Multiple sequence alignment - TraesCS2B01G234200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G234200 chr2B 100.000 1344 0 0 1 1344 232836161 232834818 0.000000e+00 2483
1 TraesCS2B01G234200 chr2B 100.000 425 0 0 1858 2282 232834304 232833880 0.000000e+00 785
2 TraesCS2B01G234200 chr2B 95.628 366 14 2 1918 2282 232812085 232811721 9.080000e-164 586
3 TraesCS2B01G234200 chr2B 93.681 364 22 1 1918 2281 190413379 190413017 5.540000e-151 544
4 TraesCS2B01G234200 chr5D 98.722 1017 11 1 327 1341 354744541 354743525 0.000000e+00 1805
5 TraesCS2B01G234200 chr5D 97.817 1008 20 2 327 1334 547845816 547846821 0.000000e+00 1738
6 TraesCS2B01G234200 chr5D 94.247 365 20 1 1918 2282 247086940 247086577 7.120000e-155 556
7 TraesCS2B01G234200 chr5D 94.247 365 19 2 1918 2282 247094405 247094043 7.120000e-155 556
8 TraesCS2B01G234200 chr5D 93.213 221 13 2 108 327 98271933 98272152 7.860000e-85 324
9 TraesCS2B01G234200 chr5D 92.444 225 15 2 106 329 484573810 484573587 1.020000e-83 320
10 TraesCS2B01G234200 chr5D 96.330 109 4 0 1 109 354744646 354744538 1.800000e-41 180
11 TraesCS2B01G234200 chr5D 96.330 109 4 0 1 109 547845711 547845819 1.800000e-41 180
12 TraesCS2B01G234200 chr5D 98.529 68 0 1 1858 1925 354743475 354743409 3.980000e-23 119
13 TraesCS2B01G234200 chr7D 98.531 1021 11 3 327 1343 449769347 449768327 0.000000e+00 1799
14 TraesCS2B01G234200 chr7D 96.330 109 4 0 1 109 449769452 449769344 1.800000e-41 180
15 TraesCS2B01G234200 chr4A 98.528 1019 14 1 327 1344 491456915 491455897 0.000000e+00 1797
16 TraesCS2B01G234200 chr4A 96.330 109 4 0 1 109 491457020 491456912 1.800000e-41 180
17 TraesCS2B01G234200 chr3D 98.527 1018 15 0 327 1344 14356607 14355590 0.000000e+00 1797
18 TraesCS2B01G234200 chr3D 93.333 225 14 1 106 329 147687061 147686837 4.700000e-87 331
19 TraesCS2B01G234200 chr3D 94.495 109 5 1 1 109 14356711 14356604 1.400000e-37 167
20 TraesCS2B01G234200 chr2A 98.330 1018 17 0 327 1344 23467831 23468848 0.000000e+00 1786
21 TraesCS2B01G234200 chr2A 92.444 225 15 2 108 330 763806975 763807199 1.020000e-83 320
22 TraesCS2B01G234200 chr2A 95.413 109 5 0 1 109 23467726 23467834 8.380000e-40 174
23 TraesCS2B01G234200 chr2A 100.000 67 0 0 1858 1924 23468935 23469001 8.560000e-25 124
24 TraesCS2B01G234200 chr1D 98.043 1022 16 2 327 1344 417747402 417746381 0.000000e+00 1773
25 TraesCS2B01G234200 chr1D 91.810 232 16 3 106 335 243305122 243304892 1.020000e-83 320
26 TraesCS2B01G234200 chr1D 92.377 223 16 1 107 328 79313549 79313771 1.320000e-82 316
27 TraesCS2B01G234200 chr1D 97.015 67 2 0 1858 1924 417746306 417746240 1.850000e-21 113
28 TraesCS2B01G234200 chr5A 97.937 1018 21 0 327 1344 476064136 476063119 0.000000e+00 1764
29 TraesCS2B01G234200 chr5A 95.413 109 5 0 1 109 476064241 476064133 8.380000e-40 174
30 TraesCS2B01G234200 chr5A 95.327 107 5 0 3 109 651581648 651581542 1.080000e-38 171
31 TraesCS2B01G234200 chr5A 100.000 65 0 0 1858 1922 476063062 476062998 1.110000e-23 121
32 TraesCS2B01G234200 chr5A 94.286 70 4 0 1858 1927 651580485 651580416 8.620000e-20 108
33 TraesCS2B01G234200 chr1B 96.667 1020 31 3 327 1344 497827765 497828783 0.000000e+00 1692
34 TraesCS2B01G234200 chr1B 97.015 67 2 0 1858 1924 494553899 494553833 1.850000e-21 113
35 TraesCS2B01G234200 chr1B 97.015 67 2 0 1858 1924 497828862 497828928 1.850000e-21 113
36 TraesCS2B01G234200 chr1B 95.588 68 2 1 1862 1929 46155946 46155880 8.620000e-20 108
37 TraesCS2B01G234200 chr2D 89.443 1023 102 4 327 1344 573649692 573650713 0.000000e+00 1286
38 TraesCS2B01G234200 chr5B 94.521 365 17 3 1918 2282 256822914 256822553 5.500000e-156 560
39 TraesCS2B01G234200 chr5B 94.708 359 18 1 1925 2282 208669608 208669966 7.120000e-155 556
40 TraesCS2B01G234200 chr5B 94.150 359 20 1 1925 2282 256835179 256834821 1.540000e-151 545
41 TraesCS2B01G234200 chr3B 93.989 366 20 2 1918 2282 68185269 68185633 9.210000e-154 553
42 TraesCS2B01G234200 chr3B 92.000 225 17 1 106 329 421714943 421714719 4.730000e-82 315
43 TraesCS2B01G234200 chr3B 96.330 109 4 0 1 109 485534430 485534322 1.800000e-41 180
44 TraesCS2B01G234200 chr7B 93.699 365 18 3 1918 2282 198113114 198112755 1.990000e-150 542
45 TraesCS2B01G234200 chr4D 92.511 227 16 1 104 329 497017065 497016839 7.860000e-85 324
46 TraesCS2B01G234200 chr4D 92.000 225 17 1 106 329 207718522 207718298 4.730000e-82 315
47 TraesCS2B01G234200 chr4B 97.015 67 2 0 1858 1924 502277439 502277505 1.850000e-21 113


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G234200 chr2B 232833880 232836161 2281 True 1634.000000 2483 100.000000 1 2282 2 chr2B.!!$R3 2281
1 TraesCS2B01G234200 chr5D 547845711 547846821 1110 False 959.000000 1738 97.073500 1 1334 2 chr5D.!!$F2 1333
2 TraesCS2B01G234200 chr5D 354743409 354744646 1237 True 701.333333 1805 97.860333 1 1925 3 chr5D.!!$R4 1924
3 TraesCS2B01G234200 chr7D 449768327 449769452 1125 True 989.500000 1799 97.430500 1 1343 2 chr7D.!!$R1 1342
4 TraesCS2B01G234200 chr4A 491455897 491457020 1123 True 988.500000 1797 97.429000 1 1344 2 chr4A.!!$R1 1343
5 TraesCS2B01G234200 chr3D 14355590 14356711 1121 True 982.000000 1797 96.511000 1 1344 2 chr3D.!!$R2 1343
6 TraesCS2B01G234200 chr2A 23467726 23469001 1275 False 694.666667 1786 97.914333 1 1924 3 chr2A.!!$F2 1923
7 TraesCS2B01G234200 chr1D 417746240 417747402 1162 True 943.000000 1773 97.529000 327 1924 2 chr1D.!!$R2 1597
8 TraesCS2B01G234200 chr5A 476062998 476064241 1243 True 686.333333 1764 97.783333 1 1922 3 chr5A.!!$R1 1921
9 TraesCS2B01G234200 chr1B 497827765 497828928 1163 False 902.500000 1692 96.841000 327 1924 2 chr1B.!!$F1 1597
10 TraesCS2B01G234200 chr2D 573649692 573650713 1021 False 1286.000000 1286 89.443000 327 1344 1 chr2D.!!$F1 1017

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
159 160 0.322816 CTGCAAAAGGCTGCCCTCTA 60.323 55.0 16.57 0.0 41.9 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2089 2101 0.034186 GGATGGGATTGGAGTGTGCA 60.034 55.0 0.0 0.0 0.0 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 101 5.120363 GGAGAGTCGAATCAAAAGTGTTACC 59.880 44.000 16.10 0.00 0.00 2.85
105 106 4.214545 TCGAATCAAAAGTGTTACCGCAAT 59.785 37.500 0.00 0.00 0.00 3.56
106 107 5.408909 TCGAATCAAAAGTGTTACCGCAATA 59.591 36.000 0.00 0.00 0.00 1.90
107 108 6.073167 TCGAATCAAAAGTGTTACCGCAATAA 60.073 34.615 0.00 0.00 0.00 1.40
108 109 6.248420 CGAATCAAAAGTGTTACCGCAATAAG 59.752 38.462 0.00 0.00 0.00 1.73
109 110 5.365403 TCAAAAGTGTTACCGCAATAAGG 57.635 39.130 0.00 0.00 0.00 2.69
110 111 4.216687 TCAAAAGTGTTACCGCAATAAGGG 59.783 41.667 0.00 0.00 0.00 3.95
111 112 1.746470 AGTGTTACCGCAATAAGGGC 58.254 50.000 0.00 0.00 0.00 5.19
112 113 0.736636 GTGTTACCGCAATAAGGGCC 59.263 55.000 0.00 0.00 0.00 5.80
113 114 0.328592 TGTTACCGCAATAAGGGCCA 59.671 50.000 6.18 0.00 0.00 5.36
114 115 1.021968 GTTACCGCAATAAGGGCCAG 58.978 55.000 6.18 0.00 0.00 4.85
115 116 0.621609 TTACCGCAATAAGGGCCAGT 59.378 50.000 6.18 0.00 0.00 4.00
116 117 0.621609 TACCGCAATAAGGGCCAGTT 59.378 50.000 6.18 0.00 0.00 3.16
117 118 0.679960 ACCGCAATAAGGGCCAGTTC 60.680 55.000 6.18 0.00 0.00 3.01
118 119 0.394352 CCGCAATAAGGGCCAGTTCT 60.394 55.000 6.18 0.00 0.00 3.01
119 120 1.463674 CGCAATAAGGGCCAGTTCTT 58.536 50.000 6.18 0.29 0.00 2.52
120 121 1.818674 CGCAATAAGGGCCAGTTCTTT 59.181 47.619 6.18 0.00 0.00 2.52
121 122 2.231235 CGCAATAAGGGCCAGTTCTTTT 59.769 45.455 6.18 0.00 0.00 2.27
122 123 3.588955 GCAATAAGGGCCAGTTCTTTTG 58.411 45.455 6.18 7.38 0.00 2.44
123 124 3.258123 GCAATAAGGGCCAGTTCTTTTGA 59.742 43.478 6.18 0.00 0.00 2.69
124 125 4.081476 GCAATAAGGGCCAGTTCTTTTGAT 60.081 41.667 6.18 0.00 0.00 2.57
125 126 5.413499 CAATAAGGGCCAGTTCTTTTGATG 58.587 41.667 6.18 0.00 0.00 3.07
126 127 1.928868 AGGGCCAGTTCTTTTGATGG 58.071 50.000 6.18 0.00 32.99 3.51
130 131 2.951726 GCCAGTTCTTTTGATGGCTTC 58.048 47.619 7.78 0.00 46.07 3.86
131 132 2.560105 GCCAGTTCTTTTGATGGCTTCT 59.440 45.455 7.78 0.00 46.07 2.85
132 133 3.758554 GCCAGTTCTTTTGATGGCTTCTA 59.241 43.478 7.78 0.00 46.07 2.10
133 134 4.142513 GCCAGTTCTTTTGATGGCTTCTAG 60.143 45.833 7.78 0.00 46.07 2.43
134 135 5.248640 CCAGTTCTTTTGATGGCTTCTAGA 58.751 41.667 1.86 0.00 0.00 2.43
135 136 5.707298 CCAGTTCTTTTGATGGCTTCTAGAA 59.293 40.000 4.81 4.81 0.00 2.10
136 137 6.376581 CCAGTTCTTTTGATGGCTTCTAGAAT 59.623 38.462 5.44 0.00 0.00 2.40
137 138 7.554118 CCAGTTCTTTTGATGGCTTCTAGAATA 59.446 37.037 5.44 0.00 0.00 1.75
138 139 8.950210 CAGTTCTTTTGATGGCTTCTAGAATAA 58.050 33.333 5.44 0.00 0.00 1.40
139 140 9.171877 AGTTCTTTTGATGGCTTCTAGAATAAG 57.828 33.333 5.44 0.00 0.00 1.73
140 141 7.559590 TCTTTTGATGGCTTCTAGAATAAGC 57.440 36.000 5.44 5.98 46.90 3.09
141 142 7.341805 TCTTTTGATGGCTTCTAGAATAAGCT 58.658 34.615 13.28 0.00 46.81 3.74
142 143 6.932356 TTTGATGGCTTCTAGAATAAGCTG 57.068 37.500 13.28 0.00 46.81 4.24
143 144 4.384056 TGATGGCTTCTAGAATAAGCTGC 58.616 43.478 13.28 8.77 46.81 5.25
144 145 3.912496 TGGCTTCTAGAATAAGCTGCA 57.088 42.857 13.28 3.14 46.81 4.41
145 146 4.220693 TGGCTTCTAGAATAAGCTGCAA 57.779 40.909 13.28 0.69 46.81 4.08
146 147 4.588899 TGGCTTCTAGAATAAGCTGCAAA 58.411 39.130 13.28 0.35 46.81 3.68
147 148 5.009631 TGGCTTCTAGAATAAGCTGCAAAA 58.990 37.500 13.28 0.00 46.81 2.44
148 149 5.124457 TGGCTTCTAGAATAAGCTGCAAAAG 59.876 40.000 13.28 0.00 46.81 2.27
149 150 5.449725 GGCTTCTAGAATAAGCTGCAAAAGG 60.450 44.000 13.28 0.00 46.81 3.11
150 151 5.567138 TTCTAGAATAAGCTGCAAAAGGC 57.433 39.130 0.00 0.00 45.13 4.35
151 152 4.848357 TCTAGAATAAGCTGCAAAAGGCT 58.152 39.130 1.02 0.00 45.15 4.58
152 153 3.863142 AGAATAAGCTGCAAAAGGCTG 57.137 42.857 1.02 0.00 45.15 4.85
157 158 2.968206 CTGCAAAAGGCTGCCCTC 59.032 61.111 16.57 0.64 41.90 4.30
158 159 1.605738 CTGCAAAAGGCTGCCCTCT 60.606 57.895 16.57 0.00 41.90 3.69
159 160 0.322816 CTGCAAAAGGCTGCCCTCTA 60.323 55.000 16.57 0.00 41.90 2.43
160 161 0.609131 TGCAAAAGGCTGCCCTCTAC 60.609 55.000 16.57 3.22 41.90 2.59
161 162 1.315981 GCAAAAGGCTGCCCTCTACC 61.316 60.000 16.57 0.00 41.90 3.18
162 163 0.681243 CAAAAGGCTGCCCTCTACCC 60.681 60.000 16.57 0.00 41.90 3.69
163 164 1.140134 AAAAGGCTGCCCTCTACCCA 61.140 55.000 16.57 0.00 41.90 4.51
164 165 1.566298 AAAGGCTGCCCTCTACCCAG 61.566 60.000 16.57 0.00 41.90 4.45
166 167 3.086600 GCTGCCCTCTACCCAGCT 61.087 66.667 4.74 0.00 46.28 4.24
167 168 2.674220 GCTGCCCTCTACCCAGCTT 61.674 63.158 4.74 0.00 46.28 3.74
168 169 1.338136 GCTGCCCTCTACCCAGCTTA 61.338 60.000 4.74 0.00 46.28 3.09
169 170 1.428869 CTGCCCTCTACCCAGCTTAT 58.571 55.000 0.00 0.00 0.00 1.73
170 171 1.771255 CTGCCCTCTACCCAGCTTATT 59.229 52.381 0.00 0.00 0.00 1.40
171 172 1.768870 TGCCCTCTACCCAGCTTATTC 59.231 52.381 0.00 0.00 0.00 1.75
172 173 2.050918 GCCCTCTACCCAGCTTATTCT 58.949 52.381 0.00 0.00 0.00 2.40
173 174 3.240302 GCCCTCTACCCAGCTTATTCTA 58.760 50.000 0.00 0.00 0.00 2.10
174 175 3.646637 GCCCTCTACCCAGCTTATTCTAA 59.353 47.826 0.00 0.00 0.00 2.10
175 176 4.102681 GCCCTCTACCCAGCTTATTCTAAA 59.897 45.833 0.00 0.00 0.00 1.85
176 177 5.397559 GCCCTCTACCCAGCTTATTCTAAAA 60.398 44.000 0.00 0.00 0.00 1.52
177 178 6.292150 CCCTCTACCCAGCTTATTCTAAAAG 58.708 44.000 0.00 0.00 0.00 2.27
186 187 5.400066 GCTTATTCTAAAAGCCCAACCAA 57.600 39.130 0.00 0.00 42.85 3.67
187 188 5.789521 GCTTATTCTAAAAGCCCAACCAAA 58.210 37.500 0.00 0.00 42.85 3.28
188 189 6.227522 GCTTATTCTAAAAGCCCAACCAAAA 58.772 36.000 0.00 0.00 42.85 2.44
189 190 6.878923 GCTTATTCTAAAAGCCCAACCAAAAT 59.121 34.615 0.00 0.00 42.85 1.82
190 191 7.390440 GCTTATTCTAAAAGCCCAACCAAAATT 59.610 33.333 0.00 0.00 42.85 1.82
191 192 9.283768 CTTATTCTAAAAGCCCAACCAAAATTT 57.716 29.630 0.00 0.00 0.00 1.82
192 193 9.634021 TTATTCTAAAAGCCCAACCAAAATTTT 57.366 25.926 0.00 0.00 0.00 1.82
193 194 7.561021 TTCTAAAAGCCCAACCAAAATTTTC 57.439 32.000 0.00 0.00 0.00 2.29
194 195 6.894682 TCTAAAAGCCCAACCAAAATTTTCT 58.105 32.000 0.00 0.00 0.00 2.52
195 196 7.342581 TCTAAAAGCCCAACCAAAATTTTCTT 58.657 30.769 0.00 0.00 0.00 2.52
196 197 6.849085 AAAAGCCCAACCAAAATTTTCTTT 57.151 29.167 0.00 3.41 0.00 2.52
197 198 6.849085 AAAGCCCAACCAAAATTTTCTTTT 57.151 29.167 0.00 0.00 0.00 2.27
198 199 6.849085 AAGCCCAACCAAAATTTTCTTTTT 57.151 29.167 0.00 0.00 0.00 1.94
199 200 7.946381 AAGCCCAACCAAAATTTTCTTTTTA 57.054 28.000 0.00 0.00 0.00 1.52
200 201 7.566760 AGCCCAACCAAAATTTTCTTTTTAG 57.433 32.000 0.00 0.00 0.00 1.85
201 202 7.342581 AGCCCAACCAAAATTTTCTTTTTAGA 58.657 30.769 0.00 0.00 0.00 2.10
202 203 7.831690 AGCCCAACCAAAATTTTCTTTTTAGAA 59.168 29.630 0.00 0.00 0.00 2.10
203 204 8.128582 GCCCAACCAAAATTTTCTTTTTAGAAG 58.871 33.333 0.00 0.00 0.00 2.85
204 205 8.128582 CCCAACCAAAATTTTCTTTTTAGAAGC 58.871 33.333 0.00 0.00 0.00 3.86
205 206 8.128582 CCAACCAAAATTTTCTTTTTAGAAGCC 58.871 33.333 0.00 0.00 0.00 4.35
206 207 8.892723 CAACCAAAATTTTCTTTTTAGAAGCCT 58.107 29.630 0.00 0.00 0.00 4.58
208 209 9.764363 ACCAAAATTTTCTTTTTAGAAGCCTAG 57.236 29.630 0.00 0.00 0.00 3.02
209 210 9.764363 CCAAAATTTTCTTTTTAGAAGCCTAGT 57.236 29.630 0.00 0.00 0.00 2.57
217 218 9.939802 TTCTTTTTAGAAGCCTAGTAGTTAAGG 57.060 33.333 0.00 0.00 35.86 2.69
242 243 5.746990 AGACTAGCAGGCTTCTAAAAAGA 57.253 39.130 0.00 0.00 17.74 2.52
243 244 6.115448 AGACTAGCAGGCTTCTAAAAAGAA 57.885 37.500 0.00 0.00 17.74 2.52
244 245 6.534634 AGACTAGCAGGCTTCTAAAAAGAAA 58.465 36.000 0.00 0.00 17.74 2.52
245 246 6.998673 AGACTAGCAGGCTTCTAAAAAGAAAA 59.001 34.615 0.00 0.00 17.74 2.29
246 247 7.667635 AGACTAGCAGGCTTCTAAAAAGAAAAT 59.332 33.333 0.00 0.00 17.74 1.82
247 248 8.183104 ACTAGCAGGCTTCTAAAAAGAAAATT 57.817 30.769 0.00 0.00 0.00 1.82
248 249 8.642432 ACTAGCAGGCTTCTAAAAAGAAAATTT 58.358 29.630 0.00 0.00 0.00 1.82
249 250 9.481340 CTAGCAGGCTTCTAAAAAGAAAATTTT 57.519 29.630 2.28 2.28 36.52 1.82
250 251 8.146479 AGCAGGCTTCTAAAAAGAAAATTTTG 57.854 30.769 8.47 0.00 34.51 2.44
251 252 7.227314 AGCAGGCTTCTAAAAAGAAAATTTTGG 59.773 33.333 8.47 0.00 34.51 3.28
252 253 7.012327 GCAGGCTTCTAAAAAGAAAATTTTGGT 59.988 33.333 8.47 0.00 33.84 3.67
253 254 8.892723 CAGGCTTCTAAAAAGAAAATTTTGGTT 58.107 29.630 8.47 0.00 33.84 3.67
254 255 8.892723 AGGCTTCTAAAAAGAAAATTTTGGTTG 58.107 29.630 8.47 0.00 33.84 3.77
255 256 8.128582 GGCTTCTAAAAAGAAAATTTTGGTTGG 58.871 33.333 8.47 0.00 33.84 3.77
256 257 8.128582 GCTTCTAAAAAGAAAATTTTGGTTGGG 58.871 33.333 8.47 0.00 33.84 4.12
257 258 7.561021 TCTAAAAAGAAAATTTTGGTTGGGC 57.439 32.000 8.47 0.00 33.84 5.36
258 259 7.342581 TCTAAAAAGAAAATTTTGGTTGGGCT 58.657 30.769 8.47 0.00 33.84 5.19
259 260 6.849085 AAAAAGAAAATTTTGGTTGGGCTT 57.151 29.167 8.47 0.70 31.55 4.35
260 261 6.449635 AAAAGAAAATTTTGGTTGGGCTTC 57.550 33.333 8.47 0.00 0.00 3.86
261 262 5.372343 AAGAAAATTTTGGTTGGGCTTCT 57.628 34.783 8.47 0.00 0.00 2.85
262 263 6.493189 AAGAAAATTTTGGTTGGGCTTCTA 57.507 33.333 8.47 0.00 0.00 2.10
263 264 6.101650 AGAAAATTTTGGTTGGGCTTCTAG 57.898 37.500 8.47 0.00 0.00 2.43
264 265 5.838521 AGAAAATTTTGGTTGGGCTTCTAGA 59.161 36.000 8.47 0.00 0.00 2.43
265 266 6.326323 AGAAAATTTTGGTTGGGCTTCTAGAA 59.674 34.615 8.47 4.81 0.00 2.10
266 267 6.686484 AAATTTTGGTTGGGCTTCTAGAAT 57.314 33.333 5.44 0.00 0.00 2.40
267 268 7.790782 AAATTTTGGTTGGGCTTCTAGAATA 57.209 32.000 5.44 0.00 0.00 1.75
268 269 7.790782 AATTTTGGTTGGGCTTCTAGAATAA 57.209 32.000 5.44 0.00 0.00 1.40
269 270 6.834168 TTTTGGTTGGGCTTCTAGAATAAG 57.166 37.500 5.44 0.00 0.00 1.73
270 271 3.886123 TGGTTGGGCTTCTAGAATAAGC 58.114 45.455 5.44 5.98 46.90 3.09
271 272 3.523564 TGGTTGGGCTTCTAGAATAAGCT 59.476 43.478 13.28 0.00 46.81 3.74
272 273 3.879892 GGTTGGGCTTCTAGAATAAGCTG 59.120 47.826 13.28 0.00 46.81 4.24
273 274 3.845781 TGGGCTTCTAGAATAAGCTGG 57.154 47.619 13.28 0.00 46.81 4.85
274 275 3.384168 TGGGCTTCTAGAATAAGCTGGA 58.616 45.455 13.28 0.00 46.81 3.86
275 276 3.976654 TGGGCTTCTAGAATAAGCTGGAT 59.023 43.478 13.28 0.00 46.81 3.41
276 277 5.155161 TGGGCTTCTAGAATAAGCTGGATA 58.845 41.667 13.28 0.00 46.81 2.59
277 278 5.247110 TGGGCTTCTAGAATAAGCTGGATAG 59.753 44.000 13.28 0.00 46.81 2.08
278 279 5.337975 GGGCTTCTAGAATAAGCTGGATAGG 60.338 48.000 13.28 0.00 46.81 2.57
279 280 5.337975 GGCTTCTAGAATAAGCTGGATAGGG 60.338 48.000 13.28 0.00 46.81 3.53
280 281 5.337975 GCTTCTAGAATAAGCTGGATAGGGG 60.338 48.000 5.44 0.00 44.75 4.79
281 282 4.097418 TCTAGAATAAGCTGGATAGGGGC 58.903 47.826 0.00 0.00 0.00 5.80
282 283 2.706350 AGAATAAGCTGGATAGGGGCA 58.294 47.619 0.00 0.00 0.00 5.36
283 284 2.641815 AGAATAAGCTGGATAGGGGCAG 59.358 50.000 0.00 0.00 0.00 4.85
284 285 0.695347 ATAAGCTGGATAGGGGCAGC 59.305 55.000 0.00 0.00 40.66 5.25
285 286 2.040043 AGCTGGATAGGGGCAGCT 60.040 61.111 0.00 0.00 45.07 4.24
286 287 2.922234 GCTGGATAGGGGCAGCTT 59.078 61.111 0.00 0.00 37.66 3.74
287 288 2.145865 GCTGGATAGGGGCAGCTTA 58.854 57.895 0.00 0.00 37.66 3.09
288 289 0.695347 GCTGGATAGGGGCAGCTTAT 59.305 55.000 0.00 0.00 37.66 1.73
289 290 1.074566 GCTGGATAGGGGCAGCTTATT 59.925 52.381 0.00 0.00 37.66 1.40
290 291 2.877708 GCTGGATAGGGGCAGCTTATTC 60.878 54.545 0.00 0.00 37.66 1.75
291 292 2.641815 CTGGATAGGGGCAGCTTATTCT 59.358 50.000 0.00 0.00 0.00 2.40
292 293 2.373169 TGGATAGGGGCAGCTTATTCTG 59.627 50.000 0.00 0.00 37.15 3.02
293 294 2.290577 GGATAGGGGCAGCTTATTCTGG 60.291 54.545 0.00 0.00 34.74 3.86
294 295 2.190398 TAGGGGCAGCTTATTCTGGA 57.810 50.000 0.00 0.00 34.74 3.86
295 296 1.298953 AGGGGCAGCTTATTCTGGAA 58.701 50.000 0.00 0.00 34.74 3.53
296 297 1.213926 AGGGGCAGCTTATTCTGGAAG 59.786 52.381 0.00 0.00 34.74 3.46
323 324 3.650070 AAAGCTAGCAAAAGAACTGGC 57.350 42.857 18.83 0.00 40.38 4.85
324 325 1.539157 AGCTAGCAAAAGAACTGGCC 58.461 50.000 18.83 0.00 40.92 5.36
325 326 0.528017 GCTAGCAAAAGAACTGGCCC 59.472 55.000 10.63 0.00 34.61 5.80
617 618 3.744238 TTCTTCAAGTGTGACCATCGA 57.256 42.857 0.00 0.00 31.90 3.59
893 896 8.316640 AGTGATAATGAACTTGAAGAGTGTTC 57.683 34.615 0.00 0.00 39.00 3.18
1939 1951 0.839946 CCTGGGTGGGATAGACAAGG 59.160 60.000 0.00 0.00 0.00 3.61
1940 1952 1.584724 CTGGGTGGGATAGACAAGGT 58.415 55.000 0.00 0.00 0.00 3.50
1941 1953 1.916181 CTGGGTGGGATAGACAAGGTT 59.084 52.381 0.00 0.00 0.00 3.50
1942 1954 1.633432 TGGGTGGGATAGACAAGGTTG 59.367 52.381 0.00 0.00 0.00 3.77
1943 1955 1.682087 GGGTGGGATAGACAAGGTTGC 60.682 57.143 0.00 0.00 0.00 4.17
1944 1956 1.282157 GGTGGGATAGACAAGGTTGCT 59.718 52.381 0.00 0.00 0.00 3.91
1945 1957 2.290960 GGTGGGATAGACAAGGTTGCTT 60.291 50.000 0.00 0.00 0.00 3.91
1946 1958 3.010420 GTGGGATAGACAAGGTTGCTTC 58.990 50.000 0.00 0.00 0.00 3.86
1947 1959 2.912956 TGGGATAGACAAGGTTGCTTCT 59.087 45.455 0.00 0.00 0.00 2.85
1948 1960 3.330701 TGGGATAGACAAGGTTGCTTCTT 59.669 43.478 0.00 0.00 0.00 2.52
1949 1961 3.942115 GGGATAGACAAGGTTGCTTCTTC 59.058 47.826 0.00 0.00 0.00 2.87
1950 1962 4.565652 GGGATAGACAAGGTTGCTTCTTCA 60.566 45.833 0.00 0.00 0.00 3.02
1951 1963 5.189180 GGATAGACAAGGTTGCTTCTTCAT 58.811 41.667 0.00 0.00 0.00 2.57
1952 1964 5.065731 GGATAGACAAGGTTGCTTCTTCATG 59.934 44.000 0.00 0.00 0.00 3.07
1953 1965 3.152341 AGACAAGGTTGCTTCTTCATGG 58.848 45.455 0.00 0.00 0.00 3.66
1954 1966 3.149196 GACAAGGTTGCTTCTTCATGGA 58.851 45.455 0.00 0.00 0.00 3.41
1955 1967 2.887152 ACAAGGTTGCTTCTTCATGGAC 59.113 45.455 0.00 0.00 0.00 4.02
1956 1968 2.206576 AGGTTGCTTCTTCATGGACC 57.793 50.000 0.00 0.00 0.00 4.46
1957 1969 1.177401 GGTTGCTTCTTCATGGACCC 58.823 55.000 0.00 0.00 0.00 4.46
1958 1970 1.272147 GGTTGCTTCTTCATGGACCCT 60.272 52.381 0.00 0.00 0.00 4.34
1959 1971 2.519013 GTTGCTTCTTCATGGACCCTT 58.481 47.619 0.00 0.00 0.00 3.95
1960 1972 2.489722 GTTGCTTCTTCATGGACCCTTC 59.510 50.000 0.00 0.00 0.00 3.46
1961 1973 1.339055 TGCTTCTTCATGGACCCTTCG 60.339 52.381 0.00 0.00 0.00 3.79
1962 1974 1.339151 GCTTCTTCATGGACCCTTCGT 60.339 52.381 0.00 0.00 0.00 3.85
1963 1975 2.350522 CTTCTTCATGGACCCTTCGTG 58.649 52.381 0.00 0.00 0.00 4.35
1964 1976 0.613260 TCTTCATGGACCCTTCGTGG 59.387 55.000 0.00 0.00 0.00 4.94
1984 1996 3.844741 GGAGCCCTCCGTAGACTC 58.155 66.667 0.00 0.00 40.36 3.36
1985 1997 1.076923 GGAGCCCTCCGTAGACTCA 60.077 63.158 0.00 0.00 40.36 3.41
1986 1998 1.385756 GGAGCCCTCCGTAGACTCAC 61.386 65.000 0.00 0.00 40.36 3.51
1987 1999 1.716826 GAGCCCTCCGTAGACTCACG 61.717 65.000 0.00 0.00 41.59 4.35
1988 2000 2.799371 CCCTCCGTAGACTCACGC 59.201 66.667 0.00 0.00 40.59 5.34
1989 2001 2.044555 CCCTCCGTAGACTCACGCA 61.045 63.158 0.00 0.00 40.59 5.24
1990 2002 1.429825 CCTCCGTAGACTCACGCAG 59.570 63.158 0.00 0.00 40.59 5.18
1991 2003 1.226435 CTCCGTAGACTCACGCAGC 60.226 63.158 0.00 0.00 40.59 5.25
1992 2004 2.202623 CCGTAGACTCACGCAGCC 60.203 66.667 0.00 0.00 40.59 4.85
1993 2005 2.577112 CGTAGACTCACGCAGCCG 60.577 66.667 0.00 0.00 41.14 5.52
2005 2017 3.726517 CAGCCGTTGCCCTTCGTG 61.727 66.667 0.00 0.00 38.69 4.35
2017 2029 1.797025 CCTTCGTGGGTTGAAGTCTC 58.203 55.000 2.47 0.00 40.96 3.36
2018 2030 1.608283 CCTTCGTGGGTTGAAGTCTCC 60.608 57.143 2.47 0.00 40.96 3.71
2019 2031 1.070134 CTTCGTGGGTTGAAGTCTCCA 59.930 52.381 0.00 0.00 38.39 3.86
2020 2032 1.348064 TCGTGGGTTGAAGTCTCCAT 58.652 50.000 0.00 0.00 0.00 3.41
2021 2033 1.275291 TCGTGGGTTGAAGTCTCCATC 59.725 52.381 0.00 0.00 0.00 3.51
2022 2034 1.726853 GTGGGTTGAAGTCTCCATCG 58.273 55.000 0.00 0.00 0.00 3.84
2023 2035 1.275291 GTGGGTTGAAGTCTCCATCGA 59.725 52.381 0.00 0.00 0.00 3.59
2024 2036 1.275291 TGGGTTGAAGTCTCCATCGAC 59.725 52.381 0.00 0.00 0.00 4.20
2025 2037 1.630148 GGTTGAAGTCTCCATCGACG 58.370 55.000 0.00 0.00 38.90 5.12
2026 2038 1.067776 GGTTGAAGTCTCCATCGACGT 60.068 52.381 0.00 0.00 38.90 4.34
2027 2039 1.986378 GTTGAAGTCTCCATCGACGTG 59.014 52.381 0.00 0.00 38.90 4.49
2028 2040 0.526211 TGAAGTCTCCATCGACGTGG 59.474 55.000 0.00 9.38 38.90 4.94
2029 2041 0.809385 GAAGTCTCCATCGACGTGGA 59.191 55.000 15.32 15.32 45.78 4.02
2030 2042 1.405821 GAAGTCTCCATCGACGTGGAT 59.594 52.381 16.14 7.30 46.67 3.41
2031 2043 0.741326 AGTCTCCATCGACGTGGATG 59.259 55.000 27.80 27.80 46.67 3.51
2032 2044 0.456221 GTCTCCATCGACGTGGATGT 59.544 55.000 30.60 3.94 46.67 3.06
2033 2045 1.674441 GTCTCCATCGACGTGGATGTA 59.326 52.381 30.60 19.57 46.67 2.29
2034 2046 1.674441 TCTCCATCGACGTGGATGTAC 59.326 52.381 30.60 0.00 46.67 2.90
2035 2047 0.379316 TCCATCGACGTGGATGTACG 59.621 55.000 30.60 19.62 43.20 3.67
2036 2048 0.379316 CCATCGACGTGGATGTACGA 59.621 55.000 30.60 16.07 46.46 3.43
2037 2049 1.001706 CCATCGACGTGGATGTACGAT 60.002 52.381 30.60 17.46 46.46 3.73
2038 2050 2.224784 CCATCGACGTGGATGTACGATA 59.775 50.000 30.60 0.00 46.46 2.92
2039 2051 3.479949 CATCGACGTGGATGTACGATAG 58.520 50.000 26.80 9.45 46.46 2.08
2040 2052 1.262417 TCGACGTGGATGTACGATAGC 59.738 52.381 0.00 0.00 46.46 2.97
2041 2053 1.003223 CGACGTGGATGTACGATAGCA 60.003 52.381 0.00 0.00 46.46 3.49
2042 2054 2.382519 GACGTGGATGTACGATAGCAC 58.617 52.381 0.00 0.00 46.46 4.40
2043 2055 1.066605 ACGTGGATGTACGATAGCACC 59.933 52.381 5.23 0.00 46.46 5.01
2044 2056 1.066454 CGTGGATGTACGATAGCACCA 59.934 52.381 0.00 0.00 46.46 4.17
2045 2057 2.470821 GTGGATGTACGATAGCACCAC 58.529 52.381 0.00 0.00 39.20 4.16
2046 2058 1.411246 TGGATGTACGATAGCACCACC 59.589 52.381 0.00 0.00 42.67 4.61
2047 2059 1.687123 GGATGTACGATAGCACCACCT 59.313 52.381 0.00 0.00 42.67 4.00
2048 2060 2.889045 GGATGTACGATAGCACCACCTA 59.111 50.000 0.00 0.00 42.67 3.08
2049 2061 3.510360 GGATGTACGATAGCACCACCTAT 59.490 47.826 0.00 0.00 42.67 2.57
2050 2062 4.380655 GGATGTACGATAGCACCACCTATC 60.381 50.000 0.00 0.00 40.05 2.08
2055 2067 3.027974 GATAGCACCACCTATCGGAAC 57.972 52.381 0.00 0.00 35.71 3.62
2056 2068 1.117150 TAGCACCACCTATCGGAACC 58.883 55.000 0.00 0.00 0.00 3.62
2057 2069 0.907704 AGCACCACCTATCGGAACCA 60.908 55.000 0.00 0.00 0.00 3.67
2058 2070 0.743345 GCACCACCTATCGGAACCAC 60.743 60.000 0.00 0.00 0.00 4.16
2059 2071 0.459585 CACCACCTATCGGAACCACG 60.460 60.000 0.00 0.00 0.00 4.94
2061 2073 0.179119 CCACCTATCGGAACCACGAC 60.179 60.000 0.00 0.00 46.64 4.34
2062 2074 0.528924 CACCTATCGGAACCACGACA 59.471 55.000 0.00 0.00 46.64 4.35
2063 2075 1.067425 CACCTATCGGAACCACGACAA 60.067 52.381 0.00 0.00 46.64 3.18
2064 2076 1.619827 ACCTATCGGAACCACGACAAA 59.380 47.619 0.00 0.00 46.64 2.83
2065 2077 2.037511 ACCTATCGGAACCACGACAAAA 59.962 45.455 0.00 0.00 46.64 2.44
2066 2078 3.068560 CCTATCGGAACCACGACAAAAA 58.931 45.455 0.00 0.00 46.64 1.94
2067 2079 3.120442 CCTATCGGAACCACGACAAAAAC 60.120 47.826 0.00 0.00 46.64 2.43
2068 2080 1.735386 TCGGAACCACGACAAAAACA 58.265 45.000 0.00 0.00 38.06 2.83
2069 2081 2.290464 TCGGAACCACGACAAAAACAT 58.710 42.857 0.00 0.00 38.06 2.71
2070 2082 2.683867 TCGGAACCACGACAAAAACATT 59.316 40.909 0.00 0.00 38.06 2.71
2071 2083 3.040099 CGGAACCACGACAAAAACATTC 58.960 45.455 0.00 0.00 35.47 2.67
2072 2084 3.040099 GGAACCACGACAAAAACATTCG 58.960 45.455 0.00 0.00 38.73 3.34
2073 2085 3.487879 GGAACCACGACAAAAACATTCGT 60.488 43.478 0.00 0.00 46.57 3.85
2078 2090 4.191662 ACGACAAAAACATTCGTGTCTC 57.808 40.909 0.00 0.00 44.05 3.36
2079 2091 3.001939 ACGACAAAAACATTCGTGTCTCC 59.998 43.478 0.00 0.00 44.05 3.71
2080 2092 3.001838 CGACAAAAACATTCGTGTCTCCA 59.998 43.478 0.00 0.00 38.57 3.86
2081 2093 4.495019 CGACAAAAACATTCGTGTCTCCAA 60.495 41.667 0.00 0.00 38.57 3.53
2082 2094 5.514274 ACAAAAACATTCGTGTCTCCAAT 57.486 34.783 0.00 0.00 0.00 3.16
2083 2095 5.901552 ACAAAAACATTCGTGTCTCCAATT 58.098 33.333 0.00 0.00 0.00 2.32
2084 2096 5.748152 ACAAAAACATTCGTGTCTCCAATTG 59.252 36.000 0.00 0.00 0.00 2.32
2085 2097 3.559238 AACATTCGTGTCTCCAATTGC 57.441 42.857 0.00 0.00 0.00 3.56
2086 2098 1.464608 ACATTCGTGTCTCCAATTGCG 59.535 47.619 0.00 0.00 0.00 4.85
2087 2099 1.464608 CATTCGTGTCTCCAATTGCGT 59.535 47.619 0.00 0.00 0.00 5.24
2088 2100 1.588674 TTCGTGTCTCCAATTGCGTT 58.411 45.000 0.00 0.00 0.00 4.84
2089 2101 1.588674 TCGTGTCTCCAATTGCGTTT 58.411 45.000 0.00 0.00 0.00 3.60
2090 2102 1.262950 TCGTGTCTCCAATTGCGTTTG 59.737 47.619 0.00 0.00 0.00 2.93
2091 2103 1.408422 GTGTCTCCAATTGCGTTTGC 58.592 50.000 0.00 0.00 43.20 3.68
2102 2114 3.092081 GCGTTTGCACACTCCAATC 57.908 52.632 0.87 0.00 42.15 2.67
2103 2115 0.387239 GCGTTTGCACACTCCAATCC 60.387 55.000 0.87 0.00 42.15 3.01
2104 2116 0.240945 CGTTTGCACACTCCAATCCC 59.759 55.000 0.87 0.00 0.00 3.85
2105 2117 1.327303 GTTTGCACACTCCAATCCCA 58.673 50.000 0.00 0.00 0.00 4.37
2106 2118 1.895131 GTTTGCACACTCCAATCCCAT 59.105 47.619 0.00 0.00 0.00 4.00
2107 2119 1.838112 TTGCACACTCCAATCCCATC 58.162 50.000 0.00 0.00 0.00 3.51
2108 2120 0.034186 TGCACACTCCAATCCCATCC 60.034 55.000 0.00 0.00 0.00 3.51
2109 2121 0.753111 GCACACTCCAATCCCATCCC 60.753 60.000 0.00 0.00 0.00 3.85
2110 2122 0.921896 CACACTCCAATCCCATCCCT 59.078 55.000 0.00 0.00 0.00 4.20
2111 2123 1.285962 CACACTCCAATCCCATCCCTT 59.714 52.381 0.00 0.00 0.00 3.95
2112 2124 2.003072 ACACTCCAATCCCATCCCTTT 58.997 47.619 0.00 0.00 0.00 3.11
2113 2125 3.053693 CACACTCCAATCCCATCCCTTTA 60.054 47.826 0.00 0.00 0.00 1.85
2114 2126 3.053619 ACACTCCAATCCCATCCCTTTAC 60.054 47.826 0.00 0.00 0.00 2.01
2115 2127 3.203040 CACTCCAATCCCATCCCTTTACT 59.797 47.826 0.00 0.00 0.00 2.24
2116 2128 3.858638 ACTCCAATCCCATCCCTTTACTT 59.141 43.478 0.00 0.00 0.00 2.24
2117 2129 4.294970 ACTCCAATCCCATCCCTTTACTTT 59.705 41.667 0.00 0.00 0.00 2.66
2118 2130 4.867086 TCCAATCCCATCCCTTTACTTTC 58.133 43.478 0.00 0.00 0.00 2.62
2119 2131 4.544152 TCCAATCCCATCCCTTTACTTTCT 59.456 41.667 0.00 0.00 0.00 2.52
2120 2132 5.016245 TCCAATCCCATCCCTTTACTTTCTT 59.984 40.000 0.00 0.00 0.00 2.52
2121 2133 5.127682 CCAATCCCATCCCTTTACTTTCTTG 59.872 44.000 0.00 0.00 0.00 3.02
2122 2134 3.697166 TCCCATCCCTTTACTTTCTTGC 58.303 45.455 0.00 0.00 0.00 4.01
2123 2135 3.075283 TCCCATCCCTTTACTTTCTTGCA 59.925 43.478 0.00 0.00 0.00 4.08
2124 2136 3.831911 CCCATCCCTTTACTTTCTTGCAA 59.168 43.478 0.00 0.00 0.00 4.08
2125 2137 4.082026 CCCATCCCTTTACTTTCTTGCAAG 60.082 45.833 20.81 20.81 0.00 4.01
2126 2138 4.524328 CCATCCCTTTACTTTCTTGCAAGT 59.476 41.667 25.19 10.16 40.28 3.16
2127 2139 5.011023 CCATCCCTTTACTTTCTTGCAAGTT 59.989 40.000 25.19 11.26 38.07 2.66
2128 2140 5.514274 TCCCTTTACTTTCTTGCAAGTTG 57.486 39.130 25.19 17.63 38.07 3.16
2129 2141 4.051237 CCCTTTACTTTCTTGCAAGTTGC 58.949 43.478 25.19 21.17 45.29 4.17
2143 2155 5.010249 GCAAGTTGCATGCTTTACTTTTC 57.990 39.130 22.90 14.00 44.26 2.29
2144 2156 4.375305 GCAAGTTGCATGCTTTACTTTTCG 60.375 41.667 22.90 13.53 44.26 3.46
2145 2157 3.308530 AGTTGCATGCTTTACTTTTCGC 58.691 40.909 20.33 0.00 0.00 4.70
2146 2158 3.004734 AGTTGCATGCTTTACTTTTCGCT 59.995 39.130 20.33 0.00 0.00 4.93
2147 2159 2.932498 TGCATGCTTTACTTTTCGCTG 58.068 42.857 20.33 0.00 0.00 5.18
2148 2160 1.650645 GCATGCTTTACTTTTCGCTGC 59.349 47.619 11.37 0.00 0.00 5.25
2149 2161 2.669391 GCATGCTTTACTTTTCGCTGCT 60.669 45.455 11.37 0.00 0.00 4.24
2150 2162 2.969443 TGCTTTACTTTTCGCTGCTC 57.031 45.000 0.00 0.00 0.00 4.26
2151 2163 2.217750 TGCTTTACTTTTCGCTGCTCA 58.782 42.857 0.00 0.00 0.00 4.26
2152 2164 2.813754 TGCTTTACTTTTCGCTGCTCAT 59.186 40.909 0.00 0.00 0.00 2.90
2153 2165 4.000325 TGCTTTACTTTTCGCTGCTCATA 59.000 39.130 0.00 0.00 0.00 2.15
2154 2166 4.635765 TGCTTTACTTTTCGCTGCTCATAT 59.364 37.500 0.00 0.00 0.00 1.78
2155 2167 5.815222 TGCTTTACTTTTCGCTGCTCATATA 59.185 36.000 0.00 0.00 0.00 0.86
2156 2168 6.130058 GCTTTACTTTTCGCTGCTCATATAC 58.870 40.000 0.00 0.00 0.00 1.47
2157 2169 6.598753 TTTACTTTTCGCTGCTCATATACC 57.401 37.500 0.00 0.00 0.00 2.73
2158 2170 3.467803 ACTTTTCGCTGCTCATATACCC 58.532 45.455 0.00 0.00 0.00 3.69
2159 2171 3.134804 ACTTTTCGCTGCTCATATACCCT 59.865 43.478 0.00 0.00 0.00 4.34
2160 2172 3.838244 TTTCGCTGCTCATATACCCTT 57.162 42.857 0.00 0.00 0.00 3.95
2161 2173 3.838244 TTCGCTGCTCATATACCCTTT 57.162 42.857 0.00 0.00 0.00 3.11
2162 2174 3.111853 TCGCTGCTCATATACCCTTTG 57.888 47.619 0.00 0.00 0.00 2.77
2163 2175 1.532868 CGCTGCTCATATACCCTTTGC 59.467 52.381 0.00 0.00 0.00 3.68
2164 2176 2.575532 GCTGCTCATATACCCTTTGCA 58.424 47.619 0.00 0.00 0.00 4.08
2165 2177 3.152341 GCTGCTCATATACCCTTTGCAT 58.848 45.455 0.00 0.00 0.00 3.96
2166 2178 3.057736 GCTGCTCATATACCCTTTGCATG 60.058 47.826 0.00 0.00 0.00 4.06
2167 2179 2.886523 TGCTCATATACCCTTTGCATGC 59.113 45.455 11.82 11.82 0.00 4.06
2168 2180 3.152341 GCTCATATACCCTTTGCATGCT 58.848 45.455 20.33 0.00 0.00 3.79
2169 2181 3.571401 GCTCATATACCCTTTGCATGCTT 59.429 43.478 20.33 0.00 0.00 3.91
2170 2182 4.558095 GCTCATATACCCTTTGCATGCTTG 60.558 45.833 20.33 8.60 0.00 4.01
2184 2196 5.138800 GCATGCTTGCTTGATTTGTATTG 57.861 39.130 16.80 0.00 45.77 1.90
2185 2197 4.628333 GCATGCTTGCTTGATTTGTATTGT 59.372 37.500 16.80 0.00 45.77 2.71
2186 2198 5.445407 GCATGCTTGCTTGATTTGTATTGTG 60.445 40.000 16.80 0.00 45.77 3.33
2187 2199 5.450592 TGCTTGCTTGATTTGTATTGTGA 57.549 34.783 0.00 0.00 0.00 3.58
2188 2200 5.840715 TGCTTGCTTGATTTGTATTGTGAA 58.159 33.333 0.00 0.00 0.00 3.18
2189 2201 6.457355 TGCTTGCTTGATTTGTATTGTGAAT 58.543 32.000 0.00 0.00 0.00 2.57
2190 2202 6.366604 TGCTTGCTTGATTTGTATTGTGAATG 59.633 34.615 0.00 0.00 0.00 2.67
2191 2203 6.183360 GCTTGCTTGATTTGTATTGTGAATGG 60.183 38.462 0.00 0.00 0.00 3.16
2192 2204 6.587206 TGCTTGATTTGTATTGTGAATGGA 57.413 33.333 0.00 0.00 0.00 3.41
2193 2205 7.172868 TGCTTGATTTGTATTGTGAATGGAT 57.827 32.000 0.00 0.00 0.00 3.41
2194 2206 8.291191 TGCTTGATTTGTATTGTGAATGGATA 57.709 30.769 0.00 0.00 0.00 2.59
2195 2207 8.747471 TGCTTGATTTGTATTGTGAATGGATAA 58.253 29.630 0.00 0.00 0.00 1.75
2196 2208 9.585099 GCTTGATTTGTATTGTGAATGGATAAA 57.415 29.630 0.00 0.00 0.00 1.40
2204 2216 9.407380 TGTATTGTGAATGGATAAACTTATGCT 57.593 29.630 3.13 0.00 33.27 3.79
2212 2224 9.952188 GAATGGATAAACTTATGCTTAAACTCC 57.048 33.333 3.13 0.00 33.27 3.85
2213 2225 9.474313 AATGGATAAACTTATGCTTAAACTCCA 57.526 29.630 3.13 0.00 33.27 3.86
2214 2226 8.276252 TGGATAAACTTATGCTTAAACTCCAC 57.724 34.615 3.13 0.00 33.27 4.02
2215 2227 7.338449 TGGATAAACTTATGCTTAAACTCCACC 59.662 37.037 3.13 0.00 33.27 4.61
2216 2228 7.556635 GGATAAACTTATGCTTAAACTCCACCT 59.443 37.037 0.00 0.00 0.00 4.00
2217 2229 9.609346 GATAAACTTATGCTTAAACTCCACCTA 57.391 33.333 0.00 0.00 0.00 3.08
2218 2230 9.969001 ATAAACTTATGCTTAAACTCCACCTAA 57.031 29.630 0.00 0.00 0.00 2.69
2219 2231 8.700439 AAACTTATGCTTAAACTCCACCTAAA 57.300 30.769 0.00 0.00 0.00 1.85
2220 2232 7.683437 ACTTATGCTTAAACTCCACCTAAAC 57.317 36.000 0.00 0.00 0.00 2.01
2221 2233 7.459234 ACTTATGCTTAAACTCCACCTAAACT 58.541 34.615 0.00 0.00 0.00 2.66
2222 2234 7.942894 ACTTATGCTTAAACTCCACCTAAACTT 59.057 33.333 0.00 0.00 0.00 2.66
2223 2235 6.575162 ATGCTTAAACTCCACCTAAACTTG 57.425 37.500 0.00 0.00 0.00 3.16
2224 2236 5.686753 TGCTTAAACTCCACCTAAACTTGA 58.313 37.500 0.00 0.00 0.00 3.02
2225 2237 6.123651 TGCTTAAACTCCACCTAAACTTGAA 58.876 36.000 0.00 0.00 0.00 2.69
2226 2238 6.603997 TGCTTAAACTCCACCTAAACTTGAAA 59.396 34.615 0.00 0.00 0.00 2.69
2227 2239 7.122948 TGCTTAAACTCCACCTAAACTTGAAAA 59.877 33.333 0.00 0.00 0.00 2.29
2228 2240 7.977293 GCTTAAACTCCACCTAAACTTGAAAAA 59.023 33.333 0.00 0.00 0.00 1.94
2229 2241 9.297586 CTTAAACTCCACCTAAACTTGAAAAAC 57.702 33.333 0.00 0.00 0.00 2.43
2230 2242 7.476540 AAACTCCACCTAAACTTGAAAAACT 57.523 32.000 0.00 0.00 0.00 2.66
2231 2243 7.476540 AACTCCACCTAAACTTGAAAAACTT 57.523 32.000 0.00 0.00 0.00 2.66
2232 2244 8.584063 AACTCCACCTAAACTTGAAAAACTTA 57.416 30.769 0.00 0.00 0.00 2.24
2233 2245 8.584063 ACTCCACCTAAACTTGAAAAACTTAA 57.416 30.769 0.00 0.00 0.00 1.85
2234 2246 9.027202 ACTCCACCTAAACTTGAAAAACTTAAA 57.973 29.630 0.00 0.00 0.00 1.52
2235 2247 9.863845 CTCCACCTAAACTTGAAAAACTTAAAA 57.136 29.630 0.00 0.00 0.00 1.52
2240 2252 9.967245 CCTAAACTTGAAAAACTTAAAAACTGC 57.033 29.630 0.00 0.00 0.00 4.40
2241 2253 9.967245 CTAAACTTGAAAAACTTAAAAACTGCC 57.033 29.630 0.00 0.00 0.00 4.85
2242 2254 7.971183 AACTTGAAAAACTTAAAAACTGCCA 57.029 28.000 0.00 0.00 0.00 4.92
2243 2255 7.971183 ACTTGAAAAACTTAAAAACTGCCAA 57.029 28.000 0.00 0.00 0.00 4.52
2244 2256 7.802738 ACTTGAAAAACTTAAAAACTGCCAAC 58.197 30.769 0.00 0.00 0.00 3.77
2245 2257 7.659799 ACTTGAAAAACTTAAAAACTGCCAACT 59.340 29.630 0.00 0.00 0.00 3.16
2246 2258 7.971183 TGAAAAACTTAAAAACTGCCAACTT 57.029 28.000 0.00 0.00 0.00 2.66
2247 2259 8.384607 TGAAAAACTTAAAAACTGCCAACTTT 57.615 26.923 0.00 0.00 0.00 2.66
2248 2260 8.286097 TGAAAAACTTAAAAACTGCCAACTTTG 58.714 29.630 0.00 0.00 0.00 2.77
2249 2261 7.737972 AAAACTTAAAAACTGCCAACTTTGT 57.262 28.000 0.00 0.00 0.00 2.83
2250 2262 6.720012 AACTTAAAAACTGCCAACTTTGTG 57.280 33.333 0.00 0.00 0.00 3.33
2251 2263 5.789521 ACTTAAAAACTGCCAACTTTGTGT 58.210 33.333 0.00 0.00 0.00 3.72
2252 2264 5.637387 ACTTAAAAACTGCCAACTTTGTGTG 59.363 36.000 0.00 0.00 0.00 3.82
2253 2265 3.676291 AAAACTGCCAACTTTGTGTGT 57.324 38.095 0.00 0.00 0.00 3.72
2254 2266 3.676291 AAACTGCCAACTTTGTGTGTT 57.324 38.095 0.00 0.00 0.00 3.32
2255 2267 2.652941 ACTGCCAACTTTGTGTGTTG 57.347 45.000 0.00 0.00 42.96 3.33
2256 2268 2.166829 ACTGCCAACTTTGTGTGTTGA 58.833 42.857 8.01 0.00 45.27 3.18
2257 2269 2.164219 ACTGCCAACTTTGTGTGTTGAG 59.836 45.455 8.01 2.04 45.27 3.02
2258 2270 1.476085 TGCCAACTTTGTGTGTTGAGG 59.524 47.619 8.01 0.00 45.27 3.86
2259 2271 1.202405 GCCAACTTTGTGTGTTGAGGG 60.202 52.381 8.01 0.00 45.27 4.30
2260 2272 2.099405 CCAACTTTGTGTGTTGAGGGT 58.901 47.619 8.01 0.00 45.27 4.34
2261 2273 2.099098 CCAACTTTGTGTGTTGAGGGTC 59.901 50.000 8.01 0.00 45.27 4.46
2262 2274 3.016736 CAACTTTGTGTGTTGAGGGTCT 58.983 45.455 0.00 0.00 45.27 3.85
2263 2275 2.643551 ACTTTGTGTGTTGAGGGTCTG 58.356 47.619 0.00 0.00 0.00 3.51
2264 2276 2.238646 ACTTTGTGTGTTGAGGGTCTGA 59.761 45.455 0.00 0.00 0.00 3.27
2265 2277 2.325583 TTGTGTGTTGAGGGTCTGAC 57.674 50.000 0.00 0.00 0.00 3.51
2266 2278 0.468226 TGTGTGTTGAGGGTCTGACC 59.532 55.000 18.65 18.65 37.60 4.02
2275 2287 2.365768 GGTCTGACCCCCTCCCTC 60.366 72.222 16.14 0.00 30.04 4.30
2276 2288 2.781406 GTCTGACCCCCTCCCTCT 59.219 66.667 0.00 0.00 0.00 3.69
2277 2289 1.591280 GGTCTGACCCCCTCCCTCTA 61.591 65.000 16.14 0.00 30.04 2.43
2278 2290 0.105913 GTCTGACCCCCTCCCTCTAG 60.106 65.000 0.00 0.00 0.00 2.43
2279 2291 0.254154 TCTGACCCCCTCCCTCTAGA 60.254 60.000 0.00 0.00 0.00 2.43
2280 2292 0.105913 CTGACCCCCTCCCTCTAGAC 60.106 65.000 0.00 0.00 0.00 2.59
2281 2293 0.854039 TGACCCCCTCCCTCTAGACA 60.854 60.000 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 7.757526 GTTTAAGCAAAACATTCCACCTTTTT 58.242 30.769 9.17 0.00 45.72 1.94
35 36 8.517878 CAATGATTTCACAGTCAAACTAGGAAT 58.482 33.333 0.00 0.00 0.00 3.01
100 101 1.463674 AAGAACTGGCCCTTATTGCG 58.536 50.000 0.00 0.00 0.00 4.85
105 106 3.430453 CCATCAAAAGAACTGGCCCTTA 58.570 45.455 0.00 0.00 0.00 2.69
106 107 2.250924 CCATCAAAAGAACTGGCCCTT 58.749 47.619 0.00 0.00 0.00 3.95
107 108 1.928868 CCATCAAAAGAACTGGCCCT 58.071 50.000 0.00 0.00 0.00 5.19
108 109 0.247460 GCCATCAAAAGAACTGGCCC 59.753 55.000 0.00 0.00 46.76 5.80
109 110 3.820595 GCCATCAAAAGAACTGGCC 57.179 52.632 0.00 0.00 46.76 5.36
111 112 5.248640 TCTAGAAGCCATCAAAAGAACTGG 58.751 41.667 0.00 0.00 0.00 4.00
112 113 6.808008 TTCTAGAAGCCATCAAAAGAACTG 57.192 37.500 0.00 0.00 0.00 3.16
113 114 9.171877 CTTATTCTAGAAGCCATCAAAAGAACT 57.828 33.333 11.53 0.00 30.94 3.01
114 115 7.912773 GCTTATTCTAGAAGCCATCAAAAGAAC 59.087 37.037 11.53 0.00 42.90 3.01
115 116 7.989826 GCTTATTCTAGAAGCCATCAAAAGAA 58.010 34.615 11.53 0.00 42.90 2.52
116 117 7.559590 GCTTATTCTAGAAGCCATCAAAAGA 57.440 36.000 11.53 0.00 42.90 2.52
126 127 8.065974 AGCCTTTTGCAGCTTATTCTAGAAGC 62.066 42.308 11.53 8.99 44.83 3.86
127 128 5.356470 AGCCTTTTGCAGCTTATTCTAGAAG 59.644 40.000 11.53 0.00 44.83 2.85
128 129 5.124457 CAGCCTTTTGCAGCTTATTCTAGAA 59.876 40.000 7.82 7.82 44.83 2.10
129 130 4.637534 CAGCCTTTTGCAGCTTATTCTAGA 59.362 41.667 0.00 0.00 44.83 2.43
130 131 4.918037 CAGCCTTTTGCAGCTTATTCTAG 58.082 43.478 0.00 0.00 44.83 2.43
131 132 4.970662 CAGCCTTTTGCAGCTTATTCTA 57.029 40.909 0.00 0.00 44.83 2.10
132 133 3.863142 CAGCCTTTTGCAGCTTATTCT 57.137 42.857 0.00 0.00 44.83 2.40
140 141 0.322816 TAGAGGGCAGCCTTTTGCAG 60.323 55.000 12.43 0.00 45.86 4.41
141 142 0.609131 GTAGAGGGCAGCCTTTTGCA 60.609 55.000 12.43 0.00 45.86 4.08
142 143 1.315981 GGTAGAGGGCAGCCTTTTGC 61.316 60.000 12.43 1.93 43.34 3.68
143 144 0.681243 GGGTAGAGGGCAGCCTTTTG 60.681 60.000 12.43 0.00 0.00 2.44
144 145 1.140134 TGGGTAGAGGGCAGCCTTTT 61.140 55.000 12.43 0.53 34.56 2.27
145 146 1.541368 TGGGTAGAGGGCAGCCTTT 60.541 57.895 12.43 0.00 34.56 3.11
146 147 1.997874 CTGGGTAGAGGGCAGCCTT 60.998 63.158 12.43 2.42 34.56 4.35
147 148 2.366167 CTGGGTAGAGGGCAGCCT 60.366 66.667 12.43 0.00 34.56 4.58
148 149 4.182433 GCTGGGTAGAGGGCAGCC 62.182 72.222 1.26 1.26 33.21 4.85
149 150 1.338136 TAAGCTGGGTAGAGGGCAGC 61.338 60.000 0.00 0.00 39.01 5.25
150 151 1.428869 ATAAGCTGGGTAGAGGGCAG 58.571 55.000 0.00 0.00 0.00 4.85
151 152 1.768870 GAATAAGCTGGGTAGAGGGCA 59.231 52.381 0.00 0.00 0.00 5.36
152 153 2.050918 AGAATAAGCTGGGTAGAGGGC 58.949 52.381 0.00 0.00 0.00 5.19
153 154 5.888982 TTTAGAATAAGCTGGGTAGAGGG 57.111 43.478 0.00 0.00 0.00 4.30
154 155 5.760743 GCTTTTAGAATAAGCTGGGTAGAGG 59.239 44.000 0.00 0.00 43.56 3.69
155 156 5.760743 GGCTTTTAGAATAAGCTGGGTAGAG 59.239 44.000 7.43 0.00 45.62 2.43
156 157 5.397559 GGGCTTTTAGAATAAGCTGGGTAGA 60.398 44.000 7.43 0.00 45.62 2.59
157 158 4.822350 GGGCTTTTAGAATAAGCTGGGTAG 59.178 45.833 7.43 0.00 45.62 3.18
158 159 4.228666 TGGGCTTTTAGAATAAGCTGGGTA 59.771 41.667 7.43 0.00 45.62 3.69
159 160 3.011257 TGGGCTTTTAGAATAAGCTGGGT 59.989 43.478 7.43 0.00 45.62 4.51
160 161 3.631250 TGGGCTTTTAGAATAAGCTGGG 58.369 45.455 7.43 0.00 45.62 4.45
161 162 4.142160 GGTTGGGCTTTTAGAATAAGCTGG 60.142 45.833 7.43 0.00 45.62 4.85
162 163 4.462483 TGGTTGGGCTTTTAGAATAAGCTG 59.538 41.667 7.43 0.00 45.62 4.24
163 164 4.672899 TGGTTGGGCTTTTAGAATAAGCT 58.327 39.130 7.43 0.00 45.62 3.74
164 165 5.400066 TTGGTTGGGCTTTTAGAATAAGC 57.600 39.130 0.00 0.00 45.61 3.09
165 166 8.846943 AATTTTGGTTGGGCTTTTAGAATAAG 57.153 30.769 0.00 0.00 0.00 1.73
166 167 9.634021 AAAATTTTGGTTGGGCTTTTAGAATAA 57.366 25.926 1.75 0.00 0.00 1.40
167 168 9.278978 GAAAATTTTGGTTGGGCTTTTAGAATA 57.721 29.630 8.47 0.00 0.00 1.75
168 169 7.998383 AGAAAATTTTGGTTGGGCTTTTAGAAT 59.002 29.630 8.47 0.00 0.00 2.40
169 170 7.342581 AGAAAATTTTGGTTGGGCTTTTAGAA 58.657 30.769 8.47 0.00 0.00 2.10
170 171 6.894682 AGAAAATTTTGGTTGGGCTTTTAGA 58.105 32.000 8.47 0.00 0.00 2.10
171 172 7.566760 AAGAAAATTTTGGTTGGGCTTTTAG 57.433 32.000 8.47 0.00 0.00 1.85
172 173 7.946381 AAAGAAAATTTTGGTTGGGCTTTTA 57.054 28.000 8.47 0.00 0.00 1.52
173 174 6.849085 AAAGAAAATTTTGGTTGGGCTTTT 57.151 29.167 8.47 0.00 0.00 2.27
174 175 6.849085 AAAAGAAAATTTTGGTTGGGCTTT 57.151 29.167 8.47 6.89 0.00 3.51
175 176 6.849085 AAAAAGAAAATTTTGGTTGGGCTT 57.151 29.167 8.47 0.70 31.55 4.35
176 177 7.342581 TCTAAAAAGAAAATTTTGGTTGGGCT 58.657 30.769 8.47 0.00 33.84 5.19
177 178 7.561021 TCTAAAAAGAAAATTTTGGTTGGGC 57.439 32.000 8.47 0.00 33.84 5.36
178 179 8.128582 GCTTCTAAAAAGAAAATTTTGGTTGGG 58.871 33.333 8.47 0.00 33.84 4.12
179 180 8.128582 GGCTTCTAAAAAGAAAATTTTGGTTGG 58.871 33.333 8.47 0.00 33.84 3.77
180 181 8.892723 AGGCTTCTAAAAAGAAAATTTTGGTTG 58.107 29.630 8.47 0.00 33.84 3.77
182 183 9.764363 CTAGGCTTCTAAAAAGAAAATTTTGGT 57.236 29.630 8.47 0.00 33.84 3.67
183 184 9.764363 ACTAGGCTTCTAAAAAGAAAATTTTGG 57.236 29.630 8.47 0.00 34.51 3.28
191 192 9.939802 CCTTAACTACTAGGCTTCTAAAAAGAA 57.060 33.333 0.00 0.00 0.00 2.52
204 205 6.806388 GCTAGTCTAGCCTTAACTACTAGG 57.194 45.833 19.57 0.00 45.95 3.02
218 219 6.868622 TCTTTTTAGAAGCCTGCTAGTCTAG 58.131 40.000 2.18 2.18 0.00 2.43
219 220 6.852420 TCTTTTTAGAAGCCTGCTAGTCTA 57.148 37.500 0.00 0.00 0.00 2.59
220 221 5.746990 TCTTTTTAGAAGCCTGCTAGTCT 57.253 39.130 0.00 0.00 0.00 3.24
221 222 6.803154 TTTCTTTTTAGAAGCCTGCTAGTC 57.197 37.500 0.00 0.00 0.00 2.59
222 223 7.767250 ATTTTCTTTTTAGAAGCCTGCTAGT 57.233 32.000 0.00 0.00 0.00 2.57
223 224 9.481340 AAAATTTTCTTTTTAGAAGCCTGCTAG 57.519 29.630 0.00 0.00 0.00 3.42
224 225 9.260002 CAAAATTTTCTTTTTAGAAGCCTGCTA 57.740 29.630 0.00 0.00 0.00 3.49
225 226 7.227314 CCAAAATTTTCTTTTTAGAAGCCTGCT 59.773 33.333 0.00 0.00 0.00 4.24
226 227 7.012327 ACCAAAATTTTCTTTTTAGAAGCCTGC 59.988 33.333 0.00 0.00 0.00 4.85
227 228 8.437360 ACCAAAATTTTCTTTTTAGAAGCCTG 57.563 30.769 0.00 0.00 0.00 4.85
228 229 8.892723 CAACCAAAATTTTCTTTTTAGAAGCCT 58.107 29.630 0.00 0.00 0.00 4.58
229 230 8.128582 CCAACCAAAATTTTCTTTTTAGAAGCC 58.871 33.333 0.00 0.00 0.00 4.35
230 231 8.128582 CCCAACCAAAATTTTCTTTTTAGAAGC 58.871 33.333 0.00 0.00 0.00 3.86
231 232 8.128582 GCCCAACCAAAATTTTCTTTTTAGAAG 58.871 33.333 0.00 0.00 0.00 2.85
232 233 7.831690 AGCCCAACCAAAATTTTCTTTTTAGAA 59.168 29.630 0.00 0.00 0.00 2.10
233 234 7.342581 AGCCCAACCAAAATTTTCTTTTTAGA 58.657 30.769 0.00 0.00 0.00 2.10
234 235 7.566760 AGCCCAACCAAAATTTTCTTTTTAG 57.433 32.000 0.00 0.00 0.00 1.85
235 236 7.831690 AGAAGCCCAACCAAAATTTTCTTTTTA 59.168 29.630 0.00 0.00 0.00 1.52
236 237 6.663093 AGAAGCCCAACCAAAATTTTCTTTTT 59.337 30.769 0.00 0.00 0.00 1.94
237 238 6.186957 AGAAGCCCAACCAAAATTTTCTTTT 58.813 32.000 0.00 0.00 0.00 2.27
238 239 5.754782 AGAAGCCCAACCAAAATTTTCTTT 58.245 33.333 0.00 0.00 0.00 2.52
239 240 5.372343 AGAAGCCCAACCAAAATTTTCTT 57.628 34.783 0.00 0.00 0.00 2.52
240 241 5.838521 TCTAGAAGCCCAACCAAAATTTTCT 59.161 36.000 0.00 0.00 0.00 2.52
241 242 6.096673 TCTAGAAGCCCAACCAAAATTTTC 57.903 37.500 0.00 0.00 0.00 2.29
242 243 6.493189 TTCTAGAAGCCCAACCAAAATTTT 57.507 33.333 0.00 0.00 0.00 1.82
243 244 6.686484 ATTCTAGAAGCCCAACCAAAATTT 57.314 33.333 11.53 0.00 0.00 1.82
244 245 7.579531 GCTTATTCTAGAAGCCCAACCAAAATT 60.580 37.037 11.53 0.00 42.90 1.82
245 246 6.127338 GCTTATTCTAGAAGCCCAACCAAAAT 60.127 38.462 11.53 0.00 42.90 1.82
246 247 5.185056 GCTTATTCTAGAAGCCCAACCAAAA 59.815 40.000 11.53 0.00 42.90 2.44
247 248 4.705023 GCTTATTCTAGAAGCCCAACCAAA 59.295 41.667 11.53 0.00 42.90 3.28
248 249 4.270008 GCTTATTCTAGAAGCCCAACCAA 58.730 43.478 11.53 0.00 42.90 3.67
249 250 3.886123 GCTTATTCTAGAAGCCCAACCA 58.114 45.455 11.53 0.00 42.90 3.67
257 258 5.337975 GCCCCTATCCAGCTTATTCTAGAAG 60.338 48.000 11.53 0.00 0.00 2.85
258 259 4.532521 GCCCCTATCCAGCTTATTCTAGAA 59.467 45.833 7.82 7.82 0.00 2.10
259 260 4.097418 GCCCCTATCCAGCTTATTCTAGA 58.903 47.826 0.00 0.00 0.00 2.43
260 261 3.840666 TGCCCCTATCCAGCTTATTCTAG 59.159 47.826 0.00 0.00 0.00 2.43
261 262 3.840666 CTGCCCCTATCCAGCTTATTCTA 59.159 47.826 0.00 0.00 0.00 2.10
262 263 2.641815 CTGCCCCTATCCAGCTTATTCT 59.358 50.000 0.00 0.00 0.00 2.40
263 264 3.064900 CTGCCCCTATCCAGCTTATTC 57.935 52.381 0.00 0.00 0.00 1.75
270 271 2.641815 AGAATAAGCTGCCCCTATCCAG 59.358 50.000 0.00 0.00 0.00 3.86
271 272 2.373169 CAGAATAAGCTGCCCCTATCCA 59.627 50.000 0.00 0.00 0.00 3.41
272 273 2.290577 CCAGAATAAGCTGCCCCTATCC 60.291 54.545 0.00 0.00 34.56 2.59
273 274 2.639839 TCCAGAATAAGCTGCCCCTATC 59.360 50.000 0.00 0.00 34.56 2.08
274 275 2.706350 TCCAGAATAAGCTGCCCCTAT 58.294 47.619 0.00 0.00 34.56 2.57
275 276 2.190398 TCCAGAATAAGCTGCCCCTA 57.810 50.000 0.00 0.00 34.56 3.53
276 277 1.213926 CTTCCAGAATAAGCTGCCCCT 59.786 52.381 0.00 0.00 34.56 4.79
277 278 1.685148 CTTCCAGAATAAGCTGCCCC 58.315 55.000 0.00 0.00 34.56 5.80
278 279 1.028130 GCTTCCAGAATAAGCTGCCC 58.972 55.000 0.00 0.00 44.75 5.36
279 280 1.028130 GGCTTCCAGAATAAGCTGCC 58.972 55.000 7.65 0.00 46.81 4.85
280 281 2.049888 AGGCTTCCAGAATAAGCTGC 57.950 50.000 7.65 0.00 46.81 5.25
281 282 6.515272 TTTTTAGGCTTCCAGAATAAGCTG 57.485 37.500 7.65 0.00 46.81 4.24
301 302 4.371786 GCCAGTTCTTTTGCTAGCTTTTT 58.628 39.130 17.23 0.00 0.00 1.94
302 303 3.243873 GGCCAGTTCTTTTGCTAGCTTTT 60.244 43.478 17.23 0.00 0.00 2.27
303 304 2.297315 GGCCAGTTCTTTTGCTAGCTTT 59.703 45.455 17.23 0.00 0.00 3.51
304 305 1.889170 GGCCAGTTCTTTTGCTAGCTT 59.111 47.619 17.23 0.00 0.00 3.74
305 306 1.539157 GGCCAGTTCTTTTGCTAGCT 58.461 50.000 17.23 0.00 0.00 3.32
306 307 0.528017 GGGCCAGTTCTTTTGCTAGC 59.472 55.000 8.10 8.10 0.00 3.42
307 308 2.206576 AGGGCCAGTTCTTTTGCTAG 57.793 50.000 6.18 0.00 0.00 3.42
308 309 3.329520 TCTTAGGGCCAGTTCTTTTGCTA 59.670 43.478 6.18 0.00 0.00 3.49
309 310 2.108250 TCTTAGGGCCAGTTCTTTTGCT 59.892 45.455 6.18 0.00 0.00 3.91
310 311 2.514803 TCTTAGGGCCAGTTCTTTTGC 58.485 47.619 6.18 0.00 0.00 3.68
311 312 6.122277 TGATATCTTAGGGCCAGTTCTTTTG 58.878 40.000 6.18 0.00 0.00 2.44
312 313 6.327386 TGATATCTTAGGGCCAGTTCTTTT 57.673 37.500 6.18 0.00 0.00 2.27
313 314 5.975988 TGATATCTTAGGGCCAGTTCTTT 57.024 39.130 6.18 0.00 0.00 2.52
314 315 5.688766 GCTTGATATCTTAGGGCCAGTTCTT 60.689 44.000 6.18 0.00 0.00 2.52
315 316 4.202409 GCTTGATATCTTAGGGCCAGTTCT 60.202 45.833 6.18 0.00 0.00 3.01
316 317 4.068599 GCTTGATATCTTAGGGCCAGTTC 58.931 47.826 6.18 0.00 0.00 3.01
317 318 3.181439 GGCTTGATATCTTAGGGCCAGTT 60.181 47.826 6.18 0.00 38.16 3.16
318 319 2.373502 GGCTTGATATCTTAGGGCCAGT 59.626 50.000 6.18 0.00 38.16 4.00
319 320 2.373169 TGGCTTGATATCTTAGGGCCAG 59.627 50.000 6.18 0.00 42.38 4.85
320 321 2.417652 TGGCTTGATATCTTAGGGCCA 58.582 47.619 6.18 17.05 44.55 5.36
321 322 3.728385 ATGGCTTGATATCTTAGGGCC 57.272 47.619 3.98 0.00 38.67 5.80
322 323 4.655963 TCAATGGCTTGATATCTTAGGGC 58.344 43.478 3.98 4.69 36.46 5.19
323 324 5.874093 ACTCAATGGCTTGATATCTTAGGG 58.126 41.667 3.98 0.00 40.52 3.53
324 325 8.908786 TTAACTCAATGGCTTGATATCTTAGG 57.091 34.615 3.98 0.00 40.52 2.69
325 326 8.997323 CCTTAACTCAATGGCTTGATATCTTAG 58.003 37.037 3.98 2.94 40.52 2.18
617 618 4.082787 CCATTTCAGTCGCAATACCTTTGT 60.083 41.667 0.00 0.00 0.00 2.83
893 896 6.480981 AGAGAATGTTTCTGCAAATTTTGTGG 59.519 34.615 10.65 4.52 40.87 4.17
958 962 9.339850 AGTGAATCTCATAATCTTCAATTCAGG 57.660 33.333 0.00 0.00 33.66 3.86
1925 1937 2.789409 AGCAACCTTGTCTATCCCAC 57.211 50.000 0.00 0.00 0.00 4.61
1926 1938 2.912956 AGAAGCAACCTTGTCTATCCCA 59.087 45.455 0.00 0.00 0.00 4.37
1927 1939 3.636153 AGAAGCAACCTTGTCTATCCC 57.364 47.619 0.00 0.00 0.00 3.85
1928 1940 4.579869 TGAAGAAGCAACCTTGTCTATCC 58.420 43.478 0.00 0.00 0.00 2.59
1929 1941 5.065731 CCATGAAGAAGCAACCTTGTCTATC 59.934 44.000 0.00 0.00 0.00 2.08
1930 1942 4.946157 CCATGAAGAAGCAACCTTGTCTAT 59.054 41.667 0.00 0.00 0.00 1.98
1931 1943 4.041567 TCCATGAAGAAGCAACCTTGTCTA 59.958 41.667 0.00 0.00 0.00 2.59
1932 1944 3.152341 CCATGAAGAAGCAACCTTGTCT 58.848 45.455 0.00 0.00 0.00 3.41
1933 1945 3.057946 GTCCATGAAGAAGCAACCTTGTC 60.058 47.826 0.00 0.00 0.00 3.18
1934 1946 2.887152 GTCCATGAAGAAGCAACCTTGT 59.113 45.455 0.00 0.00 0.00 3.16
1935 1947 2.229784 GGTCCATGAAGAAGCAACCTTG 59.770 50.000 0.00 0.00 0.00 3.61
1936 1948 2.519013 GGTCCATGAAGAAGCAACCTT 58.481 47.619 0.00 0.00 0.00 3.50
1937 1949 1.272147 GGGTCCATGAAGAAGCAACCT 60.272 52.381 0.00 0.00 0.00 3.50
1938 1950 1.177401 GGGTCCATGAAGAAGCAACC 58.823 55.000 0.00 0.00 0.00 3.77
1939 1951 2.206576 AGGGTCCATGAAGAAGCAAC 57.793 50.000 0.00 0.00 0.00 4.17
1940 1952 2.795329 GAAGGGTCCATGAAGAAGCAA 58.205 47.619 0.00 0.00 0.00 3.91
1941 1953 1.339055 CGAAGGGTCCATGAAGAAGCA 60.339 52.381 0.00 0.00 0.00 3.91
1942 1954 1.339151 ACGAAGGGTCCATGAAGAAGC 60.339 52.381 0.00 0.00 0.00 3.86
1943 1955 2.350522 CACGAAGGGTCCATGAAGAAG 58.649 52.381 0.00 0.00 0.00 2.85
1944 1956 1.003118 CCACGAAGGGTCCATGAAGAA 59.997 52.381 0.00 0.00 0.00 2.52
1945 1957 0.613260 CCACGAAGGGTCCATGAAGA 59.387 55.000 0.00 0.00 0.00 2.87
1946 1958 3.159298 CCACGAAGGGTCCATGAAG 57.841 57.895 0.00 0.00 0.00 3.02
1967 1979 1.076923 TGAGTCTACGGAGGGCTCC 60.077 63.158 14.63 0.00 46.18 4.70
1968 1980 1.716826 CGTGAGTCTACGGAGGGCTC 61.717 65.000 11.61 11.61 40.22 4.70
1969 1981 1.749638 CGTGAGTCTACGGAGGGCT 60.750 63.158 0.00 0.00 40.22 5.19
1970 1982 2.799371 CGTGAGTCTACGGAGGGC 59.201 66.667 0.00 0.00 40.22 5.19
1971 1983 2.044555 TGCGTGAGTCTACGGAGGG 61.045 63.158 14.17 0.00 43.87 4.30
1972 1984 3.587095 TGCGTGAGTCTACGGAGG 58.413 61.111 14.17 0.00 43.87 4.30
1974 1986 2.697761 GGCTGCGTGAGTCTACGGA 61.698 63.158 14.17 11.38 43.87 4.69
1975 1987 2.202623 GGCTGCGTGAGTCTACGG 60.203 66.667 14.17 1.01 43.87 4.02
1976 1988 2.577112 CGGCTGCGTGAGTCTACG 60.577 66.667 9.77 9.77 46.28 3.51
1977 1989 1.080705 AACGGCTGCGTGAGTCTAC 60.081 57.895 0.00 0.00 0.00 2.59
1978 1990 1.080772 CAACGGCTGCGTGAGTCTA 60.081 57.895 0.00 0.00 0.00 2.59
1979 1991 2.356313 CAACGGCTGCGTGAGTCT 60.356 61.111 0.00 0.00 0.00 3.24
1980 1992 4.077188 GCAACGGCTGCGTGAGTC 62.077 66.667 0.00 0.00 42.37 3.36
1988 2000 3.726517 CACGAAGGGCAACGGCTG 61.727 66.667 0.00 0.00 40.87 4.85
1998 2010 1.608283 GGAGACTTCAACCCACGAAGG 60.608 57.143 5.04 0.00 43.43 3.46
1999 2011 1.070134 TGGAGACTTCAACCCACGAAG 59.930 52.381 0.00 0.00 44.46 3.79
2000 2012 1.124780 TGGAGACTTCAACCCACGAA 58.875 50.000 0.00 0.00 0.00 3.85
2001 2013 1.275291 GATGGAGACTTCAACCCACGA 59.725 52.381 0.00 0.00 34.76 4.35
2002 2014 1.726853 GATGGAGACTTCAACCCACG 58.273 55.000 0.00 0.00 34.76 4.94
2003 2015 1.275291 TCGATGGAGACTTCAACCCAC 59.725 52.381 0.00 0.00 34.30 4.61
2004 2016 1.275291 GTCGATGGAGACTTCAACCCA 59.725 52.381 0.00 0.00 38.09 4.51
2005 2017 1.736032 CGTCGATGGAGACTTCAACCC 60.736 57.143 0.00 0.00 38.90 4.11
2006 2018 1.067776 ACGTCGATGGAGACTTCAACC 60.068 52.381 9.90 0.00 38.90 3.77
2007 2019 1.986378 CACGTCGATGGAGACTTCAAC 59.014 52.381 9.90 0.00 38.90 3.18
2008 2020 1.067846 CCACGTCGATGGAGACTTCAA 60.068 52.381 9.90 0.00 43.02 2.69
2009 2021 0.526211 CCACGTCGATGGAGACTTCA 59.474 55.000 9.90 0.00 43.02 3.02
2010 2022 0.809385 TCCACGTCGATGGAGACTTC 59.191 55.000 9.90 0.00 44.14 3.01
2011 2023 2.957060 TCCACGTCGATGGAGACTT 58.043 52.632 9.90 0.00 44.14 3.01
2012 2024 4.736739 TCCACGTCGATGGAGACT 57.263 55.556 9.90 0.00 44.14 3.24
2017 2029 0.379316 TCGTACATCCACGTCGATGG 59.621 55.000 24.11 9.30 43.34 3.51
2018 2030 2.401017 ATCGTACATCCACGTCGATG 57.599 50.000 19.84 19.84 44.38 3.84
2019 2031 2.095869 GCTATCGTACATCCACGTCGAT 60.096 50.000 10.33 10.33 42.51 3.59
2020 2032 1.262417 GCTATCGTACATCCACGTCGA 59.738 52.381 0.00 0.00 42.51 4.20
2021 2033 1.003223 TGCTATCGTACATCCACGTCG 60.003 52.381 0.00 0.00 42.51 5.12
2022 2034 2.382519 GTGCTATCGTACATCCACGTC 58.617 52.381 0.00 0.00 42.51 4.34
2023 2035 1.066605 GGTGCTATCGTACATCCACGT 59.933 52.381 0.00 0.00 42.51 4.49
2024 2036 1.066454 TGGTGCTATCGTACATCCACG 59.934 52.381 0.00 0.00 43.28 4.94
2025 2037 2.470821 GTGGTGCTATCGTACATCCAC 58.529 52.381 0.00 0.00 37.33 4.02
2026 2038 1.411246 GGTGGTGCTATCGTACATCCA 59.589 52.381 0.00 0.00 0.00 3.41
2027 2039 1.687123 AGGTGGTGCTATCGTACATCC 59.313 52.381 0.00 0.00 0.00 3.51
2028 2040 4.672024 CGATAGGTGGTGCTATCGTACATC 60.672 50.000 3.96 0.00 45.51 3.06
2029 2041 3.190744 CGATAGGTGGTGCTATCGTACAT 59.809 47.826 3.96 0.00 45.51 2.29
2030 2042 2.551032 CGATAGGTGGTGCTATCGTACA 59.449 50.000 3.96 0.00 45.51 2.90
2031 2043 3.198863 CGATAGGTGGTGCTATCGTAC 57.801 52.381 3.96 0.00 45.51 3.67
2046 2058 3.495377 TGTTTTTGTCGTGGTTCCGATAG 59.505 43.478 0.00 0.00 39.34 2.08
2047 2059 3.464907 TGTTTTTGTCGTGGTTCCGATA 58.535 40.909 0.00 0.00 39.34 2.92
2048 2060 2.290464 TGTTTTTGTCGTGGTTCCGAT 58.710 42.857 0.00 0.00 39.34 4.18
2049 2061 1.735386 TGTTTTTGTCGTGGTTCCGA 58.265 45.000 0.00 0.00 33.79 4.55
2050 2062 2.766970 ATGTTTTTGTCGTGGTTCCG 57.233 45.000 0.00 0.00 0.00 4.30
2051 2063 3.040099 CGAATGTTTTTGTCGTGGTTCC 58.960 45.455 0.00 0.00 0.00 3.62
2052 2064 3.687200 ACGAATGTTTTTGTCGTGGTTC 58.313 40.909 0.00 0.00 45.65 3.62
2053 2065 3.768468 ACGAATGTTTTTGTCGTGGTT 57.232 38.095 0.00 0.00 45.65 3.67
2058 2070 3.001838 TGGAGACACGAATGTTTTTGTCG 59.998 43.478 0.00 0.00 42.66 4.35
2059 2071 4.545823 TGGAGACACGAATGTTTTTGTC 57.454 40.909 0.00 0.00 39.95 3.18
2060 2072 4.974368 TTGGAGACACGAATGTTTTTGT 57.026 36.364 0.00 0.00 42.67 2.83
2061 2073 5.332506 GCAATTGGAGACACGAATGTTTTTG 60.333 40.000 7.72 0.00 42.67 2.44
2062 2074 4.744631 GCAATTGGAGACACGAATGTTTTT 59.255 37.500 7.72 0.00 42.67 1.94
2063 2075 4.298332 GCAATTGGAGACACGAATGTTTT 58.702 39.130 7.72 0.00 42.67 2.43
2064 2076 3.609175 CGCAATTGGAGACACGAATGTTT 60.609 43.478 7.72 0.00 42.67 2.83
2065 2077 2.095768 CGCAATTGGAGACACGAATGTT 60.096 45.455 7.72 0.00 42.67 2.71
2066 2078 1.464608 CGCAATTGGAGACACGAATGT 59.535 47.619 7.72 0.00 42.67 2.71
2067 2079 1.464608 ACGCAATTGGAGACACGAATG 59.535 47.619 7.72 0.00 42.67 2.67
2068 2080 1.808411 ACGCAATTGGAGACACGAAT 58.192 45.000 7.72 0.00 42.67 3.34
2069 2081 1.588674 AACGCAATTGGAGACACGAA 58.411 45.000 7.72 0.00 42.67 3.85
2070 2082 1.262950 CAAACGCAATTGGAGACACGA 59.737 47.619 7.72 0.00 42.67 4.35
2071 2083 1.673760 CAAACGCAATTGGAGACACG 58.326 50.000 7.72 3.48 42.67 4.49
2072 2084 1.268999 TGCAAACGCAATTGGAGACAC 60.269 47.619 7.72 0.00 36.75 3.67
2073 2085 1.028130 TGCAAACGCAATTGGAGACA 58.972 45.000 7.72 0.00 36.16 3.41
2074 2086 1.268999 TGTGCAAACGCAATTGGAGAC 60.269 47.619 7.72 0.00 42.17 3.36
2075 2087 1.028130 TGTGCAAACGCAATTGGAGA 58.972 45.000 7.72 0.00 42.17 3.71
2076 2088 1.130955 GTGTGCAAACGCAATTGGAG 58.869 50.000 7.72 0.00 42.17 3.86
2077 2089 0.743688 AGTGTGCAAACGCAATTGGA 59.256 45.000 7.72 0.00 42.17 3.53
2078 2090 1.130955 GAGTGTGCAAACGCAATTGG 58.869 50.000 5.81 0.00 42.17 3.16
2079 2091 1.130955 GGAGTGTGCAAACGCAATTG 58.869 50.000 13.11 0.00 42.17 2.32
2080 2092 0.743688 TGGAGTGTGCAAACGCAATT 59.256 45.000 13.11 0.00 42.17 2.32
2081 2093 0.743688 TTGGAGTGTGCAAACGCAAT 59.256 45.000 13.11 0.00 42.17 3.56
2082 2094 0.743688 ATTGGAGTGTGCAAACGCAA 59.256 45.000 13.11 0.00 42.17 4.85
2083 2095 0.310543 GATTGGAGTGTGCAAACGCA 59.689 50.000 13.11 0.00 36.95 5.24
2084 2096 0.387239 GGATTGGAGTGTGCAAACGC 60.387 55.000 1.48 1.48 29.75 4.84
2085 2097 0.240945 GGGATTGGAGTGTGCAAACG 59.759 55.000 0.16 0.00 29.75 3.60
2086 2098 1.327303 TGGGATTGGAGTGTGCAAAC 58.673 50.000 0.00 0.00 29.75 2.93
2087 2099 2.170166 GATGGGATTGGAGTGTGCAAA 58.830 47.619 0.00 0.00 29.75 3.68
2088 2100 1.616725 GGATGGGATTGGAGTGTGCAA 60.617 52.381 0.00 0.00 30.73 4.08
2089 2101 0.034186 GGATGGGATTGGAGTGTGCA 60.034 55.000 0.00 0.00 0.00 4.57
2090 2102 0.753111 GGGATGGGATTGGAGTGTGC 60.753 60.000 0.00 0.00 0.00 4.57
2091 2103 0.921896 AGGGATGGGATTGGAGTGTG 59.078 55.000 0.00 0.00 0.00 3.82
2092 2104 1.686236 AAGGGATGGGATTGGAGTGT 58.314 50.000 0.00 0.00 0.00 3.55
2093 2105 2.834638 AAAGGGATGGGATTGGAGTG 57.165 50.000 0.00 0.00 0.00 3.51
2094 2106 3.474920 AGTAAAGGGATGGGATTGGAGT 58.525 45.455 0.00 0.00 0.00 3.85
2095 2107 4.526438 AAGTAAAGGGATGGGATTGGAG 57.474 45.455 0.00 0.00 0.00 3.86
2096 2108 4.544152 AGAAAGTAAAGGGATGGGATTGGA 59.456 41.667 0.00 0.00 0.00 3.53
2097 2109 4.871822 AGAAAGTAAAGGGATGGGATTGG 58.128 43.478 0.00 0.00 0.00 3.16
2098 2110 5.394553 GCAAGAAAGTAAAGGGATGGGATTG 60.395 44.000 0.00 0.00 0.00 2.67
2099 2111 4.711846 GCAAGAAAGTAAAGGGATGGGATT 59.288 41.667 0.00 0.00 0.00 3.01
2100 2112 4.264352 TGCAAGAAAGTAAAGGGATGGGAT 60.264 41.667 0.00 0.00 0.00 3.85
2101 2113 3.075283 TGCAAGAAAGTAAAGGGATGGGA 59.925 43.478 0.00 0.00 0.00 4.37
2102 2114 3.430453 TGCAAGAAAGTAAAGGGATGGG 58.570 45.455 0.00 0.00 0.00 4.00
2103 2115 4.524328 ACTTGCAAGAAAGTAAAGGGATGG 59.476 41.667 32.50 0.97 38.62 3.51
2104 2116 5.712152 ACTTGCAAGAAAGTAAAGGGATG 57.288 39.130 32.50 1.38 38.62 3.51
2105 2117 5.509670 GCAACTTGCAAGAAAGTAAAGGGAT 60.510 40.000 32.50 2.30 44.26 3.85
2106 2118 4.202111 GCAACTTGCAAGAAAGTAAAGGGA 60.202 41.667 32.50 0.00 44.26 4.20
2107 2119 4.051237 GCAACTTGCAAGAAAGTAAAGGG 58.949 43.478 32.50 2.77 44.26 3.95
2121 2133 4.375305 CGAAAAGTAAAGCATGCAACTTGC 60.375 41.667 24.72 19.78 45.29 4.01
2122 2134 4.375305 GCGAAAAGTAAAGCATGCAACTTG 60.375 41.667 24.72 16.93 32.69 3.16
2123 2135 3.735746 GCGAAAAGTAAAGCATGCAACTT 59.264 39.130 21.98 21.26 33.72 2.66
2124 2136 3.004734 AGCGAAAAGTAAAGCATGCAACT 59.995 39.130 21.98 16.68 0.00 3.16
2125 2137 3.120121 CAGCGAAAAGTAAAGCATGCAAC 59.880 43.478 21.98 14.61 0.00 4.17
2126 2138 3.307674 CAGCGAAAAGTAAAGCATGCAA 58.692 40.909 21.98 1.32 0.00 4.08
2127 2139 2.921912 GCAGCGAAAAGTAAAGCATGCA 60.922 45.455 21.98 0.00 35.47 3.96
2128 2140 1.650645 GCAGCGAAAAGTAAAGCATGC 59.349 47.619 10.51 10.51 0.00 4.06
2129 2141 3.166657 GAGCAGCGAAAAGTAAAGCATG 58.833 45.455 0.00 0.00 0.00 4.06
2130 2142 2.813754 TGAGCAGCGAAAAGTAAAGCAT 59.186 40.909 0.00 0.00 0.00 3.79
2131 2143 2.217750 TGAGCAGCGAAAAGTAAAGCA 58.782 42.857 0.00 0.00 0.00 3.91
2132 2144 2.969443 TGAGCAGCGAAAAGTAAAGC 57.031 45.000 0.00 0.00 0.00 3.51
2133 2145 6.292919 GGGTATATGAGCAGCGAAAAGTAAAG 60.293 42.308 0.00 0.00 0.00 1.85
2134 2146 5.526111 GGGTATATGAGCAGCGAAAAGTAAA 59.474 40.000 0.00 0.00 0.00 2.01
2135 2147 5.054477 GGGTATATGAGCAGCGAAAAGTAA 58.946 41.667 0.00 0.00 0.00 2.24
2136 2148 4.344102 AGGGTATATGAGCAGCGAAAAGTA 59.656 41.667 0.00 0.00 0.00 2.24
2137 2149 3.134804 AGGGTATATGAGCAGCGAAAAGT 59.865 43.478 0.00 0.00 0.00 2.66
2138 2150 3.733337 AGGGTATATGAGCAGCGAAAAG 58.267 45.455 0.00 0.00 0.00 2.27
2139 2151 3.838244 AGGGTATATGAGCAGCGAAAA 57.162 42.857 0.00 0.00 0.00 2.29
2140 2152 3.838244 AAGGGTATATGAGCAGCGAAA 57.162 42.857 0.00 0.00 0.00 3.46
2141 2153 3.466836 CAAAGGGTATATGAGCAGCGAA 58.533 45.455 0.00 0.00 0.00 4.70
2142 2154 2.806745 GCAAAGGGTATATGAGCAGCGA 60.807 50.000 0.00 0.00 0.00 4.93
2143 2155 1.532868 GCAAAGGGTATATGAGCAGCG 59.467 52.381 0.00 0.00 0.00 5.18
2144 2156 2.575532 TGCAAAGGGTATATGAGCAGC 58.424 47.619 0.00 0.00 0.00 5.25
2145 2157 3.057736 GCATGCAAAGGGTATATGAGCAG 60.058 47.826 14.21 0.00 33.69 4.24
2146 2158 2.886523 GCATGCAAAGGGTATATGAGCA 59.113 45.455 14.21 0.00 34.78 4.26
2147 2159 3.152341 AGCATGCAAAGGGTATATGAGC 58.848 45.455 21.98 0.00 0.00 4.26
2148 2160 5.117355 CAAGCATGCAAAGGGTATATGAG 57.883 43.478 21.98 0.00 0.00 2.90
2163 2175 5.865013 TCACAATACAAATCAAGCAAGCATG 59.135 36.000 0.00 0.00 0.00 4.06
2164 2176 6.028146 TCACAATACAAATCAAGCAAGCAT 57.972 33.333 0.00 0.00 0.00 3.79
2165 2177 5.450592 TCACAATACAAATCAAGCAAGCA 57.549 34.783 0.00 0.00 0.00 3.91
2166 2178 6.183360 CCATTCACAATACAAATCAAGCAAGC 60.183 38.462 0.00 0.00 0.00 4.01
2167 2179 7.092079 TCCATTCACAATACAAATCAAGCAAG 58.908 34.615 0.00 0.00 0.00 4.01
2168 2180 6.990798 TCCATTCACAATACAAATCAAGCAA 58.009 32.000 0.00 0.00 0.00 3.91
2169 2181 6.587206 TCCATTCACAATACAAATCAAGCA 57.413 33.333 0.00 0.00 0.00 3.91
2170 2182 9.585099 TTTATCCATTCACAATACAAATCAAGC 57.415 29.630 0.00 0.00 0.00 4.01
2178 2190 9.407380 AGCATAAGTTTATCCATTCACAATACA 57.593 29.630 0.00 0.00 0.00 2.29
2186 2198 9.952188 GGAGTTTAAGCATAAGTTTATCCATTC 57.048 33.333 0.00 0.00 0.00 2.67
2187 2199 9.474313 TGGAGTTTAAGCATAAGTTTATCCATT 57.526 29.630 0.00 0.00 28.41 3.16
2188 2200 8.903820 GTGGAGTTTAAGCATAAGTTTATCCAT 58.096 33.333 0.00 0.00 32.99 3.41
2189 2201 7.338449 GGTGGAGTTTAAGCATAAGTTTATCCA 59.662 37.037 0.00 0.00 29.89 3.41
2190 2202 7.556635 AGGTGGAGTTTAAGCATAAGTTTATCC 59.443 37.037 0.00 0.00 0.00 2.59
2191 2203 8.507524 AGGTGGAGTTTAAGCATAAGTTTATC 57.492 34.615 0.00 0.00 0.00 1.75
2192 2204 9.969001 TTAGGTGGAGTTTAAGCATAAGTTTAT 57.031 29.630 0.00 0.00 0.00 1.40
2193 2205 9.796180 TTTAGGTGGAGTTTAAGCATAAGTTTA 57.204 29.630 0.00 0.00 0.00 2.01
2194 2206 8.573885 GTTTAGGTGGAGTTTAAGCATAAGTTT 58.426 33.333 0.00 0.00 0.00 2.66
2195 2207 7.942894 AGTTTAGGTGGAGTTTAAGCATAAGTT 59.057 33.333 0.00 0.00 0.00 2.66
2196 2208 7.459234 AGTTTAGGTGGAGTTTAAGCATAAGT 58.541 34.615 0.00 0.00 0.00 2.24
2197 2209 7.923414 AGTTTAGGTGGAGTTTAAGCATAAG 57.077 36.000 0.00 0.00 0.00 1.73
2198 2210 7.940137 TCAAGTTTAGGTGGAGTTTAAGCATAA 59.060 33.333 0.00 0.00 0.00 1.90
2199 2211 7.455058 TCAAGTTTAGGTGGAGTTTAAGCATA 58.545 34.615 0.00 0.00 0.00 3.14
2200 2212 6.303839 TCAAGTTTAGGTGGAGTTTAAGCAT 58.696 36.000 0.00 0.00 0.00 3.79
2201 2213 5.686753 TCAAGTTTAGGTGGAGTTTAAGCA 58.313 37.500 0.00 0.00 0.00 3.91
2202 2214 6.628919 TTCAAGTTTAGGTGGAGTTTAAGC 57.371 37.500 0.00 0.00 0.00 3.09
2203 2215 9.297586 GTTTTTCAAGTTTAGGTGGAGTTTAAG 57.702 33.333 0.00 0.00 0.00 1.85
2204 2216 9.027202 AGTTTTTCAAGTTTAGGTGGAGTTTAA 57.973 29.630 0.00 0.00 0.00 1.52
2205 2217 8.584063 AGTTTTTCAAGTTTAGGTGGAGTTTA 57.416 30.769 0.00 0.00 0.00 2.01
2206 2218 7.476540 AGTTTTTCAAGTTTAGGTGGAGTTT 57.523 32.000 0.00 0.00 0.00 2.66
2207 2219 7.476540 AAGTTTTTCAAGTTTAGGTGGAGTT 57.523 32.000 0.00 0.00 0.00 3.01
2208 2220 8.584063 TTAAGTTTTTCAAGTTTAGGTGGAGT 57.416 30.769 0.00 0.00 0.00 3.85
2209 2221 9.863845 TTTTAAGTTTTTCAAGTTTAGGTGGAG 57.136 29.630 0.00 0.00 0.00 3.86
2214 2226 9.967245 GCAGTTTTTAAGTTTTTCAAGTTTAGG 57.033 29.630 0.00 0.00 0.00 2.69
2215 2227 9.967245 GGCAGTTTTTAAGTTTTTCAAGTTTAG 57.033 29.630 0.00 0.00 0.00 1.85
2216 2228 9.490379 TGGCAGTTTTTAAGTTTTTCAAGTTTA 57.510 25.926 0.00 0.00 0.00 2.01
2217 2229 8.384607 TGGCAGTTTTTAAGTTTTTCAAGTTT 57.615 26.923 0.00 0.00 0.00 2.66
2218 2230 7.971183 TGGCAGTTTTTAAGTTTTTCAAGTT 57.029 28.000 0.00 0.00 0.00 2.66
2219 2231 7.659799 AGTTGGCAGTTTTTAAGTTTTTCAAGT 59.340 29.630 0.00 0.00 0.00 3.16
2220 2232 8.028540 AGTTGGCAGTTTTTAAGTTTTTCAAG 57.971 30.769 0.00 0.00 0.00 3.02
2221 2233 7.971183 AGTTGGCAGTTTTTAAGTTTTTCAA 57.029 28.000 0.00 0.00 0.00 2.69
2222 2234 7.971183 AAGTTGGCAGTTTTTAAGTTTTTCA 57.029 28.000 0.00 0.00 0.00 2.69
2223 2235 8.286800 ACAAAGTTGGCAGTTTTTAAGTTTTTC 58.713 29.630 0.00 0.00 0.00 2.29
2224 2236 8.073167 CACAAAGTTGGCAGTTTTTAAGTTTTT 58.927 29.630 0.00 0.00 0.00 1.94
2225 2237 7.227711 ACACAAAGTTGGCAGTTTTTAAGTTTT 59.772 29.630 0.00 0.00 0.00 2.43
2226 2238 6.708502 ACACAAAGTTGGCAGTTTTTAAGTTT 59.291 30.769 0.00 0.00 0.00 2.66
2227 2239 6.147000 CACACAAAGTTGGCAGTTTTTAAGTT 59.853 34.615 0.00 0.00 0.00 2.66
2228 2240 5.637387 CACACAAAGTTGGCAGTTTTTAAGT 59.363 36.000 0.00 0.00 0.00 2.24
2229 2241 5.637387 ACACACAAAGTTGGCAGTTTTTAAG 59.363 36.000 0.00 0.00 0.00 1.85
2230 2242 5.542779 ACACACAAAGTTGGCAGTTTTTAA 58.457 33.333 0.00 0.00 0.00 1.52
2231 2243 5.140747 ACACACAAAGTTGGCAGTTTTTA 57.859 34.783 0.00 0.00 0.00 1.52
2232 2244 4.001618 ACACACAAAGTTGGCAGTTTTT 57.998 36.364 0.00 0.00 0.00 1.94
2233 2245 3.676291 ACACACAAAGTTGGCAGTTTT 57.324 38.095 0.00 0.00 0.00 2.43
2234 2246 3.006323 TCAACACACAAAGTTGGCAGTTT 59.994 39.130 6.26 0.00 44.84 2.66
2235 2247 2.560542 TCAACACACAAAGTTGGCAGTT 59.439 40.909 6.26 0.00 44.84 3.16
2236 2248 2.164219 CTCAACACACAAAGTTGGCAGT 59.836 45.455 6.26 0.00 44.84 4.40
2237 2249 2.480073 CCTCAACACACAAAGTTGGCAG 60.480 50.000 6.26 0.00 44.84 4.85
2238 2250 1.476085 CCTCAACACACAAAGTTGGCA 59.524 47.619 6.26 0.00 44.84 4.92
2239 2251 1.202405 CCCTCAACACACAAAGTTGGC 60.202 52.381 6.26 0.00 44.84 4.52
2240 2252 2.099098 GACCCTCAACACACAAAGTTGG 59.901 50.000 6.26 0.00 44.84 3.77
2241 2253 3.016736 AGACCCTCAACACACAAAGTTG 58.983 45.455 0.00 0.00 45.82 3.16
2242 2254 3.016736 CAGACCCTCAACACACAAAGTT 58.983 45.455 0.00 0.00 0.00 2.66
2243 2255 2.238646 TCAGACCCTCAACACACAAAGT 59.761 45.455 0.00 0.00 0.00 2.66
2244 2256 2.614057 GTCAGACCCTCAACACACAAAG 59.386 50.000 0.00 0.00 0.00 2.77
2245 2257 2.639065 GTCAGACCCTCAACACACAAA 58.361 47.619 0.00 0.00 0.00 2.83
2246 2258 1.134220 GGTCAGACCCTCAACACACAA 60.134 52.381 8.65 0.00 30.04 3.33
2247 2259 0.468226 GGTCAGACCCTCAACACACA 59.532 55.000 8.65 0.00 30.04 3.72
2248 2260 3.307379 GGTCAGACCCTCAACACAC 57.693 57.895 8.65 0.00 30.04 3.82
2258 2270 1.591280 TAGAGGGAGGGGGTCAGACC 61.591 65.000 11.70 11.70 37.60 3.85
2259 2271 0.105913 CTAGAGGGAGGGGGTCAGAC 60.106 65.000 0.00 0.00 0.00 3.51
2260 2272 0.254154 TCTAGAGGGAGGGGGTCAGA 60.254 60.000 0.00 0.00 0.00 3.27
2261 2273 0.105913 GTCTAGAGGGAGGGGGTCAG 60.106 65.000 0.00 0.00 0.00 3.51
2262 2274 0.854039 TGTCTAGAGGGAGGGGGTCA 60.854 60.000 0.00 0.00 0.00 4.02
2263 2275 2.016762 TGTCTAGAGGGAGGGGGTC 58.983 63.158 0.00 0.00 0.00 4.46
2264 2276 4.307564 TGTCTAGAGGGAGGGGGT 57.692 61.111 0.00 0.00 0.00 4.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.