAACACAGACCCAAGCG 58.192 50.000 0.00 0.00 0.00 4.68
241 242 3.146066 TGAACATAACACAGACCCAAGC 58.854 45.455 0.00 0.00 0.00 4.01
242 243 5.766150 TTTGAACATAACACAGACCCAAG 57.234 39.130 0.00 0.00 0.00 3.61
243 244 6.531503 TTTTTGAACATAACACAGACCCAA 57.468 33.333 0.00 0.00 0.00 4.12
244 245 6.097554 ACATTTTTGAACATAACACAGACCCA 59.902 34.615 0.00 0.00 0.00 4.51
245 246 6.512297 ACATTTTTGAACATAACACAGACCC 58.488 36.000 0.00 0.00 0.00 4.46
246 247 8.419076 AAACATTTTTGAACATAACACAGACC 57.581 30.769 0.00 0.00 0.00 3.85
263 264 9.855021 CTATATTTCCCTCGACAAAAACATTTT 57.145 29.630 0.00 0.00 0.00 1.82
264 265 9.020731 ACTATATTTCCCTCGACAAAAACATTT 57.979 29.630 0.00 0.00 0.00 2.32
274 275 5.981915 AGCGTTTAACTATATTTCCCTCGAC 59.018 40.000 0.00 0.00 0.00 4.20
275 276 6.152932 AGCGTTTAACTATATTTCCCTCGA 57.847 37.500 0.00 0.00 0.00 4.04
309 320 0.179124 CTCCTGCTCGTGCTCCTTAC 60.179 60.000 11.19 0.00 40.48 2.34
499 513 4.141801 CCGACTAGGAGAGAGAGAGAGAAA 60.142 50.000 0.00 0.00 45.00 2.52
500 514 3.386726 CCGACTAGGAGAGAGAGAGAGAA 59.613 52.174 0.00 0.00 45.00 2.87
548 2242 2.222027 CTGCTAATCCCCAACCGATTC 58.778 52.381 0.00 0.00 32.32 2.52
977 3104 0.902531 TCCGCTCTTCCCTTTCGATT 59.097 50.000 0.00 0.00 0.00 3.34
982 3109 4.200092 GACATAAATCCGCTCTTCCCTTT 58.800 43.478 0.00 0.00 0.00 3.11
1134 3261 2.911143 CGGTTGGATGAGAGGGGG 59.089 66.667 0.00 0.00 0.00 5.40
1203 3330 5.787380 TCCGTCATCATAGGATCAAATCAG 58.213 41.667 0.00 0.00 0.00 2.90
1396 3523 3.499737 GGAACATGGACAGGCGCG 61.500 66.667 0.00 0.00 0.00 6.86
1452 3579 1.241165 CAACACAGCAGAATGGAGCA 58.759 50.000 0.00 0.00 35.86 4.26
1454 3581 2.606308 GCAACAACACAGCAGAATGGAG 60.606 50.000 0.00 0.00 35.86 3.86
1455 3582 1.337703 GCAACAACACAGCAGAATGGA 59.662 47.619 0.00 0.00 35.86 3.41
1584 3711 7.176690 GGGTATATATGTTGGATTTTCACTGGG 59.823 40.741 0.00 0.00 0.00 4.45
1735 3864 5.104982 TGGTCACAGCACATATTAGTCATCA 60.105 40.000 0.00 0.00 0.00 3.07
1745 3874 1.740043 CGCAGATGGTCACAGCACATA 60.740 52.381 0.00 0.00 34.87 2.29
1783 3912 4.819105 ATCCGAACAATGACCTACAGAA 57.181 40.909 0.00 0.00 0.00 3.02
1787 3916 6.039047 TGTCTACTATCCGAACAATGACCTAC 59.961 42.308 0.00 0.00 0.00 3.18
1823 3952 0.602905 GCAGAACGTTACCAGGCAGT 60.603 55.000 0.00 0.00 0.00 4.40
1824 3953 0.320771 AGCAGAACGTTACCAGGCAG 60.321 55.000 0.00 0.00 0.00 4.85
1874 4006 7.178983 TGCAAGTTAAATCCCTTTGATGATTCT 59.821 33.333 0.00 0.00 32.68 2.40
1946 4078 4.335416 CAAGCTGGAAAAGATAGGGAACA 58.665 43.478 0.00 0.00 0.00 3.18
2157 4289 5.363939 ACCTCTAAAGAACAGCTATGCATC 58.636 41.667 0.19 0.00 0.00 3.91
2180 4312 5.580691 CGTTACATCCAGCAAAGATTGACTA 59.419 40.000 0.00 0.00 0.00 2.59
2188 4320 3.003275 ACAACACGTTACATCCAGCAAAG 59.997 43.478 0.00 0.00 0.00 2.77
2202 4334 6.801575 ACAAAGATAATTTTCCACAACACGT 58.198 32.000 0.00 0.00 0.00 4.49
2207 4339 7.925483 CACAGGAACAAAGATAATTTTCCACAA 59.075 33.333 5.78 0.00 38.60 3.33
2211 4343 9.710900 AATTCACAGGAACAAAGATAATTTTCC 57.289 29.630 0.00 0.00 35.46 3.13
2241 4373 5.514274 TTGTTTAAAGGCTCCAGAAACTG 57.486 39.130 12.01 0.00 32.47 3.16
2303 4435 9.841295 AAATGTTGAAACCTAACAAGACTACTA 57.159 29.630 0.00 0.00 40.95 1.82
2304 4436 8.621286 CAAATGTTGAAACCTAACAAGACTACT 58.379 33.333 0.00 0.00 40.95 2.57
2483 4687 3.285215 GGGGATGATGCTGCTGCG 61.285 66.667 11.21 0.00 43.34 5.18
2532 4736 3.446570 GTGGGATGGTGCTGCTGC 61.447 66.667 8.89 8.89 40.20 5.25
2533 4737 3.129502 CGTGGGATGGTGCTGCTG 61.130 66.667 0.00 0.00 0.00 4.41
2578 4782 4.146058 CAGTGGTTGCTGCTGTGA 57.854 55.556 0.00 0.00 0.00 3.58
2637 4841 2.158667 AGTGTTCAGGGTGTTAGGTTGG 60.159 50.000 0.00 0.00 0.00 3.77
2643 4847 4.431416 AACATGAGTGTTCAGGGTGTTA 57.569 40.909 0.00 0.00 45.14 2.41
2695 4899 5.119743 GTGCAAAATTCTGAATTGAAGGAGC 59.880 40.000 15.80 13.07 0.00 4.70
2727 4931 3.307480 CCGGTAAAGATTGAACAGAGGGT 60.307 47.826 0.00 0.00 0.00 4.34
2740 4944 0.991355 ATGCCCATCCCCGGTAAAGA 60.991 55.000 0.00 0.00 0.00 2.52
2783 4987 5.514274 AAACTGTAATGGGACTGTTTGTG 57.486 39.130 9.76 0.00 44.73 3.33
2845 5049 1.039233 CCAGGCAATCCCATGGACAC 61.039 60.000 15.22 0.00 35.24 3.67
2848 5052 1.307309 CACCAGGCAATCCCATGGA 59.693 57.895 15.22 0.00 36.18 3.41
2977 5181 0.257039 CCCAGTTGAGGAGGGATTGG 59.743 60.000 0.00 0.00 45.80 3.16
3019 5223 2.354103 GCTGTTGCTGAGGATACTGTGA 60.354 50.000 0.00 0.00 41.79 3.58
3096 5300 5.221048 CCCAAGAACCACTTCTTTGTTAGTG 60.221 44.000 0.00 0.00 43.10 2.74
3114 5318 4.344865 GGTGAAGGCCGCCCAAGA 62.345 66.667 5.55 0.00 39.55 3.02
3177 5381 8.591072 TGTGGATTAGTATAGTAAACCATAGGC 58.409 37.037 24.33 15.55 37.24 3.93
3228 5432 1.556564 CAGTGCCGGAGTAATACGTG 58.443 55.000 5.05 0.00 0.00 4.49
3283 5487 1.065126 AGCTTGAGTGGCAGGATAACC 60.065 52.381 0.00 0.00 0.00 2.85
3318 5522 8.956426 GTATTTGACATAGAAGGGTTCATGAAA 58.044 33.333 10.35 0.00 0.00 2.69
3330 5534 5.880332 GGCAGGAACAGTATTTGACATAGAA 59.120 40.000 0.00 0.00 0.00 2.10
3385 5589 0.987294 AGTTGGGACTGACCAGATGG 59.013 55.000 3.76 0.00 42.47 3.51
3486 5690 1.327764 GCGACCCTGAATTTAGAAGCG 59.672 52.381 0.00 0.74 0.00 4.68
3581 5785 0.322975 TGCCTTGCTCTCCTTCTCAC 59.677 55.000 0.00 0.00 0.00 3.51
3594 5798 1.770658 TCTGGGATAGATGGTGCCTTG 59.229 52.381 0.00 0.00 0.00 3.61
3621 5825 3.486383 TGGTGCTTTACTTTCCTTGGAG 58.514 45.455 0.00 0.00 0.00 3.86
3667 5871 0.672711 GGTAAGGGTTGAGTCACCGC 60.673 60.000 0.00 0.00 37.76 5.68
3780 5993 9.436957 TTCTTGTTATCCTTAAGTGAATCAGTC 57.563 33.333 0.97 0.00 0.00 3.51
3946 6589 2.927856 TTCGGCAGGGGAAGCAGA 60.928 61.111 0.00 0.00 34.46 4.26
3991 6634 2.489329 GACCAACCACATCATCACCAAG 59.511 50.000 0.00 0.00 0.00 3.61
3996 6639 2.947127 TGTGACCAACCACATCATCA 57.053 45.000 0.00 0.00 41.63 3.07
4023 6666 4.932200 ACCTTTTCACTATCGAAGCTCTTG 59.068 41.667 0.00 0.00 0.00 3.02
4042 6685 3.165071 CCTTGCTGGTTAAATCCACCTT 58.835 45.455 0.00 0.00 35.07 3.50
4064 6707 3.888323 TGTTGCTGATGTTAAGCCTGAAA 59.112 39.130 0.00 0.00 40.06 2.69
4074 6717 6.000219 ACTACTTTCAGATGTTGCTGATGTT 59.000 36.000 0.00 0.00 43.84 2.71
4170 6813 8.323140 CGCAATTCATTGATTCTTTCATTAACC 58.677 33.333 3.60 0.00 40.14 2.85
4185 6828 8.277713 AGAAAATCAAAAAGACGCAATTCATTG 58.722 29.630 0.00 0.00 40.66 2.82
4186 6829 8.369218 AGAAAATCAAAAAGACGCAATTCATT 57.631 26.923 0.00 0.00 0.00 2.57
4195 6838 9.833894 CAAACATGTTAGAAAATCAAAAAGACG 57.166 29.630 12.39 0.00 0.00 4.18
4203 6848 6.147492 GGCAATGCAAACATGTTAGAAAATCA 59.853 34.615 12.39 3.08 36.36 2.57
4374 7019 7.341256 AGAATCAGACATAATTTTGCCATCACT 59.659 33.333 0.00 0.00 0.00 3.41
4415 7060 1.048601 AGTCCACCGTGAAGTCATGT 58.951 50.000 0.00 0.00 0.00 3.21
4423 7068 2.099652 CTCAGCCAAGTCCACCGTGA 62.100 60.000 0.00 0.00 0.00 4.35
4426 7071 2.743928 GCTCAGCCAAGTCCACCG 60.744 66.667 0.00 0.00 0.00 4.94
4583 7228 4.761739 TCCACAGAAGCTGATAAAGTTTGG 59.238 41.667 0.00 0.00 35.18 3.28
4584 7229 5.947228 TCCACAGAAGCTGATAAAGTTTG 57.053 39.130 0.00 0.00 35.18 2.93
4612 7257 2.015736 ATTGACCTCAGACACATCGC 57.984 50.000 0.00 0.00 0.00 4.58
4627 7272 4.533707 ACTCTGATGAGGTTCCAGAATTGA 59.466 41.667 0.00 0.00 44.29 2.57
4665 7310 7.868415 GCTACTTCTGATATCTTTATCGTTGGT 59.132 37.037 3.98 0.00 37.61 3.67
4670 7315 9.631452 TGAATGCTACTTCTGATATCTTTATCG 57.369 33.333 3.98 0.00 37.61 2.92
4703 7348 7.195374 AGTAATACCAGAAACAGCTAATCCA 57.805 36.000 0.00 0.00 0.00 3.41
4718 7363 3.884895 CAACATGCCAGGAGTAATACCA 58.115 45.455 0.00 0.00 0.00 3.25
4775 7420 1.089112 TCGCTCCATCTGCATGTTTG 58.911 50.000 0.00 0.00 0.00 2.93
4805 7450 3.676049 CGGCACTTGATTGCTCAGTACTA 60.676 47.826 0.00 0.00 42.56 1.82
4808 7453 1.001974 ACGGCACTTGATTGCTCAGTA 59.998 47.619 0.00 0.00 42.56 2.74
4881 7526 0.796927 GCTGTAGACTTTGTTCGGGC 59.203 55.000 0.00 0.00 0.00 6.13
4896 7541 3.481453 GTTTCTTCTTTCTCCCAGCTGT 58.519 45.455 13.81 0.00 0.00 4.40
4954 7599 5.052481 TGTATGCATTGTACAGATCTGAGC 58.948 41.667 29.27 19.41 0.00 4.26
4964 7609 4.457603 TGTGGTCCTTTGTATGCATTGTAC 59.542 41.667 3.54 0.00 0.00 2.90
5018 7663 3.325870 TGTTGAAGAACTATCAGCACCG 58.674 45.455 0.00 0.00 33.81 4.94
5083 7728 1.555967 TCCATCGTCCTCACACATCA 58.444 50.000 0.00 0.00 0.00 3.07
5261 7906 9.371136 CTAGAATACTGATGTGCAAAAGTTAGA 57.629 33.333 0.00 0.00 0.00 2.10
5550 8195 2.479566 TTCCTCAGAACACCATGAGC 57.520 50.000 0.00 0.00 41.33 4.26
5562 8207 1.021390 GCACCACGTGGATTCCTCAG 61.021 60.000 40.21 18.23 38.94 3.35
5846 8491 5.014123 TGAAATCACCCCAGTAAGAGTTGAT 59.986 40.000 0.00 0.00 0.00 2.57
5948 8593 1.902508 TCCTCACTAAAGTCTGGCAGG 59.097 52.381 15.73 0.00 0.00 4.85
6032 8677 4.040217 TCTGCTTCAGCTTCTTCTCTTTCT 59.960 41.667 0.00 0.00 42.66 2.52
6149 8794 9.918630 CTCTTTTTGTACAATTCTCCAATCAAT 57.081 29.630 9.56 0.00 0.00 2.57
6180 8825 2.092374 GCATGATGCGCTCTGTCAA 58.908 52.632 9.73 0.00 31.71 3.18
6356 9001 4.698575 GGGAAGATATCAGTTGACTGGTC 58.301 47.826 10.97 7.41 43.91 4.02
6464 9109 1.065199 GCATCCCTGTGAACCTCATCA 60.065 52.381 0.00 0.00 0.00 3.07
6710 9361 4.499183 CAAGAGTGATAGCTTCGTCCTTT 58.501 43.478 0.00 0.00 0.00 3.11
6828 9479 7.349859 AGAATTGTACCCATTAGGACCAGATAA 59.650 37.037 0.00 0.00 39.89 1.75
6995 9646 5.963253 AGATTTCTCTCTCAATTCCTCCTCA 59.037 40.000 0.00 0.00 0.00 3.86
7052 9703 9.350357 CTTATGCGAACACTTAGTTAGAAAGTA 57.650 33.333 0.00 0.00 41.51 2.24
7053 9704 8.086522 TCTTATGCGAACACTTAGTTAGAAAGT 58.913 33.333 0.00 0.00 41.51 2.66
7071 9722 6.132056 GTGTGCTGAAGAAATATCTTATGCG 58.868 40.000 9.24 0.00 45.91 4.73
7073 9724 7.281774 AGGTGTGTGCTGAAGAAATATCTTATG 59.718 37.037 0.00 0.00 45.91 1.90
7075 9726 6.595326 CAGGTGTGTGCTGAAGAAATATCTTA 59.405 38.462 0.00 0.00 45.91 2.10
7185 9836 8.969267 GCCGATAGTAGCACATTATTATCATAC 58.031 37.037 0.00 0.00 0.00 2.39
7186 9962 8.691797 TGCCGATAGTAGCACATTATTATCATA 58.308 33.333 0.00 0.00 33.08 2.15
7235 10011 2.813907 ACTCCATAGTCTCACAGCAGT 58.186 47.619 0.00 0.00 0.00 4.40
7250 10026 8.946085 GTCTAATAACAACAAATCATGACTCCA 58.054 33.333 0.00 0.00 0.00 3.86
7253 10029 9.950496 AGAGTCTAATAACAACAAATCATGACT 57.050 29.630 0.00 0.00 33.38 3.41
7270 10046 5.887035 AGGCACGAAGTACTAAGAGTCTAAT 59.113 40.000 0.00 0.00 41.61 1.73
7289 10065 5.687285 CACAACAATAAACTCTGAAAGGCAC 59.313 40.000 0.00 0.00 0.00 5.01
7291 10067 6.072112 TCACAACAATAAACTCTGAAAGGC 57.928 37.500 0.00 0.00 0.00 4.35
7299 10099 7.855904 ACACGAGAATTTCACAACAATAAACTC 59.144 33.333 0.00 0.00 0.00 3.01
7326 10126 2.223618 TGGCAAAAAGTTACCAACTCGC 60.224 45.455 0.00 0.00 41.91 5.03
7331 10131 3.108376 ACCCTTGGCAAAAAGTTACCAA 58.892 40.909 0.00 0.00 39.81 3.67
7333 10133 2.036733 GGACCCTTGGCAAAAAGTTACC 59.963 50.000 0.00 0.00 0.00 2.85
7509 10318 2.438021 ACAGAGGCCACTAGTCAACAAA 59.562 45.455 5.01 0.00 0.00 2.83
7517 10326 3.999663 CAGAAGAAAACAGAGGCCACTAG 59.000 47.826 5.01 1.55 0.00 2.57
7755 10566 7.039784 GGCTTGCTCAATAAATTATATCCACCA 60.040 37.037 0.00 0.00 0.00 4.17
7803 10614 1.608801 GGCAAATGCAAGGACAAAGGG 60.609 52.381 7.80 0.00 44.36 3.95
7840 10651 1.461127 GTCAAAGTTAGCCAGCACTCG 59.539 52.381 0.00 0.00 0.00 4.18
7852 10663 7.232534 TGAAAGCCTACAAATATGGTCAAAGTT 59.767 33.333 0.00 0.00 0.00 2.66
7881 10692 2.426522 TCCTCCAATGAAGCAAGAACG 58.573 47.619 0.00 0.00 0.00 3.95
7899 10710 4.679373 TGGAGAATCACTTAGAGCATCC 57.321 45.455 0.00 0.00 36.25 3.51
7944 10755 2.426738 CACCACAAACCTTGCAAGAAGA 59.573 45.455 28.05 0.00 0.00 2.87
8067 10878 0.247460 TGATCCACTCCAAGACTGCG 59.753 55.000 0.00 0.00 0.00 5.18
8087 10898 3.458044 AGGAATCCCCCTTTTCTGTTC 57.542 47.619 0.00 0.00 30.99 3.18
8292 11103 8.867935 CATGCATGTACTCTAGCTGATTATTAC 58.132 37.037 18.91 0.00 0.00 1.89
8418 11229 0.539438 TGGGTGCAAAGACATGGGAC 60.539 55.000 0.00 0.00 0.00 4.46
8545 11356 6.873997 TCAACAGTAGAACGGAATACATCAT 58.126 36.000 0.00 0.00 0.00 2.45
8546 11357 6.152154 TCTCAACAGTAGAACGGAATACATCA 59.848 38.462 0.00 0.00 0.00 3.07
8547 11358 6.472808 GTCTCAACAGTAGAACGGAATACATC 59.527 42.308 0.00 0.00 0.00 3.06
8589 11400 3.190327 CAGTGTCCATCCGCAACAATAAA 59.810 43.478 0.00 0.00 0.00 1.40
8630 11441 1.666189 GGAGCCAACTCGAAATAGCAC 59.334 52.381 0.00 0.00 44.48 4.40
8657 11468 4.935205 TCACAAAATATTCCCAGACAGACG 59.065 41.667 0.00 0.00 0.00 4.18
8901 11714 2.951745 CCAAGCTAGACGCGCGAG 60.952 66.667 39.36 24.72 45.59 5.03
8902 11715 3.277211 AACCAAGCTAGACGCGCGA 62.277 57.895 39.36 14.09 45.59 5.87
8903 11716 2.809601 AACCAAGCTAGACGCGCG 60.810 61.111 30.96 30.96 45.59 6.86
8906 11719 2.778679 CGCAACCAAGCTAGACGC 59.221 61.111 0.00 0.00 39.57 5.19
8914 11729 1.856265 GAAGGGAGTGCGCAACCAAG 61.856 60.000 27.84 0.00 0.00 3.61
8919 11734 1.148273 AACAGAAGGGAGTGCGCAA 59.852 52.632 14.00 0.00 0.00 4.85
8925 11740 4.503714 TTGAGAAACAACAGAAGGGAGT 57.496 40.909 0.00 0.00 33.18 3.85
8949 11765 2.168326 TCACATGCGAGAAGAAAGCA 57.832 45.000 0.00 0.00 45.46 3.91
8950 11766 3.048942 CATCACATGCGAGAAGAAAGC 57.951 47.619 0.00 0.00 0.00 3.51
8964 11780 9.851686 AAGACTTATATTTAGGAATGCATCACA 57.148 29.630 0.00 0.00 0.00 3.58
8992 11808 9.190858 GCATGTAGTCTATAGTGAAATCTCTTG 57.809 37.037 0.00 0.00 0.00 3.02
8993 11809 8.079203 CGCATGTAGTCTATAGTGAAATCTCTT 58.921 37.037 0.00 0.00 0.00 2.85
8994 11810 7.308891 CCGCATGTAGTCTATAGTGAAATCTCT 60.309 40.741 0.00 0.00 0.00 3.10
8995 11811 6.804295 CCGCATGTAGTCTATAGTGAAATCTC 59.196 42.308 0.00 0.00 0.00 2.75
8996 11812 6.490381 TCCGCATGTAGTCTATAGTGAAATCT 59.510 38.462 0.00 0.00 0.00 2.40
8997 11813 6.678878 TCCGCATGTAGTCTATAGTGAAATC 58.321 40.000 0.00 0.00 0.00 2.17
8998 11814 6.650427 TCCGCATGTAGTCTATAGTGAAAT 57.350 37.500 0.00 0.00 0.00 2.17
8999 11815 5.507482 GCTCCGCATGTAGTCTATAGTGAAA 60.507 44.000 0.00 0.00 0.00 2.69
9000 11816 4.023107 GCTCCGCATGTAGTCTATAGTGAA 60.023 45.833 0.00 0.00 0.00 3.18
9001 11817 3.502595 GCTCCGCATGTAGTCTATAGTGA 59.497 47.826 0.00 0.00 0.00 3.41
9002 11818 3.253432 TGCTCCGCATGTAGTCTATAGTG 59.747 47.826 0.00 0.00 31.71 2.74
9003 11819 3.487372 TGCTCCGCATGTAGTCTATAGT 58.513 45.455 0.00 0.00 31.71 2.12
9004 11820 4.505313 TTGCTCCGCATGTAGTCTATAG 57.495 45.455 0.00 0.00 38.76 1.31
9005 11821 4.929819 TTTGCTCCGCATGTAGTCTATA 57.070 40.909 0.00 0.00 38.76 1.31
9006 11822 3.819564 TTTGCTCCGCATGTAGTCTAT 57.180 42.857 0.00 0.00 38.76 1.98
9007 11823 3.603158 TTTTGCTCCGCATGTAGTCTA 57.397 42.857 0.00 0.00 38.76 2.59
9008 11824 2.472695 TTTTGCTCCGCATGTAGTCT 57.527 45.000 0.00 0.00 38.76 3.24
9009 11825 2.677836 TCATTTTGCTCCGCATGTAGTC 59.322 45.455 0.00 0.00 38.76 2.59
9010 11826 2.679837 CTCATTTTGCTCCGCATGTAGT 59.320 45.455 0.00 0.00 38.76 2.73
9011 11827 2.679837 ACTCATTTTGCTCCGCATGTAG 59.320 45.455 0.00 0.00 38.76 2.74
9012 11828 2.419673 CACTCATTTTGCTCCGCATGTA 59.580 45.455 0.00 0.00 38.76 2.29
9013 11829 1.200716 CACTCATTTTGCTCCGCATGT 59.799 47.619 0.00 0.00 38.76 3.21
9014 11830 1.468565 CCACTCATTTTGCTCCGCATG 60.469 52.381 0.00 0.00 38.76 4.06
9015 11831 0.813184 CCACTCATTTTGCTCCGCAT 59.187 50.000 0.00 0.00 38.76 4.73
9016 11832 1.865788 GCCACTCATTTTGCTCCGCA 61.866 55.000 0.00 0.00 36.47 5.69
9017 11833 1.153958 GCCACTCATTTTGCTCCGC 60.154 57.895 0.00 0.00 0.00 5.54
9018 11834 0.883833 AAGCCACTCATTTTGCTCCG 59.116 50.000 0.00 0.00 32.62 4.63
9019 11835 4.884164 AGTATAAGCCACTCATTTTGCTCC 59.116 41.667 0.00 0.00 32.62 4.70
9020 11836 6.442513 AAGTATAAGCCACTCATTTTGCTC 57.557 37.500 0.00 0.00 32.62 4.26
9021 11837 6.840780 AAAGTATAAGCCACTCATTTTGCT 57.159 33.333 0.00 0.00 35.08 3.91
9022 11838 8.980143 TTTAAAGTATAAGCCACTCATTTTGC 57.020 30.769 0.00 0.00 0.00 3.68
9025 11841 8.251026 GCCTTTTAAAGTATAAGCCACTCATTT 58.749 33.333 3.91 0.00 0.00 2.32
9026 11842 7.415206 CGCCTTTTAAAGTATAAGCCACTCATT 60.415 37.037 3.91 0.00 0.00 2.57
9027 11843 6.038271 CGCCTTTTAAAGTATAAGCCACTCAT 59.962 38.462 3.91 0.00 0.00 2.90
9028 11844 5.353123 CGCCTTTTAAAGTATAAGCCACTCA 59.647 40.000 3.91 0.00 0.00 3.41
9029 11845 5.353400 ACGCCTTTTAAAGTATAAGCCACTC 59.647 40.000 3.91 0.00 0.00 3.51
9030 11846 5.250982 ACGCCTTTTAAAGTATAAGCCACT 58.749 37.500 3.91 0.00 0.00 4.00
9031 11847 5.353400 AGACGCCTTTTAAAGTATAAGCCAC 59.647 40.000 3.91 0.00 0.00 5.01
9032 11848 5.493809 AGACGCCTTTTAAAGTATAAGCCA 58.506 37.500 3.91 0.00 0.00 4.75
9033 11849 7.725818 ATAGACGCCTTTTAAAGTATAAGCC 57.274 36.000 3.91 0.00 0.00 4.35
9040 11856 9.477484 CAGATGTATATAGACGCCTTTTAAAGT 57.523 33.333 3.91 0.00 0.00 2.66
9041 11857 9.692749 TCAGATGTATATAGACGCCTTTTAAAG 57.307 33.333 0.00 0.00 0.00 1.85
9044 11860 9.639601 CATTCAGATGTATATAGACGCCTTTTA 57.360 33.333 0.00 0.00 0.00 1.52
9045 11861 8.150945 ACATTCAGATGTATATAGACGCCTTTT 58.849 33.333 0.00 0.00 44.51 2.27
9046 11862 7.671302 ACATTCAGATGTATATAGACGCCTTT 58.329 34.615 0.00 0.00 44.51 3.11
9047 11863 7.233389 ACATTCAGATGTATATAGACGCCTT 57.767 36.000 0.00 0.00 44.51 4.35
9048 11864 6.842437 ACATTCAGATGTATATAGACGCCT 57.158 37.500 0.00 0.00 44.51 5.52
9049 11865 7.763356 ACTACATTCAGATGTATATAGACGCC 58.237 38.462 0.23 0.00 45.20 5.68
9050 11866 9.627395 AAACTACATTCAGATGTATATAGACGC 57.373 33.333 0.23 0.00 45.20 5.19
9058 11874 9.809096 CACTGTAGAAACTACATTCAGATGTAT 57.191 33.333 11.21 0.00 45.20 2.29
9059 11875 8.251026 CCACTGTAGAAACTACATTCAGATGTA 58.749 37.037 11.21 0.00 44.51 2.29
9061 11877 7.323420 TCCACTGTAGAAACTACATTCAGATG 58.677 38.462 11.21 2.49 39.25 2.90
9062 11878 7.482169 TCCACTGTAGAAACTACATTCAGAT 57.518 36.000 11.21 0.00 0.00 2.90
9063 11879 6.911250 TCCACTGTAGAAACTACATTCAGA 57.089 37.500 11.21 5.10 0.00 3.27
9064 11880 8.037758 AGATTCCACTGTAGAAACTACATTCAG 58.962 37.037 11.21 3.96 0.00 3.02
9065 11881 7.907389 AGATTCCACTGTAGAAACTACATTCA 58.093 34.615 11.21 0.00 0.00 2.57
9066 11882 8.254508 AGAGATTCCACTGTAGAAACTACATTC 58.745 37.037 11.21 4.19 0.00 2.67
9067 11883 8.140112 AGAGATTCCACTGTAGAAACTACATT 57.860 34.615 11.21 4.43 0.00 2.71
9068 11884 7.726033 AGAGATTCCACTGTAGAAACTACAT 57.274 36.000 11.21 0.00 0.00 2.29
9069 11885 8.645814 TTAGAGATTCCACTGTAGAAACTACA 57.354 34.615 10.49 10.49 0.00 2.74
9070 11886 9.924650 TTTTAGAGATTCCACTGTAGAAACTAC 57.075 33.333 0.00 0.00 0.00 2.73
9072 11888 9.495572 CTTTTTAGAGATTCCACTGTAGAAACT 57.504 33.333 0.00 0.00 0.00 2.66
9073 11889 9.490379 TCTTTTTAGAGATTCCACTGTAGAAAC 57.510 33.333 0.00 0.00 0.00 2.78
9074 11890 9.490379 GTCTTTTTAGAGATTCCACTGTAGAAA 57.510 33.333 0.00 0.00 0.00 2.52
9075 11891 8.871125 AGTCTTTTTAGAGATTCCACTGTAGAA 58.129 33.333 0.00 0.00 0.00 2.10
9076 11892 8.423906 AGTCTTTTTAGAGATTCCACTGTAGA 57.576 34.615 0.00 0.00 0.00 2.59
9094 11910 9.355916 GCCTCCATTCCTAAATATAAGTCTTTT 57.644 33.333 0.00 0.00 0.00 2.27
9095 11911 8.502738 TGCCTCCATTCCTAAATATAAGTCTTT 58.497 33.333 0.00 0.00 0.00 2.52
9096 11912 8.045720 TGCCTCCATTCCTAAATATAAGTCTT 57.954 34.615 0.00 0.00 0.00 3.01
9097 11913 7.293535 ACTGCCTCCATTCCTAAATATAAGTCT 59.706 37.037 0.00 0.00 0.00 3.24
9098 11914 7.454225 ACTGCCTCCATTCCTAAATATAAGTC 58.546 38.462 0.00 0.00 0.00 3.01
9099 11915 7.394144 ACTGCCTCCATTCCTAAATATAAGT 57.606 36.000 0.00 0.00 0.00 2.24
9103 11919 9.062367 ACATATACTGCCTCCATTCCTAAATAT 57.938 33.333 0.00 0.00 0.00 1.28
9104 11920 8.321353 CACATATACTGCCTCCATTCCTAAATA 58.679 37.037 0.00 0.00 0.00 1.40
9105 11921 7.017551 TCACATATACTGCCTCCATTCCTAAAT 59.982 37.037 0.00 0.00 0.00 1.40
9106 11922 6.328934 TCACATATACTGCCTCCATTCCTAAA 59.671 38.462 0.00 0.00 0.00 1.85
9107 11923 5.843969 TCACATATACTGCCTCCATTCCTAA 59.156 40.000 0.00 0.00 0.00 2.69
9108 11924 5.402630 TCACATATACTGCCTCCATTCCTA 58.597 41.667 0.00 0.00 0.00 2.94
9109 11925 4.234550 TCACATATACTGCCTCCATTCCT 58.765 43.478 0.00 0.00 0.00 3.36
9110 11926 4.623932 TCACATATACTGCCTCCATTCC 57.376 45.455 0.00 0.00 0.00 3.01
9111 11927 8.621532 TTTTATCACATATACTGCCTCCATTC 57.378 34.615 0.00 0.00 0.00 2.67
9112 11928 8.995027 TTTTTATCACATATACTGCCTCCATT 57.005 30.769 0.00 0.00 0.00 3.16
9157 11973 6.761242 GCAGTCCCAAGTTCTTATTTGTTTTT 59.239 34.615 0.00 0.00 0.00 1.94
9158 11974 6.098266 AGCAGTCCCAAGTTCTTATTTGTTTT 59.902 34.615 0.00 0.00 0.00 2.43
9159 11975 5.598417 AGCAGTCCCAAGTTCTTATTTGTTT 59.402 36.000 0.00 0.00 0.00 2.83
9160 11976 5.010012 CAGCAGTCCCAAGTTCTTATTTGTT 59.990 40.000 0.00 0.00 0.00 2.83
9161 11977 4.520492 CAGCAGTCCCAAGTTCTTATTTGT 59.480 41.667 0.00 0.00 0.00 2.83
9162 11978 4.082571 CCAGCAGTCCCAAGTTCTTATTTG 60.083 45.833 0.00 0.00 0.00 2.32
9163 11979 4.082125 CCAGCAGTCCCAAGTTCTTATTT 58.918 43.478 0.00 0.00 0.00 1.40
9164 11980 3.330701 TCCAGCAGTCCCAAGTTCTTATT 59.669 43.478 0.00 0.00 0.00 1.40
9165 11981 2.912956 TCCAGCAGTCCCAAGTTCTTAT 59.087 45.455 0.00 0.00 0.00 1.73
9166 11982 2.038557 GTCCAGCAGTCCCAAGTTCTTA 59.961 50.000 0.00 0.00 0.00 2.10
9167 11983 1.140312 TCCAGCAGTCCCAAGTTCTT 58.860 50.000 0.00 0.00 0.00 2.52
9168 11984 0.398318 GTCCAGCAGTCCCAAGTTCT 59.602 55.000 0.00 0.00 0.00 3.01
9169 11985 0.606673 GGTCCAGCAGTCCCAAGTTC 60.607 60.000 0.00 0.00 0.00 3.01
9170 11986 1.352622 TGGTCCAGCAGTCCCAAGTT 61.353 55.000 0.00 0.00 0.00 2.66
9171 11987 1.136329 ATGGTCCAGCAGTCCCAAGT 61.136 55.000 0.00 0.00 0.00 3.16
9172 11988 0.038744 AATGGTCCAGCAGTCCCAAG 59.961 55.000 0.00 0.00 0.00 3.61
9173 11989 0.482446 AAATGGTCCAGCAGTCCCAA 59.518 50.000 0.00 0.00 0.00 4.12
9174 11990 0.251297 CAAATGGTCCAGCAGTCCCA 60.251 55.000 0.00 0.00 0.00 4.37
9175 11991 0.967380 CCAAATGGTCCAGCAGTCCC 60.967 60.000 0.00 0.00 0.00 4.46
9176 11992 1.598701 GCCAAATGGTCCAGCAGTCC 61.599 60.000 0.00 0.00 37.57 3.85
9177 11993 0.610232 AGCCAAATGGTCCAGCAGTC 60.610 55.000 0.00 0.00 37.57 3.51
9178 11994 0.610232 GAGCCAAATGGTCCAGCAGT 60.610 55.000 0.00 0.00 35.38 4.40
9179 11995 0.609957 TGAGCCAAATGGTCCAGCAG 60.610 55.000 0.00 0.00 40.88 4.24
9180 11996 0.895100 GTGAGCCAAATGGTCCAGCA 60.895 55.000 0.00 0.00 40.88 4.41
9181 11997 0.610232 AGTGAGCCAAATGGTCCAGC 60.610 55.000 0.00 0.00 40.88 4.85
9182 11998 1.915141 AAGTGAGCCAAATGGTCCAG 58.085 50.000 0.00 0.00 40.88 3.86
9183 11999 2.380064 AAAGTGAGCCAAATGGTCCA 57.620 45.000 0.00 0.00 40.88 4.02
9184 12000 3.392882 CAAAAAGTGAGCCAAATGGTCC 58.607 45.455 0.71 0.00 40.88 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.