Multiple sequence alignment - TraesCS2B01G233400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G233400 chr2B 100.000 2947 0 0 1 2947 231971789 231974735 0.000000e+00 5443.0
1 TraesCS2B01G233400 chr2A 94.949 2277 75 23 56 2307 185124906 185127167 0.000000e+00 3531.0
2 TraesCS2B01G233400 chr2A 91.463 82 7 0 2693 2774 356068896 356068815 2.400000e-21 113.0
3 TraesCS2B01G233400 chr2D 95.758 1980 63 15 416 2383 165541748 165539778 0.000000e+00 3171.0
4 TraesCS2B01G233400 chr2D 87.664 381 24 15 1 376 165542194 165541832 3.510000e-114 422.0
5 TraesCS2B01G233400 chr2D 91.463 82 7 0 2693 2774 202764442 202764523 2.400000e-21 113.0
6 TraesCS2B01G233400 chr2D 83.810 105 15 2 2693 2796 580555184 580555081 6.720000e-17 99.0
7 TraesCS2B01G233400 chr1B 88.350 103 9 3 2694 2794 294395987 294396088 1.430000e-23 121.0
8 TraesCS2B01G233400 chr4A 92.500 80 6 0 2692 2771 415157709 415157788 6.670000e-22 115.0
9 TraesCS2B01G233400 chr4A 83.962 106 16 1 2691 2795 335963929 335963824 1.870000e-17 100.0
10 TraesCS2B01G233400 chr5A 89.286 84 9 0 2693 2776 146289876 146289793 4.020000e-19 106.0
11 TraesCS2B01G233400 chr4B 84.112 107 15 2 2692 2796 482556005 482555899 5.200000e-18 102.0
12 TraesCS2B01G233400 chr6B 84.259 108 12 3 2694 2796 126531362 126531255 1.870000e-17 100.0
13 TraesCS2B01G233400 chr3A 79.286 140 16 5 293 421 668212335 668212472 5.230000e-13 86.1
14 TraesCS2B01G233400 chr5B 100.000 29 0 0 180 208 621462464 621462492 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G233400 chr2B 231971789 231974735 2946 False 5443.0 5443 100.000 1 2947 1 chr2B.!!$F1 2946
1 TraesCS2B01G233400 chr2A 185124906 185127167 2261 False 3531.0 3531 94.949 56 2307 1 chr2A.!!$F1 2251
2 TraesCS2B01G233400 chr2D 165539778 165542194 2416 True 1796.5 3171 91.711 1 2383 2 chr2D.!!$R2 2382

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
540 593 0.948678 TGGCTTGAAACGTTACCAGC 59.051 50.0 14.21 14.21 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2520 2586 0.106868 CCAATTTCGGTACCCCCTCC 60.107 60.0 6.25 0.0 0.0 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.028868 ATCTTTGGCTGCTCTTCGCC 61.029 55.000 0.00 0.00 46.46 5.54
113 114 6.037786 TCTCCTTCTATGTGTTCGAATGTT 57.962 37.500 0.00 0.00 0.00 2.71
171 173 6.384015 AGAGGTATCTGGTGATGAATGTTACA 59.616 38.462 0.00 0.00 33.30 2.41
172 174 6.957631 AGGTATCTGGTGATGAATGTTACAA 58.042 36.000 0.00 0.00 34.32 2.41
173 175 7.050377 AGGTATCTGGTGATGAATGTTACAAG 58.950 38.462 0.00 0.00 34.32 3.16
174 176 7.047891 GGTATCTGGTGATGAATGTTACAAGA 58.952 38.462 0.00 0.00 34.32 3.02
175 177 7.716998 GGTATCTGGTGATGAATGTTACAAGAT 59.283 37.037 0.00 0.00 37.52 2.40
176 178 6.990341 TCTGGTGATGAATGTTACAAGATG 57.010 37.500 0.00 0.00 0.00 2.90
177 179 6.710278 TCTGGTGATGAATGTTACAAGATGA 58.290 36.000 0.00 0.00 0.00 2.92
178 180 6.820152 TCTGGTGATGAATGTTACAAGATGAG 59.180 38.462 0.00 0.00 0.00 2.90
179 181 6.710278 TGGTGATGAATGTTACAAGATGAGA 58.290 36.000 0.00 0.00 0.00 3.27
219 224 6.712998 TGGTGAAAAAGAAATCATTCCGACTA 59.287 34.615 0.00 0.00 36.12 2.59
239 244 7.221067 CCGACTAGTGTTGTTTATCTGAATCTC 59.779 40.741 0.00 0.00 0.00 2.75
309 316 1.865865 AATAGATACGGGTGCAAGCG 58.134 50.000 0.00 0.00 33.03 4.68
326 333 2.282745 GGCAGCCTGCTTTGTCCT 60.283 61.111 17.55 0.00 44.28 3.85
369 376 8.092687 AGCTCTAAAATTTGTTCATCATTTGCT 58.907 29.630 0.00 0.00 0.00 3.91
405 423 1.941668 GCTATTGTCCGCTAGCCCATC 60.942 57.143 9.66 0.00 35.40 3.51
409 427 4.853142 TCCGCTAGCCCATCCCGT 62.853 66.667 9.66 0.00 0.00 5.28
417 469 2.785425 GCCCATCCCGTTTGCATCC 61.785 63.158 0.00 0.00 0.00 3.51
465 517 6.425114 CGGATCATCAGAAGTACCCAAATAAG 59.575 42.308 0.00 0.00 0.00 1.73
527 580 4.142534 CCAAGTAGATGTGTGAATGGCTTG 60.143 45.833 0.00 0.00 0.00 4.01
532 585 2.772568 TGTGTGAATGGCTTGAAACG 57.227 45.000 0.00 0.00 0.00 3.60
533 586 2.020720 TGTGTGAATGGCTTGAAACGT 58.979 42.857 0.00 0.00 0.00 3.99
540 593 0.948678 TGGCTTGAAACGTTACCAGC 59.051 50.000 14.21 14.21 0.00 4.85
548 601 5.351233 TGAAACGTTACCAGCAGTATTTG 57.649 39.130 0.00 0.00 0.00 2.32
557 610 7.223971 CGTTACCAGCAGTATTTGAAGCTATAA 59.776 37.037 0.00 0.00 35.19 0.98
609 663 3.431207 CCCATGAAGGACCAAAATGCATC 60.431 47.826 0.00 0.00 41.22 3.91
633 687 5.027460 TCTACAGTTATTACAGGGCCAGAA 58.973 41.667 6.18 0.00 0.00 3.02
705 760 1.135859 CCACAAATCACAAGCGCTCTC 60.136 52.381 12.06 0.00 0.00 3.20
714 769 3.909086 AAGCGCTCTCAAGCCCCAC 62.909 63.158 12.06 0.00 46.34 4.61
802 857 4.215908 ACAGATAAGACTCGGATAAGGCA 58.784 43.478 0.00 0.00 0.00 4.75
892 947 9.333724 GAGATAACACCGGGAATTTCTTATAAA 57.666 33.333 6.32 0.00 0.00 1.40
931 986 3.582120 CGGCCACACACCACACAC 61.582 66.667 2.24 0.00 0.00 3.82
1526 1584 1.506718 TCGTCTCGACCTCATGCAC 59.493 57.895 0.00 0.00 0.00 4.57
1554 1616 1.293924 CCTGAATACTGCAAGGCGAG 58.706 55.000 0.00 0.00 39.30 5.03
1644 1706 2.657296 CGTTCACGCTCACCACGT 60.657 61.111 0.00 0.00 46.42 4.49
1934 1996 1.002087 ACCACCATCTTCGACACCTTC 59.998 52.381 0.00 0.00 0.00 3.46
2199 2265 8.114359 TGAGCTAATCTTTTGTTTCGTTTTTG 57.886 30.769 0.00 0.00 0.00 2.44
2210 2276 6.627690 TGTTTCGTTTTTGCGATTACAAAA 57.372 29.167 0.00 0.00 45.29 2.44
2241 2307 3.116063 CGCAAGTGCAATTCGTAATCA 57.884 42.857 0.00 0.00 42.21 2.57
2242 2308 2.840176 CGCAAGTGCAATTCGTAATCAC 59.160 45.455 0.00 0.00 42.21 3.06
2243 2309 2.840176 GCAAGTGCAATTCGTAATCACG 59.160 45.455 0.00 0.00 44.51 4.35
2292 2358 0.866427 CACTGTCACTGAGCTTGCTG 59.134 55.000 0.00 0.00 0.00 4.41
2295 2361 1.302351 GTCACTGAGCTTGCTGCCT 60.302 57.895 0.00 0.00 44.23 4.75
2311 2377 3.369892 GCTGCCTCTTTGATCTCTACCAA 60.370 47.826 0.00 0.00 0.00 3.67
2321 2387 8.766476 TCTTTGATCTCTACCAATGAATCTTCT 58.234 33.333 0.00 0.00 0.00 2.85
2328 2394 9.480861 TCTCTACCAATGAATCTTCTCTAAAGA 57.519 33.333 0.00 0.00 0.00 2.52
2361 2427 5.707298 TCTCTTTCCAATTCACCTTCATGTC 59.293 40.000 0.00 0.00 0.00 3.06
2369 2435 4.856801 CCTTCATGTCCCCCGGCG 62.857 72.222 0.00 0.00 0.00 6.46
2372 2438 2.246761 CTTCATGTCCCCCGGCGTAA 62.247 60.000 6.01 0.00 0.00 3.18
2380 2446 1.202675 TCCCCCGGCGTAATATTCAAC 60.203 52.381 6.01 0.00 0.00 3.18
2383 2449 2.567985 CCCGGCGTAATATTCAACCTT 58.432 47.619 6.01 0.00 0.00 3.50
2384 2450 3.494749 CCCCGGCGTAATATTCAACCTTA 60.495 47.826 6.01 0.00 0.00 2.69
2385 2451 4.320870 CCCGGCGTAATATTCAACCTTAT 58.679 43.478 6.01 0.00 0.00 1.73
2386 2452 4.390909 CCCGGCGTAATATTCAACCTTATC 59.609 45.833 6.01 0.00 0.00 1.75
2387 2453 4.390909 CCGGCGTAATATTCAACCTTATCC 59.609 45.833 6.01 0.00 0.00 2.59
2388 2454 4.992319 CGGCGTAATATTCAACCTTATCCA 59.008 41.667 0.00 0.00 0.00 3.41
2389 2455 5.107220 CGGCGTAATATTCAACCTTATCCAC 60.107 44.000 0.00 0.00 0.00 4.02
2390 2456 5.995897 GGCGTAATATTCAACCTTATCCACT 59.004 40.000 0.00 0.00 0.00 4.00
2391 2457 6.147328 GGCGTAATATTCAACCTTATCCACTC 59.853 42.308 0.00 0.00 0.00 3.51
2392 2458 6.704493 GCGTAATATTCAACCTTATCCACTCA 59.296 38.462 0.00 0.00 0.00 3.41
2393 2459 7.307219 GCGTAATATTCAACCTTATCCACTCAC 60.307 40.741 0.00 0.00 0.00 3.51
2394 2460 7.709182 CGTAATATTCAACCTTATCCACTCACA 59.291 37.037 0.00 0.00 0.00 3.58
2395 2461 9.391006 GTAATATTCAACCTTATCCACTCACAA 57.609 33.333 0.00 0.00 0.00 3.33
2396 2462 8.511604 AATATTCAACCTTATCCACTCACAAG 57.488 34.615 0.00 0.00 0.00 3.16
2397 2463 5.560722 TTCAACCTTATCCACTCACAAGA 57.439 39.130 0.00 0.00 0.00 3.02
2398 2464 5.560722 TCAACCTTATCCACTCACAAGAA 57.439 39.130 0.00 0.00 0.00 2.52
2399 2465 5.935945 TCAACCTTATCCACTCACAAGAAA 58.064 37.500 0.00 0.00 0.00 2.52
2400 2466 6.361433 TCAACCTTATCCACTCACAAGAAAA 58.639 36.000 0.00 0.00 0.00 2.29
2401 2467 6.262273 TCAACCTTATCCACTCACAAGAAAAC 59.738 38.462 0.00 0.00 0.00 2.43
2402 2468 5.070685 ACCTTATCCACTCACAAGAAAACC 58.929 41.667 0.00 0.00 0.00 3.27
2403 2469 4.459337 CCTTATCCACTCACAAGAAAACCC 59.541 45.833 0.00 0.00 0.00 4.11
2404 2470 3.884037 ATCCACTCACAAGAAAACCCT 57.116 42.857 0.00 0.00 0.00 4.34
2405 2471 3.662759 TCCACTCACAAGAAAACCCTT 57.337 42.857 0.00 0.00 0.00 3.95
2406 2472 3.287222 TCCACTCACAAGAAAACCCTTG 58.713 45.455 0.00 0.00 46.61 3.61
2419 2485 9.034544 CAAGAAAACCCTTGTAAATCTCTTTTG 57.965 33.333 0.00 0.00 38.87 2.44
2420 2486 8.533569 AGAAAACCCTTGTAAATCTCTTTTGA 57.466 30.769 0.00 0.00 0.00 2.69
2444 2510 9.367160 TGAGATACATATAGTGATTCTTGGTCA 57.633 33.333 0.00 0.00 0.00 4.02
2462 2528 9.919416 TCTTGGTCATATAAATTTTGAGGATGA 57.081 29.630 0.00 0.00 0.00 2.92
2466 2532 9.750125 GGTCATATAAATTTTGAGGATGAAACC 57.250 33.333 0.00 0.00 0.00 3.27
2471 2537 5.728637 AATTTTGAGGATGAAACCACTCC 57.271 39.130 0.00 0.00 0.00 3.85
2472 2538 3.874383 TTTGAGGATGAAACCACTCCA 57.126 42.857 0.00 0.00 0.00 3.86
2473 2539 4.387026 TTTGAGGATGAAACCACTCCAT 57.613 40.909 0.00 0.00 0.00 3.41
2474 2540 4.387026 TTGAGGATGAAACCACTCCATT 57.613 40.909 0.00 0.00 0.00 3.16
2475 2541 3.955471 TGAGGATGAAACCACTCCATTC 58.045 45.455 0.00 0.00 0.00 2.67
2476 2542 3.330405 TGAGGATGAAACCACTCCATTCA 59.670 43.478 0.00 0.00 37.47 2.57
2477 2543 4.018141 TGAGGATGAAACCACTCCATTCAT 60.018 41.667 0.22 0.22 44.23 2.57
2478 2544 4.939255 AGGATGAAACCACTCCATTCATT 58.061 39.130 2.18 0.00 42.26 2.57
2479 2545 6.078456 AGGATGAAACCACTCCATTCATTA 57.922 37.500 2.18 0.00 42.26 1.90
2480 2546 5.888161 AGGATGAAACCACTCCATTCATTAC 59.112 40.000 2.18 0.27 42.26 1.89
2481 2547 5.652014 GGATGAAACCACTCCATTCATTACA 59.348 40.000 2.18 0.00 42.26 2.41
2482 2548 6.183360 GGATGAAACCACTCCATTCATTACAG 60.183 42.308 2.18 0.00 42.26 2.74
2483 2549 5.875224 TGAAACCACTCCATTCATTACAGA 58.125 37.500 0.00 0.00 0.00 3.41
2484 2550 6.303054 TGAAACCACTCCATTCATTACAGAA 58.697 36.000 0.00 0.00 0.00 3.02
2485 2551 6.947733 TGAAACCACTCCATTCATTACAGAAT 59.052 34.615 0.00 0.00 38.72 2.40
2486 2552 7.451255 TGAAACCACTCCATTCATTACAGAATT 59.549 33.333 0.00 0.00 36.13 2.17
2487 2553 7.396540 AACCACTCCATTCATTACAGAATTC 57.603 36.000 0.00 0.00 36.13 2.17
2488 2554 6.725364 ACCACTCCATTCATTACAGAATTCT 58.275 36.000 0.88 0.88 36.13 2.40
2489 2555 7.177878 ACCACTCCATTCATTACAGAATTCTT 58.822 34.615 4.86 0.43 36.13 2.52
2490 2556 8.328758 ACCACTCCATTCATTACAGAATTCTTA 58.671 33.333 4.86 0.00 36.13 2.10
2491 2557 9.347240 CCACTCCATTCATTACAGAATTCTTAT 57.653 33.333 4.86 0.00 36.13 1.73
2493 2559 9.347240 ACTCCATTCATTACAGAATTCTTATGG 57.653 33.333 4.86 9.89 36.13 2.74
2494 2560 9.347240 CTCCATTCATTACAGAATTCTTATGGT 57.653 33.333 4.86 3.26 36.13 3.55
2495 2561 9.123902 TCCATTCATTACAGAATTCTTATGGTG 57.876 33.333 4.86 11.31 36.13 4.17
2496 2562 8.355169 CCATTCATTACAGAATTCTTATGGTGG 58.645 37.037 4.86 15.22 36.13 4.61
2497 2563 8.906867 CATTCATTACAGAATTCTTATGGTGGT 58.093 33.333 4.86 1.36 36.13 4.16
2498 2564 8.877864 TTCATTACAGAATTCTTATGGTGGTT 57.122 30.769 4.86 0.00 0.00 3.67
2499 2565 8.877864 TCATTACAGAATTCTTATGGTGGTTT 57.122 30.769 4.86 0.00 0.00 3.27
2500 2566 9.308000 TCATTACAGAATTCTTATGGTGGTTTT 57.692 29.630 4.86 0.00 0.00 2.43
2503 2569 9.802039 TTACAGAATTCTTATGGTGGTTTTAGT 57.198 29.630 4.86 0.00 0.00 2.24
2504 2570 8.706322 ACAGAATTCTTATGGTGGTTTTAGTT 57.294 30.769 4.86 0.00 0.00 2.24
2505 2571 8.576442 ACAGAATTCTTATGGTGGTTTTAGTTG 58.424 33.333 4.86 0.00 0.00 3.16
2506 2572 8.792633 CAGAATTCTTATGGTGGTTTTAGTTGA 58.207 33.333 4.86 0.00 0.00 3.18
2507 2573 9.362151 AGAATTCTTATGGTGGTTTTAGTTGAA 57.638 29.630 0.88 0.00 0.00 2.69
2508 2574 9.626045 GAATTCTTATGGTGGTTTTAGTTGAAG 57.374 33.333 0.00 0.00 0.00 3.02
2509 2575 8.934023 ATTCTTATGGTGGTTTTAGTTGAAGA 57.066 30.769 0.00 0.00 0.00 2.87
2510 2576 8.754991 TTCTTATGGTGGTTTTAGTTGAAGAA 57.245 30.769 0.00 0.00 0.00 2.52
2511 2577 8.934023 TCTTATGGTGGTTTTAGTTGAAGAAT 57.066 30.769 0.00 0.00 0.00 2.40
2512 2578 9.362151 TCTTATGGTGGTTTTAGTTGAAGAATT 57.638 29.630 0.00 0.00 0.00 2.17
2516 2582 7.891561 TGGTGGTTTTAGTTGAAGAATTATGG 58.108 34.615 0.00 0.00 0.00 2.74
2517 2583 7.726291 TGGTGGTTTTAGTTGAAGAATTATGGA 59.274 33.333 0.00 0.00 0.00 3.41
2518 2584 8.581578 GGTGGTTTTAGTTGAAGAATTATGGAA 58.418 33.333 0.00 0.00 0.00 3.53
2519 2585 9.406828 GTGGTTTTAGTTGAAGAATTATGGAAC 57.593 33.333 0.00 0.00 0.00 3.62
2520 2586 8.293867 TGGTTTTAGTTGAAGAATTATGGAACG 58.706 33.333 0.00 0.00 0.00 3.95
2521 2587 7.753580 GGTTTTAGTTGAAGAATTATGGAACGG 59.246 37.037 0.00 0.00 0.00 4.44
2522 2588 8.508875 GTTTTAGTTGAAGAATTATGGAACGGA 58.491 33.333 0.00 0.00 0.00 4.69
2523 2589 7.843490 TTAGTTGAAGAATTATGGAACGGAG 57.157 36.000 0.00 0.00 0.00 4.63
2524 2590 5.186198 AGTTGAAGAATTATGGAACGGAGG 58.814 41.667 0.00 0.00 0.00 4.30
2525 2591 4.150897 TGAAGAATTATGGAACGGAGGG 57.849 45.455 0.00 0.00 0.00 4.30
2526 2592 3.118038 TGAAGAATTATGGAACGGAGGGG 60.118 47.826 0.00 0.00 0.00 4.79
2527 2593 1.774856 AGAATTATGGAACGGAGGGGG 59.225 52.381 0.00 0.00 0.00 5.40
2528 2594 1.493446 GAATTATGGAACGGAGGGGGT 59.507 52.381 0.00 0.00 0.00 4.95
2529 2595 2.500269 ATTATGGAACGGAGGGGGTA 57.500 50.000 0.00 0.00 0.00 3.69
2530 2596 1.499368 TTATGGAACGGAGGGGGTAC 58.501 55.000 0.00 0.00 0.00 3.34
2543 2609 3.276281 GGGTACCGAAATTGGCCTT 57.724 52.632 3.32 0.00 40.86 4.35
2544 2610 1.552578 GGGTACCGAAATTGGCCTTT 58.447 50.000 3.32 0.00 40.86 3.11
2545 2611 1.203758 GGGTACCGAAATTGGCCTTTG 59.796 52.381 3.32 0.00 40.86 2.77
2546 2612 1.890489 GGTACCGAAATTGGCCTTTGT 59.110 47.619 3.32 0.00 0.00 2.83
2547 2613 2.297880 GGTACCGAAATTGGCCTTTGTT 59.702 45.455 3.32 0.00 0.00 2.83
2548 2614 2.524569 ACCGAAATTGGCCTTTGTTG 57.475 45.000 3.32 0.00 0.00 3.33
2549 2615 1.760029 ACCGAAATTGGCCTTTGTTGT 59.240 42.857 3.32 0.00 0.00 3.32
2550 2616 2.134346 CCGAAATTGGCCTTTGTTGTG 58.866 47.619 3.32 0.00 0.00 3.33
2551 2617 2.223923 CCGAAATTGGCCTTTGTTGTGA 60.224 45.455 3.32 0.00 0.00 3.58
2552 2618 3.052036 CGAAATTGGCCTTTGTTGTGAG 58.948 45.455 3.32 0.00 0.00 3.51
2553 2619 3.243367 CGAAATTGGCCTTTGTTGTGAGA 60.243 43.478 3.32 0.00 0.00 3.27
2554 2620 4.301628 GAAATTGGCCTTTGTTGTGAGAG 58.698 43.478 3.32 0.00 0.00 3.20
2555 2621 1.032014 TTGGCCTTTGTTGTGAGAGC 58.968 50.000 3.32 0.00 0.00 4.09
2556 2622 0.183492 TGGCCTTTGTTGTGAGAGCT 59.817 50.000 3.32 0.00 0.00 4.09
2557 2623 0.595095 GGCCTTTGTTGTGAGAGCTG 59.405 55.000 0.00 0.00 0.00 4.24
2558 2624 1.597742 GCCTTTGTTGTGAGAGCTGA 58.402 50.000 0.00 0.00 0.00 4.26
2559 2625 1.534595 GCCTTTGTTGTGAGAGCTGAG 59.465 52.381 0.00 0.00 0.00 3.35
2560 2626 2.808202 GCCTTTGTTGTGAGAGCTGAGA 60.808 50.000 0.00 0.00 0.00 3.27
2561 2627 3.470709 CCTTTGTTGTGAGAGCTGAGAA 58.529 45.455 0.00 0.00 0.00 2.87
2562 2628 3.249559 CCTTTGTTGTGAGAGCTGAGAAC 59.750 47.826 0.00 0.00 0.00 3.01
2563 2629 3.827008 TTGTTGTGAGAGCTGAGAACT 57.173 42.857 0.00 0.00 0.00 3.01
2564 2630 3.827008 TGTTGTGAGAGCTGAGAACTT 57.173 42.857 0.00 0.00 0.00 2.66
2565 2631 4.142609 TGTTGTGAGAGCTGAGAACTTT 57.857 40.909 0.00 0.00 0.00 2.66
2566 2632 3.873361 TGTTGTGAGAGCTGAGAACTTTG 59.127 43.478 0.00 0.00 0.00 2.77
2567 2633 3.827008 TGTGAGAGCTGAGAACTTTGT 57.173 42.857 0.00 0.00 0.00 2.83
2568 2634 4.142609 TGTGAGAGCTGAGAACTTTGTT 57.857 40.909 0.00 0.00 0.00 2.83
2569 2635 3.873361 TGTGAGAGCTGAGAACTTTGTTG 59.127 43.478 0.00 0.00 0.00 3.33
2570 2636 3.873952 GTGAGAGCTGAGAACTTTGTTGT 59.126 43.478 0.00 0.00 0.00 3.32
2571 2637 4.025313 GTGAGAGCTGAGAACTTTGTTGTC 60.025 45.833 0.00 1.37 0.00 3.18
2572 2638 4.141846 TGAGAGCTGAGAACTTTGTTGTCT 60.142 41.667 0.00 0.00 0.00 3.41
2573 2639 4.775236 AGAGCTGAGAACTTTGTTGTCTT 58.225 39.130 0.00 0.00 0.00 3.01
2574 2640 5.189180 AGAGCTGAGAACTTTGTTGTCTTT 58.811 37.500 0.00 0.00 0.00 2.52
2575 2641 5.065731 AGAGCTGAGAACTTTGTTGTCTTTG 59.934 40.000 0.00 2.12 0.00 2.77
2576 2642 4.096984 AGCTGAGAACTTTGTTGTCTTTGG 59.903 41.667 8.61 0.29 0.00 3.28
2577 2643 4.354587 CTGAGAACTTTGTTGTCTTTGGC 58.645 43.478 8.61 0.00 0.00 4.52
2578 2644 3.130340 TGAGAACTTTGTTGTCTTTGGCC 59.870 43.478 0.00 0.00 0.00 5.36
2579 2645 3.365472 AGAACTTTGTTGTCTTTGGCCT 58.635 40.909 3.32 0.00 0.00 5.19
2580 2646 3.769300 AGAACTTTGTTGTCTTTGGCCTT 59.231 39.130 3.32 0.00 0.00 4.35
2581 2647 3.525268 ACTTTGTTGTCTTTGGCCTTG 57.475 42.857 3.32 0.00 0.00 3.61
2582 2648 2.831526 ACTTTGTTGTCTTTGGCCTTGT 59.168 40.909 3.32 0.00 0.00 3.16
2583 2649 4.020543 ACTTTGTTGTCTTTGGCCTTGTA 58.979 39.130 3.32 0.00 0.00 2.41
2584 2650 4.649218 ACTTTGTTGTCTTTGGCCTTGTAT 59.351 37.500 3.32 0.00 0.00 2.29
2585 2651 5.830991 ACTTTGTTGTCTTTGGCCTTGTATA 59.169 36.000 3.32 0.00 0.00 1.47
2586 2652 5.957842 TTGTTGTCTTTGGCCTTGTATAG 57.042 39.130 3.32 0.00 0.00 1.31
2587 2653 3.756434 TGTTGTCTTTGGCCTTGTATAGC 59.244 43.478 3.32 0.00 0.00 2.97
2588 2654 4.010349 GTTGTCTTTGGCCTTGTATAGCT 58.990 43.478 3.32 0.00 0.00 3.32
2589 2655 4.301072 TGTCTTTGGCCTTGTATAGCTT 57.699 40.909 3.32 0.00 0.00 3.74
2590 2656 4.261801 TGTCTTTGGCCTTGTATAGCTTC 58.738 43.478 3.32 0.00 0.00 3.86
2591 2657 4.261801 GTCTTTGGCCTTGTATAGCTTCA 58.738 43.478 3.32 0.00 0.00 3.02
2592 2658 4.333926 GTCTTTGGCCTTGTATAGCTTCAG 59.666 45.833 3.32 0.00 0.00 3.02
2593 2659 4.019321 TCTTTGGCCTTGTATAGCTTCAGT 60.019 41.667 3.32 0.00 0.00 3.41
2594 2660 5.188948 TCTTTGGCCTTGTATAGCTTCAGTA 59.811 40.000 3.32 0.00 0.00 2.74
2595 2661 4.672587 TGGCCTTGTATAGCTTCAGTAG 57.327 45.455 3.32 0.00 0.00 2.57
2596 2662 4.030913 TGGCCTTGTATAGCTTCAGTAGT 58.969 43.478 3.32 0.00 0.00 2.73
2597 2663 4.469945 TGGCCTTGTATAGCTTCAGTAGTT 59.530 41.667 3.32 0.00 0.00 2.24
2598 2664 4.811557 GGCCTTGTATAGCTTCAGTAGTTG 59.188 45.833 0.00 0.00 0.00 3.16
2599 2665 5.420409 GCCTTGTATAGCTTCAGTAGTTGT 58.580 41.667 0.00 0.00 0.00 3.32
2600 2666 6.406624 GGCCTTGTATAGCTTCAGTAGTTGTA 60.407 42.308 0.00 0.00 0.00 2.41
2601 2667 7.210873 GCCTTGTATAGCTTCAGTAGTTGTAT 58.789 38.462 0.00 0.00 0.00 2.29
2602 2668 7.382759 GCCTTGTATAGCTTCAGTAGTTGTATC 59.617 40.741 0.00 0.00 0.00 2.24
2603 2669 8.414003 CCTTGTATAGCTTCAGTAGTTGTATCA 58.586 37.037 0.00 0.00 0.00 2.15
2604 2670 9.239002 CTTGTATAGCTTCAGTAGTTGTATCAC 57.761 37.037 0.00 0.00 0.00 3.06
2605 2671 7.713750 TGTATAGCTTCAGTAGTTGTATCACC 58.286 38.462 0.00 0.00 0.00 4.02
2606 2672 6.791867 ATAGCTTCAGTAGTTGTATCACCA 57.208 37.500 0.00 0.00 0.00 4.17
2607 2673 5.078411 AGCTTCAGTAGTTGTATCACCAG 57.922 43.478 0.00 0.00 0.00 4.00
2608 2674 4.528596 AGCTTCAGTAGTTGTATCACCAGT 59.471 41.667 0.00 0.00 0.00 4.00
2609 2675 5.012148 AGCTTCAGTAGTTGTATCACCAGTT 59.988 40.000 0.00 0.00 0.00 3.16
2610 2676 5.701290 GCTTCAGTAGTTGTATCACCAGTTT 59.299 40.000 0.00 0.00 0.00 2.66
2611 2677 6.204882 GCTTCAGTAGTTGTATCACCAGTTTT 59.795 38.462 0.00 0.00 0.00 2.43
2612 2678 7.490962 TTCAGTAGTTGTATCACCAGTTTTG 57.509 36.000 0.00 0.00 0.00 2.44
2613 2679 6.822442 TCAGTAGTTGTATCACCAGTTTTGA 58.178 36.000 0.00 0.00 0.00 2.69
2614 2680 7.276658 TCAGTAGTTGTATCACCAGTTTTGAA 58.723 34.615 0.00 0.00 0.00 2.69
2615 2681 7.441157 TCAGTAGTTGTATCACCAGTTTTGAAG 59.559 37.037 0.00 0.00 0.00 3.02
2616 2682 5.438761 AGTTGTATCACCAGTTTTGAAGC 57.561 39.130 0.00 0.00 0.00 3.86
2617 2683 4.024048 AGTTGTATCACCAGTTTTGAAGCG 60.024 41.667 0.00 0.00 0.00 4.68
2618 2684 2.811431 TGTATCACCAGTTTTGAAGCGG 59.189 45.455 0.00 0.00 0.00 5.52
2619 2685 1.247567 ATCACCAGTTTTGAAGCGGG 58.752 50.000 0.00 0.00 0.00 6.13
2620 2686 0.106918 TCACCAGTTTTGAAGCGGGT 60.107 50.000 0.00 0.00 38.12 5.28
2621 2687 0.030638 CACCAGTTTTGAAGCGGGTG 59.969 55.000 13.38 13.38 45.26 4.61
2622 2688 1.007387 CCAGTTTTGAAGCGGGTGC 60.007 57.895 0.00 0.00 43.24 5.01
2635 2701 1.669265 GCGGGTGCTAGTTATGAAACC 59.331 52.381 0.00 0.00 35.61 3.27
2636 2702 2.937873 GCGGGTGCTAGTTATGAAACCA 60.938 50.000 0.00 0.00 35.61 3.67
2637 2703 3.541632 CGGGTGCTAGTTATGAAACCAT 58.458 45.455 0.00 0.00 36.15 3.55
2638 2704 4.699637 CGGGTGCTAGTTATGAAACCATA 58.300 43.478 0.00 0.00 36.15 2.74
2639 2705 5.305585 CGGGTGCTAGTTATGAAACCATAT 58.694 41.667 0.00 0.00 36.15 1.78
2640 2706 5.179368 CGGGTGCTAGTTATGAAACCATATG 59.821 44.000 0.00 0.00 36.15 1.78
2641 2707 5.473504 GGGTGCTAGTTATGAAACCATATGG 59.526 44.000 20.68 20.68 36.15 2.74
2656 2722 2.421314 TGGTGACAGTGCTCGTGG 59.579 61.111 0.00 0.00 35.01 4.94
2657 2723 2.357517 GGTGACAGTGCTCGTGGG 60.358 66.667 0.00 0.00 0.00 4.61
2658 2724 2.421739 GTGACAGTGCTCGTGGGT 59.578 61.111 0.00 0.00 0.00 4.51
2659 2725 1.956170 GTGACAGTGCTCGTGGGTG 60.956 63.158 0.00 0.00 0.00 4.61
2660 2726 3.044305 GACAGTGCTCGTGGGTGC 61.044 66.667 0.00 0.00 0.00 5.01
2661 2727 4.969196 ACAGTGCTCGTGGGTGCG 62.969 66.667 0.00 0.00 35.46 5.34
2662 2728 4.969196 CAGTGCTCGTGGGTGCGT 62.969 66.667 0.00 0.00 35.46 5.24
2663 2729 4.969196 AGTGCTCGTGGGTGCGTG 62.969 66.667 0.00 0.00 35.46 5.34
2667 2733 3.991051 CTCGTGGGTGCGTGGTCT 61.991 66.667 0.00 0.00 0.00 3.85
2668 2734 4.293648 TCGTGGGTGCGTGGTCTG 62.294 66.667 0.00 0.00 0.00 3.51
2670 2736 4.626081 GTGGGTGCGTGGTCTGCT 62.626 66.667 0.00 0.00 0.00 4.24
2671 2737 4.624364 TGGGTGCGTGGTCTGCTG 62.624 66.667 0.00 0.00 0.00 4.41
2673 2739 4.626081 GGTGCGTGGTCTGCTGGT 62.626 66.667 0.00 0.00 0.00 4.00
2674 2740 3.349006 GTGCGTGGTCTGCTGGTG 61.349 66.667 0.00 0.00 0.00 4.17
2675 2741 3.860605 TGCGTGGTCTGCTGGTGT 61.861 61.111 0.00 0.00 0.00 4.16
2676 2742 2.591715 GCGTGGTCTGCTGGTGTT 60.592 61.111 0.00 0.00 0.00 3.32
2677 2743 2.896801 GCGTGGTCTGCTGGTGTTG 61.897 63.158 0.00 0.00 0.00 3.33
2678 2744 2.253758 CGTGGTCTGCTGGTGTTGG 61.254 63.158 0.00 0.00 0.00 3.77
2679 2745 1.152963 GTGGTCTGCTGGTGTTGGT 60.153 57.895 0.00 0.00 0.00 3.67
2680 2746 1.148273 TGGTCTGCTGGTGTTGGTC 59.852 57.895 0.00 0.00 0.00 4.02
2681 2747 1.344953 TGGTCTGCTGGTGTTGGTCT 61.345 55.000 0.00 0.00 0.00 3.85
2682 2748 0.685097 GGTCTGCTGGTGTTGGTCTA 59.315 55.000 0.00 0.00 0.00 2.59
2683 2749 1.608283 GGTCTGCTGGTGTTGGTCTAC 60.608 57.143 0.00 0.00 0.00 2.59
2684 2750 1.344763 GTCTGCTGGTGTTGGTCTACT 59.655 52.381 0.00 0.00 0.00 2.57
2685 2751 1.618837 TCTGCTGGTGTTGGTCTACTC 59.381 52.381 0.00 0.00 0.00 2.59
2686 2752 1.620819 CTGCTGGTGTTGGTCTACTCT 59.379 52.381 0.00 0.00 0.00 3.24
2687 2753 2.037772 CTGCTGGTGTTGGTCTACTCTT 59.962 50.000 0.00 0.00 0.00 2.85
2688 2754 2.438021 TGCTGGTGTTGGTCTACTCTTT 59.562 45.455 0.00 0.00 0.00 2.52
2689 2755 3.118038 TGCTGGTGTTGGTCTACTCTTTT 60.118 43.478 0.00 0.00 0.00 2.27
2690 2756 3.251004 GCTGGTGTTGGTCTACTCTTTTG 59.749 47.826 0.00 0.00 0.00 2.44
2691 2757 4.451900 CTGGTGTTGGTCTACTCTTTTGT 58.548 43.478 0.00 0.00 0.00 2.83
2692 2758 4.196193 TGGTGTTGGTCTACTCTTTTGTG 58.804 43.478 0.00 0.00 0.00 3.33
2693 2759 4.196971 GGTGTTGGTCTACTCTTTTGTGT 58.803 43.478 0.00 0.00 0.00 3.72
2694 2760 4.035208 GGTGTTGGTCTACTCTTTTGTGTG 59.965 45.833 0.00 0.00 0.00 3.82
2695 2761 4.634443 GTGTTGGTCTACTCTTTTGTGTGT 59.366 41.667 0.00 0.00 0.00 3.72
2696 2762 5.813672 GTGTTGGTCTACTCTTTTGTGTGTA 59.186 40.000 0.00 0.00 0.00 2.90
2697 2763 6.314400 GTGTTGGTCTACTCTTTTGTGTGTAA 59.686 38.462 0.00 0.00 0.00 2.41
2698 2764 6.314400 TGTTGGTCTACTCTTTTGTGTGTAAC 59.686 38.462 0.00 0.00 37.35 2.50
2721 2787 8.688747 AACATCCCAAAATTCTAAATTTTGCA 57.311 26.923 23.13 15.73 43.73 4.08
2722 2788 8.688747 ACATCCCAAAATTCTAAATTTTGCAA 57.311 26.923 23.13 16.41 43.73 4.08
2723 2789 9.299465 ACATCCCAAAATTCTAAATTTTGCAAT 57.701 25.926 23.13 17.41 43.73 3.56
2724 2790 9.562583 CATCCCAAAATTCTAAATTTTGCAATG 57.437 29.630 23.13 21.85 43.73 2.82
2725 2791 8.688747 TCCCAAAATTCTAAATTTTGCAATGT 57.311 26.923 23.13 0.00 43.73 2.71
2726 2792 9.129532 TCCCAAAATTCTAAATTTTGCAATGTT 57.870 25.926 23.13 0.00 43.73 2.71
2767 2833 9.458727 AATATGATTGATTGACAGAAACTGAGT 57.541 29.630 5.76 0.00 35.18 3.41
2768 2834 6.549912 TGATTGATTGACAGAAACTGAGTG 57.450 37.500 5.76 0.00 35.18 3.51
2769 2835 6.290605 TGATTGATTGACAGAAACTGAGTGA 58.709 36.000 5.76 0.00 35.18 3.41
2770 2836 6.767423 TGATTGATTGACAGAAACTGAGTGAA 59.233 34.615 5.76 0.00 35.18 3.18
2771 2837 7.282901 TGATTGATTGACAGAAACTGAGTGAAA 59.717 33.333 5.76 0.00 35.18 2.69
2772 2838 7.572523 TTGATTGACAGAAACTGAGTGAAAT 57.427 32.000 5.76 0.00 35.18 2.17
2773 2839 7.572523 TGATTGACAGAAACTGAGTGAAATT 57.427 32.000 5.76 0.00 35.18 1.82
2774 2840 7.999679 TGATTGACAGAAACTGAGTGAAATTT 58.000 30.769 5.76 0.00 35.18 1.82
2775 2841 7.916977 TGATTGACAGAAACTGAGTGAAATTTG 59.083 33.333 0.00 0.00 35.18 2.32
2776 2842 6.757897 TGACAGAAACTGAGTGAAATTTGT 57.242 33.333 0.00 0.00 35.18 2.83
2777 2843 7.156876 TGACAGAAACTGAGTGAAATTTGTT 57.843 32.000 0.00 0.00 35.18 2.83
2778 2844 7.601856 TGACAGAAACTGAGTGAAATTTGTTT 58.398 30.769 0.00 0.00 35.18 2.83
2779 2845 8.087750 TGACAGAAACTGAGTGAAATTTGTTTT 58.912 29.630 0.00 0.00 35.18 2.43
2780 2846 8.831715 ACAGAAACTGAGTGAAATTTGTTTTT 57.168 26.923 0.00 0.00 35.18 1.94
2802 2868 3.398954 TTTAAGTTGAATGATCGCGGC 57.601 42.857 6.13 0.00 0.00 6.53
2803 2869 1.295792 TAAGTTGAATGATCGCGGCC 58.704 50.000 6.13 0.00 0.00 6.13
2804 2870 1.705337 AAGTTGAATGATCGCGGCCG 61.705 55.000 24.05 24.05 0.00 6.13
2805 2871 2.125310 TTGAATGATCGCGGCCGT 60.125 55.556 28.70 6.76 35.54 5.68
2806 2872 2.171079 TTGAATGATCGCGGCCGTC 61.171 57.895 28.70 17.37 35.54 4.79
2807 2873 3.692367 GAATGATCGCGGCCGTCG 61.692 66.667 28.70 28.41 42.76 5.12
2819 2885 4.351938 CCGTCGGACAACGCTGGA 62.352 66.667 4.91 0.00 43.86 3.86
2820 2886 2.805353 CGTCGGACAACGCTGGAG 60.805 66.667 9.10 0.00 43.86 3.86
2821 2887 3.112709 GTCGGACAACGCTGGAGC 61.113 66.667 2.62 0.00 43.86 4.70
2822 2888 4.373116 TCGGACAACGCTGGAGCC 62.373 66.667 0.00 0.00 43.86 4.70
2824 2890 4.021925 GGACAACGCTGGAGCCCT 62.022 66.667 0.00 0.00 37.91 5.19
2825 2891 2.435059 GACAACGCTGGAGCCCTC 60.435 66.667 0.00 0.00 37.91 4.30
2838 2904 3.006728 CCCTCCCCACCGCTGTAA 61.007 66.667 0.00 0.00 0.00 2.41
2839 2905 2.584608 CCTCCCCACCGCTGTAAG 59.415 66.667 0.00 0.00 0.00 2.34
2850 2916 2.813908 CTGTAAGCCACCGACGCC 60.814 66.667 0.00 0.00 0.00 5.68
2851 2917 4.382320 TGTAAGCCACCGACGCCC 62.382 66.667 0.00 0.00 0.00 6.13
2852 2918 4.078516 GTAAGCCACCGACGCCCT 62.079 66.667 0.00 0.00 0.00 5.19
2853 2919 3.766691 TAAGCCACCGACGCCCTC 61.767 66.667 0.00 0.00 0.00 4.30
2857 2923 4.452733 CCACCGACGCCCTCCTTC 62.453 72.222 0.00 0.00 0.00 3.46
2858 2924 3.691342 CACCGACGCCCTCCTTCA 61.691 66.667 0.00 0.00 0.00 3.02
2859 2925 3.692406 ACCGACGCCCTCCTTCAC 61.692 66.667 0.00 0.00 0.00 3.18
2860 2926 3.382832 CCGACGCCCTCCTTCACT 61.383 66.667 0.00 0.00 0.00 3.41
2861 2927 2.050350 CCGACGCCCTCCTTCACTA 61.050 63.158 0.00 0.00 0.00 2.74
2862 2928 1.392710 CCGACGCCCTCCTTCACTAT 61.393 60.000 0.00 0.00 0.00 2.12
2863 2929 0.460311 CGACGCCCTCCTTCACTATT 59.540 55.000 0.00 0.00 0.00 1.73
2864 2930 1.679680 CGACGCCCTCCTTCACTATTA 59.320 52.381 0.00 0.00 0.00 0.98
2865 2931 2.100252 CGACGCCCTCCTTCACTATTAA 59.900 50.000 0.00 0.00 0.00 1.40
2866 2932 3.429822 CGACGCCCTCCTTCACTATTAAA 60.430 47.826 0.00 0.00 0.00 1.52
2867 2933 4.704965 GACGCCCTCCTTCACTATTAAAT 58.295 43.478 0.00 0.00 0.00 1.40
2868 2934 4.704965 ACGCCCTCCTTCACTATTAAATC 58.295 43.478 0.00 0.00 0.00 2.17
2869 2935 4.409247 ACGCCCTCCTTCACTATTAAATCT 59.591 41.667 0.00 0.00 0.00 2.40
2870 2936 4.752101 CGCCCTCCTTCACTATTAAATCTG 59.248 45.833 0.00 0.00 0.00 2.90
2871 2937 4.517075 GCCCTCCTTCACTATTAAATCTGC 59.483 45.833 0.00 0.00 0.00 4.26
2872 2938 5.684704 CCCTCCTTCACTATTAAATCTGCA 58.315 41.667 0.00 0.00 0.00 4.41
2873 2939 6.122277 CCCTCCTTCACTATTAAATCTGCAA 58.878 40.000 0.00 0.00 0.00 4.08
2874 2940 6.038714 CCCTCCTTCACTATTAAATCTGCAAC 59.961 42.308 0.00 0.00 0.00 4.17
2875 2941 6.238211 CCTCCTTCACTATTAAATCTGCAACG 60.238 42.308 0.00 0.00 0.00 4.10
2876 2942 6.170506 TCCTTCACTATTAAATCTGCAACGT 58.829 36.000 0.00 0.00 0.00 3.99
2877 2943 7.324935 TCCTTCACTATTAAATCTGCAACGTA 58.675 34.615 0.00 0.00 0.00 3.57
2878 2944 7.277098 TCCTTCACTATTAAATCTGCAACGTAC 59.723 37.037 0.00 0.00 0.00 3.67
2879 2945 6.563398 TCACTATTAAATCTGCAACGTACG 57.437 37.500 15.01 15.01 0.00 3.67
2880 2946 6.324042 TCACTATTAAATCTGCAACGTACGA 58.676 36.000 24.41 0.00 0.00 3.43
2881 2947 6.252015 TCACTATTAAATCTGCAACGTACGAC 59.748 38.462 24.41 11.35 0.00 4.34
2883 2949 2.054687 AAATCTGCAACGTACGACGA 57.945 45.000 24.41 10.32 46.05 4.20
2884 2950 2.273370 AATCTGCAACGTACGACGAT 57.727 45.000 24.41 12.08 46.05 3.73
2885 2951 2.273370 ATCTGCAACGTACGACGATT 57.727 45.000 24.41 2.09 46.05 3.34
2886 2952 2.898181 TCTGCAACGTACGACGATTA 57.102 45.000 24.41 0.00 46.05 1.75
2887 2953 2.777494 TCTGCAACGTACGACGATTAG 58.223 47.619 24.41 11.72 46.05 1.73
2888 2954 1.844357 CTGCAACGTACGACGATTAGG 59.156 52.381 24.41 2.87 46.05 2.69
2889 2955 1.199789 TGCAACGTACGACGATTAGGT 59.800 47.619 24.41 0.00 46.05 3.08
2890 2956 1.842546 GCAACGTACGACGATTAGGTC 59.157 52.381 24.41 0.00 46.05 3.85
2891 2957 2.728846 GCAACGTACGACGATTAGGTCA 60.729 50.000 24.41 0.00 46.05 4.02
2892 2958 3.688272 CAACGTACGACGATTAGGTCAT 58.312 45.455 24.41 0.00 46.05 3.06
2893 2959 3.599046 ACGTACGACGATTAGGTCATC 57.401 47.619 24.41 0.00 46.05 2.92
2912 2978 8.974408 AGGTCATCGTTTTTATTTTAAAAGCAC 58.026 29.630 6.79 0.00 0.00 4.40
2913 2979 7.942538 GGTCATCGTTTTTATTTTAAAAGCACG 59.057 33.333 6.79 9.49 32.40 5.34
2914 2980 8.683774 GTCATCGTTTTTATTTTAAAAGCACGA 58.316 29.630 17.62 17.62 38.81 4.35
2915 2981 9.234384 TCATCGTTTTTATTTTAAAAGCACGAA 57.766 25.926 18.51 7.87 38.38 3.85
2918 2984 8.411182 TCGTTTTTATTTTAAAAGCACGAATCG 58.589 29.630 14.99 0.00 35.07 3.34
2919 2985 8.202697 CGTTTTTATTTTAAAAGCACGAATCGT 58.797 29.630 0.96 0.96 42.36 3.73
2920 2986 9.838163 GTTTTTATTTTAAAAGCACGAATCGTT 57.162 25.926 5.20 0.00 38.32 3.85
2924 2990 7.924103 ATTTTAAAAGCACGAATCGTTTTCT 57.076 28.000 5.20 0.56 38.32 2.52
2926 2992 7.825627 TTTAAAAGCACGAATCGTTTTCTAC 57.174 32.000 5.20 0.00 38.32 2.59
2927 2993 5.668558 AAAAGCACGAATCGTTTTCTACT 57.331 34.783 5.20 0.00 38.32 2.57
2928 2994 6.774354 AAAAGCACGAATCGTTTTCTACTA 57.226 33.333 5.20 0.00 38.32 1.82
2929 2995 6.963049 AAAGCACGAATCGTTTTCTACTAT 57.037 33.333 5.20 0.00 38.32 2.12
2930 2996 8.470040 AAAAGCACGAATCGTTTTCTACTATA 57.530 30.769 5.20 0.00 38.32 1.31
2931 2997 8.644318 AAAGCACGAATCGTTTTCTACTATAT 57.356 30.769 5.20 0.00 38.32 0.86
2932 2998 8.644318 AAGCACGAATCGTTTTCTACTATATT 57.356 30.769 5.20 0.00 38.32 1.28
2933 2999 8.644318 AGCACGAATCGTTTTCTACTATATTT 57.356 30.769 5.20 0.00 38.32 1.40
2934 3000 8.753175 AGCACGAATCGTTTTCTACTATATTTC 58.247 33.333 5.20 0.00 38.32 2.17
2935 3001 7.730450 GCACGAATCGTTTTCTACTATATTTCG 59.270 37.037 5.20 0.00 38.32 3.46
2936 3002 8.205948 CACGAATCGTTTTCTACTATATTTCGG 58.794 37.037 5.20 0.00 38.32 4.30
2937 3003 7.096312 ACGAATCGTTTTCTACTATATTTCGGC 60.096 37.037 0.96 0.00 36.35 5.54
2938 3004 7.417496 AATCGTTTTCTACTATATTTCGGCC 57.583 36.000 0.00 0.00 0.00 6.13
2939 3005 4.977963 TCGTTTTCTACTATATTTCGGCCG 59.022 41.667 22.12 22.12 0.00 6.13
2940 3006 4.741676 CGTTTTCTACTATATTTCGGCCGT 59.258 41.667 27.15 8.80 0.00 5.68
2941 3007 5.108103 CGTTTTCTACTATATTTCGGCCGTC 60.108 44.000 27.15 0.00 0.00 4.79
2942 3008 4.510038 TTCTACTATATTTCGGCCGTCC 57.490 45.455 27.15 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 2.706890 TCTGGATCTTTTTGTACGGCC 58.293 47.619 0.00 0.00 0.00 6.13
99 100 7.129109 AGAAAACGATAACATTCGAACACAT 57.871 32.000 0.00 0.00 41.62 3.21
113 114 7.780008 TGTCAAAGAAGTGAAGAAAACGATA 57.220 32.000 0.00 0.00 0.00 2.92
214 219 7.971168 AGAGATTCAGATAAACAACACTAGTCG 59.029 37.037 0.00 0.00 0.00 4.18
219 224 7.220030 ACACAGAGATTCAGATAAACAACACT 58.780 34.615 0.00 0.00 0.00 3.55
239 244 5.679734 ACTTCATTCAGCTTTGTACACAG 57.320 39.130 4.59 4.59 0.00 3.66
309 316 2.282745 AGGACAAAGCAGGCTGCC 60.283 61.111 34.33 19.06 46.52 4.85
405 423 5.556915 TCTATTATTAGGGATGCAAACGGG 58.443 41.667 0.00 0.00 0.00 5.28
507 560 4.558226 TCAAGCCATTCACACATCTACT 57.442 40.909 0.00 0.00 0.00 2.57
527 580 5.600908 TCAAATACTGCTGGTAACGTTTC 57.399 39.130 5.91 0.00 42.51 2.78
532 585 6.927294 ATAGCTTCAAATACTGCTGGTAAC 57.073 37.500 0.00 0.00 37.02 2.50
533 586 8.482943 TCTTATAGCTTCAAATACTGCTGGTAA 58.517 33.333 0.00 0.00 37.02 2.85
548 601 6.980978 GCCCCTTTGAATTTTCTTATAGCTTC 59.019 38.462 0.00 0.00 0.00 3.86
557 610 1.546029 GCTCGCCCCTTTGAATTTTCT 59.454 47.619 0.00 0.00 0.00 2.52
566 620 2.753043 CATGCAGCTCGCCCCTTT 60.753 61.111 0.00 0.00 41.33 3.11
587 641 1.901159 TGCATTTTGGTCCTTCATGGG 59.099 47.619 0.00 0.00 36.20 4.00
597 651 7.944729 AATAACTGTAGAGATGCATTTTGGT 57.055 32.000 0.00 0.00 0.00 3.67
609 663 4.649674 TCTGGCCCTGTAATAACTGTAGAG 59.350 45.833 0.00 0.00 0.00 2.43
633 687 2.030274 GCGTAAAAATGACCTTGGCAGT 60.030 45.455 0.00 0.00 0.00 4.40
705 760 1.044790 GGATTGGATGGTGGGGCTTG 61.045 60.000 0.00 0.00 0.00 4.01
714 769 1.451936 GAGACCCCGGATTGGATGG 59.548 63.158 0.73 0.00 42.00 3.51
892 947 1.279846 CACGGGGTACAAATAGGGTGT 59.720 52.381 0.00 0.00 0.00 4.16
1526 1584 4.848562 TGCAGTATTCAGGTCCTATACG 57.151 45.455 6.27 3.94 31.62 3.06
1554 1616 0.366871 CGTTGCACAGATCAGTACGC 59.633 55.000 0.00 0.00 0.00 4.42
1644 1706 1.137675 CAGCACCTCGATCCAGATCAA 59.862 52.381 8.31 0.00 37.69 2.57
1771 1833 1.274728 GCTGCAGAGTCTCCTTCTTCA 59.725 52.381 20.43 0.00 0.00 3.02
1874 1936 1.152756 GGTGGCCCAGTTGTTGAGT 60.153 57.895 0.00 0.00 0.00 3.41
1934 1996 0.179134 CGACCACTTAAGAGGAGCCG 60.179 60.000 23.81 18.13 0.00 5.52
2005 2067 1.214367 CCAAAGCACGTTCGTACACT 58.786 50.000 0.00 0.00 0.00 3.55
2199 2265 4.670621 CGTGGATGCTATTTTTGTAATCGC 59.329 41.667 0.00 0.00 0.00 4.58
2210 2276 0.734889 GCACTTGCGTGGATGCTATT 59.265 50.000 0.00 0.00 41.51 1.73
2235 2301 4.550831 CGGTCAATTCTGCATCGTGATTAC 60.551 45.833 0.00 0.00 0.00 1.89
2236 2302 3.555547 CGGTCAATTCTGCATCGTGATTA 59.444 43.478 0.00 0.00 0.00 1.75
2237 2303 2.352651 CGGTCAATTCTGCATCGTGATT 59.647 45.455 0.00 0.00 0.00 2.57
2238 2304 1.935873 CGGTCAATTCTGCATCGTGAT 59.064 47.619 0.00 0.00 0.00 3.06
2239 2305 1.358877 CGGTCAATTCTGCATCGTGA 58.641 50.000 0.00 0.00 0.00 4.35
2240 2306 0.374758 CCGGTCAATTCTGCATCGTG 59.625 55.000 0.00 0.00 0.00 4.35
2241 2307 0.744414 CCCGGTCAATTCTGCATCGT 60.744 55.000 0.00 0.00 0.00 3.73
2242 2308 0.461870 TCCCGGTCAATTCTGCATCG 60.462 55.000 0.00 0.00 0.00 3.84
2243 2309 1.017387 GTCCCGGTCAATTCTGCATC 58.983 55.000 0.00 0.00 0.00 3.91
2244 2310 0.394352 GGTCCCGGTCAATTCTGCAT 60.394 55.000 0.00 0.00 0.00 3.96
2245 2311 1.002624 GGTCCCGGTCAATTCTGCA 60.003 57.895 0.00 0.00 0.00 4.41
2246 2312 2.106683 CGGTCCCGGTCAATTCTGC 61.107 63.158 0.00 0.00 35.56 4.26
2268 2334 2.313172 GCTCAGTGACAGTGTGGCG 61.313 63.158 0.00 0.00 0.00 5.69
2278 2344 1.004080 GAGGCAGCAAGCTCAGTGA 60.004 57.895 0.00 0.00 44.79 3.41
2292 2358 5.028549 TCATTGGTAGAGATCAAAGAGGC 57.971 43.478 0.00 0.00 0.00 4.70
2295 2361 8.766476 AGAAGATTCATTGGTAGAGATCAAAGA 58.234 33.333 0.00 0.00 0.00 2.52
2327 2393 7.970614 GGTGAATTGGAAAGAGAAATACATGTC 59.029 37.037 0.00 0.00 0.00 3.06
2328 2394 7.671398 AGGTGAATTGGAAAGAGAAATACATGT 59.329 33.333 2.69 2.69 0.00 3.21
2340 2406 4.082026 GGGACATGAAGGTGAATTGGAAAG 60.082 45.833 0.00 0.00 0.00 2.62
2347 2413 0.255890 CGGGGGACATGAAGGTGAAT 59.744 55.000 0.00 0.00 0.00 2.57
2361 2427 1.232119 GTTGAATATTACGCCGGGGG 58.768 55.000 23.83 9.88 0.00 5.40
2369 2435 8.958119 TGTGAGTGGATAAGGTTGAATATTAC 57.042 34.615 0.00 0.00 0.00 1.89
2372 2438 7.861629 TCTTGTGAGTGGATAAGGTTGAATAT 58.138 34.615 0.00 0.00 0.00 1.28
2380 2446 4.459337 GGGTTTTCTTGTGAGTGGATAAGG 59.541 45.833 0.00 0.00 0.00 2.69
2383 2449 4.993705 AGGGTTTTCTTGTGAGTGGATA 57.006 40.909 0.00 0.00 0.00 2.59
2384 2450 3.884037 AGGGTTTTCTTGTGAGTGGAT 57.116 42.857 0.00 0.00 0.00 3.41
2385 2451 3.287222 CAAGGGTTTTCTTGTGAGTGGA 58.713 45.455 0.00 0.00 39.27 4.02
2386 2452 3.715628 CAAGGGTTTTCTTGTGAGTGG 57.284 47.619 0.00 0.00 39.27 4.00
2393 2459 9.034544 CAAAAGAGATTTACAAGGGTTTTCTTG 57.965 33.333 3.39 3.39 46.86 3.02
2394 2460 8.977412 TCAAAAGAGATTTACAAGGGTTTTCTT 58.023 29.630 0.00 0.00 0.00 2.52
2395 2461 8.533569 TCAAAAGAGATTTACAAGGGTTTTCT 57.466 30.769 0.00 0.00 0.00 2.52
2396 2462 8.630037 TCTCAAAAGAGATTTACAAGGGTTTTC 58.370 33.333 0.00 0.00 0.00 2.29
2397 2463 8.533569 TCTCAAAAGAGATTTACAAGGGTTTT 57.466 30.769 0.00 0.00 0.00 2.43
2398 2464 8.712228 ATCTCAAAAGAGATTTACAAGGGTTT 57.288 30.769 2.29 0.00 38.67 3.27
2399 2465 9.232473 GTATCTCAAAAGAGATTTACAAGGGTT 57.768 33.333 12.65 0.00 41.65 4.11
2400 2466 8.383175 TGTATCTCAAAAGAGATTTACAAGGGT 58.617 33.333 12.65 0.00 41.65 4.34
2401 2467 8.792830 TGTATCTCAAAAGAGATTTACAAGGG 57.207 34.615 12.65 0.00 41.65 3.95
2418 2484 9.367160 TGACCAAGAATCACTATATGTATCTCA 57.633 33.333 0.00 0.00 0.00 3.27
2436 2502 9.919416 TCATCCTCAAAATTTATATGACCAAGA 57.081 29.630 0.00 0.00 0.00 3.02
2440 2506 9.750125 GGTTTCATCCTCAAAATTTATATGACC 57.250 33.333 0.00 0.00 0.00 4.02
2445 2511 8.966868 GGAGTGGTTTCATCCTCAAAATTTATA 58.033 33.333 0.00 0.00 0.00 0.98
2446 2512 7.454380 TGGAGTGGTTTCATCCTCAAAATTTAT 59.546 33.333 0.00 0.00 34.04 1.40
2447 2513 6.780031 TGGAGTGGTTTCATCCTCAAAATTTA 59.220 34.615 0.00 0.00 34.04 1.40
2448 2514 5.602145 TGGAGTGGTTTCATCCTCAAAATTT 59.398 36.000 0.00 0.00 34.04 1.82
2449 2515 5.147032 TGGAGTGGTTTCATCCTCAAAATT 58.853 37.500 0.00 0.00 34.04 1.82
2450 2516 4.739793 TGGAGTGGTTTCATCCTCAAAAT 58.260 39.130 0.00 0.00 34.04 1.82
2451 2517 4.177537 TGGAGTGGTTTCATCCTCAAAA 57.822 40.909 0.00 0.00 34.04 2.44
2452 2518 3.874383 TGGAGTGGTTTCATCCTCAAA 57.126 42.857 0.00 0.00 34.04 2.69
2453 2519 4.202556 TGAATGGAGTGGTTTCATCCTCAA 60.203 41.667 0.00 0.00 34.04 3.02
2454 2520 3.330405 TGAATGGAGTGGTTTCATCCTCA 59.670 43.478 0.00 0.00 34.04 3.86
2455 2521 3.955471 TGAATGGAGTGGTTTCATCCTC 58.045 45.455 0.00 0.00 34.04 3.71
2456 2522 4.598036 ATGAATGGAGTGGTTTCATCCT 57.402 40.909 0.00 0.00 35.70 3.24
2457 2523 5.652014 TGTAATGAATGGAGTGGTTTCATCC 59.348 40.000 0.00 0.00 38.73 3.51
2458 2524 6.599244 TCTGTAATGAATGGAGTGGTTTCATC 59.401 38.462 0.00 0.00 38.73 2.92
2459 2525 6.484288 TCTGTAATGAATGGAGTGGTTTCAT 58.516 36.000 0.00 0.00 40.78 2.57
2460 2526 5.875224 TCTGTAATGAATGGAGTGGTTTCA 58.125 37.500 0.00 0.00 34.18 2.69
2461 2527 6.817765 TTCTGTAATGAATGGAGTGGTTTC 57.182 37.500 0.00 0.00 0.00 2.78
2462 2528 7.671398 AGAATTCTGTAATGAATGGAGTGGTTT 59.329 33.333 7.30 0.00 36.84 3.27
2463 2529 7.177878 AGAATTCTGTAATGAATGGAGTGGTT 58.822 34.615 7.30 0.00 36.84 3.67
2464 2530 6.725364 AGAATTCTGTAATGAATGGAGTGGT 58.275 36.000 7.30 0.00 36.84 4.16
2465 2531 7.636150 AAGAATTCTGTAATGAATGGAGTGG 57.364 36.000 9.17 0.00 36.84 4.00
2467 2533 9.347240 CCATAAGAATTCTGTAATGAATGGAGT 57.653 33.333 19.72 1.02 36.84 3.85
2468 2534 9.347240 ACCATAAGAATTCTGTAATGAATGGAG 57.653 33.333 19.72 9.65 36.84 3.86
2469 2535 9.123902 CACCATAAGAATTCTGTAATGAATGGA 57.876 33.333 19.72 0.00 36.84 3.41
2470 2536 8.355169 CCACCATAAGAATTCTGTAATGAATGG 58.645 37.037 19.72 19.98 36.84 3.16
2471 2537 8.906867 ACCACCATAAGAATTCTGTAATGAATG 58.093 33.333 19.72 16.98 36.84 2.67
2472 2538 9.479549 AACCACCATAAGAATTCTGTAATGAAT 57.520 29.630 19.72 9.94 38.19 2.57
2473 2539 8.877864 AACCACCATAAGAATTCTGTAATGAA 57.122 30.769 19.72 0.00 0.00 2.57
2474 2540 8.877864 AAACCACCATAAGAATTCTGTAATGA 57.122 30.769 19.72 1.74 0.00 2.57
2477 2543 9.802039 ACTAAAACCACCATAAGAATTCTGTAA 57.198 29.630 9.17 0.00 0.00 2.41
2478 2544 9.802039 AACTAAAACCACCATAAGAATTCTGTA 57.198 29.630 9.17 4.45 0.00 2.74
2479 2545 8.576442 CAACTAAAACCACCATAAGAATTCTGT 58.424 33.333 9.17 0.00 0.00 3.41
2480 2546 8.792633 TCAACTAAAACCACCATAAGAATTCTG 58.207 33.333 9.17 0.00 0.00 3.02
2481 2547 8.934023 TCAACTAAAACCACCATAAGAATTCT 57.066 30.769 0.88 0.88 0.00 2.40
2482 2548 9.626045 CTTCAACTAAAACCACCATAAGAATTC 57.374 33.333 0.00 0.00 0.00 2.17
2483 2549 9.362151 TCTTCAACTAAAACCACCATAAGAATT 57.638 29.630 0.00 0.00 0.00 2.17
2484 2550 8.934023 TCTTCAACTAAAACCACCATAAGAAT 57.066 30.769 0.00 0.00 0.00 2.40
2485 2551 8.754991 TTCTTCAACTAAAACCACCATAAGAA 57.245 30.769 0.00 0.00 0.00 2.52
2486 2552 8.934023 ATTCTTCAACTAAAACCACCATAAGA 57.066 30.769 0.00 0.00 0.00 2.10
2490 2556 8.531146 CCATAATTCTTCAACTAAAACCACCAT 58.469 33.333 0.00 0.00 0.00 3.55
2491 2557 7.726291 TCCATAATTCTTCAACTAAAACCACCA 59.274 33.333 0.00 0.00 0.00 4.17
2492 2558 8.117813 TCCATAATTCTTCAACTAAAACCACC 57.882 34.615 0.00 0.00 0.00 4.61
2493 2559 9.406828 GTTCCATAATTCTTCAACTAAAACCAC 57.593 33.333 0.00 0.00 0.00 4.16
2494 2560 8.293867 CGTTCCATAATTCTTCAACTAAAACCA 58.706 33.333 0.00 0.00 0.00 3.67
2495 2561 7.753580 CCGTTCCATAATTCTTCAACTAAAACC 59.246 37.037 0.00 0.00 0.00 3.27
2496 2562 8.508875 TCCGTTCCATAATTCTTCAACTAAAAC 58.491 33.333 0.00 0.00 0.00 2.43
2497 2563 8.624367 TCCGTTCCATAATTCTTCAACTAAAA 57.376 30.769 0.00 0.00 0.00 1.52
2498 2564 7.335924 CCTCCGTTCCATAATTCTTCAACTAAA 59.664 37.037 0.00 0.00 0.00 1.85
2499 2565 6.821665 CCTCCGTTCCATAATTCTTCAACTAA 59.178 38.462 0.00 0.00 0.00 2.24
2500 2566 6.346096 CCTCCGTTCCATAATTCTTCAACTA 58.654 40.000 0.00 0.00 0.00 2.24
2501 2567 5.186198 CCTCCGTTCCATAATTCTTCAACT 58.814 41.667 0.00 0.00 0.00 3.16
2502 2568 4.335594 CCCTCCGTTCCATAATTCTTCAAC 59.664 45.833 0.00 0.00 0.00 3.18
2503 2569 4.523083 CCCTCCGTTCCATAATTCTTCAA 58.477 43.478 0.00 0.00 0.00 2.69
2504 2570 3.118038 CCCCTCCGTTCCATAATTCTTCA 60.118 47.826 0.00 0.00 0.00 3.02
2505 2571 3.477530 CCCCTCCGTTCCATAATTCTTC 58.522 50.000 0.00 0.00 0.00 2.87
2506 2572 2.174854 CCCCCTCCGTTCCATAATTCTT 59.825 50.000 0.00 0.00 0.00 2.52
2507 2573 1.774856 CCCCCTCCGTTCCATAATTCT 59.225 52.381 0.00 0.00 0.00 2.40
2508 2574 1.493446 ACCCCCTCCGTTCCATAATTC 59.507 52.381 0.00 0.00 0.00 2.17
2509 2575 1.603634 ACCCCCTCCGTTCCATAATT 58.396 50.000 0.00 0.00 0.00 1.40
2510 2576 2.052468 GTACCCCCTCCGTTCCATAAT 58.948 52.381 0.00 0.00 0.00 1.28
2511 2577 1.499368 GTACCCCCTCCGTTCCATAA 58.501 55.000 0.00 0.00 0.00 1.90
2512 2578 0.398948 GGTACCCCCTCCGTTCCATA 60.399 60.000 0.00 0.00 0.00 2.74
2513 2579 1.691689 GGTACCCCCTCCGTTCCAT 60.692 63.158 0.00 0.00 0.00 3.41
2514 2580 2.284847 GGTACCCCCTCCGTTCCA 60.285 66.667 0.00 0.00 0.00 3.53
2515 2581 3.464494 CGGTACCCCCTCCGTTCC 61.464 72.222 6.25 0.00 41.58 3.62
2516 2582 1.543944 TTTCGGTACCCCCTCCGTTC 61.544 60.000 6.25 0.00 45.88 3.95
2517 2583 0.911045 ATTTCGGTACCCCCTCCGTT 60.911 55.000 6.25 0.00 45.88 4.44
2518 2584 0.911045 AATTTCGGTACCCCCTCCGT 60.911 55.000 6.25 0.00 45.88 4.69
2519 2585 0.463116 CAATTTCGGTACCCCCTCCG 60.463 60.000 6.25 0.00 46.93 4.63
2520 2586 0.106868 CCAATTTCGGTACCCCCTCC 60.107 60.000 6.25 0.00 0.00 4.30
2521 2587 0.750546 GCCAATTTCGGTACCCCCTC 60.751 60.000 6.25 0.00 0.00 4.30
2522 2588 1.305287 GCCAATTTCGGTACCCCCT 59.695 57.895 6.25 0.00 0.00 4.79
2523 2589 1.755395 GGCCAATTTCGGTACCCCC 60.755 63.158 6.25 0.00 0.00 5.40
2524 2590 0.323999 AAGGCCAATTTCGGTACCCC 60.324 55.000 5.01 0.00 0.00 4.95
2525 2591 1.203758 CAAAGGCCAATTTCGGTACCC 59.796 52.381 5.01 0.00 0.00 3.69
2526 2592 1.890489 ACAAAGGCCAATTTCGGTACC 59.110 47.619 5.01 0.16 0.00 3.34
2527 2593 3.243602 ACAACAAAGGCCAATTTCGGTAC 60.244 43.478 5.01 0.00 0.00 3.34
2528 2594 2.959707 ACAACAAAGGCCAATTTCGGTA 59.040 40.909 5.01 0.00 0.00 4.02
2529 2595 1.760029 ACAACAAAGGCCAATTTCGGT 59.240 42.857 5.01 0.00 0.00 4.69
2530 2596 2.134346 CACAACAAAGGCCAATTTCGG 58.866 47.619 5.01 0.00 0.00 4.30
2531 2597 3.052036 CTCACAACAAAGGCCAATTTCG 58.948 45.455 5.01 0.00 0.00 3.46
2532 2598 4.301628 CTCTCACAACAAAGGCCAATTTC 58.698 43.478 5.01 0.00 0.00 2.17
2533 2599 3.493176 GCTCTCACAACAAAGGCCAATTT 60.493 43.478 5.01 0.00 0.00 1.82
2534 2600 2.036346 GCTCTCACAACAAAGGCCAATT 59.964 45.455 5.01 0.00 0.00 2.32
2535 2601 1.615392 GCTCTCACAACAAAGGCCAAT 59.385 47.619 5.01 0.00 0.00 3.16
2536 2602 1.032014 GCTCTCACAACAAAGGCCAA 58.968 50.000 5.01 0.00 0.00 4.52
2537 2603 0.183492 AGCTCTCACAACAAAGGCCA 59.817 50.000 5.01 0.00 0.00 5.36
2538 2604 0.595095 CAGCTCTCACAACAAAGGCC 59.405 55.000 0.00 0.00 0.00 5.19
2539 2605 1.534595 CTCAGCTCTCACAACAAAGGC 59.465 52.381 0.00 0.00 0.00 4.35
2540 2606 3.117491 TCTCAGCTCTCACAACAAAGG 57.883 47.619 0.00 0.00 0.00 3.11
2541 2607 4.125703 AGTTCTCAGCTCTCACAACAAAG 58.874 43.478 0.00 0.00 0.00 2.77
2542 2608 4.142609 AGTTCTCAGCTCTCACAACAAA 57.857 40.909 0.00 0.00 0.00 2.83
2543 2609 3.827008 AGTTCTCAGCTCTCACAACAA 57.173 42.857 0.00 0.00 0.00 2.83
2544 2610 3.827008 AAGTTCTCAGCTCTCACAACA 57.173 42.857 0.00 0.00 0.00 3.33
2545 2611 3.873952 ACAAAGTTCTCAGCTCTCACAAC 59.126 43.478 0.00 0.00 0.00 3.32
2546 2612 4.142609 ACAAAGTTCTCAGCTCTCACAA 57.857 40.909 0.00 0.00 0.00 3.33
2547 2613 3.827008 ACAAAGTTCTCAGCTCTCACA 57.173 42.857 0.00 0.00 0.00 3.58
2548 2614 3.873952 ACAACAAAGTTCTCAGCTCTCAC 59.126 43.478 0.00 0.00 0.00 3.51
2549 2615 4.122776 GACAACAAAGTTCTCAGCTCTCA 58.877 43.478 0.00 0.00 0.00 3.27
2550 2616 4.376146 AGACAACAAAGTTCTCAGCTCTC 58.624 43.478 0.00 0.00 0.00 3.20
2551 2617 4.414337 AGACAACAAAGTTCTCAGCTCT 57.586 40.909 0.00 0.00 0.00 4.09
2552 2618 5.269313 CAAAGACAACAAAGTTCTCAGCTC 58.731 41.667 0.00 0.00 0.00 4.09
2553 2619 4.096984 CCAAAGACAACAAAGTTCTCAGCT 59.903 41.667 0.00 0.00 0.00 4.24
2554 2620 4.354587 CCAAAGACAACAAAGTTCTCAGC 58.645 43.478 0.00 0.00 0.00 4.26
2555 2621 4.354587 GCCAAAGACAACAAAGTTCTCAG 58.645 43.478 0.00 0.00 0.00 3.35
2556 2622 3.130340 GGCCAAAGACAACAAAGTTCTCA 59.870 43.478 0.00 0.00 0.00 3.27
2557 2623 3.381590 AGGCCAAAGACAACAAAGTTCTC 59.618 43.478 5.01 0.00 0.00 2.87
2558 2624 3.365472 AGGCCAAAGACAACAAAGTTCT 58.635 40.909 5.01 0.00 0.00 3.01
2559 2625 3.801114 AGGCCAAAGACAACAAAGTTC 57.199 42.857 5.01 0.00 0.00 3.01
2560 2626 3.260632 ACAAGGCCAAAGACAACAAAGTT 59.739 39.130 5.01 0.00 0.00 2.66
2561 2627 2.831526 ACAAGGCCAAAGACAACAAAGT 59.168 40.909 5.01 0.00 0.00 2.66
2562 2628 3.525268 ACAAGGCCAAAGACAACAAAG 57.475 42.857 5.01 0.00 0.00 2.77
2563 2629 5.278758 GCTATACAAGGCCAAAGACAACAAA 60.279 40.000 5.01 0.00 0.00 2.83
2564 2630 4.217550 GCTATACAAGGCCAAAGACAACAA 59.782 41.667 5.01 0.00 0.00 2.83
2565 2631 3.756434 GCTATACAAGGCCAAAGACAACA 59.244 43.478 5.01 0.00 0.00 3.33
2566 2632 4.010349 AGCTATACAAGGCCAAAGACAAC 58.990 43.478 5.01 0.00 0.00 3.32
2567 2633 4.301072 AGCTATACAAGGCCAAAGACAA 57.699 40.909 5.01 0.00 0.00 3.18
2568 2634 4.261801 GAAGCTATACAAGGCCAAAGACA 58.738 43.478 5.01 0.00 0.00 3.41
2569 2635 4.261801 TGAAGCTATACAAGGCCAAAGAC 58.738 43.478 5.01 0.00 0.00 3.01
2570 2636 4.019321 ACTGAAGCTATACAAGGCCAAAGA 60.019 41.667 5.01 0.00 0.00 2.52
2571 2637 4.265073 ACTGAAGCTATACAAGGCCAAAG 58.735 43.478 5.01 0.00 0.00 2.77
2572 2638 4.301072 ACTGAAGCTATACAAGGCCAAA 57.699 40.909 5.01 0.00 0.00 3.28
2573 2639 4.469945 ACTACTGAAGCTATACAAGGCCAA 59.530 41.667 5.01 0.00 0.00 4.52
2574 2640 4.030913 ACTACTGAAGCTATACAAGGCCA 58.969 43.478 5.01 0.00 0.00 5.36
2575 2641 4.674281 ACTACTGAAGCTATACAAGGCC 57.326 45.455 0.00 0.00 0.00 5.19
2576 2642 5.420409 ACAACTACTGAAGCTATACAAGGC 58.580 41.667 0.00 0.00 0.00 4.35
2577 2643 8.414003 TGATACAACTACTGAAGCTATACAAGG 58.586 37.037 0.00 0.00 0.00 3.61
2578 2644 9.239002 GTGATACAACTACTGAAGCTATACAAG 57.761 37.037 0.00 0.00 0.00 3.16
2579 2645 8.195436 GGTGATACAACTACTGAAGCTATACAA 58.805 37.037 0.00 0.00 0.00 2.41
2580 2646 7.340999 TGGTGATACAACTACTGAAGCTATACA 59.659 37.037 0.00 0.00 0.00 2.29
2581 2647 7.713750 TGGTGATACAACTACTGAAGCTATAC 58.286 38.462 0.00 0.00 0.00 1.47
2582 2648 7.560262 ACTGGTGATACAACTACTGAAGCTATA 59.440 37.037 0.00 0.00 0.00 1.31
2583 2649 6.381420 ACTGGTGATACAACTACTGAAGCTAT 59.619 38.462 0.00 0.00 0.00 2.97
2584 2650 5.715279 ACTGGTGATACAACTACTGAAGCTA 59.285 40.000 0.00 0.00 0.00 3.32
2585 2651 4.528596 ACTGGTGATACAACTACTGAAGCT 59.471 41.667 0.00 0.00 0.00 3.74
2586 2652 4.822026 ACTGGTGATACAACTACTGAAGC 58.178 43.478 0.00 0.00 0.00 3.86
2587 2653 7.441157 TCAAAACTGGTGATACAACTACTGAAG 59.559 37.037 0.00 0.00 0.00 3.02
2588 2654 7.276658 TCAAAACTGGTGATACAACTACTGAA 58.723 34.615 0.00 0.00 0.00 3.02
2589 2655 6.822442 TCAAAACTGGTGATACAACTACTGA 58.178 36.000 0.00 0.00 0.00 3.41
2590 2656 7.490962 TTCAAAACTGGTGATACAACTACTG 57.509 36.000 0.00 0.00 0.00 2.74
2591 2657 6.204882 GCTTCAAAACTGGTGATACAACTACT 59.795 38.462 0.00 0.00 0.00 2.57
2592 2658 6.371389 GCTTCAAAACTGGTGATACAACTAC 58.629 40.000 0.00 0.00 0.00 2.73
2593 2659 5.178623 CGCTTCAAAACTGGTGATACAACTA 59.821 40.000 0.00 0.00 0.00 2.24
2594 2660 4.024048 CGCTTCAAAACTGGTGATACAACT 60.024 41.667 0.00 0.00 0.00 3.16
2595 2661 4.219033 CGCTTCAAAACTGGTGATACAAC 58.781 43.478 0.00 0.00 0.00 3.32
2596 2662 3.252215 CCGCTTCAAAACTGGTGATACAA 59.748 43.478 0.00 0.00 0.00 2.41
2597 2663 2.811431 CCGCTTCAAAACTGGTGATACA 59.189 45.455 0.00 0.00 0.00 2.29
2598 2664 2.161609 CCCGCTTCAAAACTGGTGATAC 59.838 50.000 0.00 0.00 0.00 2.24
2599 2665 2.224670 ACCCGCTTCAAAACTGGTGATA 60.225 45.455 0.00 0.00 0.00 2.15
2600 2666 1.247567 CCCGCTTCAAAACTGGTGAT 58.752 50.000 0.00 0.00 0.00 3.06
2601 2667 0.106918 ACCCGCTTCAAAACTGGTGA 60.107 50.000 0.00 0.00 0.00 4.02
2602 2668 0.030638 CACCCGCTTCAAAACTGGTG 59.969 55.000 0.00 0.00 37.51 4.17
2603 2669 1.734388 GCACCCGCTTCAAAACTGGT 61.734 55.000 0.00 0.00 34.30 4.00
2604 2670 1.007387 GCACCCGCTTCAAAACTGG 60.007 57.895 0.00 0.00 34.30 4.00
2605 2671 4.633980 GCACCCGCTTCAAAACTG 57.366 55.556 0.00 0.00 34.30 3.16
2613 2679 8.539073 TATGGTTTCATAACTAGCACCCGCTT 62.539 42.308 0.00 0.00 39.93 4.68
2614 2680 7.146642 TATGGTTTCATAACTAGCACCCGCT 62.147 44.000 0.00 0.00 41.19 5.52
2615 2681 1.669265 GGTTTCATAACTAGCACCCGC 59.331 52.381 0.00 0.00 34.59 6.13
2616 2682 2.980568 TGGTTTCATAACTAGCACCCG 58.019 47.619 0.00 0.00 34.59 5.28
2617 2683 5.473504 CCATATGGTTTCATAACTAGCACCC 59.526 44.000 14.09 0.00 39.10 4.61
2618 2684 6.560253 CCATATGGTTTCATAACTAGCACC 57.440 41.667 14.09 0.00 39.10 5.01
2634 2700 1.134699 ACGAGCACTGTCACCATATGG 60.135 52.381 20.68 20.68 42.17 2.74
2635 2701 1.929169 CACGAGCACTGTCACCATATG 59.071 52.381 0.00 0.00 0.00 1.78
2636 2702 1.134699 CCACGAGCACTGTCACCATAT 60.135 52.381 0.00 0.00 0.00 1.78
2637 2703 0.246360 CCACGAGCACTGTCACCATA 59.754 55.000 0.00 0.00 0.00 2.74
2638 2704 1.004560 CCACGAGCACTGTCACCAT 60.005 57.895 0.00 0.00 0.00 3.55
2639 2705 2.421314 CCACGAGCACTGTCACCA 59.579 61.111 0.00 0.00 0.00 4.17
2640 2706 2.357517 CCCACGAGCACTGTCACC 60.358 66.667 0.00 0.00 0.00 4.02
2641 2707 1.956170 CACCCACGAGCACTGTCAC 60.956 63.158 0.00 0.00 0.00 3.67
2642 2708 2.421314 CACCCACGAGCACTGTCA 59.579 61.111 0.00 0.00 0.00 3.58
2643 2709 3.044305 GCACCCACGAGCACTGTC 61.044 66.667 0.00 0.00 0.00 3.51
2644 2710 4.969196 CGCACCCACGAGCACTGT 62.969 66.667 0.00 0.00 34.06 3.55
2645 2711 4.969196 ACGCACCCACGAGCACTG 62.969 66.667 0.00 0.00 36.70 3.66
2646 2712 4.969196 CACGCACCCACGAGCACT 62.969 66.667 0.00 0.00 36.70 4.40
2650 2716 3.991051 AGACCACGCACCCACGAG 61.991 66.667 0.00 0.00 36.70 4.18
2651 2717 4.293648 CAGACCACGCACCCACGA 62.294 66.667 0.00 0.00 36.70 4.35
2653 2719 4.626081 AGCAGACCACGCACCCAC 62.626 66.667 0.00 0.00 0.00 4.61
2654 2720 4.624364 CAGCAGACCACGCACCCA 62.624 66.667 0.00 0.00 0.00 4.51
2656 2722 4.626081 ACCAGCAGACCACGCACC 62.626 66.667 0.00 0.00 0.00 5.01
2657 2723 3.349006 CACCAGCAGACCACGCAC 61.349 66.667 0.00 0.00 0.00 5.34
2658 2724 3.399105 AACACCAGCAGACCACGCA 62.399 57.895 0.00 0.00 0.00 5.24
2659 2725 2.591715 AACACCAGCAGACCACGC 60.592 61.111 0.00 0.00 0.00 5.34
2660 2726 2.253758 CCAACACCAGCAGACCACG 61.254 63.158 0.00 0.00 0.00 4.94
2661 2727 1.152963 ACCAACACCAGCAGACCAC 60.153 57.895 0.00 0.00 0.00 4.16
2662 2728 1.148273 GACCAACACCAGCAGACCA 59.852 57.895 0.00 0.00 0.00 4.02
2663 2729 0.685097 TAGACCAACACCAGCAGACC 59.315 55.000 0.00 0.00 0.00 3.85
2664 2730 1.344763 AGTAGACCAACACCAGCAGAC 59.655 52.381 0.00 0.00 0.00 3.51
2665 2731 1.618837 GAGTAGACCAACACCAGCAGA 59.381 52.381 0.00 0.00 0.00 4.26
2666 2732 1.620819 AGAGTAGACCAACACCAGCAG 59.379 52.381 0.00 0.00 0.00 4.24
2667 2733 1.717032 AGAGTAGACCAACACCAGCA 58.283 50.000 0.00 0.00 0.00 4.41
2668 2734 2.841442 AAGAGTAGACCAACACCAGC 57.159 50.000 0.00 0.00 0.00 4.85
2669 2735 4.273480 CACAAAAGAGTAGACCAACACCAG 59.727 45.833 0.00 0.00 0.00 4.00
2670 2736 4.196193 CACAAAAGAGTAGACCAACACCA 58.804 43.478 0.00 0.00 0.00 4.17
2671 2737 4.035208 CACACAAAAGAGTAGACCAACACC 59.965 45.833 0.00 0.00 0.00 4.16
2672 2738 4.634443 ACACACAAAAGAGTAGACCAACAC 59.366 41.667 0.00 0.00 0.00 3.32
2673 2739 4.839121 ACACACAAAAGAGTAGACCAACA 58.161 39.130 0.00 0.00 0.00 3.33
2674 2740 6.314400 TGTTACACACAAAAGAGTAGACCAAC 59.686 38.462 0.00 0.00 29.87 3.77
2675 2741 6.408035 TGTTACACACAAAAGAGTAGACCAA 58.592 36.000 0.00 0.00 29.87 3.67
2676 2742 5.979993 TGTTACACACAAAAGAGTAGACCA 58.020 37.500 0.00 0.00 29.87 4.02
2677 2743 6.147328 GGATGTTACACACAAAAGAGTAGACC 59.853 42.308 0.00 0.00 39.50 3.85
2678 2744 6.147328 GGGATGTTACACACAAAAGAGTAGAC 59.853 42.308 0.00 0.00 39.50 2.59
2679 2745 6.183361 TGGGATGTTACACACAAAAGAGTAGA 60.183 38.462 0.00 0.00 39.50 2.59
2680 2746 5.995282 TGGGATGTTACACACAAAAGAGTAG 59.005 40.000 0.00 0.00 39.50 2.57
2681 2747 5.931294 TGGGATGTTACACACAAAAGAGTA 58.069 37.500 0.00 0.00 39.50 2.59
2682 2748 4.787551 TGGGATGTTACACACAAAAGAGT 58.212 39.130 0.00 0.00 39.50 3.24
2683 2749 5.766150 TTGGGATGTTACACACAAAAGAG 57.234 39.130 0.00 0.00 39.50 2.85
2684 2750 6.531503 TTTTGGGATGTTACACACAAAAGA 57.468 33.333 17.41 4.51 39.50 2.52
2685 2751 7.710475 AGAATTTTGGGATGTTACACACAAAAG 59.290 33.333 22.09 0.00 39.50 2.27
2686 2752 7.560368 AGAATTTTGGGATGTTACACACAAAA 58.440 30.769 20.91 20.91 39.50 2.44
2687 2753 7.118496 AGAATTTTGGGATGTTACACACAAA 57.882 32.000 9.89 9.89 39.50 2.83
2688 2754 6.723298 AGAATTTTGGGATGTTACACACAA 57.277 33.333 0.00 0.00 39.50 3.33
2689 2755 7.825331 TTAGAATTTTGGGATGTTACACACA 57.175 32.000 0.00 0.00 40.71 3.72
2690 2756 9.705290 AATTTAGAATTTTGGGATGTTACACAC 57.295 29.630 0.00 0.00 0.00 3.82
2695 2761 9.784531 TGCAAAATTTAGAATTTTGGGATGTTA 57.215 25.926 26.98 5.84 44.65 2.41
2696 2762 8.688747 TGCAAAATTTAGAATTTTGGGATGTT 57.311 26.923 26.98 0.94 44.65 2.71
2697 2763 8.688747 TTGCAAAATTTAGAATTTTGGGATGT 57.311 26.923 26.98 1.50 44.65 3.06
2698 2764 9.562583 CATTGCAAAATTTAGAATTTTGGGATG 57.437 29.630 26.98 12.54 44.65 3.51
2699 2765 9.299465 ACATTGCAAAATTTAGAATTTTGGGAT 57.701 25.926 26.98 2.61 44.65 3.85
2700 2766 8.688747 ACATTGCAAAATTTAGAATTTTGGGA 57.311 26.923 26.98 14.49 44.65 4.37
2741 2807 9.458727 ACTCAGTTTCTGTCAATCAATCATATT 57.541 29.630 0.00 0.00 32.61 1.28
2742 2808 8.890718 CACTCAGTTTCTGTCAATCAATCATAT 58.109 33.333 0.00 0.00 32.61 1.78
2743 2809 8.096414 TCACTCAGTTTCTGTCAATCAATCATA 58.904 33.333 0.00 0.00 32.61 2.15
2744 2810 6.938596 TCACTCAGTTTCTGTCAATCAATCAT 59.061 34.615 0.00 0.00 32.61 2.45
2745 2811 6.290605 TCACTCAGTTTCTGTCAATCAATCA 58.709 36.000 0.00 0.00 32.61 2.57
2746 2812 6.791887 TCACTCAGTTTCTGTCAATCAATC 57.208 37.500 0.00 0.00 32.61 2.67
2747 2813 7.572523 TTTCACTCAGTTTCTGTCAATCAAT 57.427 32.000 0.00 0.00 32.61 2.57
2748 2814 7.572523 ATTTCACTCAGTTTCTGTCAATCAA 57.427 32.000 0.00 0.00 32.61 2.57
2749 2815 7.572523 AATTTCACTCAGTTTCTGTCAATCA 57.427 32.000 0.00 0.00 32.61 2.57
2750 2816 7.917505 ACAAATTTCACTCAGTTTCTGTCAATC 59.082 33.333 0.00 0.00 32.61 2.67
2751 2817 7.775120 ACAAATTTCACTCAGTTTCTGTCAAT 58.225 30.769 0.00 0.00 32.61 2.57
2752 2818 7.156876 ACAAATTTCACTCAGTTTCTGTCAA 57.843 32.000 0.00 0.00 32.61 3.18
2753 2819 6.757897 ACAAATTTCACTCAGTTTCTGTCA 57.242 33.333 0.00 0.00 32.61 3.58
2754 2820 8.466086 AAAACAAATTTCACTCAGTTTCTGTC 57.534 30.769 3.42 0.00 32.61 3.51
2755 2821 8.831715 AAAAACAAATTTCACTCAGTTTCTGT 57.168 26.923 3.42 0.00 32.61 3.41
2780 2846 4.162812 GCCGCGATCATTCAACTTAAAAA 58.837 39.130 8.23 0.00 0.00 1.94
2781 2847 3.426963 GGCCGCGATCATTCAACTTAAAA 60.427 43.478 8.23 0.00 0.00 1.52
2782 2848 2.096819 GGCCGCGATCATTCAACTTAAA 59.903 45.455 8.23 0.00 0.00 1.52
2783 2849 1.668751 GGCCGCGATCATTCAACTTAA 59.331 47.619 8.23 0.00 0.00 1.85
2784 2850 1.295792 GGCCGCGATCATTCAACTTA 58.704 50.000 8.23 0.00 0.00 2.24
2785 2851 1.705337 CGGCCGCGATCATTCAACTT 61.705 55.000 14.67 0.00 0.00 2.66
2786 2852 2.173669 CGGCCGCGATCATTCAACT 61.174 57.895 14.67 0.00 0.00 3.16
2787 2853 2.324477 CGGCCGCGATCATTCAAC 59.676 61.111 14.67 0.00 0.00 3.18
2788 2854 2.125310 ACGGCCGCGATCATTCAA 60.125 55.556 28.58 0.00 0.00 2.69
2789 2855 2.584970 GACGGCCGCGATCATTCA 60.585 61.111 28.58 0.00 0.00 2.57
2790 2856 3.692367 CGACGGCCGCGATCATTC 61.692 66.667 29.59 16.31 0.00 2.67
2802 2868 4.351938 TCCAGCGTTGTCCGACGG 62.352 66.667 7.84 7.84 42.98 4.79
2803 2869 2.805353 CTCCAGCGTTGTCCGACG 60.805 66.667 2.69 2.69 45.40 5.12
2804 2870 3.112709 GCTCCAGCGTTGTCCGAC 61.113 66.667 0.00 0.00 39.56 4.79
2805 2871 4.373116 GGCTCCAGCGTTGTCCGA 62.373 66.667 0.00 0.00 43.26 4.55
2807 2873 3.959991 GAGGGCTCCAGCGTTGTCC 62.960 68.421 0.00 0.00 43.26 4.02
2808 2874 2.435059 GAGGGCTCCAGCGTTGTC 60.435 66.667 0.00 0.00 43.26 3.18
2821 2887 3.006728 TTACAGCGGTGGGGAGGG 61.007 66.667 20.20 0.00 0.00 4.30
2822 2888 2.584608 CTTACAGCGGTGGGGAGG 59.415 66.667 20.20 0.33 0.00 4.30
2823 2889 2.125106 GCTTACAGCGGTGGGGAG 60.125 66.667 20.20 13.71 0.00 4.30
2824 2890 3.712907 GGCTTACAGCGGTGGGGA 61.713 66.667 20.20 0.37 43.62 4.81
2825 2891 4.028490 TGGCTTACAGCGGTGGGG 62.028 66.667 20.20 9.25 43.62 4.96
2826 2892 2.746277 GTGGCTTACAGCGGTGGG 60.746 66.667 20.20 9.61 43.62 4.61
2827 2893 2.746277 GGTGGCTTACAGCGGTGG 60.746 66.667 20.20 1.98 43.62 4.61
2832 2898 3.488090 GCGTCGGTGGCTTACAGC 61.488 66.667 0.00 0.00 44.02 4.40
2833 2899 2.813908 GGCGTCGGTGGCTTACAG 60.814 66.667 0.00 0.00 0.00 2.74
2834 2900 4.382320 GGGCGTCGGTGGCTTACA 62.382 66.667 0.00 0.00 34.31 2.41
2835 2901 4.078516 AGGGCGTCGGTGGCTTAC 62.079 66.667 0.00 0.00 34.31 2.34
2836 2902 3.766691 GAGGGCGTCGGTGGCTTA 61.767 66.667 0.00 0.00 34.31 3.09
2840 2906 4.452733 GAAGGAGGGCGTCGGTGG 62.453 72.222 0.53 0.00 0.00 4.61
2841 2907 3.691342 TGAAGGAGGGCGTCGGTG 61.691 66.667 0.53 0.00 0.00 4.94
2842 2908 2.776370 TAGTGAAGGAGGGCGTCGGT 62.776 60.000 0.53 0.00 0.00 4.69
2843 2909 1.392710 ATAGTGAAGGAGGGCGTCGG 61.393 60.000 0.53 0.00 0.00 4.79
2844 2910 0.460311 AATAGTGAAGGAGGGCGTCG 59.540 55.000 0.53 0.00 0.00 5.12
2845 2911 3.814005 TTAATAGTGAAGGAGGGCGTC 57.186 47.619 0.00 0.00 0.00 5.19
2846 2912 4.409247 AGATTTAATAGTGAAGGAGGGCGT 59.591 41.667 0.00 0.00 0.00 5.68
2847 2913 4.752101 CAGATTTAATAGTGAAGGAGGGCG 59.248 45.833 0.00 0.00 0.00 6.13
2848 2914 4.517075 GCAGATTTAATAGTGAAGGAGGGC 59.483 45.833 0.00 0.00 0.00 5.19
2849 2915 5.684704 TGCAGATTTAATAGTGAAGGAGGG 58.315 41.667 0.00 0.00 0.00 4.30
2850 2916 6.238211 CGTTGCAGATTTAATAGTGAAGGAGG 60.238 42.308 0.00 0.00 0.00 4.30
2851 2917 6.313905 ACGTTGCAGATTTAATAGTGAAGGAG 59.686 38.462 0.00 0.00 0.00 3.69
2852 2918 6.170506 ACGTTGCAGATTTAATAGTGAAGGA 58.829 36.000 0.00 0.00 0.00 3.36
2853 2919 6.422776 ACGTTGCAGATTTAATAGTGAAGG 57.577 37.500 0.00 0.00 0.00 3.46
2854 2920 7.008901 TCGTACGTTGCAGATTTAATAGTGAAG 59.991 37.037 16.05 0.00 0.00 3.02
2855 2921 6.807720 TCGTACGTTGCAGATTTAATAGTGAA 59.192 34.615 16.05 0.00 0.00 3.18
2856 2922 6.252015 GTCGTACGTTGCAGATTTAATAGTGA 59.748 38.462 16.05 0.00 0.00 3.41
2857 2923 6.400422 GTCGTACGTTGCAGATTTAATAGTG 58.600 40.000 16.05 0.00 0.00 2.74
2858 2924 5.228635 CGTCGTACGTTGCAGATTTAATAGT 59.771 40.000 16.05 0.00 36.74 2.12
2859 2925 5.453266 TCGTCGTACGTTGCAGATTTAATAG 59.547 40.000 16.05 0.00 43.14 1.73
2860 2926 5.331098 TCGTCGTACGTTGCAGATTTAATA 58.669 37.500 16.05 0.00 43.14 0.98
2861 2927 4.168014 TCGTCGTACGTTGCAGATTTAAT 58.832 39.130 16.05 0.00 43.14 1.40
2862 2928 3.563508 TCGTCGTACGTTGCAGATTTAA 58.436 40.909 16.05 0.00 43.14 1.52
2863 2929 3.200294 TCGTCGTACGTTGCAGATTTA 57.800 42.857 16.05 0.00 43.14 1.40
2864 2930 2.054687 TCGTCGTACGTTGCAGATTT 57.945 45.000 16.05 0.00 43.14 2.17
2865 2931 2.273370 ATCGTCGTACGTTGCAGATT 57.727 45.000 16.05 0.00 43.14 2.40
2866 2932 2.273370 AATCGTCGTACGTTGCAGAT 57.727 45.000 16.05 10.72 43.14 2.90
2867 2933 2.476686 CCTAATCGTCGTACGTTGCAGA 60.477 50.000 16.05 8.94 43.14 4.26
2868 2934 1.844357 CCTAATCGTCGTACGTTGCAG 59.156 52.381 16.05 6.31 43.14 4.41
2869 2935 1.199789 ACCTAATCGTCGTACGTTGCA 59.800 47.619 16.05 0.00 43.14 4.08
2870 2936 1.842546 GACCTAATCGTCGTACGTTGC 59.157 52.381 16.05 6.20 43.14 4.17
2871 2937 3.121559 TGACCTAATCGTCGTACGTTG 57.878 47.619 16.05 9.09 43.14 4.10
2872 2938 3.945179 GATGACCTAATCGTCGTACGTT 58.055 45.455 16.05 4.57 43.14 3.99
2873 2939 3.599046 GATGACCTAATCGTCGTACGT 57.401 47.619 16.05 0.00 43.14 3.57
2886 2952 8.974408 GTGCTTTTAAAATAAAAACGATGACCT 58.026 29.630 0.09 0.00 0.00 3.85
2887 2953 7.942538 CGTGCTTTTAAAATAAAAACGATGACC 59.057 33.333 0.09 0.00 32.90 4.02
2888 2954 8.683774 TCGTGCTTTTAAAATAAAAACGATGAC 58.316 29.630 13.95 0.00 34.22 3.06
2889 2955 8.783999 TCGTGCTTTTAAAATAAAAACGATGA 57.216 26.923 13.95 3.83 34.22 2.92
2892 2958 8.411182 CGATTCGTGCTTTTAAAATAAAAACGA 58.589 29.630 13.95 13.95 35.83 3.85
2893 2959 8.202697 ACGATTCGTGCTTTTAAAATAAAAACG 58.797 29.630 11.56 11.00 39.18 3.60
2894 2960 9.838163 AACGATTCGTGCTTTTAAAATAAAAAC 57.162 25.926 13.22 0.00 39.99 2.43
2898 2964 9.453325 AGAAAACGATTCGTGCTTTTAAAATAA 57.547 25.926 13.22 0.00 39.99 1.40
2900 2966 7.924103 AGAAAACGATTCGTGCTTTTAAAAT 57.076 28.000 13.22 0.00 39.99 1.82
2901 2967 8.124199 AGTAGAAAACGATTCGTGCTTTTAAAA 58.876 29.630 13.22 0.00 39.99 1.52
2902 2968 7.632721 AGTAGAAAACGATTCGTGCTTTTAAA 58.367 30.769 13.22 0.00 39.99 1.52
2903 2969 7.181143 AGTAGAAAACGATTCGTGCTTTTAA 57.819 32.000 13.22 0.90 39.99 1.52
2904 2970 6.774354 AGTAGAAAACGATTCGTGCTTTTA 57.226 33.333 13.22 6.48 39.99 1.52
2905 2971 5.668558 AGTAGAAAACGATTCGTGCTTTT 57.331 34.783 13.22 9.62 39.99 2.27
2906 2972 6.963049 ATAGTAGAAAACGATTCGTGCTTT 57.037 33.333 13.22 10.35 39.99 3.51
2907 2973 8.644318 AATATAGTAGAAAACGATTCGTGCTT 57.356 30.769 13.22 9.33 39.99 3.91
2908 2974 8.644318 AAATATAGTAGAAAACGATTCGTGCT 57.356 30.769 13.22 12.58 39.99 4.40
2909 2975 7.730450 CGAAATATAGTAGAAAACGATTCGTGC 59.270 37.037 13.22 5.73 39.99 5.34
2910 2976 8.205948 CCGAAATATAGTAGAAAACGATTCGTG 58.794 37.037 13.22 0.00 39.99 4.35
2911 2977 7.096312 GCCGAAATATAGTAGAAAACGATTCGT 60.096 37.037 5.75 5.75 43.97 3.85
2912 2978 7.218560 GCCGAAATATAGTAGAAAACGATTCG 58.781 38.462 4.14 4.14 0.00 3.34
2913 2979 7.508134 GGCCGAAATATAGTAGAAAACGATTC 58.492 38.462 0.00 0.00 0.00 2.52
2914 2980 6.145048 CGGCCGAAATATAGTAGAAAACGATT 59.855 38.462 24.07 0.00 0.00 3.34
2915 2981 5.632347 CGGCCGAAATATAGTAGAAAACGAT 59.368 40.000 24.07 0.00 0.00 3.73
2916 2982 4.977963 CGGCCGAAATATAGTAGAAAACGA 59.022 41.667 24.07 0.00 0.00 3.85
2917 2983 4.741676 ACGGCCGAAATATAGTAGAAAACG 59.258 41.667 35.90 0.00 0.00 3.60
2918 2984 5.176406 GGACGGCCGAAATATAGTAGAAAAC 59.824 44.000 35.90 0.00 0.00 2.43
2919 2985 5.291971 GGACGGCCGAAATATAGTAGAAAA 58.708 41.667 35.90 0.00 0.00 2.29
2920 2986 4.874970 GGACGGCCGAAATATAGTAGAAA 58.125 43.478 35.90 0.00 0.00 2.52
2921 2987 4.510038 GGACGGCCGAAATATAGTAGAA 57.490 45.455 35.90 0.00 0.00 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.