Multiple sequence alignment - TraesCS2B01G233800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G233800 chr2B 100.000 6211 0 0 1 6211 232346194 232352404 0.000000e+00 11470.0
1 TraesCS2B01G233800 chr2D 95.722 4371 98 33 355 4694 164997184 164992872 0.000000e+00 6953.0
2 TraesCS2B01G233800 chr2D 97.263 1169 24 6 5049 6211 164992263 164991097 0.000000e+00 1975.0
3 TraesCS2B01G233800 chr2D 95.028 181 5 2 4875 5052 164992724 164992545 1.320000e-71 281.0
4 TraesCS2B01G233800 chr2D 96.000 100 2 1 4777 4876 164992871 164992774 1.790000e-35 161.0
5 TraesCS2B01G233800 chr2D 93.443 61 2 2 4860 4919 23143472 23143413 8.580000e-14 89.8
6 TraesCS2B01G233800 chr2A 97.795 2449 36 5 1196 3629 185725446 185727891 0.000000e+00 4207.0
7 TraesCS2B01G233800 chr2A 96.378 994 29 5 4875 5863 185729149 185730140 0.000000e+00 1629.0
8 TraesCS2B01G233800 chr2A 94.329 1058 31 15 3647 4694 185727962 185729000 0.000000e+00 1594.0
9 TraesCS2B01G233800 chr2A 88.344 815 36 25 359 1166 185724688 185725450 0.000000e+00 924.0
10 TraesCS2B01G233800 chr2A 96.129 155 4 2 5899 6053 185730136 185730288 1.030000e-62 252.0
11 TraesCS2B01G233800 chr2A 96.774 93 3 0 6117 6209 185730464 185730556 8.340000e-34 156.0
12 TraesCS2B01G233800 chr2A 93.000 100 5 1 4777 4876 185729001 185729098 1.800000e-30 145.0
13 TraesCS2B01G233800 chr2A 93.243 74 3 2 6042 6114 185730306 185730378 2.370000e-19 108.0
14 TraesCS2B01G233800 chr2A 93.333 60 1 3 4859 4916 40430394 40430336 1.110000e-12 86.1
15 TraesCS2B01G233800 chr3A 85.347 778 53 29 5243 5985 548009674 548008923 0.000000e+00 749.0
16 TraesCS2B01G233800 chr3A 92.973 185 11 2 5991 6174 548007998 548007815 1.030000e-67 268.0
17 TraesCS2B01G233800 chr5D 95.146 103 3 2 4676 4777 120889982 120889881 1.790000e-35 161.0
18 TraesCS2B01G233800 chr7A 94.286 105 5 1 4685 4788 80994074 80994178 6.440000e-35 159.0
19 TraesCS2B01G233800 chr5B 96.907 97 0 2 4681 4777 135750742 135750649 6.440000e-35 159.0
20 TraesCS2B01G233800 chr5B 92.000 100 7 1 4060 4159 441635851 441635949 8.400000e-29 139.0
21 TraesCS2B01G233800 chr5B 91.176 68 2 4 4859 4924 615616603 615616668 8.580000e-14 89.8
22 TraesCS2B01G233800 chrUn 93.333 105 5 2 4688 4791 332204430 332204533 3.000000e-33 154.0
23 TraesCS2B01G233800 chrUn 92.593 108 6 2 4688 4794 332213812 332213706 3.000000e-33 154.0
24 TraesCS2B01G233800 chrUn 93.333 105 5 2 4688 4791 373754883 373754986 3.000000e-33 154.0
25 TraesCS2B01G233800 chr4A 94.118 102 5 1 4692 4793 43612763 43612663 3.000000e-33 154.0
26 TraesCS2B01G233800 chr1D 92.661 109 4 4 4672 4778 234329147 234329041 3.000000e-33 154.0
27 TraesCS2B01G233800 chr1D 87.500 72 7 2 4860 4931 476449423 476449354 1.430000e-11 82.4
28 TraesCS2B01G233800 chr6D 88.281 128 11 4 4680 4804 382611076 382611202 3.880000e-32 150.0
29 TraesCS2B01G233800 chr6D 86.047 129 15 3 4037 4163 53580987 53581114 1.090000e-27 135.0
30 TraesCS2B01G233800 chr5A 93.548 93 6 0 4067 4159 474814295 474814387 8.400000e-29 139.0
31 TraesCS2B01G233800 chr5A 94.444 36 2 0 4067 4102 30557752 30557717 8.700000e-04 56.5
32 TraesCS2B01G233800 chr7D 90.769 65 3 3 4860 4922 519264602 519264539 3.990000e-12 84.2
33 TraesCS2B01G233800 chr4B 93.220 59 1 3 4860 4916 104337358 104337415 3.990000e-12 84.2
34 TraesCS2B01G233800 chr6B 83.908 87 12 2 2794 2879 317887186 317887271 1.430000e-11 82.4
35 TraesCS2B01G233800 chr1A 86.486 74 6 4 4860 4930 224815570 224815642 1.860000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G233800 chr2B 232346194 232352404 6210 False 11470.000 11470 100.00000 1 6211 1 chr2B.!!$F1 6210
1 TraesCS2B01G233800 chr2D 164991097 164997184 6087 True 2342.500 6953 96.00325 355 6211 4 chr2D.!!$R2 5856
2 TraesCS2B01G233800 chr2A 185724688 185730556 5868 False 1126.875 4207 94.49900 359 6209 8 chr2A.!!$F1 5850
3 TraesCS2B01G233800 chr3A 548007815 548009674 1859 True 508.500 749 89.16000 5243 6174 2 chr3A.!!$R1 931

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
29 30 0.036010 AGTGGAGATGGCAACTTCGG 60.036 55.0 0.00 0.00 45.04 4.30 F
205 206 0.036671 GACCCCGGAGTGGTTAAGTG 60.037 60.0 0.73 0.00 35.85 3.16 F
346 347 0.098728 AAACAACGCAGTCAGCACAC 59.901 50.0 0.00 0.00 45.00 3.82 F
1148 1160 0.179215 CGACACGGCTTTGCTGAATC 60.179 55.0 5.31 1.78 38.46 2.52 F
1866 1893 0.106708 TGAAGCGGCCCAGTCATATC 59.893 55.0 0.00 0.00 0.00 1.63 F
2501 2528 0.450983 GATCGTCCCGACTCGAACTT 59.549 55.0 0.00 0.00 39.18 2.66 F
3808 3889 0.179100 TCCGTCAGCTTAGATGCAGC 60.179 55.0 0.00 0.00 37.56 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1046 1058 0.736053 CGGAGAGACGAGAAGGAAGG 59.264 60.000 0.00 0.00 35.47 3.46 R
1047 1059 1.455248 ACGGAGAGACGAGAAGGAAG 58.545 55.000 0.00 0.00 37.61 3.46 R
1830 1857 1.686355 TCAACGTCAATTGGCCTTGT 58.314 45.000 17.53 2.98 0.00 3.16 R
3014 3041 0.906066 TAAGGCTAACCATGGTGCGA 59.094 50.000 20.60 6.17 39.06 5.10 R
3808 3889 0.940126 GCCAACATATCTGGACTGCG 59.060 55.000 4.77 0.00 35.85 5.18 R
3966 4055 1.373570 CTCCGAATCTGAGGCCAAAC 58.626 55.000 5.01 0.00 0.00 2.93 R
5512 5946 2.159382 GCAGCAAACTACCTAAAGGCA 58.841 47.619 0.00 0.00 39.32 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.732412 CGCCTACCATAGTGGAGATG 57.268 55.000 2.45 0.00 40.96 2.90
21 22 1.002544 GCCTACCATAGTGGAGATGGC 59.997 57.143 2.45 6.74 46.76 4.40
22 23 2.329267 CCTACCATAGTGGAGATGGCA 58.671 52.381 2.45 0.00 46.76 4.92
23 24 2.705658 CCTACCATAGTGGAGATGGCAA 59.294 50.000 2.45 0.00 46.76 4.52
24 25 2.717639 ACCATAGTGGAGATGGCAAC 57.282 50.000 2.45 0.00 46.76 4.17
25 26 2.200081 ACCATAGTGGAGATGGCAACT 58.800 47.619 0.00 0.00 46.76 3.16
26 27 2.578021 ACCATAGTGGAGATGGCAACTT 59.422 45.455 2.45 0.00 46.76 2.66
27 28 3.209410 CCATAGTGGAGATGGCAACTTC 58.791 50.000 0.00 0.00 40.96 3.01
28 29 2.672961 TAGTGGAGATGGCAACTTCG 57.327 50.000 0.00 0.00 45.04 3.79
29 30 0.036010 AGTGGAGATGGCAACTTCGG 60.036 55.000 0.00 0.00 45.04 4.30
30 31 1.026718 GTGGAGATGGCAACTTCGGG 61.027 60.000 0.00 0.00 45.04 5.14
31 32 1.198094 TGGAGATGGCAACTTCGGGA 61.198 55.000 0.00 0.00 45.04 5.14
32 33 0.744771 GGAGATGGCAACTTCGGGAC 60.745 60.000 0.00 0.00 45.04 4.46
33 34 0.744771 GAGATGGCAACTTCGGGACC 60.745 60.000 0.00 0.00 45.04 4.46
34 35 1.002624 GATGGCAACTTCGGGACCA 60.003 57.895 0.00 0.00 37.61 4.02
35 36 1.002134 ATGGCAACTTCGGGACCAG 60.002 57.895 0.00 0.00 33.03 4.00
36 37 2.359975 GGCAACTTCGGGACCAGG 60.360 66.667 0.00 0.00 0.00 4.45
37 38 2.359975 GCAACTTCGGGACCAGGG 60.360 66.667 0.00 0.00 0.00 4.45
38 39 2.890766 GCAACTTCGGGACCAGGGA 61.891 63.158 0.00 0.00 0.00 4.20
39 40 1.991230 CAACTTCGGGACCAGGGAT 59.009 57.895 0.00 0.00 0.00 3.85
40 41 0.107654 CAACTTCGGGACCAGGGATC 60.108 60.000 0.00 0.00 0.00 3.36
41 42 1.272554 AACTTCGGGACCAGGGATCC 61.273 60.000 1.92 1.92 35.28 3.36
42 43 2.762459 TTCGGGACCAGGGATCCG 60.762 66.667 5.45 14.48 43.42 4.18
44 45 3.227276 CGGGACCAGGGATCCGAG 61.227 72.222 5.45 0.00 44.69 4.63
45 46 2.844839 GGGACCAGGGATCCGAGG 60.845 72.222 17.14 17.14 37.08 4.63
46 47 2.282446 GGACCAGGGATCCGAGGA 59.718 66.667 23.64 0.00 0.00 3.71
47 48 1.382695 GGACCAGGGATCCGAGGAA 60.383 63.158 23.64 0.00 0.00 3.36
48 49 1.687297 GGACCAGGGATCCGAGGAAC 61.687 65.000 23.64 16.67 0.00 3.62
49 50 2.017559 GACCAGGGATCCGAGGAACG 62.018 65.000 23.64 2.73 42.18 3.95
58 59 2.264794 CGAGGAACGGGTTGGAGG 59.735 66.667 0.00 0.00 38.46 4.30
59 60 2.046217 GAGGAACGGGTTGGAGGC 60.046 66.667 0.00 0.00 0.00 4.70
60 61 2.852075 AGGAACGGGTTGGAGGCA 60.852 61.111 0.00 0.00 0.00 4.75
61 62 2.198304 GAGGAACGGGTTGGAGGCAT 62.198 60.000 0.00 0.00 0.00 4.40
62 63 1.749258 GGAACGGGTTGGAGGCATC 60.749 63.158 0.00 0.00 0.00 3.91
63 64 1.002624 GAACGGGTTGGAGGCATCA 60.003 57.895 0.00 0.00 0.00 3.07
64 65 0.394352 GAACGGGTTGGAGGCATCAT 60.394 55.000 0.00 0.00 0.00 2.45
65 66 0.680921 AACGGGTTGGAGGCATCATG 60.681 55.000 0.00 0.00 0.00 3.07
66 67 1.077501 CGGGTTGGAGGCATCATGT 60.078 57.895 0.00 0.00 0.00 3.21
67 68 0.680921 CGGGTTGGAGGCATCATGTT 60.681 55.000 0.00 0.00 0.00 2.71
68 69 0.819582 GGGTTGGAGGCATCATGTTG 59.180 55.000 0.00 0.00 0.00 3.33
69 70 1.616725 GGGTTGGAGGCATCATGTTGA 60.617 52.381 7.98 0.00 0.00 3.18
70 71 1.747355 GGTTGGAGGCATCATGTTGAG 59.253 52.381 7.98 0.00 0.00 3.02
71 72 1.747355 GTTGGAGGCATCATGTTGAGG 59.253 52.381 7.98 0.00 0.00 3.86
79 80 3.976793 CATCATGTTGAGGCACCATAC 57.023 47.619 0.00 0.00 0.00 2.39
80 81 3.281158 CATCATGTTGAGGCACCATACA 58.719 45.455 0.00 0.00 0.00 2.29
81 82 3.650281 TCATGTTGAGGCACCATACAT 57.350 42.857 0.00 0.00 0.00 2.29
82 83 3.544684 TCATGTTGAGGCACCATACATC 58.455 45.455 0.00 0.00 0.00 3.06
83 84 2.418368 TGTTGAGGCACCATACATCC 57.582 50.000 0.00 0.00 0.00 3.51
84 85 1.915489 TGTTGAGGCACCATACATCCT 59.085 47.619 0.00 0.00 0.00 3.24
85 86 2.092968 TGTTGAGGCACCATACATCCTC 60.093 50.000 0.00 0.00 44.04 3.71
86 87 0.752658 TGAGGCACCATACATCCTCG 59.247 55.000 0.00 0.00 46.10 4.63
87 88 0.601311 GAGGCACCATACATCCTCGC 60.601 60.000 0.00 0.00 36.18 5.03
88 89 1.598130 GGCACCATACATCCTCGCC 60.598 63.158 0.00 0.00 0.00 5.54
89 90 1.146041 GCACCATACATCCTCGCCA 59.854 57.895 0.00 0.00 0.00 5.69
90 91 1.160329 GCACCATACATCCTCGCCAC 61.160 60.000 0.00 0.00 0.00 5.01
91 92 0.532862 CACCATACATCCTCGCCACC 60.533 60.000 0.00 0.00 0.00 4.61
92 93 0.980754 ACCATACATCCTCGCCACCA 60.981 55.000 0.00 0.00 0.00 4.17
93 94 0.532862 CCATACATCCTCGCCACCAC 60.533 60.000 0.00 0.00 0.00 4.16
94 95 0.177836 CATACATCCTCGCCACCACA 59.822 55.000 0.00 0.00 0.00 4.17
95 96 0.908910 ATACATCCTCGCCACCACAA 59.091 50.000 0.00 0.00 0.00 3.33
96 97 0.908910 TACATCCTCGCCACCACAAT 59.091 50.000 0.00 0.00 0.00 2.71
97 98 0.392998 ACATCCTCGCCACCACAATC 60.393 55.000 0.00 0.00 0.00 2.67
98 99 1.097547 CATCCTCGCCACCACAATCC 61.098 60.000 0.00 0.00 0.00 3.01
99 100 2.593468 ATCCTCGCCACCACAATCCG 62.593 60.000 0.00 0.00 0.00 4.18
100 101 3.499737 CTCGCCACCACAATCCGC 61.500 66.667 0.00 0.00 0.00 5.54
105 106 3.803082 CACCACAATCCGCCGCTG 61.803 66.667 0.00 0.00 0.00 5.18
117 118 4.069869 CCGCTGGGCATTATCCTG 57.930 61.111 0.00 0.00 0.00 3.86
118 119 1.601759 CCGCTGGGCATTATCCTGG 60.602 63.158 0.00 0.00 0.00 4.45
119 120 2.263741 CGCTGGGCATTATCCTGGC 61.264 63.158 0.00 0.00 40.76 4.85
120 121 1.152368 GCTGGGCATTATCCTGGCT 59.848 57.895 0.00 0.00 41.22 4.75
121 122 1.177256 GCTGGGCATTATCCTGGCTG 61.177 60.000 0.00 0.00 41.22 4.85
122 123 1.152694 TGGGCATTATCCTGGCTGC 60.153 57.895 0.00 0.00 41.22 5.25
123 124 3.769201 GGCATTATCCTGGCTGCC 58.231 61.111 12.87 12.87 46.54 4.85
124 125 4.916358 GCATTATCCTGGCTGCCT 57.084 55.556 21.03 1.26 0.00 4.75
125 126 2.638744 GCATTATCCTGGCTGCCTC 58.361 57.895 21.03 0.00 0.00 4.70
126 127 0.892814 GCATTATCCTGGCTGCCTCC 60.893 60.000 21.03 0.00 0.00 4.30
127 128 0.604780 CATTATCCTGGCTGCCTCCG 60.605 60.000 21.03 8.15 0.00 4.63
128 129 0.764369 ATTATCCTGGCTGCCTCCGA 60.764 55.000 21.03 12.36 0.00 4.55
129 130 1.686325 TTATCCTGGCTGCCTCCGAC 61.686 60.000 21.03 0.00 0.00 4.79
132 133 4.803426 CTGGCTGCCTCCGACGAC 62.803 72.222 21.03 0.00 0.00 4.34
136 137 4.813526 CTGCCTCCGACGACGACG 62.814 72.222 12.66 12.66 42.66 5.12
138 139 4.808238 GCCTCCGACGACGACGAC 62.808 72.222 20.63 7.02 42.66 4.34
144 145 2.856032 GACGACGACGACGAGGAA 59.144 61.111 25.15 0.00 42.66 3.36
145 146 1.225691 GACGACGACGACGAGGAAG 60.226 63.158 25.15 2.87 42.66 3.46
146 147 2.097918 CGACGACGACGAGGAAGG 59.902 66.667 15.32 0.00 42.66 3.46
147 148 2.484203 GACGACGACGAGGAAGGG 59.516 66.667 15.32 0.00 42.66 3.95
148 149 2.033141 ACGACGACGAGGAAGGGA 59.967 61.111 15.32 0.00 42.66 4.20
149 150 1.979831 GACGACGACGAGGAAGGGAG 61.980 65.000 15.32 0.00 42.66 4.30
150 151 2.039405 CGACGACGAGGAAGGGAGT 61.039 63.158 0.00 0.00 42.66 3.85
151 152 0.742281 CGACGACGAGGAAGGGAGTA 60.742 60.000 0.00 0.00 42.66 2.59
152 153 1.015868 GACGACGAGGAAGGGAGTAG 58.984 60.000 0.00 0.00 0.00 2.57
153 154 0.327591 ACGACGAGGAAGGGAGTAGT 59.672 55.000 0.00 0.00 0.00 2.73
154 155 0.733729 CGACGAGGAAGGGAGTAGTG 59.266 60.000 0.00 0.00 0.00 2.74
155 156 1.104630 GACGAGGAAGGGAGTAGTGG 58.895 60.000 0.00 0.00 0.00 4.00
156 157 0.702902 ACGAGGAAGGGAGTAGTGGA 59.297 55.000 0.00 0.00 0.00 4.02
157 158 1.341187 ACGAGGAAGGGAGTAGTGGAG 60.341 57.143 0.00 0.00 0.00 3.86
158 159 1.783071 GAGGAAGGGAGTAGTGGAGG 58.217 60.000 0.00 0.00 0.00 4.30
159 160 0.325765 AGGAAGGGAGTAGTGGAGGC 60.326 60.000 0.00 0.00 0.00 4.70
160 161 0.617820 GGAAGGGAGTAGTGGAGGCA 60.618 60.000 0.00 0.00 0.00 4.75
161 162 1.276622 GAAGGGAGTAGTGGAGGCAA 58.723 55.000 0.00 0.00 0.00 4.52
162 163 1.628846 GAAGGGAGTAGTGGAGGCAAA 59.371 52.381 0.00 0.00 0.00 3.68
163 164 1.280457 AGGGAGTAGTGGAGGCAAAG 58.720 55.000 0.00 0.00 0.00 2.77
164 165 0.253327 GGGAGTAGTGGAGGCAAAGG 59.747 60.000 0.00 0.00 0.00 3.11
165 166 0.393132 GGAGTAGTGGAGGCAAAGGC 60.393 60.000 0.00 0.00 40.13 4.35
166 167 0.615850 GAGTAGTGGAGGCAAAGGCT 59.384 55.000 0.00 0.00 42.48 4.58
167 168 0.326264 AGTAGTGGAGGCAAAGGCTG 59.674 55.000 0.00 0.00 38.98 4.85
168 169 0.036875 GTAGTGGAGGCAAAGGCTGT 59.963 55.000 0.00 0.00 38.98 4.40
169 170 0.036732 TAGTGGAGGCAAAGGCTGTG 59.963 55.000 0.00 0.00 38.98 3.66
170 171 1.228245 GTGGAGGCAAAGGCTGTGA 60.228 57.895 9.39 0.00 38.98 3.58
171 172 1.073722 TGGAGGCAAAGGCTGTGAG 59.926 57.895 9.39 0.00 38.98 3.51
172 173 2.338785 GGAGGCAAAGGCTGTGAGC 61.339 63.158 9.39 0.18 38.98 4.26
173 174 1.601759 GAGGCAAAGGCTGTGAGCA 60.602 57.895 9.39 0.00 44.75 4.26
174 175 1.584380 GAGGCAAAGGCTGTGAGCAG 61.584 60.000 9.39 0.00 44.75 4.24
201 202 2.681064 CGGACCCCGGAGTGGTTA 60.681 66.667 0.73 0.00 44.15 2.85
202 203 2.285024 CGGACCCCGGAGTGGTTAA 61.285 63.158 0.73 0.00 44.15 2.01
203 204 1.600638 GGACCCCGGAGTGGTTAAG 59.399 63.158 0.73 0.00 35.85 1.85
204 205 1.196766 GGACCCCGGAGTGGTTAAGT 61.197 60.000 0.73 0.00 35.85 2.24
205 206 0.036671 GACCCCGGAGTGGTTAAGTG 60.037 60.000 0.73 0.00 35.85 3.16
206 207 0.765519 ACCCCGGAGTGGTTAAGTGT 60.766 55.000 0.73 0.00 35.15 3.55
207 208 0.399075 CCCCGGAGTGGTTAAGTGTT 59.601 55.000 0.73 0.00 35.15 3.32
208 209 1.202842 CCCCGGAGTGGTTAAGTGTTT 60.203 52.381 0.73 0.00 35.15 2.83
209 210 1.877443 CCCGGAGTGGTTAAGTGTTTG 59.123 52.381 0.73 0.00 35.15 2.93
210 211 2.567985 CCGGAGTGGTTAAGTGTTTGT 58.432 47.619 0.00 0.00 0.00 2.83
211 212 3.494749 CCCGGAGTGGTTAAGTGTTTGTA 60.495 47.826 0.73 0.00 35.15 2.41
212 213 4.128643 CCGGAGTGGTTAAGTGTTTGTAA 58.871 43.478 0.00 0.00 0.00 2.41
213 214 4.024641 CCGGAGTGGTTAAGTGTTTGTAAC 60.025 45.833 0.00 0.00 0.00 2.50
214 215 4.024641 CGGAGTGGTTAAGTGTTTGTAACC 60.025 45.833 5.78 5.78 46.40 2.85
219 220 5.128992 GGTTAAGTGTTTGTAACCATGGG 57.871 43.478 18.09 0.00 45.78 4.00
220 221 4.585581 GGTTAAGTGTTTGTAACCATGGGT 59.414 41.667 18.09 13.37 45.78 4.51
221 222 5.508320 GGTTAAGTGTTTGTAACCATGGGTG 60.508 44.000 14.24 0.00 45.78 4.61
230 231 4.792066 CCATGGGTGGGCTGATTT 57.208 55.556 2.85 0.00 42.11 2.17
231 232 2.995480 CCATGGGTGGGCTGATTTT 58.005 52.632 2.85 0.00 42.11 1.82
232 233 1.278537 CCATGGGTGGGCTGATTTTT 58.721 50.000 2.85 0.00 42.11 1.94
233 234 1.065998 CCATGGGTGGGCTGATTTTTG 60.066 52.381 2.85 0.00 42.11 2.44
234 235 1.901159 CATGGGTGGGCTGATTTTTGA 59.099 47.619 0.00 0.00 0.00 2.69
235 236 2.323999 TGGGTGGGCTGATTTTTGAT 57.676 45.000 0.00 0.00 0.00 2.57
236 237 3.464720 TGGGTGGGCTGATTTTTGATA 57.535 42.857 0.00 0.00 0.00 2.15
237 238 3.096092 TGGGTGGGCTGATTTTTGATAC 58.904 45.455 0.00 0.00 0.00 2.24
238 239 2.430694 GGGTGGGCTGATTTTTGATACC 59.569 50.000 0.00 0.00 0.00 2.73
239 240 3.365472 GGTGGGCTGATTTTTGATACCT 58.635 45.455 0.00 0.00 0.00 3.08
240 241 3.769300 GGTGGGCTGATTTTTGATACCTT 59.231 43.478 0.00 0.00 0.00 3.50
241 242 4.142160 GGTGGGCTGATTTTTGATACCTTC 60.142 45.833 0.00 0.00 0.00 3.46
242 243 4.023291 TGGGCTGATTTTTGATACCTTCC 58.977 43.478 0.00 0.00 0.00 3.46
243 244 3.066760 GGGCTGATTTTTGATACCTTCCG 59.933 47.826 0.00 0.00 0.00 4.30
244 245 3.945285 GGCTGATTTTTGATACCTTCCGA 59.055 43.478 0.00 0.00 0.00 4.55
245 246 4.580580 GGCTGATTTTTGATACCTTCCGAT 59.419 41.667 0.00 0.00 0.00 4.18
246 247 5.763204 GGCTGATTTTTGATACCTTCCGATA 59.237 40.000 0.00 0.00 0.00 2.92
247 248 6.431234 GGCTGATTTTTGATACCTTCCGATAT 59.569 38.462 0.00 0.00 0.00 1.63
248 249 7.040409 GGCTGATTTTTGATACCTTCCGATATT 60.040 37.037 0.00 0.00 0.00 1.28
249 250 8.352942 GCTGATTTTTGATACCTTCCGATATTT 58.647 33.333 0.00 0.00 0.00 1.40
254 255 9.854668 TTTTTGATACCTTCCGATATTTATCCA 57.145 29.630 0.00 0.00 0.00 3.41
255 256 9.854668 TTTTGATACCTTCCGATATTTATCCAA 57.145 29.630 0.00 0.00 0.00 3.53
256 257 9.502091 TTTGATACCTTCCGATATTTATCCAAG 57.498 33.333 0.00 0.00 0.00 3.61
257 258 8.202461 TGATACCTTCCGATATTTATCCAAGT 57.798 34.615 0.00 0.00 0.00 3.16
258 259 8.656806 TGATACCTTCCGATATTTATCCAAGTT 58.343 33.333 0.00 0.00 0.00 2.66
275 276 5.477510 CCAAGTTATAAATTGGCTTGCACA 58.522 37.500 26.60 0.00 45.60 4.57
276 277 6.108015 CCAAGTTATAAATTGGCTTGCACAT 58.892 36.000 26.60 0.00 45.60 3.21
277 278 6.594937 CCAAGTTATAAATTGGCTTGCACATT 59.405 34.615 26.60 0.00 45.60 2.71
278 279 7.763528 CCAAGTTATAAATTGGCTTGCACATTA 59.236 33.333 26.60 0.00 45.60 1.90
279 280 9.316730 CAAGTTATAAATTGGCTTGCACATTAT 57.683 29.630 16.07 0.00 30.93 1.28
280 281 9.533253 AAGTTATAAATTGGCTTGCACATTATC 57.467 29.630 0.00 0.00 0.00 1.75
281 282 7.862372 AGTTATAAATTGGCTTGCACATTATCG 59.138 33.333 0.00 0.00 0.00 2.92
282 283 4.717233 AAATTGGCTTGCACATTATCGA 57.283 36.364 0.00 0.00 0.00 3.59
283 284 3.698029 ATTGGCTTGCACATTATCGAC 57.302 42.857 0.00 0.00 0.00 4.20
284 285 2.401583 TGGCTTGCACATTATCGACT 57.598 45.000 0.00 0.00 0.00 4.18
285 286 2.009051 TGGCTTGCACATTATCGACTG 58.991 47.619 0.00 0.00 0.00 3.51
286 287 2.009774 GGCTTGCACATTATCGACTGT 58.990 47.619 0.00 0.00 0.00 3.55
287 288 2.420022 GGCTTGCACATTATCGACTGTT 59.580 45.455 0.00 0.00 0.00 3.16
288 289 3.621268 GGCTTGCACATTATCGACTGTTA 59.379 43.478 0.00 0.00 0.00 2.41
289 290 4.260375 GGCTTGCACATTATCGACTGTTAG 60.260 45.833 0.00 0.00 0.00 2.34
290 291 4.330074 GCTTGCACATTATCGACTGTTAGT 59.670 41.667 0.00 0.00 0.00 2.24
291 292 5.163854 GCTTGCACATTATCGACTGTTAGTT 60.164 40.000 0.00 0.00 0.00 2.24
292 293 6.620733 GCTTGCACATTATCGACTGTTAGTTT 60.621 38.462 0.00 0.00 0.00 2.66
293 294 6.164408 TGCACATTATCGACTGTTAGTTTG 57.836 37.500 0.00 0.00 0.00 2.93
294 295 5.699001 TGCACATTATCGACTGTTAGTTTGT 59.301 36.000 0.00 0.00 0.00 2.83
295 296 6.203915 TGCACATTATCGACTGTTAGTTTGTT 59.796 34.615 0.00 0.00 0.00 2.83
296 297 7.075741 GCACATTATCGACTGTTAGTTTGTTT 58.924 34.615 0.00 0.00 0.00 2.83
297 298 8.225107 GCACATTATCGACTGTTAGTTTGTTTA 58.775 33.333 0.00 0.00 0.00 2.01
300 301 9.916397 CATTATCGACTGTTAGTTTGTTTATCC 57.084 33.333 0.00 0.00 0.00 2.59
301 302 9.661563 ATTATCGACTGTTAGTTTGTTTATCCA 57.338 29.630 0.00 0.00 0.00 3.41
302 303 6.774354 TCGACTGTTAGTTTGTTTATCCAC 57.226 37.500 0.00 0.00 0.00 4.02
303 304 6.518493 TCGACTGTTAGTTTGTTTATCCACT 58.482 36.000 0.00 0.00 0.00 4.00
304 305 6.422701 TCGACTGTTAGTTTGTTTATCCACTG 59.577 38.462 0.00 0.00 0.00 3.66
305 306 6.313744 ACTGTTAGTTTGTTTATCCACTGC 57.686 37.500 0.00 0.00 0.00 4.40
306 307 5.240844 ACTGTTAGTTTGTTTATCCACTGCC 59.759 40.000 0.00 0.00 0.00 4.85
307 308 5.381757 TGTTAGTTTGTTTATCCACTGCCT 58.618 37.500 0.00 0.00 0.00 4.75
308 309 5.830991 TGTTAGTTTGTTTATCCACTGCCTT 59.169 36.000 0.00 0.00 0.00 4.35
309 310 6.016610 TGTTAGTTTGTTTATCCACTGCCTTC 60.017 38.462 0.00 0.00 0.00 3.46
310 311 4.729868 AGTTTGTTTATCCACTGCCTTCT 58.270 39.130 0.00 0.00 0.00 2.85
311 312 5.140454 AGTTTGTTTATCCACTGCCTTCTT 58.860 37.500 0.00 0.00 0.00 2.52
312 313 5.598417 AGTTTGTTTATCCACTGCCTTCTTT 59.402 36.000 0.00 0.00 0.00 2.52
313 314 6.098266 AGTTTGTTTATCCACTGCCTTCTTTT 59.902 34.615 0.00 0.00 0.00 2.27
314 315 5.705609 TGTTTATCCACTGCCTTCTTTTC 57.294 39.130 0.00 0.00 0.00 2.29
315 316 5.385198 TGTTTATCCACTGCCTTCTTTTCT 58.615 37.500 0.00 0.00 0.00 2.52
316 317 5.833131 TGTTTATCCACTGCCTTCTTTTCTT 59.167 36.000 0.00 0.00 0.00 2.52
317 318 6.016276 TGTTTATCCACTGCCTTCTTTTCTTC 60.016 38.462 0.00 0.00 0.00 2.87
318 319 2.863809 TCCACTGCCTTCTTTTCTTCC 58.136 47.619 0.00 0.00 0.00 3.46
319 320 2.174639 TCCACTGCCTTCTTTTCTTCCA 59.825 45.455 0.00 0.00 0.00 3.53
320 321 3.160269 CCACTGCCTTCTTTTCTTCCAT 58.840 45.455 0.00 0.00 0.00 3.41
321 322 4.042809 TCCACTGCCTTCTTTTCTTCCATA 59.957 41.667 0.00 0.00 0.00 2.74
322 323 4.766891 CCACTGCCTTCTTTTCTTCCATAA 59.233 41.667 0.00 0.00 0.00 1.90
323 324 5.243730 CCACTGCCTTCTTTTCTTCCATAAA 59.756 40.000 0.00 0.00 0.00 1.40
324 325 6.385033 CACTGCCTTCTTTTCTTCCATAAAG 58.615 40.000 0.00 0.00 36.22 1.85
325 326 6.207417 CACTGCCTTCTTTTCTTCCATAAAGA 59.793 38.462 0.00 0.00 42.35 2.52
336 337 6.137794 TCTTCCATAAAGAAAAACAACGCA 57.862 33.333 0.00 0.00 41.10 5.24
337 338 6.205784 TCTTCCATAAAGAAAAACAACGCAG 58.794 36.000 0.00 0.00 41.10 5.18
338 339 5.977129 CTTCCATAAAGAAAAACAACGCAGT 59.023 36.000 0.00 0.00 39.29 4.40
339 340 5.516090 TCCATAAAGAAAAACAACGCAGTC 58.484 37.500 0.00 0.00 45.00 3.51
340 341 5.066634 TCCATAAAGAAAAACAACGCAGTCA 59.933 36.000 0.00 0.00 45.00 3.41
341 342 5.399301 CCATAAAGAAAAACAACGCAGTCAG 59.601 40.000 0.00 0.00 45.00 3.51
342 343 2.475200 AGAAAAACAACGCAGTCAGC 57.525 45.000 0.00 0.00 45.00 4.26
343 344 1.742831 AGAAAAACAACGCAGTCAGCA 59.257 42.857 0.00 0.00 45.00 4.41
344 345 1.846175 GAAAAACAACGCAGTCAGCAC 59.154 47.619 0.00 0.00 45.00 4.40
345 346 0.808125 AAAACAACGCAGTCAGCACA 59.192 45.000 0.00 0.00 45.00 4.57
346 347 0.098728 AAACAACGCAGTCAGCACAC 59.901 50.000 0.00 0.00 45.00 3.82
347 348 2.035617 AACAACGCAGTCAGCACACG 62.036 55.000 0.00 0.00 45.00 4.49
348 349 2.967076 AACGCAGTCAGCACACGG 60.967 61.111 0.00 0.00 45.00 4.94
349 350 4.969196 ACGCAGTCAGCACACGGG 62.969 66.667 0.00 0.00 46.13 5.28
352 353 4.662961 CAGTCAGCACACGGGCGA 62.663 66.667 0.00 0.00 39.27 5.54
353 354 4.363990 AGTCAGCACACGGGCGAG 62.364 66.667 0.00 0.00 39.27 5.03
361 362 0.591170 CACACGGGCGAGTTTTCAAT 59.409 50.000 0.00 0.00 0.00 2.57
394 395 2.132762 CGTACACGGCTCTTTTGACTT 58.867 47.619 0.00 0.00 35.37 3.01
395 396 2.542595 CGTACACGGCTCTTTTGACTTT 59.457 45.455 0.00 0.00 35.37 2.66
396 397 3.737266 CGTACACGGCTCTTTTGACTTTA 59.263 43.478 0.00 0.00 35.37 1.85
397 398 4.387862 CGTACACGGCTCTTTTGACTTTAT 59.612 41.667 0.00 0.00 35.37 1.40
410 411 9.710979 TCTTTTGACTTTATTTACAAACACGAG 57.289 29.630 0.00 0.00 33.09 4.18
461 462 1.186917 TCCAATGCCCAAGTTGCCAG 61.187 55.000 0.00 0.00 0.00 4.85
462 463 1.474332 CCAATGCCCAAGTTGCCAGT 61.474 55.000 0.00 0.00 0.00 4.00
463 464 0.393820 CAATGCCCAAGTTGCCAGTT 59.606 50.000 0.00 0.00 0.00 3.16
464 465 1.130777 AATGCCCAAGTTGCCAGTTT 58.869 45.000 0.00 0.00 0.00 2.66
465 466 1.130777 ATGCCCAAGTTGCCAGTTTT 58.869 45.000 0.00 0.00 0.00 2.43
503 504 3.130340 CACAAACCAAGTTGCCAACTACT 59.870 43.478 11.10 0.00 41.91 2.57
506 507 2.572290 ACCAAGTTGCCAACTACTCAC 58.428 47.619 11.10 0.00 41.91 3.51
507 508 2.092646 ACCAAGTTGCCAACTACTCACA 60.093 45.455 11.10 0.00 41.91 3.58
508 509 3.149196 CCAAGTTGCCAACTACTCACAT 58.851 45.455 11.10 0.00 41.91 3.21
509 510 3.189287 CCAAGTTGCCAACTACTCACATC 59.811 47.826 11.10 0.00 41.91 3.06
510 511 3.769739 AGTTGCCAACTACTCACATCA 57.230 42.857 8.67 0.00 40.69 3.07
512 513 3.138304 GTTGCCAACTACTCACATCACA 58.862 45.455 0.00 0.00 0.00 3.58
513 514 3.483808 TGCCAACTACTCACATCACAA 57.516 42.857 0.00 0.00 0.00 3.33
514 515 3.138304 TGCCAACTACTCACATCACAAC 58.862 45.455 0.00 0.00 0.00 3.32
515 516 2.157668 GCCAACTACTCACATCACAACG 59.842 50.000 0.00 0.00 0.00 4.10
537 538 1.874345 CTCGTTACGACCAGGCCTGT 61.874 60.000 30.63 18.82 0.00 4.00
607 613 1.973138 ACGACCGTTACATCGACAAG 58.027 50.000 12.04 0.00 40.86 3.16
612 618 2.298163 ACCGTTACATCGACAAGGAGTT 59.702 45.455 0.00 0.00 0.00 3.01
737 744 5.116983 GTGGACAACAAACAAATATCGCAAG 59.883 40.000 0.00 0.00 0.00 4.01
739 746 5.446143 ACAACAAACAAATATCGCAAGGA 57.554 34.783 0.00 0.00 38.47 3.36
740 747 5.460646 ACAACAAACAAATATCGCAAGGAG 58.539 37.500 0.00 0.00 38.47 3.69
869 881 4.144703 GGCTCCGGTTCCGAGTCC 62.145 72.222 13.08 6.38 0.00 3.85
877 889 1.305046 GTTCCGAGTCCCCTCTCCA 60.305 63.158 0.00 0.00 35.43 3.86
879 891 2.760385 CCGAGTCCCCTCTCCACC 60.760 72.222 0.00 0.00 35.43 4.61
963 975 4.924187 TGGGGTTTTGGCGGTGGG 62.924 66.667 0.00 0.00 0.00 4.61
1020 1032 2.261671 CTGCGCCTACTGTCGGTT 59.738 61.111 4.18 0.00 0.00 4.44
1044 1056 0.972883 AGAGGTGCGCTTCTTCTTCT 59.027 50.000 9.73 2.69 0.00 2.85
1045 1057 1.346068 AGAGGTGCGCTTCTTCTTCTT 59.654 47.619 9.73 0.00 0.00 2.52
1046 1058 1.729517 GAGGTGCGCTTCTTCTTCTTC 59.270 52.381 9.73 0.00 0.00 2.87
1047 1059 0.799393 GGTGCGCTTCTTCTTCTTCC 59.201 55.000 9.73 0.00 0.00 3.46
1148 1160 0.179215 CGACACGGCTTTGCTGAATC 60.179 55.000 5.31 1.78 38.46 2.52
1235 1247 1.741770 GCGTGGAATCGGAAGCTGT 60.742 57.895 0.00 0.00 0.00 4.40
1387 1399 7.985634 TTAGTTTGAAACTTTGATGCTTCAC 57.014 32.000 16.49 0.00 42.81 3.18
1405 1417 2.095692 TCACGAATGAATGCATTGTCGG 59.904 45.455 27.21 19.98 44.47 4.79
1830 1857 3.567585 TGTCAAATTCATCCGCAAGACAA 59.432 39.130 0.00 0.00 43.02 3.18
1866 1893 0.106708 TGAAGCGGCCCAGTCATATC 59.893 55.000 0.00 0.00 0.00 1.63
2298 2325 1.131315 GCAACTCGCCCTGATCTTTTC 59.869 52.381 0.00 0.00 32.94 2.29
2490 2517 2.357952 GGCCACATTAAAAGATCGTCCC 59.642 50.000 0.00 0.00 0.00 4.46
2501 2528 0.450983 GATCGTCCCGACTCGAACTT 59.549 55.000 0.00 0.00 39.18 2.66
2847 2874 3.149196 TGAGAATGGAGAAAGTGTTGCC 58.851 45.455 0.00 0.00 0.00 4.52
2850 2877 1.244019 ATGGAGAAAGTGTTGCCCGC 61.244 55.000 0.00 0.00 0.00 6.13
2907 2934 1.076549 GGACCTTGCCCACATTGGA 59.923 57.895 0.00 0.00 40.96 3.53
3360 3387 7.641411 GCTAAGTGTACGTTACGATTATCAGAA 59.359 37.037 13.03 0.00 0.00 3.02
3560 3587 5.291128 CGTTCTTGTACATAACATCTGGGTC 59.709 44.000 17.12 0.00 38.10 4.46
3720 3801 3.432326 GGTTACTCTTGCCTGACCTATGG 60.432 52.174 0.00 0.00 0.00 2.74
3767 3848 0.746204 GCCCTCTTGTTAGCTCAGGC 60.746 60.000 0.00 0.00 39.06 4.85
3792 3873 1.826385 AGGTTCATGCCTTTCTTCCG 58.174 50.000 0.00 0.00 34.71 4.30
3808 3889 0.179100 TCCGTCAGCTTAGATGCAGC 60.179 55.000 0.00 0.00 37.56 5.25
3881 3962 7.908827 TCTACTTGCATAACGTATTTTCCAA 57.091 32.000 0.00 0.00 0.00 3.53
3914 3995 6.803807 GTCTAGCTTCAATTTTGTGTCCATTC 59.196 38.462 0.00 0.00 0.00 2.67
3917 3998 4.925646 GCTTCAATTTTGTGTCCATTCCTC 59.074 41.667 0.00 0.00 0.00 3.71
3918 3999 5.467035 TTCAATTTTGTGTCCATTCCTCC 57.533 39.130 0.00 0.00 0.00 4.30
3919 4000 4.739793 TCAATTTTGTGTCCATTCCTCCT 58.260 39.130 0.00 0.00 0.00 3.69
3920 4001 5.886609 TCAATTTTGTGTCCATTCCTCCTA 58.113 37.500 0.00 0.00 0.00 2.94
3966 4055 6.197276 GCTTGTGCAACTCAATATGACTATG 58.803 40.000 0.00 0.00 38.04 2.23
4008 4097 7.495934 GGAGCTCAAAGTTGCTAATCACTATTA 59.504 37.037 17.19 0.00 39.91 0.98
4127 4216 3.499563 CCAGGGGATAAATAATTGGGCGA 60.500 47.826 0.00 0.00 0.00 5.54
4176 4265 8.667592 AGGAACCTGTACTTTTTATCTAGTCT 57.332 34.615 0.00 0.00 0.00 3.24
4195 4284 6.187727 AGTCTTATGAGGGTTTTGTCTTGA 57.812 37.500 0.00 0.00 0.00 3.02
4196 4285 6.601332 AGTCTTATGAGGGTTTTGTCTTGAA 58.399 36.000 0.00 0.00 0.00 2.69
4701 4792 9.533831 AAAATTGTGAAAATACATACTCCCTCT 57.466 29.630 0.00 0.00 0.00 3.69
4702 4793 8.511604 AATTGTGAAAATACATACTCCCTCTG 57.488 34.615 0.00 0.00 0.00 3.35
4703 4794 6.620877 TGTGAAAATACATACTCCCTCTGT 57.379 37.500 0.00 0.00 0.00 3.41
4704 4795 7.727578 TGTGAAAATACATACTCCCTCTGTA 57.272 36.000 0.00 0.00 0.00 2.74
4705 4796 8.141298 TGTGAAAATACATACTCCCTCTGTAA 57.859 34.615 0.00 0.00 0.00 2.41
4706 4797 8.598916 TGTGAAAATACATACTCCCTCTGTAAA 58.401 33.333 0.00 0.00 0.00 2.01
4707 4798 8.880750 GTGAAAATACATACTCCCTCTGTAAAC 58.119 37.037 0.00 0.00 0.00 2.01
4708 4799 8.822805 TGAAAATACATACTCCCTCTGTAAACT 58.177 33.333 0.00 0.00 0.00 2.66
4719 4810 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
4720 4811 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
4721 4812 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
4722 4813 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
4723 4814 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
4740 4831 9.570488 AAGAGCGTTTAGATTACTAAAGTAGTG 57.430 33.333 0.00 0.00 45.42 2.74
4741 4832 8.954350 AGAGCGTTTAGATTACTAAAGTAGTGA 58.046 33.333 0.00 0.00 45.42 3.41
4742 4833 9.733219 GAGCGTTTAGATTACTAAAGTAGTGAT 57.267 33.333 0.00 0.00 45.42 3.06
4743 4834 9.733219 AGCGTTTAGATTACTAAAGTAGTGATC 57.267 33.333 10.62 10.62 46.38 2.92
4751 4842 9.733219 GATTACTAAAGTAGTGATCTAAACGCT 57.267 33.333 11.11 0.00 44.10 5.07
4752 4843 9.733219 ATTACTAAAGTAGTGATCTAAACGCTC 57.267 33.333 0.00 0.00 39.81 5.03
4753 4844 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
4754 4845 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
4755 4846 8.954350 ACTAAAGTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 37.69 2.10
4756 4847 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
4768 4859 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
4769 4860 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
4770 4861 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
4771 4862 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
4772 4863 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
4773 4864 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
4774 4865 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
4775 4866 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
4859 4950 5.414765 GGTAGTAACTTCCAGGGTTGATTTG 59.585 44.000 0.00 0.00 0.00 2.32
4860 4951 5.061721 AGTAACTTCCAGGGTTGATTTGT 57.938 39.130 0.00 0.00 0.00 2.83
4887 5030 7.800155 TTCATCATCACTAGTGTCAAAAACA 57.200 32.000 21.99 0.81 34.78 2.83
4905 5048 9.104965 TCAAAAACACTCTTATATTATGGGACG 57.895 33.333 0.00 0.00 0.00 4.79
4930 5076 7.228706 CGGAGGGAGTATGTTTTATGCTTAATT 59.771 37.037 0.00 0.00 0.00 1.40
4969 5115 7.046652 GGAAATAGAACTAGTTTACAGGGTCC 58.953 42.308 10.02 7.58 0.00 4.46
5195 5626 3.053170 AGGAAGTTAAACAACCACCACCT 60.053 43.478 0.00 0.00 0.00 4.00
5287 5718 7.643764 ACATGTATTCTTTCGTTCAAAAGTGTG 59.356 33.333 0.00 0.00 37.49 3.82
5384 5816 7.363181 CCATGGAATAAGCTCATTTGAGTTTCA 60.363 37.037 5.56 6.00 43.11 2.69
5512 5946 2.851195 AGAAATCAAACAGTGCCTCGT 58.149 42.857 0.00 0.00 0.00 4.18
5610 6044 4.965814 ACCATAGTTGTCATATCTGCTGG 58.034 43.478 0.00 0.00 0.00 4.85
5620 6054 5.585844 TGTCATATCTGCTGGTTTACATGTG 59.414 40.000 9.11 0.00 0.00 3.21
5678 6113 8.855110 TGAAATTTCAAACTTGCAACTAGGATA 58.145 29.630 18.45 0.00 33.55 2.59
5682 6117 9.643693 ATTTCAAACTTGCAACTAGGATATTTG 57.356 29.630 0.00 0.00 34.70 2.32
5684 6119 8.177119 TCAAACTTGCAACTAGGATATTTGTT 57.823 30.769 0.00 0.00 34.16 2.83
5870 6373 9.601217 AAAGTAGTATTAGATGCAACTTACTGG 57.399 33.333 15.09 0.00 0.00 4.00
6138 7672 1.464734 TGCGTTTTCTGTGAAACCCA 58.535 45.000 0.00 0.00 36.42 4.51
6176 7710 4.057432 CGCCAACTTCAATTGTGGATTTT 58.943 39.130 15.15 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.273606 CCATCTCCACTATGGTAGGCG 59.726 57.143 0.00 0.00 39.30 5.52
1 2 1.002544 GCCATCTCCACTATGGTAGGC 59.997 57.143 4.18 0.00 44.87 3.93
2 3 2.329267 TGCCATCTCCACTATGGTAGG 58.671 52.381 4.18 0.00 44.87 3.18
3 4 3.389329 AGTTGCCATCTCCACTATGGTAG 59.611 47.826 4.18 0.00 44.87 3.18
4 5 3.384168 AGTTGCCATCTCCACTATGGTA 58.616 45.455 4.18 0.00 44.87 3.25
5 6 2.200081 AGTTGCCATCTCCACTATGGT 58.800 47.619 4.18 0.00 44.87 3.55
6 7 3.209410 GAAGTTGCCATCTCCACTATGG 58.791 50.000 0.00 0.00 45.68 2.74
7 8 2.868583 CGAAGTTGCCATCTCCACTATG 59.131 50.000 0.00 0.00 0.00 2.23
8 9 2.158900 CCGAAGTTGCCATCTCCACTAT 60.159 50.000 0.00 0.00 0.00 2.12
9 10 1.207089 CCGAAGTTGCCATCTCCACTA 59.793 52.381 0.00 0.00 0.00 2.74
10 11 0.036010 CCGAAGTTGCCATCTCCACT 60.036 55.000 0.00 0.00 0.00 4.00
11 12 1.026718 CCCGAAGTTGCCATCTCCAC 61.027 60.000 0.00 0.00 0.00 4.02
12 13 1.198094 TCCCGAAGTTGCCATCTCCA 61.198 55.000 0.00 0.00 0.00 3.86
13 14 0.744771 GTCCCGAAGTTGCCATCTCC 60.745 60.000 0.00 0.00 0.00 3.71
14 15 0.744771 GGTCCCGAAGTTGCCATCTC 60.745 60.000 0.00 0.00 0.00 2.75
15 16 1.299976 GGTCCCGAAGTTGCCATCT 59.700 57.895 0.00 0.00 0.00 2.90
16 17 1.002624 TGGTCCCGAAGTTGCCATC 60.003 57.895 0.00 0.00 0.00 3.51
17 18 1.002134 CTGGTCCCGAAGTTGCCAT 60.002 57.895 0.00 0.00 0.00 4.40
18 19 2.429930 CTGGTCCCGAAGTTGCCA 59.570 61.111 0.00 0.00 0.00 4.92
19 20 2.359975 CCTGGTCCCGAAGTTGCC 60.360 66.667 0.00 0.00 0.00 4.52
20 21 2.198304 ATCCCTGGTCCCGAAGTTGC 62.198 60.000 0.00 0.00 0.00 4.17
21 22 0.107654 GATCCCTGGTCCCGAAGTTG 60.108 60.000 0.00 0.00 0.00 3.16
22 23 1.272554 GGATCCCTGGTCCCGAAGTT 61.273 60.000 0.00 0.00 0.00 2.66
23 24 1.689582 GGATCCCTGGTCCCGAAGT 60.690 63.158 0.00 0.00 0.00 3.01
24 25 2.797278 CGGATCCCTGGTCCCGAAG 61.797 68.421 6.06 0.00 44.29 3.79
25 26 2.762459 CGGATCCCTGGTCCCGAA 60.762 66.667 6.06 0.00 44.29 4.30
27 28 3.227276 CTCGGATCCCTGGTCCCG 61.227 72.222 6.06 11.01 43.02 5.14
28 29 2.844839 CCTCGGATCCCTGGTCCC 60.845 72.222 6.06 0.00 31.87 4.46
29 30 1.382695 TTCCTCGGATCCCTGGTCC 60.383 63.158 6.06 0.00 0.00 4.46
30 31 1.823976 GTTCCTCGGATCCCTGGTC 59.176 63.158 6.06 3.56 0.00 4.02
31 32 2.058595 CGTTCCTCGGATCCCTGGT 61.059 63.158 6.06 0.00 35.71 4.00
32 33 2.815308 CGTTCCTCGGATCCCTGG 59.185 66.667 6.06 8.77 35.71 4.45
41 42 2.264794 CCTCCAACCCGTTCCTCG 59.735 66.667 0.00 0.00 39.52 4.63
42 43 2.046217 GCCTCCAACCCGTTCCTC 60.046 66.667 0.00 0.00 0.00 3.71
43 44 2.198304 GATGCCTCCAACCCGTTCCT 62.198 60.000 0.00 0.00 0.00 3.36
44 45 1.749258 GATGCCTCCAACCCGTTCC 60.749 63.158 0.00 0.00 0.00 3.62
45 46 0.394352 ATGATGCCTCCAACCCGTTC 60.394 55.000 0.00 0.00 0.00 3.95
46 47 0.680921 CATGATGCCTCCAACCCGTT 60.681 55.000 0.00 0.00 0.00 4.44
47 48 1.077501 CATGATGCCTCCAACCCGT 60.078 57.895 0.00 0.00 0.00 5.28
48 49 0.680921 AACATGATGCCTCCAACCCG 60.681 55.000 0.00 0.00 0.00 5.28
49 50 0.819582 CAACATGATGCCTCCAACCC 59.180 55.000 0.00 0.00 0.00 4.11
50 51 1.747355 CTCAACATGATGCCTCCAACC 59.253 52.381 0.00 0.00 0.00 3.77
51 52 1.747355 CCTCAACATGATGCCTCCAAC 59.253 52.381 0.00 0.00 0.00 3.77
52 53 1.956636 GCCTCAACATGATGCCTCCAA 60.957 52.381 0.00 0.00 32.86 3.53
53 54 0.394762 GCCTCAACATGATGCCTCCA 60.395 55.000 0.00 0.00 32.86 3.86
54 55 0.394762 TGCCTCAACATGATGCCTCC 60.395 55.000 0.00 0.00 37.24 4.30
55 56 0.737219 GTGCCTCAACATGATGCCTC 59.263 55.000 0.00 0.00 37.24 4.70
56 57 0.682209 GGTGCCTCAACATGATGCCT 60.682 55.000 0.00 0.00 37.24 4.75
57 58 0.966875 TGGTGCCTCAACATGATGCC 60.967 55.000 0.00 0.00 37.24 4.40
58 59 1.108776 ATGGTGCCTCAACATGATGC 58.891 50.000 0.00 1.33 40.58 3.91
59 60 3.281158 TGTATGGTGCCTCAACATGATG 58.719 45.455 7.54 0.00 42.22 3.07
60 61 3.650281 TGTATGGTGCCTCAACATGAT 57.350 42.857 7.54 0.00 42.22 2.45
61 62 3.544684 GATGTATGGTGCCTCAACATGA 58.455 45.455 7.54 0.00 42.22 3.07
62 63 2.620115 GGATGTATGGTGCCTCAACATG 59.380 50.000 7.54 0.00 42.22 3.21
63 64 2.511218 AGGATGTATGGTGCCTCAACAT 59.489 45.455 2.73 2.73 44.56 2.71
64 65 1.915489 AGGATGTATGGTGCCTCAACA 59.085 47.619 0.00 0.00 34.75 3.33
65 66 2.565841 GAGGATGTATGGTGCCTCAAC 58.434 52.381 0.00 0.00 44.91 3.18
66 67 1.138859 CGAGGATGTATGGTGCCTCAA 59.861 52.381 0.00 0.00 45.65 3.02
67 68 0.752658 CGAGGATGTATGGTGCCTCA 59.247 55.000 0.00 0.00 45.65 3.86
68 69 0.601311 GCGAGGATGTATGGTGCCTC 60.601 60.000 0.00 0.00 42.71 4.70
69 70 1.447643 GCGAGGATGTATGGTGCCT 59.552 57.895 0.00 0.00 0.00 4.75
70 71 1.598130 GGCGAGGATGTATGGTGCC 60.598 63.158 0.00 0.00 0.00 5.01
71 72 1.146041 TGGCGAGGATGTATGGTGC 59.854 57.895 0.00 0.00 0.00 5.01
72 73 0.532862 GGTGGCGAGGATGTATGGTG 60.533 60.000 0.00 0.00 0.00 4.17
73 74 0.980754 TGGTGGCGAGGATGTATGGT 60.981 55.000 0.00 0.00 0.00 3.55
74 75 0.532862 GTGGTGGCGAGGATGTATGG 60.533 60.000 0.00 0.00 0.00 2.74
75 76 0.177836 TGTGGTGGCGAGGATGTATG 59.822 55.000 0.00 0.00 0.00 2.39
76 77 0.908910 TTGTGGTGGCGAGGATGTAT 59.091 50.000 0.00 0.00 0.00 2.29
77 78 0.908910 ATTGTGGTGGCGAGGATGTA 59.091 50.000 0.00 0.00 0.00 2.29
78 79 0.392998 GATTGTGGTGGCGAGGATGT 60.393 55.000 0.00 0.00 0.00 3.06
79 80 1.097547 GGATTGTGGTGGCGAGGATG 61.098 60.000 0.00 0.00 0.00 3.51
80 81 1.224592 GGATTGTGGTGGCGAGGAT 59.775 57.895 0.00 0.00 0.00 3.24
81 82 2.668632 GGATTGTGGTGGCGAGGA 59.331 61.111 0.00 0.00 0.00 3.71
82 83 2.819595 CGGATTGTGGTGGCGAGG 60.820 66.667 0.00 0.00 0.00 4.63
83 84 3.499737 GCGGATTGTGGTGGCGAG 61.500 66.667 0.00 0.00 0.00 5.03
88 89 3.803082 CAGCGGCGGATTGTGGTG 61.803 66.667 9.78 0.00 0.00 4.17
100 101 1.601759 CCAGGATAATGCCCAGCGG 60.602 63.158 0.00 0.00 0.00 5.52
101 102 2.263741 GCCAGGATAATGCCCAGCG 61.264 63.158 0.00 0.00 0.00 5.18
102 103 1.152368 AGCCAGGATAATGCCCAGC 59.848 57.895 0.00 0.00 0.00 4.85
103 104 1.177256 GCAGCCAGGATAATGCCCAG 61.177 60.000 0.00 0.00 32.49 4.45
104 105 1.152694 GCAGCCAGGATAATGCCCA 60.153 57.895 0.00 0.00 32.49 5.36
105 106 3.769201 GCAGCCAGGATAATGCCC 58.231 61.111 0.00 0.00 32.49 5.36
107 108 0.892814 GGAGGCAGCCAGGATAATGC 60.893 60.000 15.80 0.00 37.95 3.56
108 109 0.604780 CGGAGGCAGCCAGGATAATG 60.605 60.000 15.80 0.00 0.00 1.90
109 110 0.764369 TCGGAGGCAGCCAGGATAAT 60.764 55.000 15.80 0.00 0.00 1.28
110 111 1.382557 TCGGAGGCAGCCAGGATAA 60.383 57.895 15.80 0.00 0.00 1.75
111 112 2.134287 GTCGGAGGCAGCCAGGATA 61.134 63.158 15.80 0.00 0.00 2.59
112 113 3.474570 GTCGGAGGCAGCCAGGAT 61.475 66.667 15.80 0.00 0.00 3.24
115 116 4.803426 GTCGTCGGAGGCAGCCAG 62.803 72.222 15.80 4.59 0.00 4.85
119 120 4.813526 CGTCGTCGTCGGAGGCAG 62.814 72.222 3.90 0.00 37.69 4.85
121 122 4.808238 GTCGTCGTCGTCGGAGGC 62.808 72.222 11.74 0.00 38.33 4.70
122 123 4.495939 CGTCGTCGTCGTCGGAGG 62.496 72.222 12.82 1.08 42.57 4.30
123 124 3.403249 CTCGTCGTCGTCGTCGGAG 62.403 68.421 18.80 11.82 45.17 4.63
124 125 3.473166 CTCGTCGTCGTCGTCGGA 61.473 66.667 18.80 6.97 45.17 4.55
125 126 4.495939 CCTCGTCGTCGTCGTCGG 62.496 72.222 18.80 9.47 45.17 4.79
126 127 2.860421 CTTCCTCGTCGTCGTCGTCG 62.860 65.000 14.18 14.18 46.06 5.12
127 128 1.225691 CTTCCTCGTCGTCGTCGTC 60.226 63.158 11.41 0.00 38.33 4.20
128 129 2.675056 CCTTCCTCGTCGTCGTCGT 61.675 63.158 11.41 0.00 38.33 4.34
129 130 2.097918 CCTTCCTCGTCGTCGTCG 59.902 66.667 5.50 5.50 38.33 5.12
130 131 1.979831 CTCCCTTCCTCGTCGTCGTC 61.980 65.000 1.33 0.00 38.33 4.20
131 132 2.033141 TCCCTTCCTCGTCGTCGT 59.967 61.111 1.33 0.00 38.33 4.34
132 133 0.742281 TACTCCCTTCCTCGTCGTCG 60.742 60.000 0.00 0.00 38.55 5.12
133 134 1.015868 CTACTCCCTTCCTCGTCGTC 58.984 60.000 0.00 0.00 0.00 4.20
134 135 0.327591 ACTACTCCCTTCCTCGTCGT 59.672 55.000 0.00 0.00 0.00 4.34
135 136 0.733729 CACTACTCCCTTCCTCGTCG 59.266 60.000 0.00 0.00 0.00 5.12
136 137 1.104630 CCACTACTCCCTTCCTCGTC 58.895 60.000 0.00 0.00 0.00 4.20
137 138 0.702902 TCCACTACTCCCTTCCTCGT 59.297 55.000 0.00 0.00 0.00 4.18
138 139 1.394618 CTCCACTACTCCCTTCCTCG 58.605 60.000 0.00 0.00 0.00 4.63
139 140 1.783071 CCTCCACTACTCCCTTCCTC 58.217 60.000 0.00 0.00 0.00 3.71
140 141 0.325765 GCCTCCACTACTCCCTTCCT 60.326 60.000 0.00 0.00 0.00 3.36
141 142 0.617820 TGCCTCCACTACTCCCTTCC 60.618 60.000 0.00 0.00 0.00 3.46
142 143 1.276622 TTGCCTCCACTACTCCCTTC 58.723 55.000 0.00 0.00 0.00 3.46
143 144 1.630878 CTTTGCCTCCACTACTCCCTT 59.369 52.381 0.00 0.00 0.00 3.95
144 145 1.280457 CTTTGCCTCCACTACTCCCT 58.720 55.000 0.00 0.00 0.00 4.20
145 146 0.253327 CCTTTGCCTCCACTACTCCC 59.747 60.000 0.00 0.00 0.00 4.30
146 147 0.393132 GCCTTTGCCTCCACTACTCC 60.393 60.000 0.00 0.00 0.00 3.85
147 148 0.615850 AGCCTTTGCCTCCACTACTC 59.384 55.000 0.00 0.00 38.69 2.59
148 149 0.326264 CAGCCTTTGCCTCCACTACT 59.674 55.000 0.00 0.00 38.69 2.57
149 150 0.036875 ACAGCCTTTGCCTCCACTAC 59.963 55.000 0.00 0.00 38.69 2.73
150 151 0.036732 CACAGCCTTTGCCTCCACTA 59.963 55.000 0.00 0.00 38.69 2.74
151 152 1.228367 CACAGCCTTTGCCTCCACT 60.228 57.895 0.00 0.00 38.69 4.00
152 153 1.228245 TCACAGCCTTTGCCTCCAC 60.228 57.895 0.00 0.00 38.69 4.02
153 154 1.073722 CTCACAGCCTTTGCCTCCA 59.926 57.895 0.00 0.00 38.69 3.86
154 155 2.338785 GCTCACAGCCTTTGCCTCC 61.339 63.158 0.00 0.00 38.69 4.30
155 156 1.584380 CTGCTCACAGCCTTTGCCTC 61.584 60.000 0.00 0.00 41.51 4.70
156 157 1.602888 CTGCTCACAGCCTTTGCCT 60.603 57.895 0.00 0.00 41.51 4.75
157 158 2.960170 CTGCTCACAGCCTTTGCC 59.040 61.111 0.00 0.00 41.51 4.52
185 186 1.196766 ACTTAACCACTCCGGGGTCC 61.197 60.000 2.28 0.00 37.77 4.46
186 187 0.036671 CACTTAACCACTCCGGGGTC 60.037 60.000 2.28 0.00 37.77 4.46
187 188 0.765519 ACACTTAACCACTCCGGGGT 60.766 55.000 0.00 0.00 41.41 4.95
188 189 0.399075 AACACTTAACCACTCCGGGG 59.601 55.000 0.00 0.00 40.22 5.73
189 190 1.877443 CAAACACTTAACCACTCCGGG 59.123 52.381 0.00 0.00 40.22 5.73
190 191 2.567985 ACAAACACTTAACCACTCCGG 58.432 47.619 0.00 0.00 42.50 5.14
191 192 4.024641 GGTTACAAACACTTAACCACTCCG 60.025 45.833 5.78 0.00 44.63 4.63
192 193 5.428496 GGTTACAAACACTTAACCACTCC 57.572 43.478 5.78 0.00 44.63 3.85
197 198 4.585581 ACCCATGGTTACAAACACTTAACC 59.414 41.667 11.73 3.94 45.23 2.85
198 199 5.508320 CCACCCATGGTTACAAACACTTAAC 60.508 44.000 11.73 0.00 41.64 2.01
199 200 4.585162 CCACCCATGGTTACAAACACTTAA 59.415 41.667 11.73 0.00 41.64 1.85
200 201 4.145807 CCACCCATGGTTACAAACACTTA 58.854 43.478 11.73 0.00 41.64 2.24
201 202 2.962421 CCACCCATGGTTACAAACACTT 59.038 45.455 11.73 0.00 41.64 3.16
202 203 2.593026 CCACCCATGGTTACAAACACT 58.407 47.619 11.73 0.00 41.64 3.55
203 204 1.616374 CCCACCCATGGTTACAAACAC 59.384 52.381 11.73 0.00 45.66 3.32
204 205 2.002505 CCCACCCATGGTTACAAACA 57.997 50.000 11.73 0.00 45.66 2.83
205 206 0.606096 GCCCACCCATGGTTACAAAC 59.394 55.000 11.73 0.00 45.66 2.93
206 207 0.485099 AGCCCACCCATGGTTACAAA 59.515 50.000 11.73 0.00 45.66 2.83
207 208 0.251564 CAGCCCACCCATGGTTACAA 60.252 55.000 11.73 0.00 45.66 2.41
208 209 1.136961 TCAGCCCACCCATGGTTACA 61.137 55.000 11.73 0.00 45.66 2.41
209 210 0.258774 ATCAGCCCACCCATGGTTAC 59.741 55.000 11.73 0.00 45.66 2.50
210 211 1.006813 AATCAGCCCACCCATGGTTA 58.993 50.000 11.73 0.00 45.66 2.85
211 212 0.116940 AAATCAGCCCACCCATGGTT 59.883 50.000 11.73 0.00 45.66 3.67
212 213 0.116940 AAAATCAGCCCACCCATGGT 59.883 50.000 11.73 0.00 45.66 3.55
213 214 1.065998 CAAAAATCAGCCCACCCATGG 60.066 52.381 4.14 4.14 46.81 3.66
214 215 1.901159 TCAAAAATCAGCCCACCCATG 59.099 47.619 0.00 0.00 0.00 3.66
215 216 2.323999 TCAAAAATCAGCCCACCCAT 57.676 45.000 0.00 0.00 0.00 4.00
216 217 2.323999 ATCAAAAATCAGCCCACCCA 57.676 45.000 0.00 0.00 0.00 4.51
217 218 2.430694 GGTATCAAAAATCAGCCCACCC 59.569 50.000 0.00 0.00 0.00 4.61
218 219 3.365472 AGGTATCAAAAATCAGCCCACC 58.635 45.455 0.00 0.00 0.00 4.61
219 220 4.142160 GGAAGGTATCAAAAATCAGCCCAC 60.142 45.833 0.00 0.00 0.00 4.61
220 221 4.023291 GGAAGGTATCAAAAATCAGCCCA 58.977 43.478 0.00 0.00 0.00 5.36
221 222 3.066760 CGGAAGGTATCAAAAATCAGCCC 59.933 47.826 0.00 0.00 0.00 5.19
222 223 3.945285 TCGGAAGGTATCAAAAATCAGCC 59.055 43.478 0.00 0.00 0.00 4.85
223 224 5.757850 ATCGGAAGGTATCAAAAATCAGC 57.242 39.130 0.00 0.00 0.00 4.26
228 229 9.854668 TGGATAAATATCGGAAGGTATCAAAAA 57.145 29.630 0.00 0.00 36.09 1.94
229 230 9.854668 TTGGATAAATATCGGAAGGTATCAAAA 57.145 29.630 0.00 0.00 36.09 2.44
230 231 9.502091 CTTGGATAAATATCGGAAGGTATCAAA 57.498 33.333 0.00 0.00 36.09 2.69
231 232 8.656806 ACTTGGATAAATATCGGAAGGTATCAA 58.343 33.333 12.08 0.00 36.09 2.57
232 233 8.202461 ACTTGGATAAATATCGGAAGGTATCA 57.798 34.615 12.08 0.00 36.09 2.15
246 247 9.546428 GCAAGCCAATTTATAACTTGGATAAAT 57.454 29.630 29.25 12.39 43.83 1.40
247 248 8.535335 TGCAAGCCAATTTATAACTTGGATAAA 58.465 29.630 29.25 14.74 43.83 1.40
248 249 7.978975 GTGCAAGCCAATTTATAACTTGGATAA 59.021 33.333 29.25 15.01 43.83 1.75
249 250 7.123397 TGTGCAAGCCAATTTATAACTTGGATA 59.877 33.333 29.25 15.54 43.83 2.59
250 251 6.070881 TGTGCAAGCCAATTTATAACTTGGAT 60.071 34.615 29.25 23.53 43.83 3.41
251 252 5.244851 TGTGCAAGCCAATTTATAACTTGGA 59.755 36.000 29.25 17.02 43.83 3.53
252 253 5.477510 TGTGCAAGCCAATTTATAACTTGG 58.522 37.500 23.63 23.63 43.93 3.61
253 254 7.599630 AATGTGCAAGCCAATTTATAACTTG 57.400 32.000 8.25 8.25 40.49 3.16
254 255 9.533253 GATAATGTGCAAGCCAATTTATAACTT 57.467 29.630 0.00 0.00 0.00 2.66
255 256 7.862372 CGATAATGTGCAAGCCAATTTATAACT 59.138 33.333 0.00 0.00 0.00 2.24
256 257 7.860373 TCGATAATGTGCAAGCCAATTTATAAC 59.140 33.333 0.00 0.00 0.00 1.89
257 258 7.860373 GTCGATAATGTGCAAGCCAATTTATAA 59.140 33.333 0.00 0.00 0.00 0.98
258 259 7.228507 AGTCGATAATGTGCAAGCCAATTTATA 59.771 33.333 0.00 0.00 0.00 0.98
259 260 6.039717 AGTCGATAATGTGCAAGCCAATTTAT 59.960 34.615 0.00 0.00 0.00 1.40
260 261 5.356751 AGTCGATAATGTGCAAGCCAATTTA 59.643 36.000 0.00 0.00 0.00 1.40
261 262 4.158394 AGTCGATAATGTGCAAGCCAATTT 59.842 37.500 0.00 0.00 0.00 1.82
262 263 3.696051 AGTCGATAATGTGCAAGCCAATT 59.304 39.130 0.00 0.00 0.00 2.32
263 264 3.065786 CAGTCGATAATGTGCAAGCCAAT 59.934 43.478 0.00 0.00 0.00 3.16
264 265 2.419673 CAGTCGATAATGTGCAAGCCAA 59.580 45.455 0.00 0.00 0.00 4.52
265 266 2.009051 CAGTCGATAATGTGCAAGCCA 58.991 47.619 0.00 0.00 0.00 4.75
266 267 2.009774 ACAGTCGATAATGTGCAAGCC 58.990 47.619 0.00 0.00 0.00 4.35
267 268 3.747099 AACAGTCGATAATGTGCAAGC 57.253 42.857 0.00 0.00 0.00 4.01
268 269 6.408858 AACTAACAGTCGATAATGTGCAAG 57.591 37.500 0.00 0.00 0.00 4.01
269 270 6.203915 ACAAACTAACAGTCGATAATGTGCAA 59.796 34.615 0.00 0.00 0.00 4.08
270 271 5.699001 ACAAACTAACAGTCGATAATGTGCA 59.301 36.000 0.00 0.00 0.00 4.57
271 272 6.165659 ACAAACTAACAGTCGATAATGTGC 57.834 37.500 0.00 0.00 0.00 4.57
274 275 9.916397 GGATAAACAAACTAACAGTCGATAATG 57.084 33.333 0.00 0.00 0.00 1.90
275 276 9.661563 TGGATAAACAAACTAACAGTCGATAAT 57.338 29.630 0.00 0.00 0.00 1.28
276 277 8.928733 GTGGATAAACAAACTAACAGTCGATAA 58.071 33.333 0.00 0.00 0.00 1.75
277 278 8.308931 AGTGGATAAACAAACTAACAGTCGATA 58.691 33.333 0.00 0.00 0.00 2.92
278 279 7.117812 CAGTGGATAAACAAACTAACAGTCGAT 59.882 37.037 0.00 0.00 0.00 3.59
279 280 6.422701 CAGTGGATAAACAAACTAACAGTCGA 59.577 38.462 0.00 0.00 0.00 4.20
280 281 6.590357 CAGTGGATAAACAAACTAACAGTCG 58.410 40.000 0.00 0.00 0.00 4.18
281 282 6.371389 GCAGTGGATAAACAAACTAACAGTC 58.629 40.000 0.00 0.00 0.00 3.51
282 283 5.240844 GGCAGTGGATAAACAAACTAACAGT 59.759 40.000 0.00 0.00 0.00 3.55
283 284 5.473504 AGGCAGTGGATAAACAAACTAACAG 59.526 40.000 0.00 0.00 0.00 3.16
284 285 5.381757 AGGCAGTGGATAAACAAACTAACA 58.618 37.500 0.00 0.00 0.00 2.41
285 286 5.959618 AGGCAGTGGATAAACAAACTAAC 57.040 39.130 0.00 0.00 0.00 2.34
286 287 6.303839 AGAAGGCAGTGGATAAACAAACTAA 58.696 36.000 0.00 0.00 0.00 2.24
287 288 5.876357 AGAAGGCAGTGGATAAACAAACTA 58.124 37.500 0.00 0.00 0.00 2.24
288 289 4.729868 AGAAGGCAGTGGATAAACAAACT 58.270 39.130 0.00 0.00 0.00 2.66
289 290 5.453567 AAGAAGGCAGTGGATAAACAAAC 57.546 39.130 0.00 0.00 0.00 2.93
290 291 6.323739 AGAAAAGAAGGCAGTGGATAAACAAA 59.676 34.615 0.00 0.00 0.00 2.83
291 292 5.833131 AGAAAAGAAGGCAGTGGATAAACAA 59.167 36.000 0.00 0.00 0.00 2.83
292 293 5.385198 AGAAAAGAAGGCAGTGGATAAACA 58.615 37.500 0.00 0.00 0.00 2.83
293 294 5.966742 AGAAAAGAAGGCAGTGGATAAAC 57.033 39.130 0.00 0.00 0.00 2.01
294 295 5.476945 GGAAGAAAAGAAGGCAGTGGATAAA 59.523 40.000 0.00 0.00 0.00 1.40
295 296 5.010282 GGAAGAAAAGAAGGCAGTGGATAA 58.990 41.667 0.00 0.00 0.00 1.75
296 297 4.042809 TGGAAGAAAAGAAGGCAGTGGATA 59.957 41.667 0.00 0.00 0.00 2.59
297 298 3.181429 TGGAAGAAAAGAAGGCAGTGGAT 60.181 43.478 0.00 0.00 0.00 3.41
298 299 2.174639 TGGAAGAAAAGAAGGCAGTGGA 59.825 45.455 0.00 0.00 0.00 4.02
299 300 2.586425 TGGAAGAAAAGAAGGCAGTGG 58.414 47.619 0.00 0.00 0.00 4.00
300 301 5.964958 TTATGGAAGAAAAGAAGGCAGTG 57.035 39.130 0.00 0.00 0.00 3.66
301 302 6.306987 TCTTTATGGAAGAAAAGAAGGCAGT 58.693 36.000 0.00 0.00 41.34 4.40
302 303 6.824305 TCTTTATGGAAGAAAAGAAGGCAG 57.176 37.500 0.00 0.00 41.34 4.85
313 314 6.137794 TGCGTTGTTTTTCTTTATGGAAGA 57.862 33.333 0.00 0.00 42.56 2.87
314 315 5.977129 ACTGCGTTGTTTTTCTTTATGGAAG 59.023 36.000 0.00 0.00 36.67 3.46
315 316 5.897050 ACTGCGTTGTTTTTCTTTATGGAA 58.103 33.333 0.00 0.00 0.00 3.53
316 317 5.066634 TGACTGCGTTGTTTTTCTTTATGGA 59.933 36.000 0.00 0.00 0.00 3.41
317 318 5.277825 TGACTGCGTTGTTTTTCTTTATGG 58.722 37.500 0.00 0.00 0.00 2.74
318 319 5.108254 GCTGACTGCGTTGTTTTTCTTTATG 60.108 40.000 0.00 0.00 0.00 1.90
319 320 4.976116 GCTGACTGCGTTGTTTTTCTTTAT 59.024 37.500 0.00 0.00 0.00 1.40
320 321 4.142578 TGCTGACTGCGTTGTTTTTCTTTA 60.143 37.500 0.00 0.00 46.63 1.85
321 322 3.179048 GCTGACTGCGTTGTTTTTCTTT 58.821 40.909 0.00 0.00 0.00 2.52
322 323 2.163412 TGCTGACTGCGTTGTTTTTCTT 59.837 40.909 0.00 0.00 46.63 2.52
323 324 1.742831 TGCTGACTGCGTTGTTTTTCT 59.257 42.857 0.00 0.00 46.63 2.52
324 325 1.846175 GTGCTGACTGCGTTGTTTTTC 59.154 47.619 0.00 0.00 46.63 2.29
325 326 1.201181 TGTGCTGACTGCGTTGTTTTT 59.799 42.857 0.00 0.00 46.63 1.94
326 327 0.808125 TGTGCTGACTGCGTTGTTTT 59.192 45.000 0.00 0.00 46.63 2.43
327 328 0.098728 GTGTGCTGACTGCGTTGTTT 59.901 50.000 0.00 0.00 46.63 2.83
328 329 1.721487 GTGTGCTGACTGCGTTGTT 59.279 52.632 0.00 0.00 46.63 2.83
329 330 2.525248 CGTGTGCTGACTGCGTTGT 61.525 57.895 0.00 0.00 46.63 3.32
330 331 2.246397 CGTGTGCTGACTGCGTTG 59.754 61.111 0.00 0.00 46.63 4.10
331 332 2.967076 CCGTGTGCTGACTGCGTT 60.967 61.111 0.00 0.00 46.63 4.84
332 333 4.969196 CCCGTGTGCTGACTGCGT 62.969 66.667 0.00 0.00 46.63 5.24
335 336 4.662961 TCGCCCGTGTGCTGACTG 62.663 66.667 0.00 0.00 0.00 3.51
336 337 4.363990 CTCGCCCGTGTGCTGACT 62.364 66.667 0.00 0.00 0.00 3.41
337 338 4.664677 ACTCGCCCGTGTGCTGAC 62.665 66.667 0.00 0.00 0.00 3.51
338 339 2.933878 AAAACTCGCCCGTGTGCTGA 62.934 55.000 0.00 0.00 0.00 4.26
339 340 2.443957 GAAAACTCGCCCGTGTGCTG 62.444 60.000 0.00 0.00 0.00 4.41
340 341 2.203153 AAAACTCGCCCGTGTGCT 60.203 55.556 0.00 0.00 0.00 4.40
341 342 2.054140 TTGAAAACTCGCCCGTGTGC 62.054 55.000 0.00 0.00 0.00 4.57
342 343 0.591170 ATTGAAAACTCGCCCGTGTG 59.409 50.000 0.00 0.00 0.00 3.82
343 344 2.172851 TATTGAAAACTCGCCCGTGT 57.827 45.000 0.00 0.00 0.00 4.49
344 345 3.757745 ATTATTGAAAACTCGCCCGTG 57.242 42.857 0.00 0.00 0.00 4.94
345 346 4.776795 AAATTATTGAAAACTCGCCCGT 57.223 36.364 0.00 0.00 0.00 5.28
346 347 4.733405 GCTAAATTATTGAAAACTCGCCCG 59.267 41.667 0.00 0.00 0.00 6.13
347 348 5.515270 GTGCTAAATTATTGAAAACTCGCCC 59.485 40.000 0.00 0.00 0.00 6.13
348 349 6.090129 TGTGCTAAATTATTGAAAACTCGCC 58.910 36.000 0.00 0.00 0.00 5.54
349 350 6.237306 GCTGTGCTAAATTATTGAAAACTCGC 60.237 38.462 0.00 0.00 0.00 5.03
350 351 6.022251 CGCTGTGCTAAATTATTGAAAACTCG 60.022 38.462 0.00 0.00 0.00 4.18
351 352 6.801862 ACGCTGTGCTAAATTATTGAAAACTC 59.198 34.615 0.00 0.00 0.00 3.01
352 353 6.677913 ACGCTGTGCTAAATTATTGAAAACT 58.322 32.000 0.00 0.00 0.00 2.66
353 354 6.927933 ACGCTGTGCTAAATTATTGAAAAC 57.072 33.333 0.00 0.00 0.00 2.43
361 362 2.924926 CCGTGTACGCTGTGCTAAATTA 59.075 45.455 4.67 0.00 38.18 1.40
421 422 2.292267 CTACGATGCAATTTGGAGGCT 58.708 47.619 0.00 0.00 0.00 4.58
472 473 4.731773 GCAACTTGGTTTGTGTCTCAGAAG 60.732 45.833 0.00 0.00 0.00 2.85
486 487 2.092646 TGTGAGTAGTTGGCAACTTGGT 60.093 45.455 35.13 20.78 42.81 3.67
503 504 3.489813 CGAGGACGTTGTGATGTGA 57.510 52.632 0.00 0.00 34.56 3.58
514 515 4.759564 CTGGTCGTAACGAGGACG 57.240 61.111 0.00 0.00 40.65 4.79
537 538 0.889186 GGCCGACTTGCTTCAAGGAA 60.889 55.000 10.80 0.00 44.81 3.36
563 569 0.978151 TCGGGTCGGAAGGAAATTCA 59.022 50.000 0.00 0.00 39.91 2.57
567 573 1.372307 GGTTCGGGTCGGAAGGAAA 59.628 57.895 0.00 0.00 0.00 3.13
607 613 2.047179 GTGGCCGACCTGAACTCC 60.047 66.667 0.00 0.00 36.63 3.85
737 744 2.572733 GCTTTTGCTTCCCCTCTCC 58.427 57.895 0.00 0.00 43.35 3.71
1044 1056 2.448453 GGAGAGACGAGAAGGAAGGAA 58.552 52.381 0.00 0.00 0.00 3.36
1045 1057 1.679336 CGGAGAGACGAGAAGGAAGGA 60.679 57.143 0.00 0.00 35.47 3.36
1046 1058 0.736053 CGGAGAGACGAGAAGGAAGG 59.264 60.000 0.00 0.00 35.47 3.46
1047 1059 1.455248 ACGGAGAGACGAGAAGGAAG 58.545 55.000 0.00 0.00 37.61 3.46
1148 1160 5.873179 ACCATATATAAATCGGCAAACGG 57.127 39.130 0.00 0.00 44.45 4.44
1235 1247 5.959583 AACCCCAAATTCCAAACTACAAA 57.040 34.783 0.00 0.00 0.00 2.83
1387 1399 2.352651 ACTCCGACAATGCATTCATTCG 59.647 45.455 20.30 20.30 40.74 3.34
1405 1417 8.706035 GCATATATGGAATCAAATTGCAAACTC 58.294 33.333 14.51 0.00 43.81 3.01
1830 1857 1.686355 TCAACGTCAATTGGCCTTGT 58.314 45.000 17.53 2.98 0.00 3.16
2298 2325 3.332919 CTCAACACAGAGATCACTTGGG 58.667 50.000 0.00 0.00 37.87 4.12
2490 2517 3.936902 TTTTTGGTCAAGTTCGAGTCG 57.063 42.857 6.09 6.09 0.00 4.18
2847 2874 1.879380 TCAGTTTCATCCACAAAGCGG 59.121 47.619 0.00 0.00 0.00 5.52
2850 2877 5.772825 TTCCTTCAGTTTCATCCACAAAG 57.227 39.130 0.00 0.00 0.00 2.77
2907 2934 6.710597 AGCATCTTCAAGAATGCATATGTT 57.289 33.333 18.32 0.00 42.06 2.71
3014 3041 0.906066 TAAGGCTAACCATGGTGCGA 59.094 50.000 20.60 6.17 39.06 5.10
3015 3042 1.134521 TCTAAGGCTAACCATGGTGCG 60.135 52.381 20.60 13.66 39.06 5.34
3360 3387 2.158475 TGGATTTGGACAGCTCTGGTTT 60.158 45.455 1.66 0.00 34.19 3.27
3560 3587 9.842775 ATAATCATAATGTCTGTATATGCAGGG 57.157 33.333 19.19 0.00 37.12 4.45
3720 3801 7.452813 AGGATCCTTCAAAATCCCTTATATTGC 59.547 37.037 9.02 0.00 42.10 3.56
3767 3848 6.101997 GGAAGAAAGGCATGAACCTAAAATG 58.898 40.000 0.00 0.00 39.93 2.32
3792 3873 1.086067 TGCGCTGCATCTAAGCTGAC 61.086 55.000 9.73 0.00 38.57 3.51
3808 3889 0.940126 GCCAACATATCTGGACTGCG 59.060 55.000 4.77 0.00 35.85 5.18
3861 3942 5.704888 TGGTTGGAAAATACGTTATGCAAG 58.295 37.500 0.00 0.00 0.00 4.01
3914 3995 7.235606 TGTTATTGATTGGGAGATACTAGGAGG 59.764 40.741 0.00 0.00 0.00 4.30
3917 3998 7.390027 CCTGTTATTGATTGGGAGATACTAGG 58.610 42.308 0.00 0.00 0.00 3.02
3918 3999 6.876257 GCCTGTTATTGATTGGGAGATACTAG 59.124 42.308 0.00 0.00 0.00 2.57
3919 4000 6.558775 AGCCTGTTATTGATTGGGAGATACTA 59.441 38.462 0.00 0.00 0.00 1.82
3920 4001 5.370880 AGCCTGTTATTGATTGGGAGATACT 59.629 40.000 0.00 0.00 0.00 2.12
3966 4055 1.373570 CTCCGAATCTGAGGCCAAAC 58.626 55.000 5.01 0.00 0.00 2.93
4053 4142 7.129425 ACCATTAGGCCCAGATTTAATTAACA 58.871 34.615 0.00 0.00 39.06 2.41
4054 4143 7.255836 GGACCATTAGGCCCAGATTTAATTAAC 60.256 40.741 0.00 0.00 37.40 2.01
4061 4150 2.217776 AGGACCATTAGGCCCAGATTT 58.782 47.619 0.00 0.00 40.54 2.17
4127 4216 5.437289 TCAATGCGTGAAAACTGATTCTT 57.563 34.783 0.00 0.00 31.51 2.52
4176 4265 7.723616 TCAGAATTCAAGACAAAACCCTCATAA 59.276 33.333 8.44 0.00 0.00 1.90
4178 4267 6.070656 TCAGAATTCAAGACAAAACCCTCAT 58.929 36.000 8.44 0.00 0.00 2.90
4188 4277 8.571461 AGCAGAATATTTCAGAATTCAAGACA 57.429 30.769 8.44 0.00 35.07 3.41
4499 4589 8.487970 CACAGTATAATAACCGAAACATAGCAG 58.512 37.037 0.00 0.00 0.00 4.24
4606 4696 7.501559 CCCATGTCTACATCATCTTTCTTGAAT 59.498 37.037 0.00 0.00 33.61 2.57
4694 4785 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
4695 4786 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
4696 4787 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
4697 4788 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
4714 4805 9.570488 CACTACTTTAGTAATCTAAACGCTCTT 57.430 33.333 0.00 0.00 40.05 2.85
4715 4806 8.954350 TCACTACTTTAGTAATCTAAACGCTCT 58.046 33.333 0.00 0.00 40.05 4.09
4716 4807 9.733219 ATCACTACTTTAGTAATCTAAACGCTC 57.267 33.333 0.00 0.00 40.05 5.03
4717 4808 9.733219 GATCACTACTTTAGTAATCTAAACGCT 57.267 33.333 0.00 0.00 40.05 5.07
4718 4809 9.733219 AGATCACTACTTTAGTAATCTAAACGC 57.267 33.333 0.00 0.00 40.05 4.84
4724 4815 9.733219 GCGTTTAGATCACTACTTTAGTAATCT 57.267 33.333 4.72 4.72 37.23 2.40
4725 4816 9.733219 AGCGTTTAGATCACTACTTTAGTAATC 57.267 33.333 0.00 0.00 37.23 1.75
4726 4817 9.733219 GAGCGTTTAGATCACTACTTTAGTAAT 57.267 33.333 0.00 0.00 37.23 1.89
4727 4818 8.954350 AGAGCGTTTAGATCACTACTTTAGTAA 58.046 33.333 0.00 0.00 37.82 2.24
4728 4819 8.503458 AGAGCGTTTAGATCACTACTTTAGTA 57.497 34.615 0.00 0.00 37.82 1.82
4729 4820 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
4730 4821 9.953697 ATAAGAGCGTTTAGATCACTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
4742 4833 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
4743 4834 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
4744 4835 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
4745 4836 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
4746 4837 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
4747 4838 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
4748 4839 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
4749 4840 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
4750 4841 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
4751 4842 9.866655 TTACTCCCTCCGTAAACTAATATAAGA 57.133 33.333 0.00 0.00 0.00 2.10
4755 4846 9.605275 GTTTTTACTCCCTCCGTAAACTAATAT 57.395 33.333 0.00 0.00 36.78 1.28
4756 4847 8.815912 AGTTTTTACTCCCTCCGTAAACTAATA 58.184 33.333 0.00 0.00 36.78 0.98
4757 4848 7.683578 AGTTTTTACTCCCTCCGTAAACTAAT 58.316 34.615 0.00 0.00 36.78 1.73
4758 4849 7.066307 AGTTTTTACTCCCTCCGTAAACTAA 57.934 36.000 0.00 0.00 36.78 2.24
4759 4850 6.670695 AGTTTTTACTCCCTCCGTAAACTA 57.329 37.500 0.00 0.00 36.78 2.24
4760 4851 5.557576 AGTTTTTACTCCCTCCGTAAACT 57.442 39.130 0.00 0.00 36.78 2.66
4761 4852 9.605275 AATATAGTTTTTACTCCCTCCGTAAAC 57.395 33.333 0.00 0.00 36.78 2.01
4762 4853 9.603921 CAATATAGTTTTTACTCCCTCCGTAAA 57.396 33.333 0.00 0.00 35.65 2.01
4763 4854 8.761689 ACAATATAGTTTTTACTCCCTCCGTAA 58.238 33.333 0.00 0.00 0.00 3.18
4764 4855 8.199449 CACAATATAGTTTTTACTCCCTCCGTA 58.801 37.037 0.00 0.00 0.00 4.02
4765 4856 7.046033 CACAATATAGTTTTTACTCCCTCCGT 58.954 38.462 0.00 0.00 0.00 4.69
4766 4857 7.270047 TCACAATATAGTTTTTACTCCCTCCG 58.730 38.462 0.00 0.00 0.00 4.63
4767 4858 9.457436 TTTCACAATATAGTTTTTACTCCCTCC 57.543 33.333 0.00 0.00 0.00 4.30
4811 4902 4.154015 TCTGGTTGAAAATACACGATGCAG 59.846 41.667 0.00 0.00 0.00 4.41
4812 4903 4.068599 TCTGGTTGAAAATACACGATGCA 58.931 39.130 0.00 0.00 0.00 3.96
4859 4950 9.515020 TTTTTGACACTAGTGATGATGAAAAAC 57.485 29.630 29.30 6.08 0.00 2.43
4860 4951 9.515020 GTTTTTGACACTAGTGATGATGAAAAA 57.485 29.630 29.30 19.80 0.00 1.94
4887 5030 5.024118 CCCTCCGTCCCATAATATAAGAGT 58.976 45.833 0.00 0.00 0.00 3.24
4905 5048 8.465273 AATTAAGCATAAAACATACTCCCTCC 57.535 34.615 0.00 0.00 0.00 4.30
4939 5085 9.315525 CCTGTAAACTAGTTCTATTTCCTTAGC 57.684 37.037 8.95 0.00 0.00 3.09
5165 5596 7.119407 GGTGGTTGTTTAACTTCCTTCTCTATC 59.881 40.741 0.00 0.00 36.99 2.08
5287 5718 3.104843 TGGTTAGCACAAAACAATGGC 57.895 42.857 0.00 0.00 0.00 4.40
5384 5816 4.451900 CGTTGGGTAAGAATCCATAGCTT 58.548 43.478 0.00 0.00 32.48 3.74
5512 5946 2.159382 GCAGCAAACTACCTAAAGGCA 58.841 47.619 0.00 0.00 39.32 4.75
5678 6113 7.277098 GCAACAGATATCAGAATTGCAACAAAT 59.723 33.333 19.79 0.00 41.56 2.32
5681 6116 5.183522 TGCAACAGATATCAGAATTGCAACA 59.816 36.000 22.79 9.13 46.75 3.33
5682 6117 5.643664 TGCAACAGATATCAGAATTGCAAC 58.356 37.500 22.79 0.00 46.75 4.17
6060 7482 4.893795 CGAATCCAAACTTTACATCGGAC 58.106 43.478 0.00 0.00 0.00 4.79
6138 7672 2.166829 TGGCGAAATTGCACCAGTTAT 58.833 42.857 0.00 0.00 36.28 1.89
6176 7710 5.446143 ACAAACAATTGAAGTTGGCGATA 57.554 34.783 13.59 0.00 38.94 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.