Multiple sequence alignment - TraesCS2B01G233900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G233900 chr2B 100.000 4118 0 0 1 4118 232415483 232411366 0.000000e+00 7605.0
1 TraesCS2B01G233900 chr2B 84.601 539 69 11 128 655 40938269 40937734 1.310000e-144 523.0
2 TraesCS2B01G233900 chr2B 95.200 125 6 0 1 125 313496814 313496938 9.030000e-47 198.0
3 TraesCS2B01G233900 chr2B 94.400 125 7 0 1 125 356216534 356216658 4.200000e-45 193.0
4 TraesCS2B01G233900 chr2B 94.400 125 7 0 1 125 386652932 386652808 4.200000e-45 193.0
5 TraesCS2B01G233900 chr2B 85.955 178 19 3 2383 2560 535566723 535566552 7.030000e-43 185.0
6 TraesCS2B01G233900 chr2D 92.472 3082 127 62 770 3815 164744070 164747082 0.000000e+00 4309.0
7 TraesCS2B01G233900 chr2D 85.316 538 67 9 128 655 590029095 590028560 2.800000e-151 545.0
8 TraesCS2B01G233900 chr2D 82.656 640 76 15 128 759 600313582 600312970 6.060000e-148 534.0
9 TraesCS2B01G233900 chr2D 81.395 645 83 17 125 760 582187013 582187629 3.700000e-135 492.0
10 TraesCS2B01G233900 chr2D 78.764 631 100 17 137 760 370956208 370956811 3.860000e-105 392.0
11 TraesCS2B01G233900 chr2D 88.341 223 22 3 3889 4108 605389947 605389726 8.780000e-67 265.0
12 TraesCS2B01G233900 chr2D 78.226 248 25 12 515 760 128361550 128361330 9.290000e-27 132.0
13 TraesCS2B01G233900 chr2A 92.752 1228 57 21 866 2089 185963692 185962493 0.000000e+00 1746.0
14 TraesCS2B01G233900 chr2A 91.556 1279 48 27 2180 3444 185962454 185961222 0.000000e+00 1709.0
15 TraesCS2B01G233900 chr2A 92.368 380 19 5 3437 3809 185961175 185960799 2.180000e-147 532.0
16 TraesCS2B01G233900 chr2A 94.737 95 4 1 791 885 185963981 185963888 3.320000e-31 147.0
17 TraesCS2B01G233900 chr2A 90.625 96 8 1 4014 4108 755108096 755108001 4.320000e-25 126.0
18 TraesCS2B01G233900 chr1D 86.940 536 62 6 125 652 222898203 222898738 2.740000e-166 595.0
19 TraesCS2B01G233900 chr1D 80.363 606 80 21 165 760 422286393 422285817 1.370000e-114 424.0
20 TraesCS2B01G233900 chr6D 85.900 539 67 5 125 655 311898374 311897837 2.150000e-157 566.0
21 TraesCS2B01G233900 chrUn 85.261 536 68 8 125 651 29714174 29714707 3.620000e-150 542.0
22 TraesCS2B01G233900 chr6B 84.944 538 69 8 128 655 154848341 154847806 6.060000e-148 534.0
23 TraesCS2B01G233900 chr6B 95.200 125 6 0 1 125 232437586 232437710 9.030000e-47 198.0
24 TraesCS2B01G233900 chr6B 88.350 103 11 1 659 760 154847829 154847727 5.590000e-24 122.0
25 TraesCS2B01G233900 chr4A 84.916 537 68 9 129 655 689191753 689191220 7.840000e-147 531.0
26 TraesCS2B01G233900 chr4A 78.505 642 89 20 125 759 690425195 690425794 3.890000e-100 375.0
27 TraesCS2B01G233900 chr3B 85.009 527 71 5 125 644 26433474 26433999 2.820000e-146 529.0
28 TraesCS2B01G233900 chr3B 86.996 223 25 3 3889 4108 795028413 795028192 8.840000e-62 248.0
29 TraesCS2B01G233900 chr1B 84.601 539 69 11 128 655 15234015 15233480 1.310000e-144 523.0
30 TraesCS2B01G233900 chr1B 94.400 125 7 0 1 125 480610179 480610303 4.200000e-45 193.0
31 TraesCS2B01G233900 chr1B 85.955 178 19 3 2383 2560 399621435 399621606 7.030000e-43 185.0
32 TraesCS2B01G233900 chr1B 84.264 197 21 5 2364 2560 327718241 327718427 2.530000e-42 183.0
33 TraesCS2B01G233900 chr5D 81.591 641 85 17 125 758 349856833 349857447 2.210000e-137 499.0
34 TraesCS2B01G233900 chr5B 80.680 647 87 17 125 763 625089400 625090016 6.230000e-128 468.0
35 TraesCS2B01G233900 chr5B 94.400 125 7 0 1 125 391216828 391216704 4.200000e-45 193.0
36 TraesCS2B01G233900 chr6A 80.190 631 89 17 139 760 2680545 2681148 1.360000e-119 440.0
37 TraesCS2B01G233900 chr6A 85.000 100 13 1 659 758 598256266 598256169 2.620000e-17 100.0
38 TraesCS2B01G233900 chr6A 85.000 100 13 1 659 758 598329551 598329454 2.620000e-17 100.0
39 TraesCS2B01G233900 chr6A 85.000 100 13 1 659 758 598389279 598389182 2.620000e-17 100.0
40 TraesCS2B01G233900 chr6A 84.000 100 14 1 659 758 598463651 598463554 1.220000e-15 95.3
41 TraesCS2B01G233900 chr7A 80.421 618 86 14 152 760 1364868 1365459 4.890000e-119 438.0
42 TraesCS2B01G233900 chr4B 79.167 648 91 21 128 760 672107303 672106685 3.830000e-110 409.0
43 TraesCS2B01G233900 chr4B 95.161 124 4 2 3 125 342523325 342523203 1.170000e-45 195.0
44 TraesCS2B01G233900 chr4B 94.400 125 7 0 1 125 319934981 319934857 4.200000e-45 193.0
45 TraesCS2B01G233900 chr4B 93.130 131 8 1 1 131 480273123 480272994 1.510000e-44 191.0
46 TraesCS2B01G233900 chr4B 84.772 197 20 5 2364 2560 287895948 287895762 5.430000e-44 189.0
47 TraesCS2B01G233900 chr1A 78.657 581 89 18 186 760 344497105 344496554 1.820000e-93 353.0
48 TraesCS2B01G233900 chr5A 80.000 400 43 16 370 761 85167633 85167263 1.140000e-65 261.0
49 TraesCS2B01G233900 chr5A 80.282 213 37 5 3893 4102 707876486 707876276 5.510000e-34 156.0
50 TraesCS2B01G233900 chr5A 86.792 106 11 3 674 777 384124453 384124349 9.350000e-22 115.0
51 TraesCS2B01G233900 chr7B 85.279 197 19 5 2364 2560 361982900 361982714 1.170000e-45 195.0
52 TraesCS2B01G233900 chr7B 84.264 197 21 6 2364 2560 389908744 389908558 2.530000e-42 183.0
53 TraesCS2B01G233900 chr3A 82.955 176 24 3 2385 2560 344049367 344049198 1.980000e-33 154.0
54 TraesCS2B01G233900 chr4D 78.713 202 37 6 3905 4102 400794321 400794122 3.340000e-26 130.0
55 TraesCS2B01G233900 chr4D 85.567 97 14 0 664 760 117405354 117405258 7.280000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G233900 chr2B 232411366 232415483 4117 True 7605.0 7605 100.00000 1 4118 1 chr2B.!!$R2 4117
1 TraesCS2B01G233900 chr2B 40937734 40938269 535 True 523.0 523 84.60100 128 655 1 chr2B.!!$R1 527
2 TraesCS2B01G233900 chr2D 164744070 164747082 3012 False 4309.0 4309 92.47200 770 3815 1 chr2D.!!$F1 3045
3 TraesCS2B01G233900 chr2D 590028560 590029095 535 True 545.0 545 85.31600 128 655 1 chr2D.!!$R2 527
4 TraesCS2B01G233900 chr2D 600312970 600313582 612 True 534.0 534 82.65600 128 759 1 chr2D.!!$R3 631
5 TraesCS2B01G233900 chr2D 582187013 582187629 616 False 492.0 492 81.39500 125 760 1 chr2D.!!$F3 635
6 TraesCS2B01G233900 chr2D 370956208 370956811 603 False 392.0 392 78.76400 137 760 1 chr2D.!!$F2 623
7 TraesCS2B01G233900 chr2A 185960799 185963981 3182 True 1033.5 1746 92.85325 791 3809 4 chr2A.!!$R2 3018
8 TraesCS2B01G233900 chr1D 222898203 222898738 535 False 595.0 595 86.94000 125 652 1 chr1D.!!$F1 527
9 TraesCS2B01G233900 chr1D 422285817 422286393 576 True 424.0 424 80.36300 165 760 1 chr1D.!!$R1 595
10 TraesCS2B01G233900 chr6D 311897837 311898374 537 True 566.0 566 85.90000 125 655 1 chr6D.!!$R1 530
11 TraesCS2B01G233900 chrUn 29714174 29714707 533 False 542.0 542 85.26100 125 651 1 chrUn.!!$F1 526
12 TraesCS2B01G233900 chr6B 154847727 154848341 614 True 328.0 534 86.64700 128 760 2 chr6B.!!$R1 632
13 TraesCS2B01G233900 chr4A 689191220 689191753 533 True 531.0 531 84.91600 129 655 1 chr4A.!!$R1 526
14 TraesCS2B01G233900 chr4A 690425195 690425794 599 False 375.0 375 78.50500 125 759 1 chr4A.!!$F1 634
15 TraesCS2B01G233900 chr3B 26433474 26433999 525 False 529.0 529 85.00900 125 644 1 chr3B.!!$F1 519
16 TraesCS2B01G233900 chr1B 15233480 15234015 535 True 523.0 523 84.60100 128 655 1 chr1B.!!$R1 527
17 TraesCS2B01G233900 chr5D 349856833 349857447 614 False 499.0 499 81.59100 125 758 1 chr5D.!!$F1 633
18 TraesCS2B01G233900 chr5B 625089400 625090016 616 False 468.0 468 80.68000 125 763 1 chr5B.!!$F1 638
19 TraesCS2B01G233900 chr6A 2680545 2681148 603 False 440.0 440 80.19000 139 760 1 chr6A.!!$F1 621
20 TraesCS2B01G233900 chr7A 1364868 1365459 591 False 438.0 438 80.42100 152 760 1 chr7A.!!$F1 608
21 TraesCS2B01G233900 chr4B 672106685 672107303 618 True 409.0 409 79.16700 128 760 1 chr4B.!!$R5 632
22 TraesCS2B01G233900 chr1A 344496554 344497105 551 True 353.0 353 78.65700 186 760 1 chr1A.!!$R1 574

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
123 124 0.034059 CCCATATCCAGGACGCTGAC 59.966 60.0 0.0 0.0 0.00 3.51 F
643 672 0.037790 GGCAAGCTCAGAGACGTTCT 60.038 55.0 0.0 0.0 36.25 3.01 F
1641 1893 0.957888 GCTCCTTTCTTTGCTCCGCT 60.958 55.0 0.0 0.0 0.00 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1058 1310 0.179184 GAACGAGGAGACGTCTGAGC 60.179 60.0 25.58 8.66 45.83 4.26 R
2487 2771 0.523072 ACTTTGATCACGCACATGCC 59.477 50.0 0.00 0.00 37.91 4.40 R
3268 3563 0.406361 AAAAGCACGGGGTGGGATAA 59.594 50.0 0.00 0.00 33.64 1.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.125912 CCTCGCGAGGGTCTTGTG 60.126 66.667 41.47 17.83 44.87 3.33
25 26 2.651361 CTCGCGAGGGTCTTGTGT 59.349 61.111 28.40 0.00 0.00 3.72
26 27 1.006102 CTCGCGAGGGTCTTGTGTT 60.006 57.895 28.40 0.00 0.00 3.32
27 28 1.284982 CTCGCGAGGGTCTTGTGTTG 61.285 60.000 28.40 0.00 0.00 3.33
28 29 1.594293 CGCGAGGGTCTTGTGTTGT 60.594 57.895 0.00 0.00 0.00 3.32
29 30 1.157870 CGCGAGGGTCTTGTGTTGTT 61.158 55.000 0.00 0.00 0.00 2.83
30 31 0.307760 GCGAGGGTCTTGTGTTGTTG 59.692 55.000 0.00 0.00 0.00 3.33
31 32 1.948104 CGAGGGTCTTGTGTTGTTGA 58.052 50.000 0.00 0.00 0.00 3.18
32 33 2.494059 CGAGGGTCTTGTGTTGTTGAT 58.506 47.619 0.00 0.00 0.00 2.57
33 34 2.224079 CGAGGGTCTTGTGTTGTTGATG 59.776 50.000 0.00 0.00 0.00 3.07
34 35 1.956477 AGGGTCTTGTGTTGTTGATGC 59.044 47.619 0.00 0.00 0.00 3.91
35 36 1.956477 GGGTCTTGTGTTGTTGATGCT 59.044 47.619 0.00 0.00 0.00 3.79
36 37 2.287788 GGGTCTTGTGTTGTTGATGCTG 60.288 50.000 0.00 0.00 0.00 4.41
37 38 2.618241 GGTCTTGTGTTGTTGATGCTGA 59.382 45.455 0.00 0.00 0.00 4.26
38 39 3.304257 GGTCTTGTGTTGTTGATGCTGAG 60.304 47.826 0.00 0.00 0.00 3.35
39 40 3.561310 GTCTTGTGTTGTTGATGCTGAGA 59.439 43.478 0.00 0.00 0.00 3.27
40 41 3.561310 TCTTGTGTTGTTGATGCTGAGAC 59.439 43.478 0.00 0.00 0.00 3.36
41 42 3.198409 TGTGTTGTTGATGCTGAGACT 57.802 42.857 0.00 0.00 0.00 3.24
42 43 2.874086 TGTGTTGTTGATGCTGAGACTG 59.126 45.455 0.00 0.00 0.00 3.51
43 44 2.225019 GTGTTGTTGATGCTGAGACTGG 59.775 50.000 0.00 0.00 0.00 4.00
44 45 1.808945 GTTGTTGATGCTGAGACTGGG 59.191 52.381 0.00 0.00 0.00 4.45
45 46 0.321919 TGTTGATGCTGAGACTGGGC 60.322 55.000 0.00 0.00 0.00 5.36
46 47 1.028868 GTTGATGCTGAGACTGGGCC 61.029 60.000 0.00 0.00 0.00 5.80
47 48 2.202987 GATGCTGAGACTGGGCCG 60.203 66.667 0.00 0.00 0.00 6.13
48 49 3.005539 ATGCTGAGACTGGGCCGT 61.006 61.111 0.00 0.00 0.00 5.68
49 50 1.676678 GATGCTGAGACTGGGCCGTA 61.677 60.000 0.00 0.00 0.00 4.02
50 51 1.961180 ATGCTGAGACTGGGCCGTAC 61.961 60.000 0.00 0.00 0.00 3.67
51 52 2.893398 CTGAGACTGGGCCGTACC 59.107 66.667 0.00 0.00 37.93 3.34
52 53 1.982395 CTGAGACTGGGCCGTACCA 60.982 63.158 0.00 1.22 42.05 3.25
53 54 1.534476 TGAGACTGGGCCGTACCAA 60.534 57.895 0.00 0.00 40.68 3.67
54 55 1.218316 GAGACTGGGCCGTACCAAG 59.782 63.158 0.00 0.00 46.42 3.61
55 56 2.436115 GACTGGGCCGTACCAAGC 60.436 66.667 0.00 0.00 44.55 4.01
56 57 3.971109 GACTGGGCCGTACCAAGCC 62.971 68.421 0.00 7.53 44.55 4.35
61 62 2.185867 GCCGTACCAAGCCATCGA 59.814 61.111 0.00 0.00 0.00 3.59
62 63 1.227556 GCCGTACCAAGCCATCGAT 60.228 57.895 0.00 0.00 0.00 3.59
63 64 1.498865 GCCGTACCAAGCCATCGATG 61.499 60.000 18.76 18.76 0.00 3.84
73 74 3.710044 CATCGATGGAGCCACGTG 58.290 61.111 17.96 9.08 0.00 4.49
74 75 1.884464 CATCGATGGAGCCACGTGG 60.884 63.158 30.66 30.66 38.53 4.94
75 76 2.359169 ATCGATGGAGCCACGTGGT 61.359 57.895 33.92 21.33 37.57 4.16
76 77 2.578163 ATCGATGGAGCCACGTGGTG 62.578 60.000 33.92 11.99 37.57 4.17
101 102 3.492353 GGCAGGCAGGGCTGGATA 61.492 66.667 22.19 0.00 0.00 2.59
102 103 2.203266 GCAGGCAGGGCTGGATAC 60.203 66.667 22.19 4.02 0.00 2.24
103 104 2.512896 CAGGCAGGGCTGGATACC 59.487 66.667 14.48 0.00 0.00 2.73
109 110 4.681624 GGGCTGGATACCCCCATA 57.318 61.111 0.00 0.00 44.38 2.74
110 111 3.120976 GGGCTGGATACCCCCATAT 57.879 57.895 0.00 0.00 44.38 1.78
111 112 0.919710 GGGCTGGATACCCCCATATC 59.080 60.000 0.00 0.00 44.38 1.63
116 117 2.661176 GGATACCCCCATATCCAGGA 57.339 55.000 6.90 0.00 46.94 3.86
117 118 2.197465 GGATACCCCCATATCCAGGAC 58.803 57.143 6.90 0.00 46.94 3.85
118 119 1.831736 GATACCCCCATATCCAGGACG 59.168 57.143 0.00 0.00 0.00 4.79
119 120 0.834687 TACCCCCATATCCAGGACGC 60.835 60.000 0.00 0.00 0.00 5.19
120 121 1.843376 CCCCCATATCCAGGACGCT 60.843 63.158 0.00 0.00 0.00 5.07
121 122 1.372683 CCCCATATCCAGGACGCTG 59.627 63.158 0.00 0.00 0.00 5.18
122 123 1.121407 CCCCATATCCAGGACGCTGA 61.121 60.000 0.00 0.00 0.00 4.26
123 124 0.034059 CCCATATCCAGGACGCTGAC 59.966 60.000 0.00 0.00 0.00 3.51
182 184 5.415221 GTGAAGGATCTGAAACCAGTCTAG 58.585 45.833 6.94 0.00 33.49 2.43
191 193 3.069016 TGAAACCAGTCTAGTCAAGCGAA 59.931 43.478 0.00 0.00 0.00 4.70
232 240 0.537143 TCCTTGTGGTGGACATGTGC 60.537 55.000 10.90 10.90 33.40 4.57
299 319 0.331954 AGCTTGGGAGGTAGTCGAGA 59.668 55.000 0.00 0.00 0.00 4.04
303 323 0.331954 TGGGAGGTAGTCGAGAAGCT 59.668 55.000 0.00 0.00 0.00 3.74
305 325 1.948834 GGGAGGTAGTCGAGAAGCTAC 59.051 57.143 3.03 3.03 37.45 3.58
313 333 5.178067 GGTAGTCGAGAAGCTACTACAGATC 59.822 48.000 20.14 4.72 43.75 2.75
411 436 3.072468 CCGGCGTCTTAGTGGGGA 61.072 66.667 6.01 0.00 0.00 4.81
490 518 2.030628 ACGGTAATGGTTTCGCTTTTGG 60.031 45.455 0.00 0.00 0.00 3.28
491 519 2.669950 CGGTAATGGTTTCGCTTTTGGG 60.670 50.000 0.00 0.00 0.00 4.12
498 526 1.178534 TTTCGCTTTTGGGGAGCCAG 61.179 55.000 0.00 0.00 38.14 4.85
515 543 1.613437 CCAGTTTGGAAGTCCGCAAAT 59.387 47.619 0.00 0.00 40.96 2.32
625 654 0.880278 CAGGTGACAGACGTTGGTGG 60.880 60.000 0.00 0.00 0.00 4.61
633 662 1.891919 GACGTTGGTGGCAAGCTCA 60.892 57.895 0.00 0.00 0.00 4.26
634 663 1.845809 GACGTTGGTGGCAAGCTCAG 61.846 60.000 0.00 0.00 0.00 3.35
635 664 1.597854 CGTTGGTGGCAAGCTCAGA 60.598 57.895 0.00 0.00 0.00 3.27
636 665 1.572085 CGTTGGTGGCAAGCTCAGAG 61.572 60.000 0.00 0.00 0.00 3.35
637 666 0.250467 GTTGGTGGCAAGCTCAGAGA 60.250 55.000 0.00 0.00 0.00 3.10
638 667 0.250467 TTGGTGGCAAGCTCAGAGAC 60.250 55.000 0.00 0.00 0.00 3.36
639 668 1.739562 GGTGGCAAGCTCAGAGACG 60.740 63.158 0.00 0.00 0.00 4.18
640 669 1.005630 GTGGCAAGCTCAGAGACGT 60.006 57.895 0.00 0.00 0.00 4.34
641 670 0.601311 GTGGCAAGCTCAGAGACGTT 60.601 55.000 0.00 0.00 0.00 3.99
642 671 0.319900 TGGCAAGCTCAGAGACGTTC 60.320 55.000 0.00 0.00 0.00 3.95
643 672 0.037790 GGCAAGCTCAGAGACGTTCT 60.038 55.000 0.00 0.00 36.25 3.01
655 684 5.671074 CAGAGACGTTCTGTTCTTTTAAGC 58.329 41.667 15.37 0.00 46.77 3.09
656 685 4.750598 AGAGACGTTCTGTTCTTTTAAGCC 59.249 41.667 0.00 0.00 33.93 4.35
657 686 4.704965 AGACGTTCTGTTCTTTTAAGCCT 58.295 39.130 0.00 0.00 0.00 4.58
717 746 7.007815 GTCGGTCTTTACGTGACTTATACTTTC 59.992 40.741 0.00 0.00 35.04 2.62
719 748 7.326789 CGGTCTTTACGTGACTTATACTTTCAA 59.673 37.037 0.00 0.00 35.04 2.69
798 833 8.155620 TCTTTACAGAGTAGGGAGTAGAGTAA 57.844 38.462 0.00 0.00 0.00 2.24
829 864 4.201851 CCAGGCGCGTACGTATATTATACT 60.202 45.833 17.90 0.19 42.83 2.12
832 867 5.580691 AGGCGCGTACGTATATTATACTGTA 59.419 40.000 17.90 11.21 42.83 2.74
1092 1344 3.611674 TTCCCGCTCACGCAGACA 61.612 61.111 0.00 0.00 38.22 3.41
1095 1347 2.661537 CCGCTCACGCAGACACAA 60.662 61.111 0.00 0.00 38.22 3.33
1641 1893 0.957888 GCTCCTTTCTTTGCTCCGCT 60.958 55.000 0.00 0.00 0.00 5.52
1644 1896 2.294512 CTCCTTTCTTTGCTCCGCTTTT 59.705 45.455 0.00 0.00 0.00 2.27
1645 1897 2.693074 TCCTTTCTTTGCTCCGCTTTTT 59.307 40.909 0.00 0.00 0.00 1.94
1646 1898 3.886505 TCCTTTCTTTGCTCCGCTTTTTA 59.113 39.130 0.00 0.00 0.00 1.52
1647 1899 4.339814 TCCTTTCTTTGCTCCGCTTTTTAA 59.660 37.500 0.00 0.00 0.00 1.52
1678 1930 1.725706 CAGCTTTCGTGCTCTTCTCTG 59.274 52.381 0.00 0.00 41.98 3.35
1710 1963 7.759489 AATTTGTGCTCTAAAATCTACCACA 57.241 32.000 0.00 0.00 0.00 4.17
1724 1977 7.862512 AATCTACCACAGAGTAGTACAGTAC 57.137 40.000 2.05 2.05 40.56 2.73
1771 2029 8.647143 TGATGAATTTCTGGTTTTCTTTTCAC 57.353 30.769 0.00 0.00 0.00 3.18
1787 2045 3.526931 TTCACTATCCTGAAGCTTCGG 57.473 47.619 25.74 25.74 0.00 4.30
1803 2061 3.306641 GCTTCGGCCTCTTCATGATAGAT 60.307 47.826 0.00 0.00 34.32 1.98
1804 2062 4.802248 GCTTCGGCCTCTTCATGATAGATT 60.802 45.833 0.00 0.00 34.32 2.40
1805 2063 5.567623 GCTTCGGCCTCTTCATGATAGATTA 60.568 44.000 0.00 0.00 34.32 1.75
1806 2064 5.392767 TCGGCCTCTTCATGATAGATTAC 57.607 43.478 0.00 0.00 0.00 1.89
1807 2065 5.080337 TCGGCCTCTTCATGATAGATTACT 58.920 41.667 0.00 0.00 0.00 2.24
1808 2066 6.246163 TCGGCCTCTTCATGATAGATTACTA 58.754 40.000 0.00 0.00 0.00 1.82
1809 2067 6.151312 TCGGCCTCTTCATGATAGATTACTAC 59.849 42.308 0.00 0.00 0.00 2.73
1812 2070 8.682710 GGCCTCTTCATGATAGATTACTACTAG 58.317 40.741 0.00 0.00 0.00 2.57
1924 2183 3.895232 TTTATCGAGCAGAAAGAGCCT 57.105 42.857 0.00 0.00 0.00 4.58
2089 2348 1.952102 AAGGCATTGCGCTCCCATTG 61.952 55.000 9.73 0.00 41.91 2.82
2090 2349 2.713967 GGCATTGCGCTCCCATTGT 61.714 57.895 9.73 0.00 41.91 2.71
2091 2350 1.517694 GCATTGCGCTCCCATTGTG 60.518 57.895 9.73 0.00 37.77 3.33
2092 2351 1.140161 CATTGCGCTCCCATTGTGG 59.860 57.895 9.73 0.00 37.25 4.17
2125 2395 9.911788 TTACTAGTAGTACTTAGCATTACCAGT 57.088 33.333 8.40 4.39 28.93 4.00
2126 2396 8.820153 ACTAGTAGTACTTAGCATTACCAGTT 57.180 34.615 8.40 0.00 0.00 3.16
2127 2397 9.911788 ACTAGTAGTACTTAGCATTACCAGTTA 57.088 33.333 8.40 0.00 0.00 2.24
2222 2492 2.027385 GGCCAGATTCTTGGTCCAATC 58.973 52.381 4.34 0.00 40.49 2.67
2231 2501 1.724148 TTGGTCCAATCCCACAGGCA 61.724 55.000 0.00 0.00 0.00 4.75
2298 2568 9.982291 TGCTACATCGAAAGTTGTTAATTATTC 57.018 29.630 0.00 0.00 40.93 1.75
2349 2631 2.157738 GCATCCTCATTGGCATCCTAC 58.842 52.381 0.00 0.00 35.26 3.18
2358 2640 3.500448 TTGGCATCCTACACTGAACAA 57.500 42.857 0.00 0.00 0.00 2.83
2366 2648 6.402983 GCATCCTACACTGAACAATGAAGAAG 60.403 42.308 0.00 0.00 0.00 2.85
2367 2649 5.551233 TCCTACACTGAACAATGAAGAAGG 58.449 41.667 0.00 0.00 0.00 3.46
2376 2658 3.222603 ACAATGAAGAAGGAACACACCC 58.777 45.455 0.00 0.00 0.00 4.61
2430 2713 7.965107 CAGTTCATGAATTTAGGAAGCTGTAAC 59.035 37.037 12.12 0.00 0.00 2.50
2487 2771 3.127895 AGAACAAGAAGATCGACTCGAGG 59.872 47.826 18.41 0.00 39.91 4.63
2496 2780 2.887568 GACTCGAGGGCATGTGCG 60.888 66.667 18.41 0.00 43.26 5.34
2502 2786 1.450134 GAGGGCATGTGCGTGATCA 60.450 57.895 0.00 0.00 43.26 2.92
2539 2823 4.141892 TGGGCAGCATTTATTGAGGATTTG 60.142 41.667 0.00 0.00 0.00 2.32
2696 2980 2.338500 GTTCGCTCTCCTTGAAATCGT 58.662 47.619 0.00 0.00 0.00 3.73
2697 2981 3.508762 GTTCGCTCTCCTTGAAATCGTA 58.491 45.455 0.00 0.00 0.00 3.43
2701 2985 3.181495 CGCTCTCCTTGAAATCGTAGAGT 60.181 47.826 0.00 0.00 43.63 3.24
2720 3004 2.152016 GTGAGGAGTTTAACCTGTGGC 58.848 52.381 0.00 0.00 37.93 5.01
3092 3382 1.954362 CTCTGCCTGGCGCTCTACTT 61.954 60.000 14.98 0.00 38.78 2.24
3167 3457 7.858879 GCTAAGCTTGTTGATAGAGTAGTACTC 59.141 40.741 20.73 20.73 45.38 2.59
3202 3496 2.178106 TGGTTGGTTGGTGTTAGGGATT 59.822 45.455 0.00 0.00 0.00 3.01
3203 3497 2.560981 GGTTGGTTGGTGTTAGGGATTG 59.439 50.000 0.00 0.00 0.00 2.67
3268 3563 1.496060 TTGCACCGGTGGATCTCTAT 58.504 50.000 34.58 0.00 0.00 1.98
3329 3628 3.612860 GCTACATTGGTGAAGTAGTCGTG 59.387 47.826 0.00 0.00 37.97 4.35
3419 3718 2.365582 GCGGGTATGGTGAATCTGTTT 58.634 47.619 0.00 0.00 0.00 2.83
3446 3798 3.380320 AGAAGAGTCGGTTTTTGGTTTGG 59.620 43.478 0.00 0.00 0.00 3.28
3512 3870 1.197430 AGGGCAGGTGAGGTGAAGAG 61.197 60.000 0.00 0.00 0.00 2.85
3513 3871 1.298014 GGCAGGTGAGGTGAAGAGG 59.702 63.158 0.00 0.00 0.00 3.69
3514 3872 1.194781 GGCAGGTGAGGTGAAGAGGA 61.195 60.000 0.00 0.00 0.00 3.71
3515 3873 0.687354 GCAGGTGAGGTGAAGAGGAA 59.313 55.000 0.00 0.00 0.00 3.36
3522 3880 2.107366 GAGGTGAAGAGGAAGAGGGAG 58.893 57.143 0.00 0.00 0.00 4.30
3525 3883 1.828595 GTGAAGAGGAAGAGGGAGGAC 59.171 57.143 0.00 0.00 0.00 3.85
3531 3889 1.378124 GGAAGAGGGAGGACGACGAG 61.378 65.000 0.00 0.00 0.00 4.18
3540 3898 3.139469 GACGACGAGGAGGGGGAC 61.139 72.222 0.00 0.00 0.00 4.46
3542 3900 4.790962 CGACGAGGAGGGGGACGA 62.791 72.222 0.00 0.00 0.00 4.20
3546 3904 0.908180 ACGAGGAGGGGGACGATTTT 60.908 55.000 0.00 0.00 0.00 1.82
3590 3948 0.321919 TGGTAGGTAGCGTCGTGTCT 60.322 55.000 0.00 0.00 0.00 3.41
3725 4087 0.742635 GTGTTGCCTCTGCTAGCTCC 60.743 60.000 17.23 0.26 38.71 4.70
3732 4094 0.667993 CTCTGCTAGCTCCTCTTCGG 59.332 60.000 17.23 0.00 0.00 4.30
3750 4117 4.684134 TTTCCCAGCCAGCCAGCC 62.684 66.667 0.00 0.00 0.00 4.85
3779 4146 5.640732 CCCAAGAAAGATGATAACCAAACG 58.359 41.667 0.00 0.00 0.00 3.60
3780 4147 5.183140 CCCAAGAAAGATGATAACCAAACGT 59.817 40.000 0.00 0.00 0.00 3.99
3781 4148 6.294508 CCCAAGAAAGATGATAACCAAACGTT 60.295 38.462 0.00 0.00 38.57 3.99
3782 4149 7.145323 CCAAGAAAGATGATAACCAAACGTTT 58.855 34.615 7.96 7.96 35.79 3.60
3783 4150 7.651704 CCAAGAAAGATGATAACCAAACGTTTT 59.348 33.333 11.66 0.00 35.79 2.43
3784 4151 9.030301 CAAGAAAGATGATAACCAAACGTTTTT 57.970 29.630 11.66 7.00 35.79 1.94
3815 4184 3.144506 CTCTCAGTGTCATTTTGCTGGT 58.855 45.455 0.00 0.00 0.00 4.00
3816 4185 3.554934 TCTCAGTGTCATTTTGCTGGTT 58.445 40.909 0.00 0.00 0.00 3.67
3817 4186 3.565482 TCTCAGTGTCATTTTGCTGGTTC 59.435 43.478 0.00 0.00 0.00 3.62
3818 4187 3.286353 TCAGTGTCATTTTGCTGGTTCA 58.714 40.909 0.00 0.00 0.00 3.18
3819 4188 3.316029 TCAGTGTCATTTTGCTGGTTCAG 59.684 43.478 0.00 0.00 34.12 3.02
3820 4189 3.067180 CAGTGTCATTTTGCTGGTTCAGT 59.933 43.478 0.00 0.00 33.43 3.41
3821 4190 3.316308 AGTGTCATTTTGCTGGTTCAGTC 59.684 43.478 0.00 0.00 33.43 3.51
3822 4191 2.290367 TGTCATTTTGCTGGTTCAGTCG 59.710 45.455 0.00 0.00 33.43 4.18
3823 4192 2.548057 GTCATTTTGCTGGTTCAGTCGA 59.452 45.455 0.00 0.00 33.43 4.20
3824 4193 2.807967 TCATTTTGCTGGTTCAGTCGAG 59.192 45.455 0.00 0.00 33.43 4.04
3825 4194 2.325583 TTTTGCTGGTTCAGTCGAGT 57.674 45.000 0.00 0.00 33.43 4.18
3826 4195 2.325583 TTTGCTGGTTCAGTCGAGTT 57.674 45.000 0.00 0.00 33.43 3.01
3827 4196 2.325583 TTGCTGGTTCAGTCGAGTTT 57.674 45.000 0.00 0.00 33.43 2.66
3828 4197 2.325583 TGCTGGTTCAGTCGAGTTTT 57.674 45.000 0.00 0.00 33.43 2.43
3829 4198 2.639065 TGCTGGTTCAGTCGAGTTTTT 58.361 42.857 0.00 0.00 33.43 1.94
3850 4219 4.806342 TTTCTCAAGTTAACCACGAAGC 57.194 40.909 0.88 0.00 0.00 3.86
3851 4220 2.762745 TCTCAAGTTAACCACGAAGCC 58.237 47.619 0.88 0.00 0.00 4.35
3852 4221 2.367567 TCTCAAGTTAACCACGAAGCCT 59.632 45.455 0.88 0.00 0.00 4.58
3853 4222 3.139077 CTCAAGTTAACCACGAAGCCTT 58.861 45.455 0.88 0.00 0.00 4.35
3854 4223 3.547746 TCAAGTTAACCACGAAGCCTTT 58.452 40.909 0.88 0.00 0.00 3.11
3855 4224 3.949113 TCAAGTTAACCACGAAGCCTTTT 59.051 39.130 0.88 0.00 0.00 2.27
3856 4225 5.124645 TCAAGTTAACCACGAAGCCTTTTA 58.875 37.500 0.88 0.00 0.00 1.52
3857 4226 5.766174 TCAAGTTAACCACGAAGCCTTTTAT 59.234 36.000 0.88 0.00 0.00 1.40
3858 4227 6.263617 TCAAGTTAACCACGAAGCCTTTTATT 59.736 34.615 0.88 0.00 0.00 1.40
3859 4228 6.644248 AGTTAACCACGAAGCCTTTTATTT 57.356 33.333 0.88 0.00 0.00 1.40
3860 4229 7.748691 AGTTAACCACGAAGCCTTTTATTTA 57.251 32.000 0.88 0.00 0.00 1.40
3861 4230 8.344446 AGTTAACCACGAAGCCTTTTATTTAT 57.656 30.769 0.88 0.00 0.00 1.40
3862 4231 8.456471 AGTTAACCACGAAGCCTTTTATTTATC 58.544 33.333 0.88 0.00 0.00 1.75
3863 4232 6.827586 AACCACGAAGCCTTTTATTTATCA 57.172 33.333 0.00 0.00 0.00 2.15
3864 4233 6.827586 ACCACGAAGCCTTTTATTTATCAA 57.172 33.333 0.00 0.00 0.00 2.57
3865 4234 7.404671 ACCACGAAGCCTTTTATTTATCAAT 57.595 32.000 0.00 0.00 0.00 2.57
3866 4235 8.514330 ACCACGAAGCCTTTTATTTATCAATA 57.486 30.769 0.00 0.00 0.00 1.90
3867 4236 8.403236 ACCACGAAGCCTTTTATTTATCAATAC 58.597 33.333 0.00 0.00 0.00 1.89
3868 4237 8.402472 CCACGAAGCCTTTTATTTATCAATACA 58.598 33.333 0.00 0.00 0.00 2.29
3869 4238 9.781834 CACGAAGCCTTTTATTTATCAATACAA 57.218 29.630 0.00 0.00 0.00 2.41
3883 4252 9.967451 TTTATCAATACAATCTCAGGGTTACAA 57.033 29.630 0.00 0.00 0.00 2.41
3885 4254 8.682936 ATCAATACAATCTCAGGGTTACAATC 57.317 34.615 0.00 0.00 0.00 2.67
3886 4255 7.054124 TCAATACAATCTCAGGGTTACAATCC 58.946 38.462 0.00 0.00 0.00 3.01
3887 4256 4.236527 ACAATCTCAGGGTTACAATCCC 57.763 45.455 0.00 0.00 44.90 3.85
3888 4257 3.591527 ACAATCTCAGGGTTACAATCCCA 59.408 43.478 3.79 0.00 46.82 4.37
3889 4258 4.202441 CAATCTCAGGGTTACAATCCCAG 58.798 47.826 3.79 0.00 46.82 4.45
3890 4259 2.196595 TCTCAGGGTTACAATCCCAGG 58.803 52.381 3.79 0.00 46.82 4.45
3891 4260 2.196595 CTCAGGGTTACAATCCCAGGA 58.803 52.381 3.79 0.00 46.82 3.86
3892 4261 2.576191 CTCAGGGTTACAATCCCAGGAA 59.424 50.000 3.79 0.00 46.82 3.36
3893 4262 2.990284 TCAGGGTTACAATCCCAGGAAA 59.010 45.455 3.79 0.00 46.82 3.13
3894 4263 3.010138 TCAGGGTTACAATCCCAGGAAAG 59.990 47.826 3.79 0.00 46.82 2.62
3895 4264 2.311841 AGGGTTACAATCCCAGGAAAGG 59.688 50.000 3.79 0.00 46.82 3.11
3896 4265 2.042569 GGGTTACAATCCCAGGAAAGGT 59.957 50.000 0.00 0.00 44.05 3.50
3897 4266 3.267551 GGGTTACAATCCCAGGAAAGGTA 59.732 47.826 0.00 0.00 44.05 3.08
3898 4267 4.264038 GGGTTACAATCCCAGGAAAGGTAA 60.264 45.833 0.00 0.00 44.05 2.85
3899 4268 4.703575 GGTTACAATCCCAGGAAAGGTAAC 59.296 45.833 19.79 19.79 37.73 2.50
3900 4269 3.067684 ACAATCCCAGGAAAGGTAACG 57.932 47.619 0.00 0.00 46.39 3.18
3901 4270 2.290705 ACAATCCCAGGAAAGGTAACGG 60.291 50.000 0.00 0.00 46.39 4.44
3902 4271 0.916809 ATCCCAGGAAAGGTAACGGG 59.083 55.000 0.00 0.00 46.39 5.28
3903 4272 0.474273 TCCCAGGAAAGGTAACGGGT 60.474 55.000 0.00 0.00 46.39 5.28
3904 4273 0.402887 CCCAGGAAAGGTAACGGGTT 59.597 55.000 0.00 0.00 46.39 4.11
3905 4274 1.530323 CCAGGAAAGGTAACGGGTTG 58.470 55.000 0.00 0.00 46.39 3.77
3906 4275 1.530323 CAGGAAAGGTAACGGGTTGG 58.470 55.000 0.00 0.00 46.39 3.77
3907 4276 1.072648 CAGGAAAGGTAACGGGTTGGA 59.927 52.381 0.00 0.00 46.39 3.53
3908 4277 1.776063 AGGAAAGGTAACGGGTTGGAA 59.224 47.619 0.00 0.00 46.39 3.53
3909 4278 2.175284 AGGAAAGGTAACGGGTTGGAAA 59.825 45.455 0.00 0.00 46.39 3.13
3910 4279 2.555325 GGAAAGGTAACGGGTTGGAAAG 59.445 50.000 0.00 0.00 46.39 2.62
3911 4280 2.281539 AAGGTAACGGGTTGGAAAGG 57.718 50.000 0.00 0.00 46.39 3.11
3912 4281 1.437397 AGGTAACGGGTTGGAAAGGA 58.563 50.000 0.00 0.00 46.39 3.36
3913 4282 1.072806 AGGTAACGGGTTGGAAAGGAC 59.927 52.381 0.00 0.00 46.39 3.85
3914 4283 1.202794 GGTAACGGGTTGGAAAGGACA 60.203 52.381 0.00 0.00 0.00 4.02
3915 4284 2.574450 GTAACGGGTTGGAAAGGACAA 58.426 47.619 0.00 0.00 0.00 3.18
3916 4285 1.687563 AACGGGTTGGAAAGGACAAG 58.312 50.000 0.00 0.00 0.00 3.16
3917 4286 0.179001 ACGGGTTGGAAAGGACAAGG 60.179 55.000 0.00 0.00 0.00 3.61
3918 4287 0.179001 CGGGTTGGAAAGGACAAGGT 60.179 55.000 0.00 0.00 0.00 3.50
3919 4288 1.617322 GGGTTGGAAAGGACAAGGTC 58.383 55.000 0.00 0.00 0.00 3.85
3920 4289 1.145119 GGGTTGGAAAGGACAAGGTCT 59.855 52.381 0.00 0.00 32.47 3.85
3921 4290 2.374170 GGGTTGGAAAGGACAAGGTCTA 59.626 50.000 0.00 0.00 32.47 2.59
3922 4291 3.010250 GGGTTGGAAAGGACAAGGTCTAT 59.990 47.826 0.00 0.00 32.47 1.98
3923 4292 4.262617 GGTTGGAAAGGACAAGGTCTATC 58.737 47.826 0.00 0.00 32.47 2.08
3924 4293 4.263331 GGTTGGAAAGGACAAGGTCTATCA 60.263 45.833 0.00 0.00 32.47 2.15
3925 4294 5.313712 GTTGGAAAGGACAAGGTCTATCAA 58.686 41.667 0.00 0.00 32.47 2.57
3926 4295 5.576563 TGGAAAGGACAAGGTCTATCAAA 57.423 39.130 0.00 0.00 32.47 2.69
3927 4296 5.560724 TGGAAAGGACAAGGTCTATCAAAG 58.439 41.667 0.00 0.00 32.47 2.77
3928 4297 5.309543 TGGAAAGGACAAGGTCTATCAAAGA 59.690 40.000 0.00 0.00 32.47 2.52
3929 4298 6.183361 TGGAAAGGACAAGGTCTATCAAAGAA 60.183 38.462 0.00 0.00 35.47 2.52
3930 4299 6.372937 GGAAAGGACAAGGTCTATCAAAGAAG 59.627 42.308 0.00 0.00 35.47 2.85
3931 4300 5.428184 AGGACAAGGTCTATCAAAGAAGG 57.572 43.478 0.00 0.00 35.47 3.46
3932 4301 3.942115 GGACAAGGTCTATCAAAGAAGGC 59.058 47.826 0.00 0.00 35.47 4.35
3933 4302 3.942115 GACAAGGTCTATCAAAGAAGGCC 59.058 47.826 0.00 0.00 37.79 5.19
3934 4303 3.330701 ACAAGGTCTATCAAAGAAGGCCA 59.669 43.478 5.01 0.00 40.11 5.36
3935 4304 3.922171 AGGTCTATCAAAGAAGGCCAG 57.078 47.619 5.01 0.00 40.11 4.85
3936 4305 3.454858 AGGTCTATCAAAGAAGGCCAGA 58.545 45.455 5.01 0.00 40.11 3.86
3937 4306 3.454082 AGGTCTATCAAAGAAGGCCAGAG 59.546 47.826 5.01 0.00 40.11 3.35
3938 4307 3.452627 GGTCTATCAAAGAAGGCCAGAGA 59.547 47.826 5.01 0.00 37.44 3.10
3939 4308 4.080863 GGTCTATCAAAGAAGGCCAGAGAA 60.081 45.833 5.01 0.00 37.44 2.87
3940 4309 5.115480 GTCTATCAAAGAAGGCCAGAGAAG 58.885 45.833 5.01 0.00 35.47 2.85
3941 4310 4.780021 TCTATCAAAGAAGGCCAGAGAAGT 59.220 41.667 5.01 0.00 0.00 3.01
3942 4311 3.131709 TCAAAGAAGGCCAGAGAAGTG 57.868 47.619 5.01 0.00 0.00 3.16
3943 4312 1.538950 CAAAGAAGGCCAGAGAAGTGC 59.461 52.381 5.01 0.00 0.00 4.40
3944 4313 1.063183 AAGAAGGCCAGAGAAGTGCT 58.937 50.000 5.01 0.00 0.00 4.40
3945 4314 1.063183 AGAAGGCCAGAGAAGTGCTT 58.937 50.000 5.01 0.00 0.00 3.91
3946 4315 1.163554 GAAGGCCAGAGAAGTGCTTG 58.836 55.000 5.01 0.00 0.00 4.01
3947 4316 0.475906 AAGGCCAGAGAAGTGCTTGT 59.524 50.000 5.01 0.00 0.00 3.16
3948 4317 0.250640 AGGCCAGAGAAGTGCTTGTG 60.251 55.000 5.01 0.00 0.00 3.33
3949 4318 0.250467 GGCCAGAGAAGTGCTTGTGA 60.250 55.000 0.00 0.00 0.00 3.58
3950 4319 1.597742 GCCAGAGAAGTGCTTGTGAA 58.402 50.000 0.00 0.00 0.00 3.18
3951 4320 2.157738 GCCAGAGAAGTGCTTGTGAAT 58.842 47.619 0.00 0.00 0.00 2.57
3952 4321 2.555757 GCCAGAGAAGTGCTTGTGAATT 59.444 45.455 0.00 0.00 0.00 2.17
3953 4322 3.365767 GCCAGAGAAGTGCTTGTGAATTC 60.366 47.826 0.00 0.00 0.00 2.17
3954 4323 4.070716 CCAGAGAAGTGCTTGTGAATTCT 58.929 43.478 7.05 0.00 33.07 2.40
3955 4324 4.083431 CCAGAGAAGTGCTTGTGAATTCTG 60.083 45.833 7.05 0.00 30.62 3.02
3956 4325 4.514441 CAGAGAAGTGCTTGTGAATTCTGT 59.486 41.667 7.05 0.00 30.62 3.41
3957 4326 5.008415 CAGAGAAGTGCTTGTGAATTCTGTT 59.992 40.000 7.05 0.00 30.62 3.16
3958 4327 5.238214 AGAGAAGTGCTTGTGAATTCTGTTC 59.762 40.000 7.05 0.00 30.62 3.18
3959 4328 5.128919 AGAAGTGCTTGTGAATTCTGTTCT 58.871 37.500 7.05 1.29 0.00 3.01
3960 4329 5.591877 AGAAGTGCTTGTGAATTCTGTTCTT 59.408 36.000 7.05 2.93 0.00 2.52
3961 4330 5.429957 AGTGCTTGTGAATTCTGTTCTTC 57.570 39.130 7.05 0.00 0.00 2.87
3962 4331 4.883585 AGTGCTTGTGAATTCTGTTCTTCA 59.116 37.500 7.05 0.00 0.00 3.02
3963 4332 5.008415 AGTGCTTGTGAATTCTGTTCTTCAG 59.992 40.000 7.05 0.00 44.85 3.02
3964 4333 4.276678 TGCTTGTGAATTCTGTTCTTCAGG 59.723 41.667 7.05 0.00 43.76 3.86
3965 4334 4.276926 GCTTGTGAATTCTGTTCTTCAGGT 59.723 41.667 7.05 0.00 43.76 4.00
3966 4335 5.221126 GCTTGTGAATTCTGTTCTTCAGGTT 60.221 40.000 7.05 0.00 43.76 3.50
3967 4336 6.017109 GCTTGTGAATTCTGTTCTTCAGGTTA 60.017 38.462 7.05 0.00 43.76 2.85
3968 4337 6.861065 TGTGAATTCTGTTCTTCAGGTTAC 57.139 37.500 7.05 0.00 43.76 2.50
3969 4338 6.353323 TGTGAATTCTGTTCTTCAGGTTACA 58.647 36.000 7.05 0.00 43.76 2.41
3970 4339 6.260050 TGTGAATTCTGTTCTTCAGGTTACAC 59.740 38.462 7.05 0.00 43.76 2.90
3971 4340 5.763204 TGAATTCTGTTCTTCAGGTTACACC 59.237 40.000 7.05 0.00 43.76 4.16
3985 4354 5.508200 GGTTACACCTACTCTCTCATGAG 57.492 47.826 17.07 17.07 37.17 2.90
3987 4356 5.419471 GGTTACACCTACTCTCTCATGAGTT 59.581 44.000 21.92 8.12 45.44 3.01
3988 4357 6.326375 GTTACACCTACTCTCTCATGAGTTG 58.674 44.000 21.92 15.57 44.01 3.16
3989 4358 4.411927 ACACCTACTCTCTCATGAGTTGT 58.588 43.478 21.92 18.98 44.01 3.32
3990 4359 4.835615 ACACCTACTCTCTCATGAGTTGTT 59.164 41.667 21.92 8.45 44.01 2.83
3991 4360 5.305644 ACACCTACTCTCTCATGAGTTGTTT 59.694 40.000 21.92 7.14 44.01 2.83
3992 4361 6.183361 ACACCTACTCTCTCATGAGTTGTTTT 60.183 38.462 21.92 6.16 44.01 2.43
3993 4362 6.367422 CACCTACTCTCTCATGAGTTGTTTTC 59.633 42.308 21.92 0.00 44.01 2.29
3994 4363 6.042093 ACCTACTCTCTCATGAGTTGTTTTCA 59.958 38.462 21.92 0.00 44.01 2.69
3995 4364 6.367422 CCTACTCTCTCATGAGTTGTTTTCAC 59.633 42.308 21.92 0.00 44.01 3.18
3996 4365 5.059833 ACTCTCTCATGAGTTGTTTTCACC 58.940 41.667 21.92 0.00 44.01 4.02
3997 4366 4.389374 TCTCTCATGAGTTGTTTTCACCC 58.611 43.478 21.92 0.00 40.98 4.61
3998 4367 4.103153 TCTCTCATGAGTTGTTTTCACCCT 59.897 41.667 21.92 0.00 40.98 4.34
3999 4368 4.389374 TCTCATGAGTTGTTTTCACCCTC 58.611 43.478 21.92 0.00 0.00 4.30
4000 4369 3.138304 TCATGAGTTGTTTTCACCCTCG 58.862 45.455 0.00 0.00 33.38 4.63
4001 4370 2.992124 TGAGTTGTTTTCACCCTCGA 57.008 45.000 0.00 0.00 33.38 4.04
4002 4371 3.269538 TGAGTTGTTTTCACCCTCGAA 57.730 42.857 0.00 0.00 33.38 3.71
4003 4372 3.202906 TGAGTTGTTTTCACCCTCGAAG 58.797 45.455 0.00 0.00 33.38 3.79
4004 4373 3.118555 TGAGTTGTTTTCACCCTCGAAGA 60.119 43.478 0.00 0.00 33.38 2.87
4005 4374 3.875134 GAGTTGTTTTCACCCTCGAAGAA 59.125 43.478 0.00 0.00 34.09 2.52
4006 4375 3.877508 AGTTGTTTTCACCCTCGAAGAAG 59.122 43.478 0.00 0.00 34.09 2.85
4007 4376 3.830744 TGTTTTCACCCTCGAAGAAGA 57.169 42.857 0.00 0.00 34.09 2.87
4008 4377 4.351874 TGTTTTCACCCTCGAAGAAGAT 57.648 40.909 0.00 0.00 34.09 2.40
4009 4378 4.065088 TGTTTTCACCCTCGAAGAAGATG 58.935 43.478 0.00 0.00 34.09 2.90
4010 4379 4.065789 GTTTTCACCCTCGAAGAAGATGT 58.934 43.478 0.00 0.00 34.09 3.06
4011 4380 3.319137 TTCACCCTCGAAGAAGATGTG 57.681 47.619 0.00 0.00 34.09 3.21
4012 4381 1.066858 TCACCCTCGAAGAAGATGTGC 60.067 52.381 0.00 0.00 34.09 4.57
4013 4382 0.250513 ACCCTCGAAGAAGATGTGCC 59.749 55.000 0.00 0.00 34.09 5.01
4014 4383 0.807667 CCCTCGAAGAAGATGTGCCG 60.808 60.000 0.00 0.00 34.09 5.69
4015 4384 0.807667 CCTCGAAGAAGATGTGCCGG 60.808 60.000 0.00 0.00 34.09 6.13
4016 4385 0.173481 CTCGAAGAAGATGTGCCGGA 59.827 55.000 5.05 0.00 34.09 5.14
4017 4386 0.606096 TCGAAGAAGATGTGCCGGAA 59.394 50.000 5.05 0.00 0.00 4.30
4018 4387 0.721718 CGAAGAAGATGTGCCGGAAC 59.278 55.000 5.27 5.27 0.00 3.62
4019 4388 1.673033 CGAAGAAGATGTGCCGGAACT 60.673 52.381 15.35 0.00 0.00 3.01
4020 4389 2.427506 GAAGAAGATGTGCCGGAACTT 58.572 47.619 15.35 7.56 0.00 2.66
4021 4390 1.813513 AGAAGATGTGCCGGAACTTG 58.186 50.000 15.35 0.00 0.00 3.16
4022 4391 1.347707 AGAAGATGTGCCGGAACTTGA 59.652 47.619 15.35 0.00 0.00 3.02
4023 4392 1.464997 GAAGATGTGCCGGAACTTGAC 59.535 52.381 15.35 2.52 0.00 3.18
4024 4393 0.687354 AGATGTGCCGGAACTTGACT 59.313 50.000 15.35 4.91 0.00 3.41
4025 4394 1.072331 AGATGTGCCGGAACTTGACTT 59.928 47.619 15.35 0.00 0.00 3.01
4026 4395 1.464997 GATGTGCCGGAACTTGACTTC 59.535 52.381 15.35 0.00 0.00 3.01
4027 4396 0.179234 TGTGCCGGAACTTGACTTCA 59.821 50.000 15.35 0.00 0.00 3.02
4028 4397 1.305201 GTGCCGGAACTTGACTTCAA 58.695 50.000 5.05 0.00 0.00 2.69
4029 4398 1.880027 GTGCCGGAACTTGACTTCAAT 59.120 47.619 5.05 0.00 35.02 2.57
4030 4399 2.095718 GTGCCGGAACTTGACTTCAATC 60.096 50.000 5.05 0.00 35.02 2.67
4031 4400 2.224523 TGCCGGAACTTGACTTCAATCT 60.225 45.455 5.05 0.00 35.02 2.40
4032 4401 2.416893 GCCGGAACTTGACTTCAATCTC 59.583 50.000 5.05 0.00 35.02 2.75
4033 4402 3.003480 CCGGAACTTGACTTCAATCTCC 58.997 50.000 0.00 8.49 35.02 3.71
4034 4403 3.307059 CCGGAACTTGACTTCAATCTCCT 60.307 47.826 0.00 0.00 35.75 3.69
4035 4404 4.319177 CGGAACTTGACTTCAATCTCCTT 58.681 43.478 13.60 0.00 35.75 3.36
4036 4405 5.479306 CGGAACTTGACTTCAATCTCCTTA 58.521 41.667 13.60 0.00 35.75 2.69
4037 4406 5.932303 CGGAACTTGACTTCAATCTCCTTAA 59.068 40.000 13.60 0.00 35.75 1.85
4038 4407 6.426937 CGGAACTTGACTTCAATCTCCTTAAA 59.573 38.462 13.60 0.00 35.75 1.52
4039 4408 7.041372 CGGAACTTGACTTCAATCTCCTTAAAA 60.041 37.037 13.60 0.00 35.75 1.52
4040 4409 8.797438 GGAACTTGACTTCAATCTCCTTAAAAT 58.203 33.333 10.32 0.00 35.37 1.82
4043 4412 9.579932 ACTTGACTTCAATCTCCTTAAAATTCT 57.420 29.630 0.00 0.00 35.02 2.40
4044 4413 9.837525 CTTGACTTCAATCTCCTTAAAATTCTG 57.162 33.333 0.00 0.00 35.02 3.02
4045 4414 8.340618 TGACTTCAATCTCCTTAAAATTCTGG 57.659 34.615 0.00 0.00 0.00 3.86
4046 4415 7.944554 TGACTTCAATCTCCTTAAAATTCTGGT 59.055 33.333 0.00 0.00 0.00 4.00
4047 4416 8.115490 ACTTCAATCTCCTTAAAATTCTGGTG 57.885 34.615 0.00 0.00 0.00 4.17
4048 4417 7.177392 ACTTCAATCTCCTTAAAATTCTGGTGG 59.823 37.037 0.00 0.00 0.00 4.61
4049 4418 5.951747 TCAATCTCCTTAAAATTCTGGTGGG 59.048 40.000 0.00 0.00 0.00 4.61
4050 4419 3.697166 TCTCCTTAAAATTCTGGTGGGC 58.303 45.455 0.00 0.00 0.00 5.36
4051 4420 3.333680 TCTCCTTAAAATTCTGGTGGGCT 59.666 43.478 0.00 0.00 0.00 5.19
4052 4421 3.430453 TCCTTAAAATTCTGGTGGGCTG 58.570 45.455 0.00 0.00 0.00 4.85
4053 4422 2.094026 CCTTAAAATTCTGGTGGGCTGC 60.094 50.000 0.00 0.00 0.00 5.25
4054 4423 2.300956 TAAAATTCTGGTGGGCTGCA 57.699 45.000 0.50 0.00 0.00 4.41
4055 4424 1.422531 AAAATTCTGGTGGGCTGCAA 58.577 45.000 0.50 0.00 0.00 4.08
4056 4425 1.648116 AAATTCTGGTGGGCTGCAAT 58.352 45.000 0.50 0.00 0.00 3.56
4057 4426 0.899720 AATTCTGGTGGGCTGCAATG 59.100 50.000 0.50 0.00 0.00 2.82
4058 4427 0.040058 ATTCTGGTGGGCTGCAATGA 59.960 50.000 0.50 0.00 0.00 2.57
4059 4428 0.178967 TTCTGGTGGGCTGCAATGAA 60.179 50.000 0.50 0.00 0.00 2.57
4060 4429 0.895100 TCTGGTGGGCTGCAATGAAC 60.895 55.000 0.50 0.00 0.00 3.18
4061 4430 2.203972 CTGGTGGGCTGCAATGAACG 62.204 60.000 0.50 0.00 0.00 3.95
4062 4431 2.568090 GTGGGCTGCAATGAACGG 59.432 61.111 0.50 0.00 0.00 4.44
4063 4432 2.115052 TGGGCTGCAATGAACGGT 59.885 55.556 0.50 0.00 0.00 4.83
4064 4433 2.267351 TGGGCTGCAATGAACGGTG 61.267 57.895 0.50 0.00 0.00 4.94
4065 4434 1.971167 GGGCTGCAATGAACGGTGA 60.971 57.895 0.50 0.00 0.00 4.02
4066 4435 1.315257 GGGCTGCAATGAACGGTGAT 61.315 55.000 0.50 0.00 0.00 3.06
4067 4436 1.378531 GGCTGCAATGAACGGTGATA 58.621 50.000 0.50 0.00 0.00 2.15
4068 4437 1.331756 GGCTGCAATGAACGGTGATAG 59.668 52.381 0.50 0.00 0.00 2.08
4069 4438 1.331756 GCTGCAATGAACGGTGATAGG 59.668 52.381 0.00 0.00 0.00 2.57
4070 4439 2.905075 CTGCAATGAACGGTGATAGGA 58.095 47.619 0.00 0.00 0.00 2.94
4071 4440 3.270027 CTGCAATGAACGGTGATAGGAA 58.730 45.455 0.00 0.00 0.00 3.36
4072 4441 3.680490 TGCAATGAACGGTGATAGGAAA 58.320 40.909 0.00 0.00 0.00 3.13
4073 4442 3.689161 TGCAATGAACGGTGATAGGAAAG 59.311 43.478 0.00 0.00 0.00 2.62
4074 4443 3.689649 GCAATGAACGGTGATAGGAAAGT 59.310 43.478 0.00 0.00 0.00 2.66
4075 4444 4.437390 GCAATGAACGGTGATAGGAAAGTG 60.437 45.833 0.00 0.00 0.00 3.16
4076 4445 2.695359 TGAACGGTGATAGGAAAGTGC 58.305 47.619 0.00 0.00 0.00 4.40
4077 4446 2.037902 TGAACGGTGATAGGAAAGTGCA 59.962 45.455 0.00 0.00 0.00 4.57
4078 4447 3.270877 GAACGGTGATAGGAAAGTGCAT 58.729 45.455 0.00 0.00 0.00 3.96
4079 4448 3.350219 ACGGTGATAGGAAAGTGCATT 57.650 42.857 0.00 0.00 0.00 3.56
4080 4449 3.009723 ACGGTGATAGGAAAGTGCATTG 58.990 45.455 0.00 0.00 0.00 2.82
4081 4450 2.355756 CGGTGATAGGAAAGTGCATTGG 59.644 50.000 0.00 0.00 0.00 3.16
4082 4451 3.620488 GGTGATAGGAAAGTGCATTGGA 58.380 45.455 0.00 0.00 0.00 3.53
4083 4452 4.210331 GGTGATAGGAAAGTGCATTGGAT 58.790 43.478 0.00 0.00 0.00 3.41
4084 4453 4.646492 GGTGATAGGAAAGTGCATTGGATT 59.354 41.667 0.00 0.00 0.00 3.01
4085 4454 5.450965 GGTGATAGGAAAGTGCATTGGATTG 60.451 44.000 0.00 0.00 0.00 2.67
4086 4455 4.098349 TGATAGGAAAGTGCATTGGATTGC 59.902 41.667 0.00 0.00 43.07 3.56
4087 4456 1.551883 AGGAAAGTGCATTGGATTGCC 59.448 47.619 0.00 0.00 42.06 4.52
4088 4457 1.551883 GGAAAGTGCATTGGATTGCCT 59.448 47.619 0.00 0.00 42.06 4.75
4089 4458 2.613691 GAAAGTGCATTGGATTGCCTG 58.386 47.619 0.00 0.00 42.06 4.85
4090 4459 0.899720 AAGTGCATTGGATTGCCTGG 59.100 50.000 0.00 0.00 42.06 4.45
4091 4460 0.974010 AGTGCATTGGATTGCCTGGG 60.974 55.000 0.00 0.00 42.06 4.45
4092 4461 0.971959 GTGCATTGGATTGCCTGGGA 60.972 55.000 0.00 0.00 42.06 4.37
4093 4462 0.971959 TGCATTGGATTGCCTGGGAC 60.972 55.000 0.00 0.00 42.06 4.46
4094 4463 0.971959 GCATTGGATTGCCTGGGACA 60.972 55.000 0.00 0.00 36.60 4.02
4095 4464 1.559368 CATTGGATTGCCTGGGACAA 58.441 50.000 0.00 0.00 38.70 3.18
4096 4465 1.901159 CATTGGATTGCCTGGGACAAA 59.099 47.619 0.00 0.00 38.70 2.83
4097 4466 2.094100 TTGGATTGCCTGGGACAAAA 57.906 45.000 0.00 0.00 38.70 2.44
4098 4467 2.323999 TGGATTGCCTGGGACAAAAT 57.676 45.000 0.00 0.00 38.70 1.82
4099 4468 1.901159 TGGATTGCCTGGGACAAAATG 59.099 47.619 0.00 0.00 38.70 2.32
4100 4469 1.901833 GGATTGCCTGGGACAAAATGT 59.098 47.619 0.00 0.00 38.70 2.71
4101 4470 2.354003 GGATTGCCTGGGACAAAATGTG 60.354 50.000 0.00 0.00 38.70 3.21
4102 4471 0.392336 TTGCCTGGGACAAAATGTGC 59.608 50.000 0.00 0.00 38.70 4.57
4110 4479 3.831715 GGACAAAATGTGCCAGTCTAC 57.168 47.619 0.00 0.00 32.15 2.59
4111 4480 3.412386 GGACAAAATGTGCCAGTCTACT 58.588 45.455 0.00 0.00 32.15 2.57
4112 4481 3.437049 GGACAAAATGTGCCAGTCTACTC 59.563 47.826 0.00 0.00 32.15 2.59
4113 4482 4.319177 GACAAAATGTGCCAGTCTACTCT 58.681 43.478 0.00 0.00 0.00 3.24
4114 4483 5.479306 GACAAAATGTGCCAGTCTACTCTA 58.521 41.667 0.00 0.00 0.00 2.43
4115 4484 5.865085 ACAAAATGTGCCAGTCTACTCTAA 58.135 37.500 0.00 0.00 0.00 2.10
4116 4485 6.296026 ACAAAATGTGCCAGTCTACTCTAAA 58.704 36.000 0.00 0.00 0.00 1.85
4117 4486 6.204882 ACAAAATGTGCCAGTCTACTCTAAAC 59.795 38.462 0.00 0.00 0.00 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.006102 AACACAAGACCCTCGCGAG 60.006 57.895 29.06 29.06 0.00 5.03
9 10 1.300620 CAACACAAGACCCTCGCGA 60.301 57.895 9.26 9.26 0.00 5.87
10 11 1.157870 AACAACACAAGACCCTCGCG 61.158 55.000 0.00 0.00 0.00 5.87
11 12 0.307760 CAACAACACAAGACCCTCGC 59.692 55.000 0.00 0.00 0.00 5.03
12 13 1.948104 TCAACAACACAAGACCCTCG 58.052 50.000 0.00 0.00 0.00 4.63
13 14 2.030805 GCATCAACAACACAAGACCCTC 60.031 50.000 0.00 0.00 0.00 4.30
14 15 1.956477 GCATCAACAACACAAGACCCT 59.044 47.619 0.00 0.00 0.00 4.34
15 16 1.956477 AGCATCAACAACACAAGACCC 59.044 47.619 0.00 0.00 0.00 4.46
16 17 2.618241 TCAGCATCAACAACACAAGACC 59.382 45.455 0.00 0.00 0.00 3.85
17 18 3.561310 TCTCAGCATCAACAACACAAGAC 59.439 43.478 0.00 0.00 0.00 3.01
18 19 3.561310 GTCTCAGCATCAACAACACAAGA 59.439 43.478 0.00 0.00 0.00 3.02
19 20 3.562973 AGTCTCAGCATCAACAACACAAG 59.437 43.478 0.00 0.00 0.00 3.16
20 21 3.313249 CAGTCTCAGCATCAACAACACAA 59.687 43.478 0.00 0.00 0.00 3.33
21 22 2.874086 CAGTCTCAGCATCAACAACACA 59.126 45.455 0.00 0.00 0.00 3.72
22 23 2.225019 CCAGTCTCAGCATCAACAACAC 59.775 50.000 0.00 0.00 0.00 3.32
23 24 2.497138 CCAGTCTCAGCATCAACAACA 58.503 47.619 0.00 0.00 0.00 3.33
24 25 1.808945 CCCAGTCTCAGCATCAACAAC 59.191 52.381 0.00 0.00 0.00 3.32
25 26 1.883638 GCCCAGTCTCAGCATCAACAA 60.884 52.381 0.00 0.00 0.00 2.83
26 27 0.321919 GCCCAGTCTCAGCATCAACA 60.322 55.000 0.00 0.00 0.00 3.33
27 28 1.028868 GGCCCAGTCTCAGCATCAAC 61.029 60.000 0.00 0.00 0.00 3.18
28 29 1.300963 GGCCCAGTCTCAGCATCAA 59.699 57.895 0.00 0.00 0.00 2.57
29 30 2.993008 GGCCCAGTCTCAGCATCA 59.007 61.111 0.00 0.00 0.00 3.07
30 31 1.676678 TACGGCCCAGTCTCAGCATC 61.677 60.000 0.00 0.00 0.00 3.91
31 32 1.685765 TACGGCCCAGTCTCAGCAT 60.686 57.895 0.00 0.00 0.00 3.79
32 33 2.283604 TACGGCCCAGTCTCAGCA 60.284 61.111 0.00 0.00 0.00 4.41
33 34 2.184579 GTACGGCCCAGTCTCAGC 59.815 66.667 0.00 0.00 0.00 4.26
34 35 1.541310 TTGGTACGGCCCAGTCTCAG 61.541 60.000 0.00 0.00 35.49 3.35
35 36 1.534476 TTGGTACGGCCCAGTCTCA 60.534 57.895 0.00 0.00 35.49 3.27
36 37 1.218316 CTTGGTACGGCCCAGTCTC 59.782 63.158 0.00 0.00 35.49 3.36
37 38 2.955881 GCTTGGTACGGCCCAGTCT 61.956 63.158 0.00 0.00 35.49 3.24
38 39 2.436115 GCTTGGTACGGCCCAGTC 60.436 66.667 0.00 0.00 35.49 3.51
39 40 4.029809 GGCTTGGTACGGCCCAGT 62.030 66.667 10.74 0.00 42.37 4.00
40 41 3.344137 ATGGCTTGGTACGGCCCAG 62.344 63.158 16.72 0.00 46.30 4.45
41 42 3.334891 ATGGCTTGGTACGGCCCA 61.335 61.111 16.72 7.82 46.30 5.36
42 43 2.516225 GATGGCTTGGTACGGCCC 60.516 66.667 16.72 2.94 46.30 5.80
43 44 2.660258 ATCGATGGCTTGGTACGGCC 62.660 60.000 13.82 13.82 46.85 6.13
44 45 1.227556 ATCGATGGCTTGGTACGGC 60.228 57.895 0.00 0.00 0.00 5.68
45 46 0.880278 CCATCGATGGCTTGGTACGG 60.880 60.000 30.53 4.03 41.75 4.02
46 47 2.605094 CCATCGATGGCTTGGTACG 58.395 57.895 30.53 4.83 41.75 3.67
56 57 1.884464 CCACGTGGCTCCATCGATG 60.884 63.158 24.02 18.76 0.00 3.84
57 58 2.359169 ACCACGTGGCTCCATCGAT 61.359 57.895 34.26 8.75 39.32 3.59
58 59 2.994995 ACCACGTGGCTCCATCGA 60.995 61.111 34.26 0.00 39.32 3.59
59 60 2.815211 CACCACGTGGCTCCATCG 60.815 66.667 34.26 8.61 39.32 3.84
84 85 3.492353 TATCCAGCCCTGCCTGCC 61.492 66.667 0.00 0.00 0.00 4.85
85 86 2.203266 GTATCCAGCCCTGCCTGC 60.203 66.667 0.00 0.00 0.00 4.85
86 87 2.512896 GGTATCCAGCCCTGCCTG 59.487 66.667 0.00 0.00 0.00 4.85
87 88 2.774351 GGGTATCCAGCCCTGCCT 60.774 66.667 0.00 0.00 42.81 4.75
93 94 0.919710 GGATATGGGGGTATCCAGCC 59.080 60.000 7.82 0.00 46.20 4.85
97 98 2.197465 GTCCTGGATATGGGGGTATCC 58.803 57.143 0.00 6.09 46.82 2.59
98 99 1.831736 CGTCCTGGATATGGGGGTATC 59.168 57.143 0.00 0.00 0.00 2.24
99 100 1.952621 CGTCCTGGATATGGGGGTAT 58.047 55.000 0.00 0.00 0.00 2.73
100 101 0.834687 GCGTCCTGGATATGGGGGTA 60.835 60.000 0.00 0.00 0.00 3.69
101 102 2.147387 GCGTCCTGGATATGGGGGT 61.147 63.158 0.00 0.00 0.00 4.95
102 103 1.843376 AGCGTCCTGGATATGGGGG 60.843 63.158 0.00 0.00 0.00 5.40
103 104 1.121407 TCAGCGTCCTGGATATGGGG 61.121 60.000 0.00 0.00 39.61 4.96
104 105 0.034059 GTCAGCGTCCTGGATATGGG 59.966 60.000 0.00 0.00 39.61 4.00
105 106 0.752658 TGTCAGCGTCCTGGATATGG 59.247 55.000 0.00 0.00 39.61 2.74
106 107 2.827800 ATGTCAGCGTCCTGGATATG 57.172 50.000 0.00 0.00 39.61 1.78
107 108 2.968574 AGAATGTCAGCGTCCTGGATAT 59.031 45.455 0.00 0.00 39.61 1.63
108 109 2.388735 AGAATGTCAGCGTCCTGGATA 58.611 47.619 0.00 0.00 39.61 2.59
109 110 1.198713 AGAATGTCAGCGTCCTGGAT 58.801 50.000 0.00 0.00 39.61 3.41
110 111 0.976641 AAGAATGTCAGCGTCCTGGA 59.023 50.000 0.00 0.00 39.61 3.86
111 112 1.066573 AGAAGAATGTCAGCGTCCTGG 60.067 52.381 0.00 0.00 39.61 4.45
112 113 2.094286 AGAGAAGAATGTCAGCGTCCTG 60.094 50.000 0.00 0.00 40.54 3.86
113 114 2.094286 CAGAGAAGAATGTCAGCGTCCT 60.094 50.000 0.00 0.00 0.00 3.85
114 115 2.266554 CAGAGAAGAATGTCAGCGTCC 58.733 52.381 0.00 0.00 0.00 4.79
115 116 2.266554 CCAGAGAAGAATGTCAGCGTC 58.733 52.381 0.00 0.00 0.00 5.19
116 117 1.674221 GCCAGAGAAGAATGTCAGCGT 60.674 52.381 0.00 0.00 0.00 5.07
117 118 1.005340 GCCAGAGAAGAATGTCAGCG 58.995 55.000 0.00 0.00 0.00 5.18
118 119 1.005340 CGCCAGAGAAGAATGTCAGC 58.995 55.000 0.00 0.00 0.00 4.26
119 120 2.662006 TCGCCAGAGAAGAATGTCAG 57.338 50.000 0.00 0.00 0.00 3.51
150 151 3.576861 TCAGATCCTTCACCGACCATAT 58.423 45.455 0.00 0.00 0.00 1.78
182 184 1.400242 GCCACAACATCTTCGCTTGAC 60.400 52.381 0.00 0.00 0.00 3.18
191 193 2.672996 GCCACCGCCACAACATCT 60.673 61.111 0.00 0.00 0.00 2.90
299 319 3.378742 CAGACCACGATCTGTAGTAGCTT 59.621 47.826 0.00 0.00 41.12 3.74
303 323 2.718563 TGCAGACCACGATCTGTAGTA 58.281 47.619 14.47 1.59 46.65 1.82
305 325 2.736978 GATGCAGACCACGATCTGTAG 58.263 52.381 14.47 0.00 46.65 2.74
313 333 0.458370 TGTCATCGATGCAGACCACG 60.458 55.000 20.81 0.00 0.00 4.94
490 518 0.609406 GGACTTCCAAACTGGCTCCC 60.609 60.000 0.00 0.00 37.47 4.30
491 519 0.955919 CGGACTTCCAAACTGGCTCC 60.956 60.000 0.00 0.00 37.47 4.70
498 526 2.922335 GCAGATTTGCGGACTTCCAAAC 60.922 50.000 0.00 0.00 41.13 2.93
570 598 1.212751 GCAGCCGCCGAAAGAAAAT 59.787 52.632 0.00 0.00 0.00 1.82
614 643 1.598130 GAGCTTGCCACCAACGTCT 60.598 57.895 0.00 0.00 0.00 4.18
625 654 3.505808 AGAACGTCTCTGAGCTTGC 57.494 52.632 0.00 0.00 31.12 4.01
633 662 4.750598 GGCTTAAAAGAACAGAACGTCTCT 59.249 41.667 0.00 0.00 33.23 3.10
634 663 4.750598 AGGCTTAAAAGAACAGAACGTCTC 59.249 41.667 0.00 0.00 0.00 3.36
635 664 4.704965 AGGCTTAAAAGAACAGAACGTCT 58.295 39.130 0.00 0.00 0.00 4.18
636 665 5.924825 TCTAGGCTTAAAAGAACAGAACGTC 59.075 40.000 0.00 0.00 0.00 4.34
637 666 5.850614 TCTAGGCTTAAAAGAACAGAACGT 58.149 37.500 0.00 0.00 0.00 3.99
638 667 6.157211 TCTCTAGGCTTAAAAGAACAGAACG 58.843 40.000 0.00 0.00 0.00 3.95
639 668 7.604545 ACATCTCTAGGCTTAAAAGAACAGAAC 59.395 37.037 0.00 0.00 0.00 3.01
640 669 7.680730 ACATCTCTAGGCTTAAAAGAACAGAA 58.319 34.615 0.00 0.00 0.00 3.02
641 670 7.246171 ACATCTCTAGGCTTAAAAGAACAGA 57.754 36.000 0.00 0.00 0.00 3.41
642 671 7.821846 AGAACATCTCTAGGCTTAAAAGAACAG 59.178 37.037 0.00 0.00 30.22 3.16
643 672 7.604164 CAGAACATCTCTAGGCTTAAAAGAACA 59.396 37.037 0.00 0.00 31.12 3.18
644 673 7.413548 GCAGAACATCTCTAGGCTTAAAAGAAC 60.414 40.741 0.00 0.00 31.12 3.01
645 674 6.595716 GCAGAACATCTCTAGGCTTAAAAGAA 59.404 38.462 0.00 0.00 31.12 2.52
646 675 6.070538 AGCAGAACATCTCTAGGCTTAAAAGA 60.071 38.462 0.00 0.00 31.04 2.52
647 676 6.036953 CAGCAGAACATCTCTAGGCTTAAAAG 59.963 42.308 0.00 0.00 32.46 2.27
648 677 5.877012 CAGCAGAACATCTCTAGGCTTAAAA 59.123 40.000 0.00 0.00 32.46 1.52
649 678 5.046304 ACAGCAGAACATCTCTAGGCTTAAA 60.046 40.000 0.00 0.00 32.46 1.52
650 679 4.467795 ACAGCAGAACATCTCTAGGCTTAA 59.532 41.667 0.00 0.00 32.46 1.85
651 680 4.026744 ACAGCAGAACATCTCTAGGCTTA 58.973 43.478 0.00 0.00 32.46 3.09
652 681 2.836981 ACAGCAGAACATCTCTAGGCTT 59.163 45.455 0.00 0.00 32.46 4.35
653 682 2.430332 GACAGCAGAACATCTCTAGGCT 59.570 50.000 0.00 0.00 34.53 4.58
654 683 2.430332 AGACAGCAGAACATCTCTAGGC 59.570 50.000 0.00 0.00 31.12 3.93
655 684 4.734398 AAGACAGCAGAACATCTCTAGG 57.266 45.455 0.00 0.00 31.12 3.02
656 685 6.162079 TGAAAAGACAGCAGAACATCTCTAG 58.838 40.000 0.00 0.00 31.12 2.43
657 686 6.101650 TGAAAAGACAGCAGAACATCTCTA 57.898 37.500 0.00 0.00 31.12 2.43
763 794 9.268282 TCCCTACTCTGTAAAGAAATAAGTGAT 57.732 33.333 0.00 0.00 0.00 3.06
764 795 8.660295 TCCCTACTCTGTAAAGAAATAAGTGA 57.340 34.615 0.00 0.00 0.00 3.41
765 796 8.532819 ACTCCCTACTCTGTAAAGAAATAAGTG 58.467 37.037 0.00 0.00 0.00 3.16
766 797 8.667592 ACTCCCTACTCTGTAAAGAAATAAGT 57.332 34.615 0.00 0.00 0.00 2.24
768 799 9.986157 TCTACTCCCTACTCTGTAAAGAAATAA 57.014 33.333 0.00 0.00 0.00 1.40
874 909 3.370953 GGGATGTTTGCTCTCATACCTGT 60.371 47.826 8.76 0.00 40.74 4.00
885 920 1.575447 GGGAGGGAGGGATGTTTGCT 61.575 60.000 0.00 0.00 0.00 3.91
1052 1304 1.745864 GAGACGTCTGAGCCTCGGA 60.746 63.158 25.58 0.00 0.00 4.55
1058 1310 0.179184 GAACGAGGAGACGTCTGAGC 60.179 60.000 25.58 8.66 45.83 4.26
1062 1314 3.999701 GGGAACGAGGAGACGTCT 58.000 61.111 20.18 20.18 45.83 4.18
1641 1893 6.018343 CGAAAGCTGCAAAGGGAAATTAAAAA 60.018 34.615 1.02 0.00 0.00 1.94
1644 1896 4.038642 ACGAAAGCTGCAAAGGGAAATTAA 59.961 37.500 1.02 0.00 0.00 1.40
1645 1897 3.572255 ACGAAAGCTGCAAAGGGAAATTA 59.428 39.130 1.02 0.00 0.00 1.40
1646 1898 2.365293 ACGAAAGCTGCAAAGGGAAATT 59.635 40.909 1.02 0.00 0.00 1.82
1647 1899 1.963515 ACGAAAGCTGCAAAGGGAAAT 59.036 42.857 1.02 0.00 0.00 2.17
1710 1963 6.660094 CCCTTGAAGAAGTACTGTACTACTCT 59.340 42.308 19.97 16.50 38.26 3.24
1724 1977 5.474532 TCAACATGATGAACCCTTGAAGAAG 59.525 40.000 2.74 0.00 0.00 2.85
1751 2004 9.147732 AGGATAGTGAAAAGAAAACCAGAAATT 57.852 29.630 0.00 0.00 0.00 1.82
1771 2029 0.755686 AGGCCGAAGCTTCAGGATAG 59.244 55.000 29.49 13.60 39.73 2.08
1787 2045 9.238368 ACTAGTAGTAATCTATCATGAAGAGGC 57.762 37.037 0.00 0.09 0.00 4.70
1839 2097 1.281899 CTAAGCTACTGCCGCACTTC 58.718 55.000 0.00 0.00 40.80 3.01
1924 2183 3.652869 GGGGATCTCCTGGATGTCAAATA 59.347 47.826 3.62 0.00 34.33 1.40
2089 2348 6.218108 AGTACTACTAGTAACATTGCCCAC 57.782 41.667 3.76 0.00 31.62 4.61
2090 2349 6.862469 AAGTACTACTAGTAACATTGCCCA 57.138 37.500 3.76 0.00 31.62 5.36
2091 2350 6.922407 GCTAAGTACTACTAGTAACATTGCCC 59.078 42.308 3.76 0.00 31.62 5.36
2092 2351 7.486647 TGCTAAGTACTACTAGTAACATTGCC 58.513 38.462 3.76 0.00 31.62 4.52
2108 2378 9.943163 GTACTAGTAACTGGTAATGCTAAGTAC 57.057 37.037 3.61 0.00 29.73 2.73
2125 2395 6.653020 TGGTCCTGTAATCGAGTACTAGTAA 58.347 40.000 22.11 2.54 0.00 2.24
2126 2396 6.239217 TGGTCCTGTAATCGAGTACTAGTA 57.761 41.667 22.11 0.00 0.00 1.82
2127 2397 5.108187 TGGTCCTGTAATCGAGTACTAGT 57.892 43.478 22.11 0.00 0.00 2.57
2222 2492 1.766494 TCATTGCTATTGCCTGTGGG 58.234 50.000 0.00 0.00 38.71 4.61
2298 2568 6.927294 ACAAGTTAAGGACAAACTCTCTTG 57.073 37.500 0.00 0.00 36.17 3.02
2349 2631 5.066375 TGTGTTCCTTCTTCATTGTTCAGTG 59.934 40.000 0.00 0.00 0.00 3.66
2358 2640 2.065799 AGGGGTGTGTTCCTTCTTCAT 58.934 47.619 0.00 0.00 0.00 2.57
2366 2648 4.800554 CAGACAGGGGTGTGTTCC 57.199 61.111 0.00 0.00 33.83 3.62
2376 2658 4.130118 ACAAGAGCAAAAGTACAGACAGG 58.870 43.478 0.00 0.00 0.00 4.00
2430 2713 5.991606 TCTCAGTACAGAACAATGTCAAAGG 59.008 40.000 0.00 0.00 34.56 3.11
2487 2771 0.523072 ACTTTGATCACGCACATGCC 59.477 50.000 0.00 0.00 37.91 4.40
2496 2780 1.225855 TGCACGACCACTTTGATCAC 58.774 50.000 0.00 0.00 0.00 3.06
2502 2786 2.268076 GCCCATGCACGACCACTTT 61.268 57.895 0.00 0.00 37.47 2.66
2539 2823 4.570874 GGATTGCCCGGCCCTCTC 62.571 72.222 7.03 0.00 0.00 3.20
2696 2980 4.527038 CCACAGGTTAAACTCCTCACTCTA 59.473 45.833 0.00 0.00 32.37 2.43
2697 2981 3.325135 CCACAGGTTAAACTCCTCACTCT 59.675 47.826 0.00 0.00 32.37 3.24
2701 2985 1.771854 TGCCACAGGTTAAACTCCTCA 59.228 47.619 0.00 0.00 32.37 3.86
2720 3004 5.114780 CCTTCACCTGATCACAAGTAGATG 58.885 45.833 0.00 0.00 0.00 2.90
3064 3354 2.686470 CAGGCAGAGGAGGGAGCA 60.686 66.667 0.00 0.00 0.00 4.26
3167 3457 5.288804 CAACCAACCAGTTCCTACAAAATG 58.711 41.667 0.00 0.00 0.00 2.32
3179 3469 1.133606 CCCTAACACCAACCAACCAGT 60.134 52.381 0.00 0.00 0.00 4.00
3202 3496 2.692557 TGCAAGCAAAAAGGAAGCTACA 59.307 40.909 0.00 0.00 37.70 2.74
3203 3497 3.052745 GTGCAAGCAAAAAGGAAGCTAC 58.947 45.455 0.00 0.00 37.70 3.58
3234 3529 3.489059 CGGTGCAATCCGCTAATTTGATT 60.489 43.478 2.49 0.00 43.96 2.57
3261 3556 3.173965 CACGGGGTGGGATAATAGAGAT 58.826 50.000 0.00 0.00 0.00 2.75
3268 3563 0.406361 AAAAGCACGGGGTGGGATAA 59.594 50.000 0.00 0.00 33.64 1.75
3329 3628 5.358298 AATAGTTTCGGCTTGAACAAGTC 57.642 39.130 14.62 11.85 40.45 3.01
3419 3718 6.762702 ACCAAAAACCGACTCTTCTTTTTA 57.237 33.333 0.00 0.00 0.00 1.52
3446 3798 3.378911 TCAAAAGAAAATCCGTTGCCC 57.621 42.857 0.00 0.00 0.00 5.36
3492 3850 1.194781 TCTTCACCTCACCTGCCCTC 61.195 60.000 0.00 0.00 0.00 4.30
3512 3870 1.378124 CTCGTCGTCCTCCCTCTTCC 61.378 65.000 0.00 0.00 0.00 3.46
3513 3871 1.378124 CCTCGTCGTCCTCCCTCTTC 61.378 65.000 0.00 0.00 0.00 2.87
3514 3872 1.378778 CCTCGTCGTCCTCCCTCTT 60.379 63.158 0.00 0.00 0.00 2.85
3515 3873 2.260088 CTCCTCGTCGTCCTCCCTCT 62.260 65.000 0.00 0.00 0.00 3.69
3522 3880 4.437587 TCCCCCTCCTCGTCGTCC 62.438 72.222 0.00 0.00 0.00 4.79
3525 3883 4.790962 TCGTCCCCCTCCTCGTCG 62.791 72.222 0.00 0.00 0.00 5.12
3546 3904 3.192954 CTGTCGCGCCAAAGCCAAA 62.193 57.895 0.00 0.00 34.57 3.28
3590 3948 1.225983 CTGACCCACACCCACACAA 59.774 57.895 0.00 0.00 0.00 3.33
3637 3995 2.135933 GACAGACACAAGAAAGGACGG 58.864 52.381 0.00 0.00 0.00 4.79
3732 4094 3.376918 GCTGGCTGGCTGGGAAAC 61.377 66.667 9.98 0.00 0.00 2.78
3750 4117 0.677731 TCATCTTTCTTGGGCCGCTG 60.678 55.000 0.00 0.00 0.00 5.18
3751 4118 0.257039 ATCATCTTTCTTGGGCCGCT 59.743 50.000 0.00 0.00 0.00 5.52
3752 4119 1.967319 TATCATCTTTCTTGGGCCGC 58.033 50.000 0.00 0.00 0.00 6.53
3754 4121 3.631250 TGGTTATCATCTTTCTTGGGCC 58.369 45.455 0.00 0.00 0.00 5.80
3755 4122 5.410924 GTTTGGTTATCATCTTTCTTGGGC 58.589 41.667 0.00 0.00 0.00 5.36
3756 4123 5.183140 ACGTTTGGTTATCATCTTTCTTGGG 59.817 40.000 0.00 0.00 0.00 4.12
3757 4124 6.254281 ACGTTTGGTTATCATCTTTCTTGG 57.746 37.500 0.00 0.00 0.00 3.61
3758 4125 8.574196 AAAACGTTTGGTTATCATCTTTCTTG 57.426 30.769 15.46 0.00 38.08 3.02
3783 4150 8.511604 AAATGACACTGAGAGAGAAAGAAAAA 57.488 30.769 0.00 0.00 0.00 1.94
3784 4151 8.400947 CAAAATGACACTGAGAGAGAAAGAAAA 58.599 33.333 0.00 0.00 0.00 2.29
3788 4155 5.469421 AGCAAAATGACACTGAGAGAGAAAG 59.531 40.000 0.00 0.00 0.00 2.62
3794 4163 3.144506 ACCAGCAAAATGACACTGAGAG 58.855 45.455 0.00 0.00 31.67 3.20
3827 4196 5.449451 GGCTTCGTGGTTAACTTGAGAAAAA 60.449 40.000 5.42 0.00 0.00 1.94
3828 4197 4.035909 GGCTTCGTGGTTAACTTGAGAAAA 59.964 41.667 5.42 0.00 0.00 2.29
3829 4198 3.562557 GGCTTCGTGGTTAACTTGAGAAA 59.437 43.478 5.42 0.00 0.00 2.52
3830 4199 3.135994 GGCTTCGTGGTTAACTTGAGAA 58.864 45.455 5.42 5.99 0.00 2.87
3831 4200 2.367567 AGGCTTCGTGGTTAACTTGAGA 59.632 45.455 5.42 0.00 0.00 3.27
3832 4201 2.767505 AGGCTTCGTGGTTAACTTGAG 58.232 47.619 5.42 0.00 0.00 3.02
3833 4202 2.922740 AGGCTTCGTGGTTAACTTGA 57.077 45.000 5.42 0.00 0.00 3.02
3834 4203 3.982576 AAAGGCTTCGTGGTTAACTTG 57.017 42.857 0.00 0.00 0.00 3.16
3835 4204 6.644248 AATAAAAGGCTTCGTGGTTAACTT 57.356 33.333 0.00 0.00 0.00 2.66
3836 4205 6.644248 AAATAAAAGGCTTCGTGGTTAACT 57.356 33.333 0.00 0.00 0.00 2.24
3837 4206 8.238631 TGATAAATAAAAGGCTTCGTGGTTAAC 58.761 33.333 0.00 0.00 0.00 2.01
3838 4207 8.338072 TGATAAATAAAAGGCTTCGTGGTTAA 57.662 30.769 0.00 0.00 0.00 2.01
3839 4208 7.925043 TGATAAATAAAAGGCTTCGTGGTTA 57.075 32.000 0.00 0.00 0.00 2.85
3840 4209 6.827586 TGATAAATAAAAGGCTTCGTGGTT 57.172 33.333 0.00 0.00 0.00 3.67
3841 4210 6.827586 TTGATAAATAAAAGGCTTCGTGGT 57.172 33.333 0.00 0.00 0.00 4.16
3842 4211 8.402472 TGTATTGATAAATAAAAGGCTTCGTGG 58.598 33.333 0.00 0.00 0.00 4.94
3843 4212 9.781834 TTGTATTGATAAATAAAAGGCTTCGTG 57.218 29.630 0.00 0.00 0.00 4.35
3857 4226 9.967451 TTGTAACCCTGAGATTGTATTGATAAA 57.033 29.630 0.00 0.00 0.00 1.40
3859 4228 9.778741 GATTGTAACCCTGAGATTGTATTGATA 57.221 33.333 0.00 0.00 0.00 2.15
3860 4229 7.721399 GGATTGTAACCCTGAGATTGTATTGAT 59.279 37.037 0.00 0.00 0.00 2.57
3861 4230 7.054124 GGATTGTAACCCTGAGATTGTATTGA 58.946 38.462 0.00 0.00 0.00 2.57
3862 4231 6.263168 GGGATTGTAACCCTGAGATTGTATTG 59.737 42.308 0.00 0.00 43.65 1.90
3863 4232 6.069088 TGGGATTGTAACCCTGAGATTGTATT 60.069 38.462 0.00 0.00 46.82 1.89
3864 4233 5.431731 TGGGATTGTAACCCTGAGATTGTAT 59.568 40.000 0.00 0.00 46.82 2.29
3865 4234 4.785914 TGGGATTGTAACCCTGAGATTGTA 59.214 41.667 0.00 0.00 46.82 2.41
3866 4235 3.591527 TGGGATTGTAACCCTGAGATTGT 59.408 43.478 0.00 0.00 46.82 2.71
3867 4236 4.202441 CTGGGATTGTAACCCTGAGATTG 58.798 47.826 0.00 0.00 46.82 2.67
3868 4237 3.203040 CCTGGGATTGTAACCCTGAGATT 59.797 47.826 0.00 0.00 46.82 2.40
3869 4238 2.780010 CCTGGGATTGTAACCCTGAGAT 59.220 50.000 0.00 0.00 46.82 2.75
3870 4239 2.196595 CCTGGGATTGTAACCCTGAGA 58.803 52.381 0.00 0.00 46.82 3.27
3871 4240 2.196595 TCCTGGGATTGTAACCCTGAG 58.803 52.381 0.00 0.00 46.82 3.35
3872 4241 2.352561 TCCTGGGATTGTAACCCTGA 57.647 50.000 0.00 0.00 46.82 3.86
3873 4242 3.356290 CTTTCCTGGGATTGTAACCCTG 58.644 50.000 0.00 0.00 46.82 4.45
3874 4243 2.311841 CCTTTCCTGGGATTGTAACCCT 59.688 50.000 0.00 0.00 46.82 4.34
3875 4244 2.042569 ACCTTTCCTGGGATTGTAACCC 59.957 50.000 0.00 0.00 46.87 4.11
3876 4245 3.451402 ACCTTTCCTGGGATTGTAACC 57.549 47.619 0.00 0.00 0.00 2.85
3877 4246 4.393990 CGTTACCTTTCCTGGGATTGTAAC 59.606 45.833 13.47 13.47 33.89 2.50
3878 4247 4.566070 CCGTTACCTTTCCTGGGATTGTAA 60.566 45.833 0.00 0.00 0.00 2.41
3879 4248 3.054948 CCGTTACCTTTCCTGGGATTGTA 60.055 47.826 0.00 0.00 0.00 2.41
3880 4249 2.290705 CCGTTACCTTTCCTGGGATTGT 60.291 50.000 0.00 0.00 0.00 2.71
3881 4250 2.365582 CCGTTACCTTTCCTGGGATTG 58.634 52.381 0.00 0.00 0.00 2.67
3882 4251 1.283905 CCCGTTACCTTTCCTGGGATT 59.716 52.381 0.00 0.00 39.03 3.01
3883 4252 0.916809 CCCGTTACCTTTCCTGGGAT 59.083 55.000 0.00 0.00 39.03 3.85
3884 4253 0.474273 ACCCGTTACCTTTCCTGGGA 60.474 55.000 1.41 0.00 39.03 4.37
3885 4254 0.402887 AACCCGTTACCTTTCCTGGG 59.597 55.000 0.00 0.00 42.50 4.45
3886 4255 1.530323 CAACCCGTTACCTTTCCTGG 58.470 55.000 0.00 0.00 0.00 4.45
3887 4256 1.072648 TCCAACCCGTTACCTTTCCTG 59.927 52.381 0.00 0.00 0.00 3.86
3888 4257 1.437397 TCCAACCCGTTACCTTTCCT 58.563 50.000 0.00 0.00 0.00 3.36
3889 4258 2.275134 TTCCAACCCGTTACCTTTCC 57.725 50.000 0.00 0.00 0.00 3.13
3890 4259 2.555325 CCTTTCCAACCCGTTACCTTTC 59.445 50.000 0.00 0.00 0.00 2.62
3891 4260 2.175284 TCCTTTCCAACCCGTTACCTTT 59.825 45.455 0.00 0.00 0.00 3.11
3892 4261 1.776063 TCCTTTCCAACCCGTTACCTT 59.224 47.619 0.00 0.00 0.00 3.50
3893 4262 1.072806 GTCCTTTCCAACCCGTTACCT 59.927 52.381 0.00 0.00 0.00 3.08
3894 4263 1.202794 TGTCCTTTCCAACCCGTTACC 60.203 52.381 0.00 0.00 0.00 2.85
3895 4264 2.259266 TGTCCTTTCCAACCCGTTAC 57.741 50.000 0.00 0.00 0.00 2.50
3896 4265 2.487625 CCTTGTCCTTTCCAACCCGTTA 60.488 50.000 0.00 0.00 0.00 3.18
3897 4266 1.687563 CTTGTCCTTTCCAACCCGTT 58.312 50.000 0.00 0.00 0.00 4.44
3898 4267 0.179001 CCTTGTCCTTTCCAACCCGT 60.179 55.000 0.00 0.00 0.00 5.28
3899 4268 0.179001 ACCTTGTCCTTTCCAACCCG 60.179 55.000 0.00 0.00 0.00 5.28
3900 4269 1.145119 AGACCTTGTCCTTTCCAACCC 59.855 52.381 0.00 0.00 32.18 4.11
3901 4270 2.658807 AGACCTTGTCCTTTCCAACC 57.341 50.000 0.00 0.00 32.18 3.77
3902 4271 4.906618 TGATAGACCTTGTCCTTTCCAAC 58.093 43.478 0.00 0.00 32.18 3.77
3903 4272 5.576563 TTGATAGACCTTGTCCTTTCCAA 57.423 39.130 0.00 0.00 32.18 3.53
3904 4273 5.309543 TCTTTGATAGACCTTGTCCTTTCCA 59.690 40.000 0.00 0.00 32.18 3.53
3905 4274 5.805728 TCTTTGATAGACCTTGTCCTTTCC 58.194 41.667 0.00 0.00 32.18 3.13
3906 4275 6.372937 CCTTCTTTGATAGACCTTGTCCTTTC 59.627 42.308 0.00 0.00 32.18 2.62
3907 4276 6.241645 CCTTCTTTGATAGACCTTGTCCTTT 58.758 40.000 0.00 0.00 32.18 3.11
3908 4277 5.804771 GCCTTCTTTGATAGACCTTGTCCTT 60.805 44.000 0.00 0.00 32.18 3.36
3909 4278 4.323868 GCCTTCTTTGATAGACCTTGTCCT 60.324 45.833 0.00 0.00 32.18 3.85
3910 4279 3.942115 GCCTTCTTTGATAGACCTTGTCC 59.058 47.826 0.00 0.00 32.18 4.02
3911 4280 3.942115 GGCCTTCTTTGATAGACCTTGTC 59.058 47.826 0.00 0.00 30.90 3.18
3912 4281 3.330701 TGGCCTTCTTTGATAGACCTTGT 59.669 43.478 3.32 0.00 30.90 3.16
3913 4282 3.944015 CTGGCCTTCTTTGATAGACCTTG 59.056 47.826 3.32 0.00 30.90 3.61
3914 4283 3.846588 TCTGGCCTTCTTTGATAGACCTT 59.153 43.478 3.32 0.00 30.90 3.50
3915 4284 3.454082 CTCTGGCCTTCTTTGATAGACCT 59.546 47.826 3.32 0.00 30.90 3.85
3916 4285 3.452627 TCTCTGGCCTTCTTTGATAGACC 59.547 47.826 3.32 0.00 30.90 3.85
3917 4286 4.744795 TCTCTGGCCTTCTTTGATAGAC 57.255 45.455 3.32 0.00 30.90 2.59
3918 4287 4.780021 ACTTCTCTGGCCTTCTTTGATAGA 59.220 41.667 3.32 0.00 0.00 1.98
3919 4288 4.874966 CACTTCTCTGGCCTTCTTTGATAG 59.125 45.833 3.32 0.00 0.00 2.08
3920 4289 4.836825 CACTTCTCTGGCCTTCTTTGATA 58.163 43.478 3.32 0.00 0.00 2.15
3921 4290 3.683802 CACTTCTCTGGCCTTCTTTGAT 58.316 45.455 3.32 0.00 0.00 2.57
3922 4291 2.811873 GCACTTCTCTGGCCTTCTTTGA 60.812 50.000 3.32 0.00 0.00 2.69
3923 4292 1.538950 GCACTTCTCTGGCCTTCTTTG 59.461 52.381 3.32 0.00 0.00 2.77
3924 4293 1.423161 AGCACTTCTCTGGCCTTCTTT 59.577 47.619 3.32 0.00 0.00 2.52
3925 4294 1.063183 AGCACTTCTCTGGCCTTCTT 58.937 50.000 3.32 0.00 0.00 2.52
3926 4295 1.063183 AAGCACTTCTCTGGCCTTCT 58.937 50.000 3.32 0.00 0.00 2.85
3927 4296 1.163554 CAAGCACTTCTCTGGCCTTC 58.836 55.000 3.32 0.00 0.00 3.46
3928 4297 0.475906 ACAAGCACTTCTCTGGCCTT 59.524 50.000 3.32 0.00 0.00 4.35
3929 4298 0.250640 CACAAGCACTTCTCTGGCCT 60.251 55.000 3.32 0.00 0.00 5.19
3930 4299 0.250467 TCACAAGCACTTCTCTGGCC 60.250 55.000 0.00 0.00 0.00 5.36
3931 4300 1.597742 TTCACAAGCACTTCTCTGGC 58.402 50.000 0.00 0.00 0.00 4.85
3932 4301 4.070716 AGAATTCACAAGCACTTCTCTGG 58.929 43.478 8.44 0.00 0.00 3.86
3933 4302 4.514441 ACAGAATTCACAAGCACTTCTCTG 59.486 41.667 8.44 0.00 35.12 3.35
3934 4303 4.712476 ACAGAATTCACAAGCACTTCTCT 58.288 39.130 8.44 0.00 0.00 3.10
3935 4304 5.238214 AGAACAGAATTCACAAGCACTTCTC 59.762 40.000 8.44 0.00 0.00 2.87
3936 4305 5.128919 AGAACAGAATTCACAAGCACTTCT 58.871 37.500 8.44 0.00 0.00 2.85
3937 4306 5.429957 AGAACAGAATTCACAAGCACTTC 57.570 39.130 8.44 0.00 0.00 3.01
3938 4307 5.357878 TGAAGAACAGAATTCACAAGCACTT 59.642 36.000 8.44 3.99 30.67 3.16
3939 4308 4.883585 TGAAGAACAGAATTCACAAGCACT 59.116 37.500 8.44 0.00 30.67 4.40
3940 4309 5.173774 TGAAGAACAGAATTCACAAGCAC 57.826 39.130 8.44 0.00 30.67 4.40
3974 4343 4.453819 GGGTGAAAACAACTCATGAGAGAG 59.546 45.833 29.27 18.54 44.98 3.20
3975 4344 4.103153 AGGGTGAAAACAACTCATGAGAGA 59.897 41.667 29.27 2.41 44.98 3.10
3977 4346 4.389374 GAGGGTGAAAACAACTCATGAGA 58.611 43.478 29.27 0.63 0.00 3.27
3978 4347 3.187227 CGAGGGTGAAAACAACTCATGAG 59.813 47.826 21.37 21.37 0.00 2.90
3979 4348 3.138304 CGAGGGTGAAAACAACTCATGA 58.862 45.455 0.00 0.00 0.00 3.07
3980 4349 3.138304 TCGAGGGTGAAAACAACTCATG 58.862 45.455 0.00 0.00 0.00 3.07
3981 4350 3.485463 TCGAGGGTGAAAACAACTCAT 57.515 42.857 0.00 0.00 0.00 2.90
3982 4351 2.992124 TCGAGGGTGAAAACAACTCA 57.008 45.000 0.00 0.00 0.00 3.41
3983 4352 3.463944 TCTTCGAGGGTGAAAACAACTC 58.536 45.455 0.00 0.00 0.00 3.01
3984 4353 3.553828 TCTTCGAGGGTGAAAACAACT 57.446 42.857 0.00 0.00 0.00 3.16
3985 4354 3.875134 TCTTCTTCGAGGGTGAAAACAAC 59.125 43.478 0.00 0.00 0.00 3.32
3986 4355 4.145365 TCTTCTTCGAGGGTGAAAACAA 57.855 40.909 0.00 0.00 0.00 2.83
3987 4356 3.830744 TCTTCTTCGAGGGTGAAAACA 57.169 42.857 0.00 0.00 0.00 2.83
3988 4357 4.065789 ACATCTTCTTCGAGGGTGAAAAC 58.934 43.478 0.00 0.00 0.00 2.43
3989 4358 4.065088 CACATCTTCTTCGAGGGTGAAAA 58.935 43.478 0.00 0.00 0.00 2.29
3990 4359 3.664107 CACATCTTCTTCGAGGGTGAAA 58.336 45.455 0.00 0.00 0.00 2.69
3991 4360 2.612972 GCACATCTTCTTCGAGGGTGAA 60.613 50.000 5.31 0.12 0.00 3.18
3992 4361 1.066858 GCACATCTTCTTCGAGGGTGA 60.067 52.381 5.31 0.05 0.00 4.02
3993 4362 1.363744 GCACATCTTCTTCGAGGGTG 58.636 55.000 0.00 0.00 0.00 4.61
3994 4363 0.250513 GGCACATCTTCTTCGAGGGT 59.749 55.000 0.00 0.00 0.00 4.34
3995 4364 0.807667 CGGCACATCTTCTTCGAGGG 60.808 60.000 0.00 0.00 0.00 4.30
3996 4365 0.807667 CCGGCACATCTTCTTCGAGG 60.808 60.000 0.00 0.00 0.00 4.63
3997 4366 0.173481 TCCGGCACATCTTCTTCGAG 59.827 55.000 0.00 0.00 0.00 4.04
3998 4367 0.606096 TTCCGGCACATCTTCTTCGA 59.394 50.000 0.00 0.00 0.00 3.71
3999 4368 0.721718 GTTCCGGCACATCTTCTTCG 59.278 55.000 0.00 0.00 0.00 3.79
4000 4369 2.100605 AGTTCCGGCACATCTTCTTC 57.899 50.000 7.08 0.00 0.00 2.87
4001 4370 2.154462 CAAGTTCCGGCACATCTTCTT 58.846 47.619 7.08 0.00 0.00 2.52
4002 4371 1.347707 TCAAGTTCCGGCACATCTTCT 59.652 47.619 7.08 0.00 0.00 2.85
4003 4372 1.464997 GTCAAGTTCCGGCACATCTTC 59.535 52.381 7.08 0.00 0.00 2.87
4004 4373 1.072331 AGTCAAGTTCCGGCACATCTT 59.928 47.619 7.08 0.00 0.00 2.40
4005 4374 0.687354 AGTCAAGTTCCGGCACATCT 59.313 50.000 7.08 0.00 0.00 2.90
4006 4375 1.464997 GAAGTCAAGTTCCGGCACATC 59.535 52.381 7.08 0.00 0.00 3.06
4007 4376 1.202758 TGAAGTCAAGTTCCGGCACAT 60.203 47.619 7.08 0.00 0.00 3.21
4008 4377 0.179234 TGAAGTCAAGTTCCGGCACA 59.821 50.000 7.08 0.00 0.00 4.57
4009 4378 1.305201 TTGAAGTCAAGTTCCGGCAC 58.695 50.000 0.00 0.00 0.00 5.01
4010 4379 2.151202 GATTGAAGTCAAGTTCCGGCA 58.849 47.619 0.00 0.00 39.47 5.69
4011 4380 2.416893 GAGATTGAAGTCAAGTTCCGGC 59.583 50.000 0.00 0.00 39.47 6.13
4012 4381 3.003480 GGAGATTGAAGTCAAGTTCCGG 58.997 50.000 0.00 0.00 39.47 5.14
4013 4382 3.931578 AGGAGATTGAAGTCAAGTTCCG 58.068 45.455 15.47 0.00 42.39 4.30
4014 4383 7.745620 TTTAAGGAGATTGAAGTCAAGTTCC 57.254 36.000 14.37 14.37 40.08 3.62
4017 4386 9.579932 AGAATTTTAAGGAGATTGAAGTCAAGT 57.420 29.630 0.00 0.00 39.47 3.16
4018 4387 9.837525 CAGAATTTTAAGGAGATTGAAGTCAAG 57.162 33.333 0.00 0.00 39.47 3.02
4019 4388 8.796475 CCAGAATTTTAAGGAGATTGAAGTCAA 58.204 33.333 0.00 0.00 40.51 3.18
4020 4389 7.944554 ACCAGAATTTTAAGGAGATTGAAGTCA 59.055 33.333 0.00 0.00 0.00 3.41
4021 4390 8.239998 CACCAGAATTTTAAGGAGATTGAAGTC 58.760 37.037 0.00 0.00 0.00 3.01
4022 4391 7.177392 CCACCAGAATTTTAAGGAGATTGAAGT 59.823 37.037 0.00 0.00 0.00 3.01
4023 4392 7.363268 CCCACCAGAATTTTAAGGAGATTGAAG 60.363 40.741 0.00 0.00 0.00 3.02
4024 4393 6.437162 CCCACCAGAATTTTAAGGAGATTGAA 59.563 38.462 0.00 0.00 0.00 2.69
4025 4394 5.951747 CCCACCAGAATTTTAAGGAGATTGA 59.048 40.000 0.00 0.00 0.00 2.57
4026 4395 5.394553 GCCCACCAGAATTTTAAGGAGATTG 60.395 44.000 0.00 0.00 0.00 2.67
4027 4396 4.711846 GCCCACCAGAATTTTAAGGAGATT 59.288 41.667 0.00 0.00 0.00 2.40
4028 4397 4.017130 AGCCCACCAGAATTTTAAGGAGAT 60.017 41.667 0.00 0.00 0.00 2.75
4029 4398 3.333680 AGCCCACCAGAATTTTAAGGAGA 59.666 43.478 0.00 0.00 0.00 3.71
4030 4399 3.445096 CAGCCCACCAGAATTTTAAGGAG 59.555 47.826 0.00 0.00 0.00 3.69
4031 4400 3.430453 CAGCCCACCAGAATTTTAAGGA 58.570 45.455 0.00 0.00 0.00 3.36
4032 4401 2.094026 GCAGCCCACCAGAATTTTAAGG 60.094 50.000 0.00 0.00 0.00 2.69
4033 4402 2.562298 TGCAGCCCACCAGAATTTTAAG 59.438 45.455 0.00 0.00 0.00 1.85
4034 4403 2.603021 TGCAGCCCACCAGAATTTTAA 58.397 42.857 0.00 0.00 0.00 1.52
4035 4404 2.300956 TGCAGCCCACCAGAATTTTA 57.699 45.000 0.00 0.00 0.00 1.52
4036 4405 1.422531 TTGCAGCCCACCAGAATTTT 58.577 45.000 0.00 0.00 0.00 1.82
4037 4406 1.276989 CATTGCAGCCCACCAGAATTT 59.723 47.619 0.00 0.00 0.00 1.82
4038 4407 0.899720 CATTGCAGCCCACCAGAATT 59.100 50.000 0.00 0.00 0.00 2.17
4039 4408 0.040058 TCATTGCAGCCCACCAGAAT 59.960 50.000 0.00 0.00 0.00 2.40
4040 4409 0.178967 TTCATTGCAGCCCACCAGAA 60.179 50.000 0.00 0.00 0.00 3.02
4041 4410 0.895100 GTTCATTGCAGCCCACCAGA 60.895 55.000 0.00 0.00 0.00 3.86
4042 4411 1.588082 GTTCATTGCAGCCCACCAG 59.412 57.895 0.00 0.00 0.00 4.00
4043 4412 2.267351 CGTTCATTGCAGCCCACCA 61.267 57.895 0.00 0.00 0.00 4.17
4044 4413 2.568090 CGTTCATTGCAGCCCACC 59.432 61.111 0.00 0.00 0.00 4.61
4045 4414 2.268076 ACCGTTCATTGCAGCCCAC 61.268 57.895 0.00 0.00 0.00 4.61
4046 4415 2.115052 ACCGTTCATTGCAGCCCA 59.885 55.556 0.00 0.00 0.00 5.36
4047 4416 1.315257 ATCACCGTTCATTGCAGCCC 61.315 55.000 0.00 0.00 0.00 5.19
4048 4417 1.331756 CTATCACCGTTCATTGCAGCC 59.668 52.381 0.00 0.00 0.00 4.85
4049 4418 1.331756 CCTATCACCGTTCATTGCAGC 59.668 52.381 0.00 0.00 0.00 5.25
4050 4419 2.905075 TCCTATCACCGTTCATTGCAG 58.095 47.619 0.00 0.00 0.00 4.41
4051 4420 3.342377 TTCCTATCACCGTTCATTGCA 57.658 42.857 0.00 0.00 0.00 4.08
4052 4421 3.689649 ACTTTCCTATCACCGTTCATTGC 59.310 43.478 0.00 0.00 0.00 3.56
4053 4422 4.437390 GCACTTTCCTATCACCGTTCATTG 60.437 45.833 0.00 0.00 0.00 2.82
4054 4423 3.689649 GCACTTTCCTATCACCGTTCATT 59.310 43.478 0.00 0.00 0.00 2.57
4055 4424 3.270877 GCACTTTCCTATCACCGTTCAT 58.729 45.455 0.00 0.00 0.00 2.57
4056 4425 2.037902 TGCACTTTCCTATCACCGTTCA 59.962 45.455 0.00 0.00 0.00 3.18
4057 4426 2.695359 TGCACTTTCCTATCACCGTTC 58.305 47.619 0.00 0.00 0.00 3.95
4058 4427 2.851263 TGCACTTTCCTATCACCGTT 57.149 45.000 0.00 0.00 0.00 4.44
4059 4428 3.009723 CAATGCACTTTCCTATCACCGT 58.990 45.455 0.00 0.00 0.00 4.83
4060 4429 2.355756 CCAATGCACTTTCCTATCACCG 59.644 50.000 0.00 0.00 0.00 4.94
4061 4430 3.620488 TCCAATGCACTTTCCTATCACC 58.380 45.455 0.00 0.00 0.00 4.02
4062 4431 5.585390 CAATCCAATGCACTTTCCTATCAC 58.415 41.667 0.00 0.00 0.00 3.06
4063 4432 4.098349 GCAATCCAATGCACTTTCCTATCA 59.902 41.667 0.00 0.00 45.70 2.15
4064 4433 4.614946 GCAATCCAATGCACTTTCCTATC 58.385 43.478 0.00 0.00 45.70 2.08
4065 4434 4.660789 GCAATCCAATGCACTTTCCTAT 57.339 40.909 0.00 0.00 45.70 2.57
4075 4444 0.971959 TGTCCCAGGCAATCCAATGC 60.972 55.000 0.00 0.00 45.67 3.56
4076 4445 1.559368 TTGTCCCAGGCAATCCAATG 58.441 50.000 0.00 0.00 33.74 2.82
4077 4446 2.323999 TTTGTCCCAGGCAATCCAAT 57.676 45.000 0.00 0.00 33.74 3.16
4078 4447 2.094100 TTTTGTCCCAGGCAATCCAA 57.906 45.000 0.00 0.00 33.74 3.53
4079 4448 1.901159 CATTTTGTCCCAGGCAATCCA 59.099 47.619 0.00 0.00 33.74 3.41
4080 4449 1.901833 ACATTTTGTCCCAGGCAATCC 59.098 47.619 0.00 0.00 0.00 3.01
4081 4450 2.932187 GCACATTTTGTCCCAGGCAATC 60.932 50.000 0.00 0.00 0.00 2.67
4082 4451 1.002315 GCACATTTTGTCCCAGGCAAT 59.998 47.619 0.00 0.00 0.00 3.56
4083 4452 0.392336 GCACATTTTGTCCCAGGCAA 59.608 50.000 0.00 0.00 0.00 4.52
4084 4453 1.470996 GGCACATTTTGTCCCAGGCA 61.471 55.000 0.00 0.00 0.00 4.75
4085 4454 1.293179 GGCACATTTTGTCCCAGGC 59.707 57.895 0.00 0.00 0.00 4.85
4086 4455 0.604578 CTGGCACATTTTGTCCCAGG 59.395 55.000 9.36 0.00 38.20 4.45
4087 4456 1.270550 GACTGGCACATTTTGTCCCAG 59.729 52.381 14.62 14.62 38.20 4.45
4088 4457 1.133513 AGACTGGCACATTTTGTCCCA 60.134 47.619 0.00 0.00 38.20 4.37
4089 4458 1.620822 AGACTGGCACATTTTGTCCC 58.379 50.000 0.00 0.00 38.20 4.46
4090 4459 3.412386 AGTAGACTGGCACATTTTGTCC 58.588 45.455 0.00 0.00 38.20 4.02
4091 4460 4.319177 AGAGTAGACTGGCACATTTTGTC 58.681 43.478 0.00 0.00 38.20 3.18
4092 4461 4.357918 AGAGTAGACTGGCACATTTTGT 57.642 40.909 0.00 0.00 38.20 2.83
4093 4462 6.603095 GTTTAGAGTAGACTGGCACATTTTG 58.397 40.000 0.00 0.00 38.20 2.44
4094 4463 6.803154 GTTTAGAGTAGACTGGCACATTTT 57.197 37.500 0.00 0.00 38.20 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.