Multiple sequence alignment - TraesCS2B01G224900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G224900 chr2B 100.000 5142 0 0 1 5142 214584722 214589863 0.000000e+00 9496.0
1 TraesCS2B01G224900 chr2B 84.868 152 17 2 3973 4124 516168711 516168566 1.150000e-31 148.0
2 TraesCS2B01G224900 chr2B 82.857 140 20 3 4761 4898 610018543 610018680 6.990000e-24 122.0
3 TraesCS2B01G224900 chr2B 100.000 30 0 0 4596 4625 16991504 16991533 7.190000e-04 56.5
4 TraesCS2B01G224900 chr2A 94.200 2845 93 34 1595 4416 166847340 166850135 0.000000e+00 4274.0
5 TraesCS2B01G224900 chr2A 96.847 666 19 2 899 1562 166846528 166847193 0.000000e+00 1112.0
6 TraesCS2B01G224900 chr2A 84.316 848 67 28 1 837 166845632 166846424 0.000000e+00 769.0
7 TraesCS2B01G224900 chr2A 96.226 106 3 1 1492 1596 166847186 166847291 6.850000e-39 172.0
8 TraesCS2B01G224900 chr2A 97.500 40 1 0 855 894 166846424 166846463 9.240000e-08 69.4
9 TraesCS2B01G224900 chr2D 94.293 2278 85 19 2280 4536 157131636 157133889 0.000000e+00 3445.0
10 TraesCS2B01G224900 chr2D 96.853 699 19 2 899 1596 157130256 157130952 0.000000e+00 1166.0
11 TraesCS2B01G224900 chr2D 93.039 589 21 9 1595 2172 157131001 157131580 0.000000e+00 843.0
12 TraesCS2B01G224900 chr2D 88.676 574 44 12 330 894 157129630 157130191 0.000000e+00 680.0
13 TraesCS2B01G224900 chr2D 91.192 193 15 2 3 194 157129324 157129515 1.420000e-65 261.0
14 TraesCS2B01G224900 chr2D 83.270 263 36 5 4633 4890 639091292 639091551 8.610000e-58 235.0
15 TraesCS2B01G224900 chr2D 91.892 148 6 6 4620 4763 157134083 157133938 8.730000e-48 202.0
16 TraesCS2B01G224900 chr2D 94.949 99 5 0 4914 5012 595120069 595119971 6.890000e-34 156.0
17 TraesCS2B01G224900 chr2D 91.964 112 5 4 4903 5012 33932324 33932433 2.480000e-33 154.0
18 TraesCS2B01G224900 chr2D 94.949 99 3 2 4914 5012 630264522 630264426 2.480000e-33 154.0
19 TraesCS2B01G224900 chr2D 83.688 141 20 3 4761 4900 121293472 121293610 4.180000e-26 130.0
20 TraesCS2B01G224900 chr2D 89.831 59 1 3 2200 2255 157131575 157131631 2.570000e-08 71.3
21 TraesCS2B01G224900 chr4D 85.220 2138 218 52 2235 4332 387811894 387809815 0.000000e+00 2108.0
22 TraesCS2B01G224900 chr4D 82.645 121 16 4 2080 2197 387812263 387812145 9.110000e-18 102.0
23 TraesCS2B01G224900 chr4B 85.947 1964 193 39 2229 4151 476187038 476185117 0.000000e+00 2021.0
24 TraesCS2B01G224900 chr4B 77.152 639 80 40 1606 2197 476187655 476187036 1.390000e-80 311.0
25 TraesCS2B01G224900 chr4B 78.041 296 36 10 3843 4124 410560592 410560312 5.330000e-35 159.0
26 TraesCS2B01G224900 chr4A 85.897 1489 145 35 2229 3688 69268540 69267088 0.000000e+00 1526.0
27 TraesCS2B01G224900 chr4A 85.804 479 41 6 3687 4151 69266927 69266462 2.780000e-132 483.0
28 TraesCS2B01G224900 chr6B 78.931 318 46 17 4596 4900 631848071 631847762 4.060000e-46 196.0
29 TraesCS2B01G224900 chr3A 82.353 187 30 3 547 731 359663005 359662820 5.330000e-35 159.0
30 TraesCS2B01G224900 chr3D 94.949 99 3 2 4914 5012 24163307 24163211 2.480000e-33 154.0
31 TraesCS2B01G224900 chr3D 81.283 187 32 3 547 731 279199729 279199914 1.150000e-31 148.0
32 TraesCS2B01G224900 chr3D 85.000 140 18 3 4761 4899 589730349 589730486 6.940000e-29 139.0
33 TraesCS2B01G224900 chrUn 91.892 111 5 4 4903 5011 406225152 406225260 8.920000e-33 152.0
34 TraesCS2B01G224900 chr1D 91.818 110 5 4 4903 5010 180363653 180363760 3.210000e-32 150.0
35 TraesCS2B01G224900 chr1D 91.818 110 5 4 4903 5010 180364164 180364271 3.210000e-32 150.0
36 TraesCS2B01G224900 chr1D 91.818 110 5 4 4903 5010 180364675 180364782 3.210000e-32 150.0
37 TraesCS2B01G224900 chr1D 95.455 66 3 0 619 684 389215243 389215308 7.040000e-19 106.0
38 TraesCS2B01G224900 chr1D 81.553 103 15 4 4633 4734 46455301 46455202 1.190000e-11 82.4
39 TraesCS2B01G224900 chr7D 93.939 99 4 2 4903 4999 326856821 326856919 1.150000e-31 148.0
40 TraesCS2B01G224900 chr7D 76.471 153 31 4 4586 4736 634836605 634836754 1.540000e-10 78.7
41 TraesCS2B01G224900 chr6A 84.892 139 18 3 4761 4898 597048906 597049042 2.500000e-28 137.0
42 TraesCS2B01G224900 chr6A 80.220 182 29 6 541 716 540621526 540621706 4.180000e-26 130.0
43 TraesCS2B01G224900 chr6A 83.688 141 16 6 4761 4898 163201257 163201121 5.410000e-25 126.0
44 TraesCS2B01G224900 chr6A 91.803 61 4 1 4704 4764 447636111 447636052 3.300000e-12 84.2
45 TraesCS2B01G224900 chr1A 84.173 139 19 3 4761 4898 345794354 345794218 1.160000e-26 132.0
46 TraesCS2B01G224900 chr1B 85.484 124 16 2 4775 4897 684728854 684728976 1.500000e-25 128.0
47 TraesCS2B01G224900 chr6D 77.143 210 30 11 528 732 394622593 394622789 7.040000e-19 106.0
48 TraesCS2B01G224900 chr5A 77.711 166 31 6 4586 4748 597672278 597672116 4.240000e-16 97.1
49 TraesCS2B01G224900 chr7A 100.000 30 0 0 4596 4625 204188894 204188865 7.190000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G224900 chr2B 214584722 214589863 5141 False 9496.000000 9496 100.0000 1 5142 1 chr2B.!!$F2 5141
1 TraesCS2B01G224900 chr2A 166845632 166850135 4503 False 1279.280000 4274 93.8178 1 4416 5 chr2A.!!$F1 4415
2 TraesCS2B01G224900 chr2D 157129324 157133889 4565 False 1077.716667 3445 92.3140 3 4536 6 chr2D.!!$F4 4533
3 TraesCS2B01G224900 chr4D 387809815 387812263 2448 True 1105.000000 2108 83.9325 2080 4332 2 chr4D.!!$R1 2252
4 TraesCS2B01G224900 chr4B 476185117 476187655 2538 True 1166.000000 2021 81.5495 1606 4151 2 chr4B.!!$R2 2545
5 TraesCS2B01G224900 chr4A 69266462 69268540 2078 True 1004.500000 1526 85.8505 2229 4151 2 chr4A.!!$R1 1922

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
308 337 0.035534 TCCATAATGTGCACCGTGCT 60.036 50.0 23.52 6.64 45.31 4.40 F
1088 1187 0.039180 TCGTAGCCTCTTCCACCTCA 59.961 55.0 0.00 0.00 0.00 3.86 F
1236 1335 0.613012 ACTTGGAGCCTGAAATGCCC 60.613 55.0 0.00 0.00 0.00 5.36 F
1301 1400 0.678395 CGATATGGTCTGAGCAGCCT 59.322 55.0 15.33 1.33 0.00 4.58 F
1410 1509 0.768221 TTGGAAGGAGAGGTGCAGGT 60.768 55.0 0.00 0.00 0.00 4.00 F
2274 2760 1.092348 GATTTACCCCTTGGCGTGAC 58.908 55.0 0.00 0.00 33.59 3.67 F
3559 4078 0.912486 ACCCCTCCTTACATGCTCAC 59.088 55.0 0.00 0.00 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2254 2740 0.391927 TCACGCCAAGGGGTAAATCG 60.392 55.000 8.59 0.0 39.30 3.34 R
2399 2888 0.548510 CCTTCCATTCTCACTCCCCC 59.451 60.000 0.00 0.0 0.00 5.40 R
3103 3599 2.057137 AATGCACCAGTGTGTTCAGT 57.943 45.000 0.00 0.0 44.65 3.41 R
3237 3736 3.015327 ACCTGATTCAGCAGCTTTCATC 58.985 45.455 8.23 0.0 34.56 2.92 R
3350 3849 7.335171 GCCTCCATCAAATTTTAGAAAAAGCAT 59.665 33.333 0.00 0.0 0.00 3.79 R
3989 4687 0.832135 TCTTGAACCGAGGCAGAGGT 60.832 55.000 0.00 0.0 43.68 3.85 R
4598 5313 0.035820 AACAACGTGCGGGGTATCAT 60.036 50.000 0.00 0.0 0.00 2.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 0.108615 GAGTAGCTGCTGCCTTTCGA 60.109 55.000 9.82 0.00 40.80 3.71
40 41 0.539051 AGTAGCTGCTGCCTTTCGAT 59.461 50.000 13.43 0.00 40.80 3.59
43 44 2.042831 GCTGCTGCCTTTCGATGGT 61.043 57.895 3.85 0.00 0.00 3.55
80 81 0.602905 GTTGTTAGCCTGACGCCTGT 60.603 55.000 0.00 0.00 38.78 4.00
81 82 0.970640 TTGTTAGCCTGACGCCTGTA 59.029 50.000 0.00 0.00 38.78 2.74
90 91 0.687920 TGACGCCTGTATTGTTGGGA 59.312 50.000 0.00 0.00 0.00 4.37
104 105 2.238521 GTTGGGATTTGAGCACTTCCA 58.761 47.619 0.00 0.00 0.00 3.53
137 139 1.801771 CTGGTGAATTACGTTTGGCGA 59.198 47.619 0.00 0.00 44.77 5.54
170 174 3.244387 TGGGATGAATTCGTCTGACAACA 60.244 43.478 23.52 12.26 32.61 3.33
171 175 3.941483 GGGATGAATTCGTCTGACAACAT 59.059 43.478 23.52 5.46 32.61 2.71
172 176 4.396166 GGGATGAATTCGTCTGACAACATT 59.604 41.667 23.52 2.53 32.61 2.71
204 208 3.189287 AGAAGTTGATGCAATGTTCCGTC 59.811 43.478 0.00 0.00 0.00 4.79
211 215 2.020720 TGCAATGTTCCGTCACAAACT 58.979 42.857 0.00 0.00 0.00 2.66
220 249 2.225491 TCCGTCACAAACTAAATGCTGC 59.775 45.455 0.00 0.00 0.00 5.25
228 257 6.878923 TCACAAACTAAATGCTGCAGTATACT 59.121 34.615 18.16 10.67 0.00 2.12
229 258 8.038351 TCACAAACTAAATGCTGCAGTATACTA 58.962 33.333 18.16 11.22 0.00 1.82
230 259 8.331022 CACAAACTAAATGCTGCAGTATACTAG 58.669 37.037 18.16 20.58 0.00 2.57
231 260 8.041323 ACAAACTAAATGCTGCAGTATACTAGT 58.959 33.333 22.88 22.88 0.00 2.57
232 261 9.529325 CAAACTAAATGCTGCAGTATACTAGTA 57.471 33.333 26.01 4.77 0.00 1.82
238 267 9.698309 AAATGCTGCAGTATACTAGTATTGTAG 57.302 33.333 20.21 20.15 0.00 2.74
240 269 8.913487 TGCTGCAGTATACTAGTATTGTAGTA 57.087 34.615 22.87 19.04 39.33 1.82
241 270 9.516546 TGCTGCAGTATACTAGTATTGTAGTAT 57.483 33.333 22.87 8.27 44.74 2.12
245 274 9.985318 GCAGTATACTAGTATTGTAGTATTCCG 57.015 37.037 20.21 0.00 41.51 4.30
247 276 9.678260 AGTATACTAGTATTGTAGTATTCCGGG 57.322 37.037 20.21 0.00 41.51 5.73
248 277 9.454859 GTATACTAGTATTGTAGTATTCCGGGT 57.545 37.037 20.21 0.00 41.51 5.28
249 278 6.890979 ACTAGTATTGTAGTATTCCGGGTC 57.109 41.667 0.00 0.00 31.14 4.46
250 279 5.772169 ACTAGTATTGTAGTATTCCGGGTCC 59.228 44.000 0.00 0.00 31.14 4.46
251 280 4.812653 AGTATTGTAGTATTCCGGGTCCT 58.187 43.478 0.00 0.00 0.00 3.85
252 281 4.831710 AGTATTGTAGTATTCCGGGTCCTC 59.168 45.833 0.00 0.00 0.00 3.71
253 282 2.077687 TGTAGTATTCCGGGTCCTCC 57.922 55.000 0.00 0.00 0.00 4.30
254 283 1.288633 TGTAGTATTCCGGGTCCTCCA 59.711 52.381 0.00 0.00 34.36 3.86
255 284 2.090943 TGTAGTATTCCGGGTCCTCCAT 60.091 50.000 0.00 0.00 34.36 3.41
256 285 1.424638 AGTATTCCGGGTCCTCCATG 58.575 55.000 0.00 0.00 34.36 3.66
262 291 1.121407 CCGGGTCCTCCATGCTGATA 61.121 60.000 0.00 0.00 34.36 2.15
269 298 3.047857 TCCTCCATGCTGATAATGTGGA 58.952 45.455 0.00 0.00 37.41 4.02
273 302 4.454678 TCCATGCTGATAATGTGGAGAAC 58.545 43.478 0.00 0.00 34.23 3.01
276 305 5.359009 CCATGCTGATAATGTGGAGAACTTT 59.641 40.000 0.00 0.00 31.59 2.66
289 318 3.335579 GAGAACTTTCTACGTTGGGCAT 58.664 45.455 0.00 0.00 37.73 4.40
297 326 3.738982 TCTACGTTGGGCATCCATAATG 58.261 45.455 0.00 0.00 43.63 1.90
302 331 1.401761 TGGGCATCCATAATGTGCAC 58.598 50.000 10.75 10.75 42.46 4.57
303 332 0.675633 GGGCATCCATAATGTGCACC 59.324 55.000 15.69 0.00 40.53 5.01
304 333 0.311790 GGCATCCATAATGTGCACCG 59.688 55.000 15.69 0.00 40.53 4.94
305 334 1.024271 GCATCCATAATGTGCACCGT 58.976 50.000 15.69 4.33 38.68 4.83
306 335 1.268692 GCATCCATAATGTGCACCGTG 60.269 52.381 15.69 7.57 38.68 4.94
307 336 1.024271 ATCCATAATGTGCACCGTGC 58.976 50.000 16.93 16.93 45.29 5.34
308 337 0.035534 TCCATAATGTGCACCGTGCT 60.036 50.000 23.52 6.64 45.31 4.40
309 338 1.208293 TCCATAATGTGCACCGTGCTA 59.792 47.619 23.52 13.35 45.31 3.49
310 339 2.158827 TCCATAATGTGCACCGTGCTAT 60.159 45.455 23.52 14.91 45.31 2.97
311 340 2.031769 CCATAATGTGCACCGTGCTATG 60.032 50.000 23.52 19.99 45.31 2.23
312 341 1.662517 TAATGTGCACCGTGCTATGG 58.337 50.000 23.52 0.00 45.31 2.74
313 342 0.322456 AATGTGCACCGTGCTATGGT 60.322 50.000 23.52 3.58 45.31 3.55
320 349 2.315925 ACCGTGCTATGGTGATCAAG 57.684 50.000 0.00 0.00 35.83 3.02
321 350 1.555075 ACCGTGCTATGGTGATCAAGT 59.445 47.619 0.00 0.00 35.83 3.16
322 351 2.027192 ACCGTGCTATGGTGATCAAGTT 60.027 45.455 0.00 0.00 35.83 2.66
323 352 2.609459 CCGTGCTATGGTGATCAAGTTC 59.391 50.000 0.00 0.00 0.00 3.01
324 353 2.609459 CGTGCTATGGTGATCAAGTTCC 59.391 50.000 0.00 0.00 0.00 3.62
325 354 2.609459 GTGCTATGGTGATCAAGTTCCG 59.391 50.000 0.00 0.00 0.00 4.30
326 355 1.599542 GCTATGGTGATCAAGTTCCGC 59.400 52.381 0.00 0.00 0.00 5.54
327 356 2.743183 GCTATGGTGATCAAGTTCCGCT 60.743 50.000 0.00 0.00 0.00 5.52
328 357 3.492656 GCTATGGTGATCAAGTTCCGCTA 60.493 47.826 0.00 0.00 0.00 4.26
358 387 2.637521 CAGCCAGTGCAGTGACATT 58.362 52.632 23.34 2.39 41.13 2.71
391 421 2.044352 GGAACCACCCAATCCCGG 60.044 66.667 0.00 0.00 0.00 5.73
404 434 2.747446 CAATCCCGGTAACCAGACAAAG 59.253 50.000 0.00 0.00 0.00 2.77
412 442 6.040878 CCGGTAACCAGACAAAGATTACTAG 58.959 44.000 0.00 0.00 0.00 2.57
414 444 5.816258 GGTAACCAGACAAAGATTACTAGCC 59.184 44.000 0.00 0.00 0.00 3.93
415 445 5.499004 AACCAGACAAAGATTACTAGCCA 57.501 39.130 0.00 0.00 0.00 4.75
436 466 6.094603 AGCCAAACTAATTACTCAGCAATCAG 59.905 38.462 0.00 0.00 0.00 2.90
450 480 4.442350 GCAATCAGCTGTGTTTGTTTTC 57.558 40.909 14.67 1.04 41.15 2.29
451 481 4.114794 GCAATCAGCTGTGTTTGTTTTCT 58.885 39.130 14.67 0.00 41.15 2.52
452 482 4.207841 GCAATCAGCTGTGTTTGTTTTCTC 59.792 41.667 14.67 0.09 41.15 2.87
453 483 5.585390 CAATCAGCTGTGTTTGTTTTCTCT 58.415 37.500 14.67 0.00 31.31 3.10
454 484 5.841957 ATCAGCTGTGTTTGTTTTCTCTT 57.158 34.783 14.67 0.00 0.00 2.85
455 485 5.643379 TCAGCTGTGTTTGTTTTCTCTTT 57.357 34.783 14.67 0.00 0.00 2.52
456 486 5.401550 TCAGCTGTGTTTGTTTTCTCTTTG 58.598 37.500 14.67 0.00 0.00 2.77
459 489 6.532657 CAGCTGTGTTTGTTTTCTCTTTGAAT 59.467 34.615 5.25 0.00 34.24 2.57
473 503 5.240183 TCTCTTTGAATGCTTTCCTGAAGTG 59.760 40.000 9.63 10.90 37.69 3.16
475 505 1.888512 TGAATGCTTTCCTGAAGTGCC 59.111 47.619 9.63 0.00 37.69 5.01
478 508 1.165907 TGCTTTCCTGAAGTGCCGTG 61.166 55.000 0.00 0.00 37.69 4.94
479 509 1.166531 GCTTTCCTGAAGTGCCGTGT 61.167 55.000 0.00 0.00 37.69 4.49
480 510 1.308998 CTTTCCTGAAGTGCCGTGTT 58.691 50.000 0.00 0.00 0.00 3.32
481 511 2.489971 CTTTCCTGAAGTGCCGTGTTA 58.510 47.619 0.00 0.00 0.00 2.41
482 512 2.623878 TTCCTGAAGTGCCGTGTTAA 57.376 45.000 0.00 0.00 0.00 2.01
483 513 2.163818 TCCTGAAGTGCCGTGTTAAG 57.836 50.000 0.00 0.00 0.00 1.85
492 528 1.001974 TGCCGTGTTAAGCTCTGTGAT 59.998 47.619 0.00 0.00 0.00 3.06
495 531 1.920574 CGTGTTAAGCTCTGTGATCCG 59.079 52.381 0.00 0.00 0.00 4.18
513 549 4.194678 TCCGGAGTCCCTGAGTATTATT 57.805 45.455 0.00 0.00 0.00 1.40
518 554 6.113411 CGGAGTCCCTGAGTATTATTTTTGT 58.887 40.000 2.80 0.00 0.00 2.83
538 574 5.606348 TGTTTAATCACCCAAAAACAGCT 57.394 34.783 0.00 0.00 37.02 4.24
554 590 9.914923 CAAAAACAGCTTTACTAATTTTTGGTC 57.085 29.630 10.63 0.00 42.76 4.02
622 658 2.617308 CAAGAGCATGTTCCATAGCCAG 59.383 50.000 5.87 0.00 0.00 4.85
658 694 3.988819 TCTTGCCAACATTAGCCAAAAC 58.011 40.909 0.00 0.00 0.00 2.43
747 785 8.333235 TCAAATCAAACATACTACCCAAGGTAT 58.667 33.333 0.00 0.00 37.56 2.73
763 801 1.962100 GGTATTACCGTCTCTCCCCTG 59.038 57.143 0.00 0.00 0.00 4.45
781 819 3.768757 CCCTGGCAAATCCAACTCATTAA 59.231 43.478 0.00 0.00 46.01 1.40
894 932 7.017056 CCCATTCTCTTCACTAGGATAGGATTT 59.983 40.741 0.00 0.00 44.97 2.17
895 933 7.877097 CCATTCTCTTCACTAGGATAGGATTTG 59.123 40.741 0.00 0.00 44.97 2.32
896 934 6.985653 TCTCTTCACTAGGATAGGATTTGG 57.014 41.667 0.00 0.00 44.97 3.28
897 935 5.305644 TCTCTTCACTAGGATAGGATTTGGC 59.694 44.000 0.00 0.00 44.97 4.52
991 1090 4.390264 GGAGAGTTTTGTTCACCTAAGCT 58.610 43.478 0.00 0.00 0.00 3.74
996 1095 7.224297 AGAGTTTTGTTCACCTAAGCTCATTA 58.776 34.615 0.00 0.00 33.29 1.90
1088 1187 0.039180 TCGTAGCCTCTTCCACCTCA 59.961 55.000 0.00 0.00 0.00 3.86
1109 1208 1.141657 GGGATGAGAACATGCTGGCTA 59.858 52.381 0.00 0.00 42.95 3.93
1236 1335 0.613012 ACTTGGAGCCTGAAATGCCC 60.613 55.000 0.00 0.00 0.00 5.36
1301 1400 0.678395 CGATATGGTCTGAGCAGCCT 59.322 55.000 15.33 1.33 0.00 4.58
1319 1418 3.715097 GACCCCTCTGCTGCAGCT 61.715 66.667 36.61 17.15 42.66 4.24
1322 1421 2.350134 CCCTCTGCTGCAGCTTGA 59.650 61.111 36.61 30.10 42.66 3.02
1370 1469 7.936496 TGACTGGCTTCATATTCAAAATGTA 57.064 32.000 0.00 0.00 0.00 2.29
1410 1509 0.768221 TTGGAAGGAGAGGTGCAGGT 60.768 55.000 0.00 0.00 0.00 4.00
1481 1580 4.529897 TCAAGCATGATTATCCTTGCTGT 58.470 39.130 16.73 7.74 43.78 4.40
1483 1582 4.160642 AGCATGATTATCCTTGCTGTGA 57.839 40.909 15.72 0.00 43.20 3.58
1515 1614 1.619654 TTTGGGATGGAACTGTGCAG 58.380 50.000 0.00 0.00 0.00 4.41
1548 1711 3.181520 CCTTGGTTTGCGAGTAATCTTCG 60.182 47.826 0.00 0.00 0.00 3.79
1589 1753 1.149401 GGGGCTCCAGGTGCTTATC 59.851 63.158 13.24 0.00 0.00 1.75
1600 1814 4.633565 CCAGGTGCTTATCTGTTCTTCTTC 59.366 45.833 0.00 0.00 0.00 2.87
1762 1981 5.126222 TCACTTGTTTCACAGGCATGTAAAA 59.874 36.000 2.51 0.00 37.65 1.52
1793 2012 7.166473 GCAAATCAACTGAACTTTGTAAGTGAG 59.834 37.037 7.33 0.00 41.91 3.51
2045 2288 4.766404 ATCGGATTTTTCACTTTTCGCT 57.234 36.364 0.00 0.00 0.00 4.93
2094 2364 8.596781 AGTAAAGTAGACCATGAAGTACATCT 57.403 34.615 0.00 0.00 37.07 2.90
2180 2453 2.358898 GCCTTTGGTGCATACAGTATGG 59.641 50.000 20.16 4.19 43.62 2.74
2267 2753 4.069304 TGTTGAGAACGATTTACCCCTTG 58.931 43.478 0.00 0.00 0.00 3.61
2269 2755 2.014857 GAGAACGATTTACCCCTTGGC 58.985 52.381 0.00 0.00 33.59 4.52
2274 2760 1.092348 GATTTACCCCTTGGCGTGAC 58.908 55.000 0.00 0.00 33.59 3.67
2303 2789 8.454106 AGTAAATCTGCATGTTATTGAACTGTC 58.546 33.333 0.00 0.00 36.45 3.51
2366 2855 2.750350 CAAACGTGGGAGGAGCCT 59.250 61.111 0.00 0.00 36.66 4.58
2399 2888 5.104776 TGGAAATCAAGGATGACCACTCTAG 60.105 44.000 0.00 0.00 38.69 2.43
2434 2929 2.810852 GGAAGGAAAGACAACTCAGCTG 59.189 50.000 7.63 7.63 0.00 4.24
2575 3070 4.492611 TCATGATAAGCGAGCTGATGATC 58.507 43.478 0.00 1.91 0.00 2.92
2579 3074 1.880271 AAGCGAGCTGATGATCATGG 58.120 50.000 14.30 6.91 0.00 3.66
2678 3173 6.720112 TGACACATCTGATAGATCACATGA 57.280 37.500 12.89 0.00 35.89 3.07
2985 3480 3.979101 AGGGAGAAGAGAAGAAGCTTG 57.021 47.619 2.10 0.00 0.00 4.01
3116 3612 6.867662 AATTCTTCTTACTGAACACACTGG 57.132 37.500 0.00 0.00 0.00 4.00
3161 3660 8.772250 TGAGATTATGGACTTCTTGACCTTAAT 58.228 33.333 0.00 0.00 40.54 1.40
3166 3665 9.753674 TTATGGACTTCTTGACCTTAATCAAAT 57.246 29.630 0.00 0.00 38.12 2.32
3348 3847 7.549488 GTCCTCATTAGCTGCTTTAGTTTCTTA 59.451 37.037 7.79 0.00 0.00 2.10
3350 3849 9.547753 CCTCATTAGCTGCTTTAGTTTCTTATA 57.452 33.333 7.79 0.00 0.00 0.98
3559 4078 0.912486 ACCCCTCCTTACATGCTCAC 59.088 55.000 0.00 0.00 0.00 3.51
3698 4379 7.498900 TCACGGATAGCATCTATTTGTTTTCAT 59.501 33.333 0.00 0.00 0.00 2.57
3699 4380 8.131100 CACGGATAGCATCTATTTGTTTTCATT 58.869 33.333 0.00 0.00 0.00 2.57
3704 4385 7.966246 AGCATCTATTTGTTTTCATTTTGCA 57.034 28.000 0.00 0.00 0.00 4.08
3926 4624 5.118990 ACAATTACTCTGCGATGCACTAAT 58.881 37.500 0.00 0.00 33.79 1.73
3989 4687 4.901197 TTGTAGGGTGTGAAGAGCAATA 57.099 40.909 0.00 0.00 0.00 1.90
4027 4725 0.465460 AGAGCAAGGCCGTCAACAAA 60.465 50.000 0.00 0.00 0.00 2.83
4126 4824 0.179097 GGAGAGATGGCCGAACTGTC 60.179 60.000 0.00 5.28 0.00 3.51
4136 4834 4.070552 GAACTGTCGGCCTCGGCT 62.071 66.667 8.00 0.00 42.24 5.52
4142 4840 4.143333 TCGGCCTCGGCTTGTAGC 62.143 66.667 8.00 0.00 41.46 3.58
4184 4882 2.355108 GCAGCACCCAAGATCTGAAGTA 60.355 50.000 0.00 0.00 0.00 2.24
4215 4913 2.084546 GGTACACAGTTCATTGGCTCC 58.915 52.381 0.00 0.00 0.00 4.70
4244 4942 3.029320 TGCATGTGGAAATTTGACTGC 57.971 42.857 0.00 5.24 0.00 4.40
4357 5057 1.376609 CTGGCATAACTTGTCGCCCC 61.377 60.000 0.00 0.00 44.22 5.80
4429 5143 4.284550 ACAGCGGGTGGGCAACAT 62.285 61.111 12.33 0.00 39.74 2.71
4432 5146 1.677633 AGCGGGTGGGCAACATTAC 60.678 57.895 0.00 0.00 39.74 1.89
4436 5150 1.613255 CGGGTGGGCAACATTACTCTT 60.613 52.381 0.00 0.00 39.74 2.85
4437 5151 2.355310 CGGGTGGGCAACATTACTCTTA 60.355 50.000 0.00 0.00 39.74 2.10
4438 5152 3.014623 GGGTGGGCAACATTACTCTTAC 58.985 50.000 0.00 0.00 39.74 2.34
4444 5158 7.068226 GGTGGGCAACATTACTCTTACATATTT 59.932 37.037 0.00 0.00 39.74 1.40
4445 5159 9.116067 GTGGGCAACATTACTCTTACATATTTA 57.884 33.333 0.00 0.00 39.74 1.40
4476 5190 2.749621 GTTGGATCCCAAAGCTACACAG 59.250 50.000 9.90 0.00 45.73 3.66
4494 5209 7.477733 GCTACACAGTTTTCTTATTCGCTTAAC 59.522 37.037 0.00 0.00 0.00 2.01
4497 5212 8.493547 ACACAGTTTTCTTATTCGCTTAACTAC 58.506 33.333 0.00 0.00 0.00 2.73
4505 5220 7.130917 TCTTATTCGCTTAACTACGAGATGAC 58.869 38.462 0.00 0.00 39.81 3.06
4508 5223 3.311871 TCGCTTAACTACGAGATGACCTC 59.688 47.826 0.00 0.00 38.55 3.85
4514 5229 4.757019 ACTACGAGATGACCTCTGAGTA 57.243 45.455 3.66 0.00 39.78 2.59
4568 5283 9.762933 AATATAACATGTTTTTGCAGTTCAGTT 57.237 25.926 17.78 0.00 0.00 3.16
4569 5284 9.762933 ATATAACATGTTTTTGCAGTTCAGTTT 57.237 25.926 17.78 0.00 0.00 2.66
4570 5285 5.783100 ACATGTTTTTGCAGTTCAGTTTG 57.217 34.783 0.00 0.00 0.00 2.93
4571 5286 5.477510 ACATGTTTTTGCAGTTCAGTTTGA 58.522 33.333 0.00 0.00 0.00 2.69
4572 5287 5.931146 ACATGTTTTTGCAGTTCAGTTTGAA 59.069 32.000 0.00 0.00 33.32 2.69
4601 5316 9.688091 ACATTAGTTTACAGAGAGAGTAGATGA 57.312 33.333 0.00 0.00 0.00 2.92
4605 5320 8.685838 AGTTTACAGAGAGAGTAGATGATACC 57.314 38.462 0.00 0.00 0.00 2.73
4606 5321 7.722285 AGTTTACAGAGAGAGTAGATGATACCC 59.278 40.741 0.00 0.00 0.00 3.69
4607 5322 4.993028 ACAGAGAGAGTAGATGATACCCC 58.007 47.826 0.00 0.00 0.00 4.95
4608 5323 4.006989 CAGAGAGAGTAGATGATACCCCG 58.993 52.174 0.00 0.00 0.00 5.73
4609 5324 2.750712 GAGAGAGTAGATGATACCCCGC 59.249 54.545 0.00 0.00 0.00 6.13
4610 5325 2.108425 AGAGAGTAGATGATACCCCGCA 59.892 50.000 0.00 0.00 0.00 5.69
4611 5326 2.229302 GAGAGTAGATGATACCCCGCAC 59.771 54.545 0.00 0.00 0.00 5.34
4612 5327 0.959553 AGTAGATGATACCCCGCACG 59.040 55.000 0.00 0.00 0.00 5.34
4613 5328 0.672342 GTAGATGATACCCCGCACGT 59.328 55.000 0.00 0.00 0.00 4.49
4614 5329 1.068127 GTAGATGATACCCCGCACGTT 59.932 52.381 0.00 0.00 0.00 3.99
4615 5330 0.179084 AGATGATACCCCGCACGTTG 60.179 55.000 0.00 0.00 0.00 4.10
4616 5331 0.461339 GATGATACCCCGCACGTTGT 60.461 55.000 0.00 0.00 0.00 3.32
4617 5332 0.035820 ATGATACCCCGCACGTTGTT 60.036 50.000 0.00 0.00 0.00 2.83
4618 5333 0.951525 TGATACCCCGCACGTTGTTG 60.952 55.000 0.00 0.00 0.00 3.33
4619 5334 2.248274 GATACCCCGCACGTTGTTGC 62.248 60.000 0.00 0.00 39.28 4.17
4627 5342 2.817538 GCACGTTGTTGCGGTAATAT 57.182 45.000 0.00 0.00 35.98 1.28
4628 5343 3.125698 GCACGTTGTTGCGGTAATATT 57.874 42.857 0.00 0.00 35.98 1.28
4629 5344 3.494232 GCACGTTGTTGCGGTAATATTT 58.506 40.909 0.00 0.00 35.98 1.40
4630 5345 3.540738 GCACGTTGTTGCGGTAATATTTC 59.459 43.478 0.00 0.00 35.98 2.17
4631 5346 4.670735 GCACGTTGTTGCGGTAATATTTCT 60.671 41.667 0.00 0.00 35.98 2.52
4632 5347 5.446206 GCACGTTGTTGCGGTAATATTTCTA 60.446 40.000 0.00 0.00 35.98 2.10
4633 5348 6.535811 CACGTTGTTGCGGTAATATTTCTAA 58.464 36.000 0.00 0.00 35.98 2.10
4634 5349 7.184106 CACGTTGTTGCGGTAATATTTCTAAT 58.816 34.615 0.00 0.00 35.98 1.73
4635 5350 8.329583 CACGTTGTTGCGGTAATATTTCTAATA 58.670 33.333 0.00 0.00 35.98 0.98
4636 5351 9.048446 ACGTTGTTGCGGTAATATTTCTAATAT 57.952 29.630 0.00 0.00 35.98 1.28
4661 5376 3.947910 AACTGAGAATTGGTTGCATGG 57.052 42.857 0.00 0.00 0.00 3.66
4662 5377 3.159213 ACTGAGAATTGGTTGCATGGA 57.841 42.857 0.00 0.00 0.00 3.41
4663 5378 3.499338 ACTGAGAATTGGTTGCATGGAA 58.501 40.909 0.00 0.00 0.00 3.53
4664 5379 3.256631 ACTGAGAATTGGTTGCATGGAAC 59.743 43.478 20.76 20.76 0.00 3.62
4799 5514 8.755696 TTTTTCTTATGCATGGTTGTATGTTC 57.244 30.769 10.16 0.00 30.26 3.18
4800 5515 7.701539 TTTCTTATGCATGGTTGTATGTTCT 57.298 32.000 10.16 0.00 30.26 3.01
4801 5516 6.682423 TCTTATGCATGGTTGTATGTTCTG 57.318 37.500 10.16 0.00 30.26 3.02
4802 5517 5.589855 TCTTATGCATGGTTGTATGTTCTGG 59.410 40.000 10.16 0.00 30.26 3.86
4803 5518 3.153369 TGCATGGTTGTATGTTCTGGT 57.847 42.857 0.00 0.00 0.00 4.00
4804 5519 2.819019 TGCATGGTTGTATGTTCTGGTG 59.181 45.455 0.00 0.00 0.00 4.17
4805 5520 2.415893 GCATGGTTGTATGTTCTGGTGC 60.416 50.000 0.00 0.00 0.00 5.01
4806 5521 1.904287 TGGTTGTATGTTCTGGTGCC 58.096 50.000 0.00 0.00 0.00 5.01
4807 5522 1.423541 TGGTTGTATGTTCTGGTGCCT 59.576 47.619 0.00 0.00 0.00 4.75
4808 5523 2.158534 TGGTTGTATGTTCTGGTGCCTT 60.159 45.455 0.00 0.00 0.00 4.35
4809 5524 2.890945 GGTTGTATGTTCTGGTGCCTTT 59.109 45.455 0.00 0.00 0.00 3.11
4810 5525 3.320826 GGTTGTATGTTCTGGTGCCTTTT 59.679 43.478 0.00 0.00 0.00 2.27
4811 5526 4.202212 GGTTGTATGTTCTGGTGCCTTTTT 60.202 41.667 0.00 0.00 0.00 1.94
4832 5547 7.589574 TTTTTCATGCATGTTGAATGATGAG 57.410 32.000 25.43 0.00 41.78 2.90
4833 5548 4.911514 TCATGCATGTTGAATGATGAGG 57.088 40.909 25.43 0.00 37.50 3.86
4834 5549 4.274978 TCATGCATGTTGAATGATGAGGT 58.725 39.130 25.43 0.00 37.50 3.85
4835 5550 4.097286 TCATGCATGTTGAATGATGAGGTG 59.903 41.667 25.43 0.00 37.50 4.00
4836 5551 3.688235 TGCATGTTGAATGATGAGGTGA 58.312 40.909 0.00 0.00 0.00 4.02
4837 5552 3.441222 TGCATGTTGAATGATGAGGTGAC 59.559 43.478 0.00 0.00 0.00 3.67
4838 5553 3.441222 GCATGTTGAATGATGAGGTGACA 59.559 43.478 0.00 0.00 0.00 3.58
4839 5554 4.097437 GCATGTTGAATGATGAGGTGACAT 59.903 41.667 0.00 0.00 0.00 3.06
4840 5555 5.393787 GCATGTTGAATGATGAGGTGACATT 60.394 40.000 0.00 0.00 37.03 2.71
4841 5556 5.885230 TGTTGAATGATGAGGTGACATTC 57.115 39.130 0.00 0.00 45.46 2.67
4842 5557 5.563592 TGTTGAATGATGAGGTGACATTCT 58.436 37.500 16.26 0.00 45.46 2.40
4843 5558 6.005823 TGTTGAATGATGAGGTGACATTCTT 58.994 36.000 16.26 0.00 45.46 2.52
4844 5559 6.149973 TGTTGAATGATGAGGTGACATTCTTC 59.850 38.462 16.26 11.16 45.46 2.87
4845 5560 5.188434 TGAATGATGAGGTGACATTCTTCC 58.812 41.667 16.26 0.00 45.46 3.46
4846 5561 4.849813 ATGATGAGGTGACATTCTTCCA 57.150 40.909 0.00 0.00 0.00 3.53
4847 5562 4.849813 TGATGAGGTGACATTCTTCCAT 57.150 40.909 0.00 0.00 0.00 3.41
4848 5563 4.520179 TGATGAGGTGACATTCTTCCATG 58.480 43.478 0.00 0.00 0.00 3.66
4849 5564 2.715046 TGAGGTGACATTCTTCCATGC 58.285 47.619 0.00 0.00 0.00 4.06
4850 5565 2.306805 TGAGGTGACATTCTTCCATGCT 59.693 45.455 0.00 0.00 0.00 3.79
4851 5566 2.681848 GAGGTGACATTCTTCCATGCTG 59.318 50.000 0.00 0.00 0.00 4.41
4852 5567 2.306805 AGGTGACATTCTTCCATGCTGA 59.693 45.455 0.00 0.00 0.00 4.26
4853 5568 2.681848 GGTGACATTCTTCCATGCTGAG 59.318 50.000 0.00 0.00 0.00 3.35
4854 5569 3.603532 GTGACATTCTTCCATGCTGAGA 58.396 45.455 0.00 0.00 0.00 3.27
4855 5570 3.622163 GTGACATTCTTCCATGCTGAGAG 59.378 47.826 0.00 0.00 0.00 3.20
4856 5571 3.516700 TGACATTCTTCCATGCTGAGAGA 59.483 43.478 0.00 0.00 0.00 3.10
4857 5572 4.019950 TGACATTCTTCCATGCTGAGAGAA 60.020 41.667 0.00 0.00 0.00 2.87
4858 5573 4.914983 ACATTCTTCCATGCTGAGAGAAA 58.085 39.130 0.00 0.00 30.96 2.52
4859 5574 5.507637 ACATTCTTCCATGCTGAGAGAAAT 58.492 37.500 0.00 0.00 30.96 2.17
4860 5575 6.656902 ACATTCTTCCATGCTGAGAGAAATA 58.343 36.000 0.00 0.00 30.96 1.40
4861 5576 7.114754 ACATTCTTCCATGCTGAGAGAAATAA 58.885 34.615 0.00 0.00 30.96 1.40
4862 5577 7.282675 ACATTCTTCCATGCTGAGAGAAATAAG 59.717 37.037 0.00 0.00 30.96 1.73
4863 5578 6.305272 TCTTCCATGCTGAGAGAAATAAGT 57.695 37.500 0.00 0.00 0.00 2.24
4864 5579 6.715280 TCTTCCATGCTGAGAGAAATAAGTT 58.285 36.000 0.00 0.00 0.00 2.66
4865 5580 6.596888 TCTTCCATGCTGAGAGAAATAAGTTG 59.403 38.462 0.00 0.00 0.00 3.16
4866 5581 5.188434 TCCATGCTGAGAGAAATAAGTTGG 58.812 41.667 0.00 0.00 0.00 3.77
4867 5582 4.946157 CCATGCTGAGAGAAATAAGTTGGT 59.054 41.667 0.00 0.00 0.00 3.67
4868 5583 5.163683 CCATGCTGAGAGAAATAAGTTGGTG 60.164 44.000 0.00 0.00 0.00 4.17
4869 5584 4.326826 TGCTGAGAGAAATAAGTTGGTGG 58.673 43.478 0.00 0.00 0.00 4.61
4870 5585 3.691609 GCTGAGAGAAATAAGTTGGTGGG 59.308 47.826 0.00 0.00 0.00 4.61
4871 5586 4.265073 CTGAGAGAAATAAGTTGGTGGGG 58.735 47.826 0.00 0.00 0.00 4.96
4872 5587 3.010138 TGAGAGAAATAAGTTGGTGGGGG 59.990 47.826 0.00 0.00 0.00 5.40
4873 5588 2.100197 GAGAAATAAGTTGGTGGGGGC 58.900 52.381 0.00 0.00 0.00 5.80
4874 5589 1.716503 AGAAATAAGTTGGTGGGGGCT 59.283 47.619 0.00 0.00 0.00 5.19
4875 5590 2.923629 AGAAATAAGTTGGTGGGGGCTA 59.076 45.455 0.00 0.00 0.00 3.93
4876 5591 3.335484 AGAAATAAGTTGGTGGGGGCTAA 59.665 43.478 0.00 0.00 0.00 3.09
4877 5592 2.820728 ATAAGTTGGTGGGGGCTAAC 57.179 50.000 0.00 0.00 0.00 2.34
4878 5593 1.750022 TAAGTTGGTGGGGGCTAACT 58.250 50.000 0.00 0.00 41.00 2.24
4879 5594 1.750022 AAGTTGGTGGGGGCTAACTA 58.250 50.000 0.00 0.00 38.86 2.24
4880 5595 1.981259 AGTTGGTGGGGGCTAACTAT 58.019 50.000 0.00 0.00 38.20 2.12
4881 5596 2.284770 AGTTGGTGGGGGCTAACTATT 58.715 47.619 0.00 0.00 38.20 1.73
4882 5597 2.652857 AGTTGGTGGGGGCTAACTATTT 59.347 45.455 0.00 0.00 38.20 1.40
4883 5598 3.853784 AGTTGGTGGGGGCTAACTATTTA 59.146 43.478 0.00 0.00 38.20 1.40
4884 5599 4.079958 AGTTGGTGGGGGCTAACTATTTAG 60.080 45.833 0.00 0.00 38.20 1.85
4885 5600 3.738434 TGGTGGGGGCTAACTATTTAGA 58.262 45.455 4.14 0.00 37.49 2.10
4886 5601 4.312487 TGGTGGGGGCTAACTATTTAGAT 58.688 43.478 4.14 0.00 37.49 1.98
4887 5602 5.478844 TGGTGGGGGCTAACTATTTAGATA 58.521 41.667 4.14 0.00 37.49 1.98
4888 5603 6.095680 TGGTGGGGGCTAACTATTTAGATAT 58.904 40.000 4.14 0.00 37.49 1.63
4889 5604 7.257893 TGGTGGGGGCTAACTATTTAGATATA 58.742 38.462 4.14 0.00 37.49 0.86
4890 5605 7.402071 TGGTGGGGGCTAACTATTTAGATATAG 59.598 40.741 4.14 0.00 37.49 1.31
4891 5606 7.622479 GGTGGGGGCTAACTATTTAGATATAGA 59.378 40.741 4.14 0.00 37.49 1.98
4892 5607 9.043548 GTGGGGGCTAACTATTTAGATATAGAA 57.956 37.037 4.14 0.00 37.49 2.10
4893 5608 9.624037 TGGGGGCTAACTATTTAGATATAGAAA 57.376 33.333 4.14 0.00 37.49 2.52
4914 5629 8.768501 AGAAAGATTTATTTCCTCCATTACCC 57.231 34.615 0.00 0.00 39.53 3.69
4915 5630 8.343787 AGAAAGATTTATTTCCTCCATTACCCA 58.656 33.333 0.00 0.00 39.53 4.51
4916 5631 7.898014 AAGATTTATTTCCTCCATTACCCAC 57.102 36.000 0.00 0.00 0.00 4.61
4917 5632 7.226059 AGATTTATTTCCTCCATTACCCACT 57.774 36.000 0.00 0.00 0.00 4.00
4918 5633 7.652554 AGATTTATTTCCTCCATTACCCACTT 58.347 34.615 0.00 0.00 0.00 3.16
4919 5634 8.122481 AGATTTATTTCCTCCATTACCCACTTT 58.878 33.333 0.00 0.00 0.00 2.66
4920 5635 8.679344 ATTTATTTCCTCCATTACCCACTTTT 57.321 30.769 0.00 0.00 0.00 2.27
4921 5636 8.499288 TTTATTTCCTCCATTACCCACTTTTT 57.501 30.769 0.00 0.00 0.00 1.94
4922 5637 5.799827 TTTCCTCCATTACCCACTTTTTG 57.200 39.130 0.00 0.00 0.00 2.44
4923 5638 4.733077 TCCTCCATTACCCACTTTTTGA 57.267 40.909 0.00 0.00 0.00 2.69
4924 5639 5.068215 TCCTCCATTACCCACTTTTTGAA 57.932 39.130 0.00 0.00 0.00 2.69
4925 5640 5.459505 TCCTCCATTACCCACTTTTTGAAA 58.540 37.500 0.00 0.00 0.00 2.69
4926 5641 5.538433 TCCTCCATTACCCACTTTTTGAAAG 59.462 40.000 0.00 0.00 0.00 2.62
4927 5642 5.538433 CCTCCATTACCCACTTTTTGAAAGA 59.462 40.000 7.37 0.00 0.00 2.52
4928 5643 6.211384 CCTCCATTACCCACTTTTTGAAAGAT 59.789 38.462 7.37 0.00 0.00 2.40
4929 5644 7.227049 TCCATTACCCACTTTTTGAAAGATC 57.773 36.000 7.37 0.00 0.00 2.75
4930 5645 7.010160 TCCATTACCCACTTTTTGAAAGATCT 58.990 34.615 7.37 0.00 0.00 2.75
4931 5646 7.508977 TCCATTACCCACTTTTTGAAAGATCTT 59.491 33.333 0.88 0.88 0.00 2.40
4932 5647 7.599998 CCATTACCCACTTTTTGAAAGATCTTG 59.400 37.037 9.17 0.00 0.00 3.02
4933 5648 7.889873 TTACCCACTTTTTGAAAGATCTTGA 57.110 32.000 9.17 0.00 0.00 3.02
4934 5649 6.790232 ACCCACTTTTTGAAAGATCTTGAA 57.210 33.333 9.17 2.35 0.00 2.69
4935 5650 7.181569 ACCCACTTTTTGAAAGATCTTGAAA 57.818 32.000 9.17 8.61 0.00 2.69
4936 5651 7.619965 ACCCACTTTTTGAAAGATCTTGAAAA 58.380 30.769 9.17 13.83 0.00 2.29
4937 5652 7.549134 ACCCACTTTTTGAAAGATCTTGAAAAC 59.451 33.333 18.58 7.24 0.00 2.43
4938 5653 7.765819 CCCACTTTTTGAAAGATCTTGAAAACT 59.234 33.333 18.58 9.76 0.00 2.66
4939 5654 9.154847 CCACTTTTTGAAAGATCTTGAAAACTT 57.845 29.630 18.58 10.22 0.00 2.66
4986 5701 9.002600 TGATTATTCAATATTCGATTGGAGTGG 57.997 33.333 0.00 0.00 0.00 4.00
4987 5702 9.219603 GATTATTCAATATTCGATTGGAGTGGA 57.780 33.333 0.00 0.00 0.00 4.02
4988 5703 9.745018 ATTATTCAATATTCGATTGGAGTGGAT 57.255 29.630 0.00 0.00 0.00 3.41
4989 5704 9.573166 TTATTCAATATTCGATTGGAGTGGATT 57.427 29.630 0.00 0.00 0.00 3.01
4990 5705 7.496529 TTCAATATTCGATTGGAGTGGATTC 57.503 36.000 0.00 0.00 0.00 2.52
4991 5706 6.591001 TCAATATTCGATTGGAGTGGATTCA 58.409 36.000 0.00 0.00 0.00 2.57
4992 5707 6.483307 TCAATATTCGATTGGAGTGGATTCAC 59.517 38.462 0.00 0.00 43.93 3.18
4993 5708 3.694043 TTCGATTGGAGTGGATTCACA 57.306 42.857 6.96 0.00 45.91 3.58
4994 5709 3.694043 TCGATTGGAGTGGATTCACAA 57.306 42.857 6.96 0.00 45.91 3.33
4995 5710 4.220693 TCGATTGGAGTGGATTCACAAT 57.779 40.909 6.96 0.00 45.91 2.71
4996 5711 5.351948 TCGATTGGAGTGGATTCACAATA 57.648 39.130 6.96 0.00 45.91 1.90
4997 5712 5.739959 TCGATTGGAGTGGATTCACAATAA 58.260 37.500 6.96 0.00 45.91 1.40
4998 5713 6.356556 TCGATTGGAGTGGATTCACAATAAT 58.643 36.000 6.96 3.35 45.91 1.28
4999 5714 6.828273 TCGATTGGAGTGGATTCACAATAATT 59.172 34.615 6.96 0.00 45.91 1.40
5000 5715 7.012327 TCGATTGGAGTGGATTCACAATAATTC 59.988 37.037 6.96 0.00 45.91 2.17
5001 5716 7.201723 CGATTGGAGTGGATTCACAATAATTCA 60.202 37.037 6.96 0.00 45.91 2.57
5002 5717 7.773489 TTGGAGTGGATTCACAATAATTCAA 57.227 32.000 6.96 0.00 45.91 2.69
5003 5718 7.773489 TGGAGTGGATTCACAATAATTCAAA 57.227 32.000 6.96 0.00 45.91 2.69
5004 5719 8.187913 TGGAGTGGATTCACAATAATTCAAAA 57.812 30.769 6.96 0.00 45.91 2.44
5005 5720 8.306038 TGGAGTGGATTCACAATAATTCAAAAG 58.694 33.333 6.96 0.00 45.91 2.27
5006 5721 8.522830 GGAGTGGATTCACAATAATTCAAAAGA 58.477 33.333 6.96 0.00 45.91 2.52
5007 5722 9.912634 GAGTGGATTCACAATAATTCAAAAGAA 57.087 29.630 6.96 0.00 45.91 2.52
5080 5795 9.970395 ACACCATATGATTTTATAAACATGCAG 57.030 29.630 3.65 3.51 30.48 4.41
5081 5796 9.970395 CACCATATGATTTTATAAACATGCAGT 57.030 29.630 3.65 3.95 30.48 4.40
5091 5806 7.990541 TTATAAACATGCAGTCATCAATTGC 57.009 32.000 0.00 0.00 40.81 3.56
5092 5807 4.530710 AAACATGCAGTCATCAATTGCT 57.469 36.364 0.00 0.00 41.01 3.91
5093 5808 3.503827 ACATGCAGTCATCAATTGCTG 57.496 42.857 2.80 2.80 41.01 4.41
5094 5809 2.165641 ACATGCAGTCATCAATTGCTGG 59.834 45.455 9.29 0.00 41.01 4.85
5095 5810 2.203470 TGCAGTCATCAATTGCTGGA 57.797 45.000 9.29 5.33 41.01 3.86
5096 5811 1.814394 TGCAGTCATCAATTGCTGGAC 59.186 47.619 9.29 11.43 41.01 4.02
5097 5812 1.814394 GCAGTCATCAATTGCTGGACA 59.186 47.619 19.26 0.00 37.61 4.02
5098 5813 2.426024 GCAGTCATCAATTGCTGGACAT 59.574 45.455 19.26 7.74 37.61 3.06
5099 5814 3.733988 GCAGTCATCAATTGCTGGACATG 60.734 47.826 19.26 15.74 37.61 3.21
5100 5815 3.692593 CAGTCATCAATTGCTGGACATGA 59.307 43.478 19.26 11.84 0.00 3.07
5101 5816 4.157105 CAGTCATCAATTGCTGGACATGAA 59.843 41.667 19.26 0.00 0.00 2.57
5102 5817 4.768448 AGTCATCAATTGCTGGACATGAAA 59.232 37.500 19.26 0.00 0.00 2.69
5103 5818 5.244402 AGTCATCAATTGCTGGACATGAAAA 59.756 36.000 19.26 0.00 0.00 2.29
5104 5819 5.927689 GTCATCAATTGCTGGACATGAAAAA 59.072 36.000 9.29 0.00 0.00 1.94
5129 5844 8.973835 AAAACATATGGTAACCATTGTAAACG 57.026 30.769 7.80 0.00 42.23 3.60
5130 5845 7.925043 AACATATGGTAACCATTGTAAACGA 57.075 32.000 7.80 0.00 42.23 3.85
5131 5846 7.311364 ACATATGGTAACCATTGTAAACGAC 57.689 36.000 7.80 0.00 42.23 4.34
5132 5847 7.107542 ACATATGGTAACCATTGTAAACGACT 58.892 34.615 7.80 0.00 42.23 4.18
5133 5848 5.873179 ATGGTAACCATTGTAAACGACTG 57.127 39.130 0.00 0.00 42.23 3.51
5134 5849 3.499157 TGGTAACCATTGTAAACGACTGC 59.501 43.478 0.00 0.00 0.00 4.40
5135 5850 3.120095 GGTAACCATTGTAAACGACTGCC 60.120 47.826 0.00 0.00 0.00 4.85
5136 5851 1.530323 ACCATTGTAAACGACTGCCC 58.470 50.000 0.00 0.00 0.00 5.36
5137 5852 0.808755 CCATTGTAAACGACTGCCCC 59.191 55.000 0.00 0.00 0.00 5.80
5138 5853 0.446222 CATTGTAAACGACTGCCCCG 59.554 55.000 0.00 0.00 0.00 5.73
5139 5854 0.322322 ATTGTAAACGACTGCCCCGA 59.678 50.000 0.00 0.00 0.00 5.14
5140 5855 0.600782 TTGTAAACGACTGCCCCGAC 60.601 55.000 0.00 0.00 0.00 4.79
5141 5856 1.739196 GTAAACGACTGCCCCGACC 60.739 63.158 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.678336 GCAGCTACTCACCCAAATACAC 59.322 50.000 0.00 0.00 0.00 2.90
39 40 1.619827 TCGTACCGGAAAACAGACCAT 59.380 47.619 9.46 0.00 0.00 3.55
40 41 1.039068 TCGTACCGGAAAACAGACCA 58.961 50.000 9.46 0.00 0.00 4.02
43 44 3.061322 CAACATCGTACCGGAAAACAGA 58.939 45.455 9.46 5.98 0.00 3.41
80 81 4.462483 GGAAGTGCTCAAATCCCAACAATA 59.538 41.667 0.00 0.00 0.00 1.90
81 82 3.259123 GGAAGTGCTCAAATCCCAACAAT 59.741 43.478 0.00 0.00 0.00 2.71
90 91 1.202758 TCGGTGTGGAAGTGCTCAAAT 60.203 47.619 0.00 0.00 0.00 2.32
104 105 3.485463 TTCACCAGAAGAAATCGGTGT 57.515 42.857 7.26 0.00 45.19 4.16
145 147 3.260632 TGTCAGACGAATTCATCCCAAGA 59.739 43.478 6.22 0.00 0.00 3.02
170 174 7.144722 TGCATCAACTTCTCGACATTTTAAT 57.855 32.000 0.00 0.00 0.00 1.40
171 175 6.552859 TGCATCAACTTCTCGACATTTTAA 57.447 33.333 0.00 0.00 0.00 1.52
172 176 6.552859 TTGCATCAACTTCTCGACATTTTA 57.447 33.333 0.00 0.00 0.00 1.52
204 208 7.076842 AGTATACTGCAGCATTTAGTTTGTG 57.923 36.000 15.27 0.00 0.00 3.33
228 257 5.957132 AGGACCCGGAATACTACAATACTA 58.043 41.667 0.73 0.00 0.00 1.82
229 258 4.812653 AGGACCCGGAATACTACAATACT 58.187 43.478 0.73 0.00 0.00 2.12
230 259 4.021632 GGAGGACCCGGAATACTACAATAC 60.022 50.000 0.73 0.00 0.00 1.89
231 260 4.154942 GGAGGACCCGGAATACTACAATA 58.845 47.826 0.73 0.00 0.00 1.90
232 261 2.970640 GGAGGACCCGGAATACTACAAT 59.029 50.000 0.73 0.00 0.00 2.71
234 263 1.288633 TGGAGGACCCGGAATACTACA 59.711 52.381 0.73 0.00 37.93 2.74
237 266 1.424638 CATGGAGGACCCGGAATACT 58.575 55.000 0.73 0.00 37.93 2.12
238 267 0.250338 GCATGGAGGACCCGGAATAC 60.250 60.000 0.73 0.00 37.93 1.89
240 269 1.694169 AGCATGGAGGACCCGGAAT 60.694 57.895 0.73 0.00 37.93 3.01
241 270 2.285368 AGCATGGAGGACCCGGAA 60.285 61.111 0.73 0.00 37.93 4.30
242 271 2.896677 ATCAGCATGGAGGACCCGGA 62.897 60.000 0.73 0.00 37.93 5.14
243 272 1.121407 TATCAGCATGGAGGACCCGG 61.121 60.000 0.00 0.00 37.93 5.73
244 273 0.758734 TTATCAGCATGGAGGACCCG 59.241 55.000 0.00 0.00 37.93 5.28
245 274 2.107204 ACATTATCAGCATGGAGGACCC 59.893 50.000 0.00 0.00 36.16 4.46
246 275 3.144506 CACATTATCAGCATGGAGGACC 58.855 50.000 0.00 0.00 36.16 4.46
247 276 3.144506 CCACATTATCAGCATGGAGGAC 58.855 50.000 0.00 0.00 36.16 3.85
248 277 3.047857 TCCACATTATCAGCATGGAGGA 58.952 45.455 0.00 0.00 34.50 3.71
249 278 3.497103 TCCACATTATCAGCATGGAGG 57.503 47.619 0.00 0.00 34.50 4.30
251 280 4.164796 AGTTCTCCACATTATCAGCATGGA 59.835 41.667 0.00 0.00 37.11 3.41
252 281 4.458397 AGTTCTCCACATTATCAGCATGG 58.542 43.478 0.00 0.00 36.16 3.66
253 282 6.318144 AGAAAGTTCTCCACATTATCAGCATG 59.682 38.462 0.00 0.00 29.94 4.06
254 283 6.421485 AGAAAGTTCTCCACATTATCAGCAT 58.579 36.000 0.00 0.00 29.94 3.79
255 284 5.809001 AGAAAGTTCTCCACATTATCAGCA 58.191 37.500 0.00 0.00 29.94 4.41
256 285 6.019479 CGTAGAAAGTTCTCCACATTATCAGC 60.019 42.308 0.00 0.00 38.70 4.26
262 291 4.755123 CCAACGTAGAAAGTTCTCCACATT 59.245 41.667 0.00 0.00 38.70 2.71
269 298 2.922740 TGCCCAACGTAGAAAGTTCT 57.077 45.000 0.00 0.00 41.24 3.01
273 302 2.107950 TGGATGCCCAACGTAGAAAG 57.892 50.000 0.00 0.00 40.09 2.62
289 318 2.476772 GCACGGTGCACATTATGGA 58.523 52.632 27.10 0.00 44.26 3.41
302 331 2.315925 ACTTGATCACCATAGCACGG 57.684 50.000 0.00 0.00 0.00 4.94
303 332 2.609459 GGAACTTGATCACCATAGCACG 59.391 50.000 0.00 0.00 0.00 5.34
304 333 2.609459 CGGAACTTGATCACCATAGCAC 59.391 50.000 0.00 0.00 0.00 4.40
305 334 2.905075 CGGAACTTGATCACCATAGCA 58.095 47.619 0.00 0.00 0.00 3.49
306 335 1.599542 GCGGAACTTGATCACCATAGC 59.400 52.381 0.00 0.00 0.00 2.97
307 336 3.185246 AGCGGAACTTGATCACCATAG 57.815 47.619 0.00 0.00 0.00 2.23
308 337 4.439057 GTTAGCGGAACTTGATCACCATA 58.561 43.478 0.00 0.00 34.96 2.74
309 338 3.270877 GTTAGCGGAACTTGATCACCAT 58.729 45.455 0.00 0.00 34.96 3.55
310 339 2.614481 GGTTAGCGGAACTTGATCACCA 60.614 50.000 0.00 0.00 38.21 4.17
311 340 2.007608 GGTTAGCGGAACTTGATCACC 58.992 52.381 0.00 0.00 38.21 4.02
312 341 2.695359 TGGTTAGCGGAACTTGATCAC 58.305 47.619 0.00 0.00 38.21 3.06
313 342 3.410631 TTGGTTAGCGGAACTTGATCA 57.589 42.857 0.00 0.00 38.21 2.92
314 343 4.965119 AATTGGTTAGCGGAACTTGATC 57.035 40.909 4.79 0.00 38.21 2.92
315 344 5.722021 AAAATTGGTTAGCGGAACTTGAT 57.278 34.783 4.79 0.00 38.21 2.57
316 345 5.335348 GCTAAAATTGGTTAGCGGAACTTGA 60.335 40.000 6.22 0.00 44.71 3.02
317 346 4.857037 GCTAAAATTGGTTAGCGGAACTTG 59.143 41.667 6.22 0.00 44.71 3.16
318 347 5.055642 GCTAAAATTGGTTAGCGGAACTT 57.944 39.130 6.22 0.00 44.71 2.66
319 348 4.696899 GCTAAAATTGGTTAGCGGAACT 57.303 40.909 6.22 0.00 44.71 3.01
326 355 4.737054 CACTGGCTGCTAAAATTGGTTAG 58.263 43.478 0.00 0.00 34.71 2.34
327 356 3.056891 GCACTGGCTGCTAAAATTGGTTA 60.057 43.478 0.00 0.00 43.33 2.85
328 357 2.289010 GCACTGGCTGCTAAAATTGGTT 60.289 45.455 0.00 0.00 43.33 3.67
353 382 7.878644 GGTTCCCTAGAATATTCAGGTAATGTC 59.121 40.741 22.07 9.47 33.67 3.06
358 387 5.605488 GGTGGTTCCCTAGAATATTCAGGTA 59.395 44.000 22.07 11.56 33.67 3.08
389 419 5.519206 GCTAGTAATCTTTGTCTGGTTACCG 59.481 44.000 0.00 0.00 0.00 4.02
391 421 6.403878 TGGCTAGTAATCTTTGTCTGGTTAC 58.596 40.000 0.00 0.00 0.00 2.50
404 434 8.766151 GCTGAGTAATTAGTTTGGCTAGTAATC 58.234 37.037 0.00 0.00 0.00 1.75
412 442 6.194796 TGATTGCTGAGTAATTAGTTTGGC 57.805 37.500 0.00 1.14 0.00 4.52
436 466 6.699063 CATTCAAAGAGAAAACAAACACAGC 58.301 36.000 0.00 0.00 40.22 4.40
441 471 7.278646 AGGAAAGCATTCAAAGAGAAAACAAAC 59.721 33.333 3.82 0.00 40.22 2.93
445 475 6.507023 TCAGGAAAGCATTCAAAGAGAAAAC 58.493 36.000 3.82 0.00 40.22 2.43
446 476 6.713762 TCAGGAAAGCATTCAAAGAGAAAA 57.286 33.333 3.82 0.00 40.22 2.29
447 477 6.322201 ACTTCAGGAAAGCATTCAAAGAGAAA 59.678 34.615 13.94 0.00 37.93 2.52
448 478 5.829924 ACTTCAGGAAAGCATTCAAAGAGAA 59.170 36.000 13.94 5.87 38.67 2.87
449 479 5.240183 CACTTCAGGAAAGCATTCAAAGAGA 59.760 40.000 13.94 0.00 38.67 3.10
450 480 5.458891 CACTTCAGGAAAGCATTCAAAGAG 58.541 41.667 13.94 6.01 38.67 2.85
451 481 4.261741 GCACTTCAGGAAAGCATTCAAAGA 60.262 41.667 13.94 2.95 38.67 2.52
452 482 3.985925 GCACTTCAGGAAAGCATTCAAAG 59.014 43.478 3.82 6.59 38.67 2.77
453 483 3.243839 GGCACTTCAGGAAAGCATTCAAA 60.244 43.478 3.82 0.00 38.67 2.69
454 484 2.297033 GGCACTTCAGGAAAGCATTCAA 59.703 45.455 3.82 0.00 38.67 2.69
455 485 1.888512 GGCACTTCAGGAAAGCATTCA 59.111 47.619 3.82 0.00 38.67 2.57
456 486 1.135575 CGGCACTTCAGGAAAGCATTC 60.136 52.381 0.00 0.00 38.67 2.67
459 489 1.148273 ACGGCACTTCAGGAAAGCA 59.852 52.632 7.96 0.00 38.67 3.91
473 503 1.661112 GATCACAGAGCTTAACACGGC 59.339 52.381 0.00 0.00 0.00 5.68
475 505 1.920574 CGGATCACAGAGCTTAACACG 59.079 52.381 0.00 0.00 0.00 4.49
478 508 2.166664 ACTCCGGATCACAGAGCTTAAC 59.833 50.000 3.57 0.00 0.00 2.01
479 509 2.427453 GACTCCGGATCACAGAGCTTAA 59.573 50.000 3.57 0.00 0.00 1.85
480 510 2.025155 GACTCCGGATCACAGAGCTTA 58.975 52.381 3.57 0.00 0.00 3.09
481 511 0.820871 GACTCCGGATCACAGAGCTT 59.179 55.000 3.57 0.00 0.00 3.74
482 512 1.040339 GGACTCCGGATCACAGAGCT 61.040 60.000 3.57 0.00 0.00 4.09
483 513 1.439644 GGACTCCGGATCACAGAGC 59.560 63.158 3.57 0.00 0.00 4.09
492 528 3.897657 ATAATACTCAGGGACTCCGGA 57.102 47.619 2.93 2.93 34.60 5.14
495 531 7.939784 AACAAAAATAATACTCAGGGACTCC 57.060 36.000 0.00 0.00 34.60 3.85
513 549 6.881602 AGCTGTTTTTGGGTGATTAAACAAAA 59.118 30.769 0.00 0.00 39.26 2.44
518 554 7.787028 AGTAAAGCTGTTTTTGGGTGATTAAA 58.213 30.769 0.00 0.00 0.00 1.52
533 569 8.082242 GTCATGACCAAAAATTAGTAAAGCTGT 58.918 33.333 15.31 0.00 0.00 4.40
611 647 2.320781 GGACTAGAGCTGGCTATGGAA 58.679 52.381 7.52 0.00 0.00 3.53
622 658 3.758554 TGGCAAGAAAAATGGACTAGAGC 59.241 43.478 0.00 0.00 0.00 4.09
658 694 2.612721 GCTAAGGTTTTGGTTGCCCATG 60.613 50.000 0.00 0.00 41.49 3.66
707 743 4.019792 TGATTTGAGCTCAAGCCAACTA 57.980 40.909 27.02 12.75 43.38 2.24
708 744 2.867624 TGATTTGAGCTCAAGCCAACT 58.132 42.857 27.02 10.53 43.38 3.16
747 785 1.684734 GCCAGGGGAGAGACGGTAA 60.685 63.158 0.00 0.00 0.00 2.85
763 801 5.783111 AGTTGTTAATGAGTTGGATTTGCC 58.217 37.500 0.00 0.00 37.10 4.52
894 932 1.374631 CTTGACTGCTACTGCGCCA 60.375 57.895 4.18 0.00 43.34 5.69
895 933 0.951040 AACTTGACTGCTACTGCGCC 60.951 55.000 4.18 0.00 43.34 6.53
896 934 1.710013 TAACTTGACTGCTACTGCGC 58.290 50.000 0.00 0.00 43.34 6.09
897 935 4.725556 TTTTAACTTGACTGCTACTGCG 57.274 40.909 0.00 0.00 43.34 5.18
991 1090 4.037089 CACAGCTGCAGCCATTTATAATGA 59.963 41.667 34.39 0.00 43.38 2.57
996 1095 0.458669 GCACAGCTGCAGCCATTTAT 59.541 50.000 34.39 12.93 43.62 1.40
1088 1187 0.106819 GCCAGCATGTTCTCATCCCT 60.107 55.000 0.00 0.00 31.15 4.20
1109 1208 1.761198 GGGAACTCGCCCTAGTGTAAT 59.239 52.381 0.00 0.00 45.12 1.89
1236 1335 1.517257 GTCGAGGATGAGGTGCACG 60.517 63.158 11.45 0.00 33.84 5.34
1301 1400 4.025858 GCTGCAGCAGAGGGGTCA 62.026 66.667 33.36 0.00 41.59 4.02
1319 1418 5.048782 CGAGTTCAAGACAAATTCCCATCAA 60.049 40.000 0.00 0.00 0.00 2.57
1322 1421 3.191371 GCGAGTTCAAGACAAATTCCCAT 59.809 43.478 0.00 0.00 0.00 4.00
1370 1469 0.958091 TATGCCAGCAAACAAACGCT 59.042 45.000 0.00 0.00 39.66 5.07
1410 1509 3.007940 CAGGTGGTCTGGTCAAAGATACA 59.992 47.826 0.00 0.00 39.76 2.29
1481 1580 4.584638 TCCCAAATAAAGCTAAGCCTCA 57.415 40.909 0.00 0.00 0.00 3.86
1483 1582 4.079212 TCCATCCCAAATAAAGCTAAGCCT 60.079 41.667 0.00 0.00 0.00 4.58
1589 1753 6.160576 TGGGGAATTTTTGAAGAAGAACAG 57.839 37.500 0.00 0.00 0.00 3.16
1600 1814 6.768483 ACTAATCCAAGTTGGGGAATTTTTG 58.232 36.000 21.85 10.07 38.32 2.44
1631 1845 4.997395 CCTCGAATTCTTCTTCCTCAAACA 59.003 41.667 3.52 0.00 0.00 2.83
1650 1864 2.672961 TTCAGCATTGTACTCCCTCG 57.327 50.000 0.00 0.00 0.00 4.63
1762 1981 2.949447 AGTTCAGTTGATTTGCCAGGT 58.051 42.857 0.00 0.00 0.00 4.00
1793 2012 2.746375 ATCCATCCGGCCTCACACC 61.746 63.158 0.00 0.00 0.00 4.16
2045 2288 9.979578 ACTTATGAATAAAATTTCAAGCACACA 57.020 25.926 0.00 0.00 38.98 3.72
2074 2344 6.607600 TGCTAAGATGTACTTCATGGTCTACT 59.392 38.462 11.02 0.00 39.72 2.57
2075 2345 6.806751 TGCTAAGATGTACTTCATGGTCTAC 58.193 40.000 11.02 0.00 39.72 2.59
2076 2346 7.603180 ATGCTAAGATGTACTTCATGGTCTA 57.397 36.000 11.02 0.00 39.72 2.59
2078 2348 8.662781 TTTATGCTAAGATGTACTTCATGGTC 57.337 34.615 11.02 0.02 39.72 4.02
2126 2399 6.932356 ATCACCATGCACTGAAACTAATAG 57.068 37.500 0.00 0.00 0.00 1.73
2180 2453 1.504221 ACTCCTAGGGGATACTGGGTC 59.496 57.143 18.04 0.00 41.36 4.46
2247 2733 3.681593 CCAAGGGGTAAATCGTTCTCAA 58.318 45.455 0.00 0.00 0.00 3.02
2254 2740 0.391927 TCACGCCAAGGGGTAAATCG 60.392 55.000 8.59 0.00 39.30 3.34
2260 2746 2.203877 TAGGTCACGCCAAGGGGT 60.204 61.111 2.59 2.59 42.09 4.95
2267 2753 2.202566 GCAGATTTACTAGGTCACGCC 58.797 52.381 0.00 0.00 37.58 5.68
2269 2755 4.433615 ACATGCAGATTTACTAGGTCACG 58.566 43.478 0.00 0.00 0.00 4.35
2274 2760 9.113838 AGTTCAATAACATGCAGATTTACTAGG 57.886 33.333 0.00 0.00 38.12 3.02
2303 2789 7.322938 CAGCATCTATCAATAAACAGCAATTCG 59.677 37.037 0.00 0.00 0.00 3.34
2366 2855 5.250543 TCATCCTTGATTTCCACTGGACTAA 59.749 40.000 0.00 0.00 32.71 2.24
2399 2888 0.548510 CCTTCCATTCTCACTCCCCC 59.451 60.000 0.00 0.00 0.00 5.40
2434 2929 4.054671 GCATGGCTAGAGTCATTCTGTAC 58.945 47.826 0.00 0.00 38.49 2.90
2474 2969 5.859205 ATCAGAATGCCTAACAAATTCCC 57.141 39.130 0.00 0.00 34.76 3.97
2475 2970 6.515696 GCCTATCAGAATGCCTAACAAATTCC 60.516 42.308 0.00 0.00 34.76 3.01
2579 3074 2.998316 AGTTCTAGAATGGCTCCTGC 57.002 50.000 8.75 0.00 38.76 4.85
2678 3173 4.768448 TGCTGTCAACATTTCTCCAATCAT 59.232 37.500 0.00 0.00 0.00 2.45
2985 3480 2.222027 CCTGGACCAACAGAACTGAAC 58.778 52.381 8.87 0.00 40.97 3.18
3094 3590 5.760253 CACCAGTGTGTTCAGTAAGAAGAAT 59.240 40.000 0.00 0.00 36.78 2.40
3100 3596 2.560504 TGCACCAGTGTGTTCAGTAAG 58.439 47.619 0.00 0.00 44.65 2.34
3102 3598 2.928801 ATGCACCAGTGTGTTCAGTA 57.071 45.000 0.00 0.00 44.65 2.74
3103 3599 2.057137 AATGCACCAGTGTGTTCAGT 57.943 45.000 0.00 0.00 44.65 3.41
3104 3600 4.456911 AGAATAATGCACCAGTGTGTTCAG 59.543 41.667 0.00 0.00 44.65 3.02
3105 3601 4.397420 AGAATAATGCACCAGTGTGTTCA 58.603 39.130 0.00 0.00 44.65 3.18
3106 3602 6.683974 ATAGAATAATGCACCAGTGTGTTC 57.316 37.500 0.00 0.00 44.65 3.18
3107 3603 8.574251 TTAATAGAATAATGCACCAGTGTGTT 57.426 30.769 0.00 0.00 44.65 3.32
3237 3736 3.015327 ACCTGATTCAGCAGCTTTCATC 58.985 45.455 8.23 0.00 34.56 2.92
3350 3849 7.335171 GCCTCCATCAAATTTTAGAAAAAGCAT 59.665 33.333 0.00 0.00 0.00 3.79
3559 4078 5.686159 AGAATGTTCTTCTTCACTGCAAG 57.314 39.130 0.00 0.00 34.76 4.01
3698 4379 7.180766 AGGAATAATGGAAGGAAAGATGCAAAA 59.819 33.333 0.00 0.00 0.00 2.44
3699 4380 6.669154 AGGAATAATGGAAGGAAAGATGCAAA 59.331 34.615 0.00 0.00 0.00 3.68
3704 4385 5.769835 TGCAGGAATAATGGAAGGAAAGAT 58.230 37.500 0.00 0.00 0.00 2.40
3891 4579 3.503748 AGAGTAATTGTTGTTGCTCAGCC 59.496 43.478 0.00 0.00 41.49 4.85
3926 4624 3.769844 CACCCTCAGGCTCTAAGAAAGTA 59.230 47.826 0.00 0.00 36.11 2.24
3989 4687 0.832135 TCTTGAACCGAGGCAGAGGT 60.832 55.000 0.00 0.00 43.68 3.85
4136 4834 2.560981 TCACATCCAGAGTTCGCTACAA 59.439 45.455 0.00 0.00 0.00 2.41
4142 4840 2.332104 CACACTCACATCCAGAGTTCG 58.668 52.381 0.00 0.00 43.47 3.95
4184 4882 4.101898 TGAACTGTGTACCACATAACAGGT 59.898 41.667 11.98 6.41 43.71 4.00
4215 4913 7.063780 GTCAAATTTCCACATGCAAGGATAAAG 59.936 37.037 6.72 0.00 33.10 1.85
4244 4942 6.272318 TCTACAGTTTTTGATGCAAAACTGG 58.728 36.000 30.72 20.45 42.02 4.00
4288 4988 7.722728 ACATAATAGATGTTCATGAGCCACAAT 59.277 33.333 7.13 0.60 0.00 2.71
4357 5057 0.593128 CCAAGTGCAAAAGTCCTCCG 59.407 55.000 0.00 0.00 0.00 4.63
4476 5190 8.166367 TCTCGTAGTTAAGCGAATAAGAAAAC 57.834 34.615 0.00 0.00 36.65 2.43
4494 5209 4.699637 AGTACTCAGAGGTCATCTCGTAG 58.300 47.826 1.53 0.00 46.82 3.51
4497 5212 6.438259 TTTAAGTACTCAGAGGTCATCTCG 57.562 41.667 1.53 0.00 46.82 4.04
4542 5257 9.762933 AACTGAACTGCAAAAACATGTTATATT 57.237 25.926 12.39 5.00 0.00 1.28
4543 5258 9.762933 AAACTGAACTGCAAAAACATGTTATAT 57.237 25.926 12.39 0.00 0.00 0.86
4544 5259 9.029243 CAAACTGAACTGCAAAAACATGTTATA 57.971 29.630 12.39 0.00 0.00 0.98
4545 5260 7.763528 TCAAACTGAACTGCAAAAACATGTTAT 59.236 29.630 12.39 0.86 0.00 1.89
4546 5261 7.093354 TCAAACTGAACTGCAAAAACATGTTA 58.907 30.769 12.39 0.00 0.00 2.41
4547 5262 5.931146 TCAAACTGAACTGCAAAAACATGTT 59.069 32.000 4.92 4.92 0.00 2.71
4548 5263 5.477510 TCAAACTGAACTGCAAAAACATGT 58.522 33.333 0.00 0.00 0.00 3.21
4549 5264 6.406093 TTCAAACTGAACTGCAAAAACATG 57.594 33.333 0.00 0.00 30.26 3.21
4575 5290 9.688091 TCATCTACTCTCTCTGTAAACTAATGT 57.312 33.333 0.00 0.00 0.00 2.71
4579 5294 9.781633 GGTATCATCTACTCTCTCTGTAAACTA 57.218 37.037 0.00 0.00 0.00 2.24
4580 5295 7.722285 GGGTATCATCTACTCTCTCTGTAAACT 59.278 40.741 0.00 0.00 0.00 2.66
4581 5296 7.040271 GGGGTATCATCTACTCTCTCTGTAAAC 60.040 44.444 0.00 0.00 0.00 2.01
4582 5297 7.005296 GGGGTATCATCTACTCTCTCTGTAAA 58.995 42.308 0.00 0.00 0.00 2.01
4583 5298 6.544650 GGGGTATCATCTACTCTCTCTGTAA 58.455 44.000 0.00 0.00 0.00 2.41
4584 5299 5.280062 CGGGGTATCATCTACTCTCTCTGTA 60.280 48.000 0.00 0.00 0.00 2.74
4585 5300 4.505918 CGGGGTATCATCTACTCTCTCTGT 60.506 50.000 0.00 0.00 0.00 3.41
4586 5301 4.006989 CGGGGTATCATCTACTCTCTCTG 58.993 52.174 0.00 0.00 0.00 3.35
4587 5302 3.560453 GCGGGGTATCATCTACTCTCTCT 60.560 52.174 0.00 0.00 0.00 3.10
4588 5303 2.750712 GCGGGGTATCATCTACTCTCTC 59.249 54.545 0.00 0.00 0.00 3.20
4589 5304 2.108425 TGCGGGGTATCATCTACTCTCT 59.892 50.000 0.00 0.00 0.00 3.10
4590 5305 2.229302 GTGCGGGGTATCATCTACTCTC 59.771 54.545 0.00 0.00 0.00 3.20
4591 5306 2.240279 GTGCGGGGTATCATCTACTCT 58.760 52.381 0.00 0.00 0.00 3.24
4592 5307 1.068472 CGTGCGGGGTATCATCTACTC 60.068 57.143 0.00 0.00 0.00 2.59
4593 5308 0.959553 CGTGCGGGGTATCATCTACT 59.040 55.000 0.00 0.00 0.00 2.57
4594 5309 0.672342 ACGTGCGGGGTATCATCTAC 59.328 55.000 0.00 0.00 0.00 2.59
4595 5310 1.067974 CAACGTGCGGGGTATCATCTA 59.932 52.381 0.00 0.00 0.00 1.98
4596 5311 0.179084 CAACGTGCGGGGTATCATCT 60.179 55.000 0.00 0.00 0.00 2.90
4597 5312 0.461339 ACAACGTGCGGGGTATCATC 60.461 55.000 0.00 0.00 0.00 2.92
4598 5313 0.035820 AACAACGTGCGGGGTATCAT 60.036 50.000 0.00 0.00 0.00 2.45
4599 5314 0.951525 CAACAACGTGCGGGGTATCA 60.952 55.000 0.00 0.00 0.00 2.15
4600 5315 1.791662 CAACAACGTGCGGGGTATC 59.208 57.895 0.00 0.00 0.00 2.24
4601 5316 2.329614 GCAACAACGTGCGGGGTAT 61.330 57.895 0.00 0.00 34.21 2.73
4602 5317 2.973600 GCAACAACGTGCGGGGTA 60.974 61.111 0.00 0.00 34.21 3.69
4608 5323 2.817538 ATATTACCGCAACAACGTGC 57.182 45.000 0.00 0.00 41.32 5.34
4609 5324 4.965062 AGAAATATTACCGCAACAACGTG 58.035 39.130 0.00 0.00 0.00 4.49
4610 5325 6.724694 TTAGAAATATTACCGCAACAACGT 57.275 33.333 0.00 0.00 0.00 3.99
4635 5350 8.199449 CCATGCAACCAATTCTCAGTTAAATAT 58.801 33.333 0.00 0.00 0.00 1.28
4636 5351 7.395772 TCCATGCAACCAATTCTCAGTTAAATA 59.604 33.333 0.00 0.00 0.00 1.40
4637 5352 6.211184 TCCATGCAACCAATTCTCAGTTAAAT 59.789 34.615 0.00 0.00 0.00 1.40
4638 5353 5.538053 TCCATGCAACCAATTCTCAGTTAAA 59.462 36.000 0.00 0.00 0.00 1.52
4639 5354 5.076182 TCCATGCAACCAATTCTCAGTTAA 58.924 37.500 0.00 0.00 0.00 2.01
4640 5355 4.661222 TCCATGCAACCAATTCTCAGTTA 58.339 39.130 0.00 0.00 0.00 2.24
4641 5356 3.499338 TCCATGCAACCAATTCTCAGTT 58.501 40.909 0.00 0.00 0.00 3.16
4642 5357 3.159213 TCCATGCAACCAATTCTCAGT 57.841 42.857 0.00 0.00 0.00 3.41
4643 5358 3.256383 TGTTCCATGCAACCAATTCTCAG 59.744 43.478 0.00 0.00 0.00 3.35
4644 5359 3.229293 TGTTCCATGCAACCAATTCTCA 58.771 40.909 0.00 0.00 0.00 3.27
4645 5360 3.940209 TGTTCCATGCAACCAATTCTC 57.060 42.857 0.00 0.00 0.00 2.87
4646 5361 3.833650 TCATGTTCCATGCAACCAATTCT 59.166 39.130 0.00 0.00 0.00 2.40
4647 5362 4.191033 TCATGTTCCATGCAACCAATTC 57.809 40.909 0.00 0.00 0.00 2.17
4648 5363 4.620589 TTCATGTTCCATGCAACCAATT 57.379 36.364 0.00 0.00 0.00 2.32
4649 5364 4.829872 ATTCATGTTCCATGCAACCAAT 57.170 36.364 0.00 0.00 0.00 3.16
4650 5365 5.936187 ATATTCATGTTCCATGCAACCAA 57.064 34.783 0.00 0.00 0.00 3.67
4651 5366 5.936187 AATATTCATGTTCCATGCAACCA 57.064 34.783 0.00 0.00 0.00 3.67
4652 5367 5.524646 CCAAATATTCATGTTCCATGCAACC 59.475 40.000 0.00 0.00 0.00 3.77
4653 5368 6.339730 TCCAAATATTCATGTTCCATGCAAC 58.660 36.000 0.00 0.00 0.00 4.17
4654 5369 6.154877 ACTCCAAATATTCATGTTCCATGCAA 59.845 34.615 0.00 0.00 0.00 4.08
4655 5370 5.657745 ACTCCAAATATTCATGTTCCATGCA 59.342 36.000 0.00 0.00 0.00 3.96
4656 5371 6.152932 ACTCCAAATATTCATGTTCCATGC 57.847 37.500 0.00 0.00 0.00 4.06
4774 5489 8.584157 AGAACATACAACCATGCATAAGAAAAA 58.416 29.630 0.00 0.00 0.00 1.94
4775 5490 8.028354 CAGAACATACAACCATGCATAAGAAAA 58.972 33.333 0.00 0.00 0.00 2.29
4776 5491 7.362834 CCAGAACATACAACCATGCATAAGAAA 60.363 37.037 0.00 0.00 0.00 2.52
4777 5492 6.095300 CCAGAACATACAACCATGCATAAGAA 59.905 38.462 0.00 0.00 0.00 2.52
4778 5493 5.589855 CCAGAACATACAACCATGCATAAGA 59.410 40.000 0.00 0.00 0.00 2.10
4779 5494 5.357878 ACCAGAACATACAACCATGCATAAG 59.642 40.000 0.00 0.00 0.00 1.73
4780 5495 5.125257 CACCAGAACATACAACCATGCATAA 59.875 40.000 0.00 0.00 0.00 1.90
4781 5496 4.639755 CACCAGAACATACAACCATGCATA 59.360 41.667 0.00 0.00 0.00 3.14
4782 5497 3.444742 CACCAGAACATACAACCATGCAT 59.555 43.478 0.00 0.00 0.00 3.96
4783 5498 2.819019 CACCAGAACATACAACCATGCA 59.181 45.455 0.00 0.00 0.00 3.96
4784 5499 2.415893 GCACCAGAACATACAACCATGC 60.416 50.000 0.00 0.00 0.00 4.06
4785 5500 2.164219 GGCACCAGAACATACAACCATG 59.836 50.000 0.00 0.00 0.00 3.66
4786 5501 2.041620 AGGCACCAGAACATACAACCAT 59.958 45.455 0.00 0.00 0.00 3.55
4787 5502 1.423541 AGGCACCAGAACATACAACCA 59.576 47.619 0.00 0.00 0.00 3.67
4788 5503 2.200373 AGGCACCAGAACATACAACC 57.800 50.000 0.00 0.00 0.00 3.77
4789 5504 4.584327 AAAAGGCACCAGAACATACAAC 57.416 40.909 0.00 0.00 0.00 3.32
4808 5523 6.592220 CCTCATCATTCAACATGCATGAAAAA 59.408 34.615 32.75 20.91 39.98 1.94
4809 5524 6.103330 CCTCATCATTCAACATGCATGAAAA 58.897 36.000 32.75 21.24 39.98 2.29
4810 5525 5.186215 ACCTCATCATTCAACATGCATGAAA 59.814 36.000 32.75 21.57 39.98 2.69
4811 5526 4.707934 ACCTCATCATTCAACATGCATGAA 59.292 37.500 32.75 18.21 34.00 2.57
4812 5527 4.097286 CACCTCATCATTCAACATGCATGA 59.903 41.667 32.75 11.13 34.74 3.07
4813 5528 4.097286 TCACCTCATCATTCAACATGCATG 59.903 41.667 25.09 25.09 0.00 4.06
4814 5529 4.097437 GTCACCTCATCATTCAACATGCAT 59.903 41.667 0.00 0.00 0.00 3.96
4815 5530 3.441222 GTCACCTCATCATTCAACATGCA 59.559 43.478 0.00 0.00 0.00 3.96
4816 5531 3.441222 TGTCACCTCATCATTCAACATGC 59.559 43.478 0.00 0.00 0.00 4.06
4817 5532 5.830000 ATGTCACCTCATCATTCAACATG 57.170 39.130 0.00 0.00 0.00 3.21
4818 5533 6.185511 AGAATGTCACCTCATCATTCAACAT 58.814 36.000 15.91 0.00 45.39 2.71
4819 5534 5.563592 AGAATGTCACCTCATCATTCAACA 58.436 37.500 15.91 0.00 45.39 3.33
4820 5535 6.404074 GGAAGAATGTCACCTCATCATTCAAC 60.404 42.308 15.91 10.37 45.39 3.18
4821 5536 5.649395 GGAAGAATGTCACCTCATCATTCAA 59.351 40.000 15.91 0.00 45.39 2.69
4822 5537 5.188434 GGAAGAATGTCACCTCATCATTCA 58.812 41.667 15.91 0.00 45.39 2.57
4823 5538 5.188434 TGGAAGAATGTCACCTCATCATTC 58.812 41.667 8.47 8.47 44.16 2.67
4824 5539 5.183530 TGGAAGAATGTCACCTCATCATT 57.816 39.130 0.00 0.00 35.00 2.57
4825 5540 4.849813 TGGAAGAATGTCACCTCATCAT 57.150 40.909 0.00 0.00 0.00 2.45
4826 5541 4.520179 CATGGAAGAATGTCACCTCATCA 58.480 43.478 0.00 0.00 0.00 3.07
4827 5542 3.314635 GCATGGAAGAATGTCACCTCATC 59.685 47.826 0.00 0.00 0.00 2.92
4828 5543 3.053842 AGCATGGAAGAATGTCACCTCAT 60.054 43.478 0.00 0.00 0.00 2.90
4829 5544 2.306805 AGCATGGAAGAATGTCACCTCA 59.693 45.455 0.00 0.00 0.00 3.86
4830 5545 2.681848 CAGCATGGAAGAATGTCACCTC 59.318 50.000 0.00 0.00 0.00 3.85
4831 5546 2.306805 TCAGCATGGAAGAATGTCACCT 59.693 45.455 0.00 0.00 36.16 4.00
4832 5547 2.681848 CTCAGCATGGAAGAATGTCACC 59.318 50.000 0.00 0.00 36.16 4.02
4833 5548 3.603532 TCTCAGCATGGAAGAATGTCAC 58.396 45.455 0.00 0.00 36.16 3.67
4834 5549 3.516700 TCTCTCAGCATGGAAGAATGTCA 59.483 43.478 0.00 0.00 36.16 3.58
4835 5550 4.134379 TCTCTCAGCATGGAAGAATGTC 57.866 45.455 0.00 0.00 36.16 3.06
4836 5551 4.564782 TTCTCTCAGCATGGAAGAATGT 57.435 40.909 0.00 0.00 33.96 2.71
4837 5552 7.282675 ACTTATTTCTCTCAGCATGGAAGAATG 59.717 37.037 0.00 0.00 37.07 2.67
4838 5553 7.344913 ACTTATTTCTCTCAGCATGGAAGAAT 58.655 34.615 0.00 0.00 37.07 2.40
4839 5554 6.715280 ACTTATTTCTCTCAGCATGGAAGAA 58.285 36.000 0.00 0.00 36.00 2.52
4840 5555 6.305272 ACTTATTTCTCTCAGCATGGAAGA 57.695 37.500 0.00 0.00 36.16 2.87
4841 5556 6.183360 CCAACTTATTTCTCTCAGCATGGAAG 60.183 42.308 0.00 0.00 36.16 3.46
4842 5557 5.649395 CCAACTTATTTCTCTCAGCATGGAA 59.351 40.000 0.00 0.00 36.16 3.53
4843 5558 5.188434 CCAACTTATTTCTCTCAGCATGGA 58.812 41.667 0.00 0.00 36.16 3.41
4844 5559 4.946157 ACCAACTTATTTCTCTCAGCATGG 59.054 41.667 0.00 0.00 36.16 3.66
4845 5560 5.163683 CCACCAACTTATTTCTCTCAGCATG 60.164 44.000 0.00 0.00 37.54 4.06
4846 5561 4.946157 CCACCAACTTATTTCTCTCAGCAT 59.054 41.667 0.00 0.00 0.00 3.79
4847 5562 4.326826 CCACCAACTTATTTCTCTCAGCA 58.673 43.478 0.00 0.00 0.00 4.41
4848 5563 3.691609 CCCACCAACTTATTTCTCTCAGC 59.308 47.826 0.00 0.00 0.00 4.26
4849 5564 4.265073 CCCCACCAACTTATTTCTCTCAG 58.735 47.826 0.00 0.00 0.00 3.35
4850 5565 3.010138 CCCCCACCAACTTATTTCTCTCA 59.990 47.826 0.00 0.00 0.00 3.27
4851 5566 3.621558 CCCCCACCAACTTATTTCTCTC 58.378 50.000 0.00 0.00 0.00 3.20
4852 5567 2.291605 GCCCCCACCAACTTATTTCTCT 60.292 50.000 0.00 0.00 0.00 3.10
4853 5568 2.100197 GCCCCCACCAACTTATTTCTC 58.900 52.381 0.00 0.00 0.00 2.87
4854 5569 1.716503 AGCCCCCACCAACTTATTTCT 59.283 47.619 0.00 0.00 0.00 2.52
4855 5570 2.231716 AGCCCCCACCAACTTATTTC 57.768 50.000 0.00 0.00 0.00 2.17
4856 5571 3.076937 AGTTAGCCCCCACCAACTTATTT 59.923 43.478 0.00 0.00 0.00 1.40
4857 5572 2.652857 AGTTAGCCCCCACCAACTTATT 59.347 45.455 0.00 0.00 0.00 1.40
4858 5573 2.284770 AGTTAGCCCCCACCAACTTAT 58.715 47.619 0.00 0.00 0.00 1.73
4859 5574 1.750022 AGTTAGCCCCCACCAACTTA 58.250 50.000 0.00 0.00 0.00 2.24
4860 5575 1.750022 TAGTTAGCCCCCACCAACTT 58.250 50.000 0.00 0.00 33.47 2.66
4861 5576 1.981259 ATAGTTAGCCCCCACCAACT 58.019 50.000 0.00 0.00 35.50 3.16
4862 5577 2.820728 AATAGTTAGCCCCCACCAAC 57.179 50.000 0.00 0.00 0.00 3.77
4863 5578 4.113085 TCTAAATAGTTAGCCCCCACCAA 58.887 43.478 5.06 0.00 37.27 3.67
4864 5579 3.738434 TCTAAATAGTTAGCCCCCACCA 58.262 45.455 5.06 0.00 37.27 4.17
4865 5580 4.995624 ATCTAAATAGTTAGCCCCCACC 57.004 45.455 5.06 0.00 37.27 4.61
4866 5581 8.605325 TCTATATCTAAATAGTTAGCCCCCAC 57.395 38.462 5.06 0.00 37.27 4.61
4867 5582 9.624037 TTTCTATATCTAAATAGTTAGCCCCCA 57.376 33.333 5.06 0.00 37.27 4.96
4888 5603 9.862149 GGGTAATGGAGGAAATAAATCTTTCTA 57.138 33.333 0.00 0.00 35.81 2.10
4889 5604 8.343787 TGGGTAATGGAGGAAATAAATCTTTCT 58.656 33.333 0.00 0.00 35.81 2.52
4890 5605 8.414003 GTGGGTAATGGAGGAAATAAATCTTTC 58.586 37.037 0.00 0.00 34.95 2.62
4891 5606 8.122481 AGTGGGTAATGGAGGAAATAAATCTTT 58.878 33.333 0.00 0.00 0.00 2.52
4892 5607 7.652554 AGTGGGTAATGGAGGAAATAAATCTT 58.347 34.615 0.00 0.00 0.00 2.40
4893 5608 7.226059 AGTGGGTAATGGAGGAAATAAATCT 57.774 36.000 0.00 0.00 0.00 2.40
4894 5609 7.898014 AAGTGGGTAATGGAGGAAATAAATC 57.102 36.000 0.00 0.00 0.00 2.17
4895 5610 8.679344 AAAAGTGGGTAATGGAGGAAATAAAT 57.321 30.769 0.00 0.00 0.00 1.40
4896 5611 8.371699 CAAAAAGTGGGTAATGGAGGAAATAAA 58.628 33.333 0.00 0.00 0.00 1.40
4897 5612 7.730784 TCAAAAAGTGGGTAATGGAGGAAATAA 59.269 33.333 0.00 0.00 0.00 1.40
4898 5613 7.242359 TCAAAAAGTGGGTAATGGAGGAAATA 58.758 34.615 0.00 0.00 0.00 1.40
4899 5614 6.081356 TCAAAAAGTGGGTAATGGAGGAAAT 58.919 36.000 0.00 0.00 0.00 2.17
4900 5615 5.459505 TCAAAAAGTGGGTAATGGAGGAAA 58.540 37.500 0.00 0.00 0.00 3.13
4901 5616 5.068215 TCAAAAAGTGGGTAATGGAGGAA 57.932 39.130 0.00 0.00 0.00 3.36
4902 5617 4.733077 TCAAAAAGTGGGTAATGGAGGA 57.267 40.909 0.00 0.00 0.00 3.71
4903 5618 5.538433 TCTTTCAAAAAGTGGGTAATGGAGG 59.462 40.000 0.00 0.00 0.00 4.30
4904 5619 6.648879 TCTTTCAAAAAGTGGGTAATGGAG 57.351 37.500 0.00 0.00 0.00 3.86
4905 5620 7.010160 AGATCTTTCAAAAAGTGGGTAATGGA 58.990 34.615 0.00 0.00 0.00 3.41
4906 5621 7.232118 AGATCTTTCAAAAAGTGGGTAATGG 57.768 36.000 0.00 0.00 0.00 3.16
4907 5622 8.359642 TCAAGATCTTTCAAAAAGTGGGTAATG 58.640 33.333 4.86 0.00 0.00 1.90
4908 5623 8.477419 TCAAGATCTTTCAAAAAGTGGGTAAT 57.523 30.769 4.86 0.00 0.00 1.89
4909 5624 7.889873 TCAAGATCTTTCAAAAAGTGGGTAA 57.110 32.000 4.86 0.00 0.00 2.85
4910 5625 7.889873 TTCAAGATCTTTCAAAAAGTGGGTA 57.110 32.000 4.86 0.00 0.00 3.69
4911 5626 6.790232 TTCAAGATCTTTCAAAAAGTGGGT 57.210 33.333 4.86 0.00 0.00 4.51
4912 5627 7.765819 AGTTTTCAAGATCTTTCAAAAAGTGGG 59.234 33.333 17.82 0.70 0.00 4.61
4913 5628 8.707938 AGTTTTCAAGATCTTTCAAAAAGTGG 57.292 30.769 17.82 1.12 0.00 4.00
4960 5675 9.002600 CCACTCCAATCGAATATTGAATAATCA 57.997 33.333 0.00 0.00 0.00 2.57
4961 5676 9.219603 TCCACTCCAATCGAATATTGAATAATC 57.780 33.333 0.00 0.00 0.00 1.75
4962 5677 9.745018 ATCCACTCCAATCGAATATTGAATAAT 57.255 29.630 0.00 0.00 0.00 1.28
4963 5678 9.573166 AATCCACTCCAATCGAATATTGAATAA 57.427 29.630 0.00 0.00 0.00 1.40
4964 5679 9.219603 GAATCCACTCCAATCGAATATTGAATA 57.780 33.333 0.00 0.00 0.00 1.75
4965 5680 7.720957 TGAATCCACTCCAATCGAATATTGAAT 59.279 33.333 0.00 0.00 0.00 2.57
4966 5681 7.012327 GTGAATCCACTCCAATCGAATATTGAA 59.988 37.037 0.00 0.00 40.10 2.69
4967 5682 6.483307 GTGAATCCACTCCAATCGAATATTGA 59.517 38.462 0.00 0.00 40.10 2.57
4968 5683 6.260714 TGTGAATCCACTCCAATCGAATATTG 59.739 38.462 0.00 0.00 43.55 1.90
4969 5684 6.356556 TGTGAATCCACTCCAATCGAATATT 58.643 36.000 0.00 0.00 43.55 1.28
4970 5685 5.928976 TGTGAATCCACTCCAATCGAATAT 58.071 37.500 0.00 0.00 43.55 1.28
4971 5686 5.351948 TGTGAATCCACTCCAATCGAATA 57.648 39.130 0.00 0.00 43.55 1.75
4972 5687 4.220693 TGTGAATCCACTCCAATCGAAT 57.779 40.909 0.00 0.00 43.55 3.34
4973 5688 3.694043 TGTGAATCCACTCCAATCGAA 57.306 42.857 0.00 0.00 43.55 3.71
4974 5689 3.694043 TTGTGAATCCACTCCAATCGA 57.306 42.857 0.00 0.00 43.55 3.59
4975 5690 6.624352 ATTATTGTGAATCCACTCCAATCG 57.376 37.500 0.00 0.00 43.55 3.34
4976 5691 7.999679 TGAATTATTGTGAATCCACTCCAATC 58.000 34.615 0.00 0.00 43.55 2.67
4977 5692 7.959658 TGAATTATTGTGAATCCACTCCAAT 57.040 32.000 0.00 0.00 43.55 3.16
4978 5693 7.773489 TTGAATTATTGTGAATCCACTCCAA 57.227 32.000 0.00 0.00 43.55 3.53
4979 5694 7.773489 TTTGAATTATTGTGAATCCACTCCA 57.227 32.000 0.00 0.00 43.55 3.86
4980 5695 8.522830 TCTTTTGAATTATTGTGAATCCACTCC 58.477 33.333 0.00 0.00 43.55 3.85
4981 5696 9.912634 TTCTTTTGAATTATTGTGAATCCACTC 57.087 29.630 0.00 0.00 37.57 3.51
5054 5769 9.970395 CTGCATGTTTATAAAATCATATGGTGT 57.030 29.630 2.13 0.00 0.00 4.16
5055 5770 9.970395 ACTGCATGTTTATAAAATCATATGGTG 57.030 29.630 2.13 0.00 0.00 4.17
5065 5780 8.871862 GCAATTGATGACTGCATGTTTATAAAA 58.128 29.630 10.34 0.00 36.09 1.52
5066 5781 8.252417 AGCAATTGATGACTGCATGTTTATAAA 58.748 29.630 10.34 0.00 38.58 1.40
5067 5782 7.703197 CAGCAATTGATGACTGCATGTTTATAA 59.297 33.333 18.79 0.00 38.58 0.98
5068 5783 7.197703 CAGCAATTGATGACTGCATGTTTATA 58.802 34.615 18.79 0.00 38.58 0.98
5069 5784 6.040247 CAGCAATTGATGACTGCATGTTTAT 58.960 36.000 18.79 0.00 38.58 1.40
5070 5785 5.404096 CAGCAATTGATGACTGCATGTTTA 58.596 37.500 18.79 0.00 38.58 2.01
5071 5786 4.242475 CAGCAATTGATGACTGCATGTTT 58.758 39.130 18.79 0.00 38.58 2.83
5072 5787 3.368013 CCAGCAATTGATGACTGCATGTT 60.368 43.478 24.73 0.00 38.58 2.71
5073 5788 2.165641 CCAGCAATTGATGACTGCATGT 59.834 45.455 24.73 0.00 38.58 3.21
5074 5789 2.425668 TCCAGCAATTGATGACTGCATG 59.574 45.455 24.73 6.41 38.58 4.06
5075 5790 2.426024 GTCCAGCAATTGATGACTGCAT 59.574 45.455 24.73 0.00 38.58 3.96
5076 5791 1.814394 GTCCAGCAATTGATGACTGCA 59.186 47.619 24.73 0.00 38.58 4.41
5077 5792 1.814394 TGTCCAGCAATTGATGACTGC 59.186 47.619 24.73 11.49 34.10 4.40
5078 5793 3.692593 TCATGTCCAGCAATTGATGACTG 59.307 43.478 24.73 13.60 32.25 3.51
5079 5794 3.959293 TCATGTCCAGCAATTGATGACT 58.041 40.909 24.73 1.12 32.25 3.41
5080 5795 4.707030 TTCATGTCCAGCAATTGATGAC 57.293 40.909 24.73 18.99 32.25 3.06
5081 5796 5.725325 TTTTCATGTCCAGCAATTGATGA 57.275 34.783 24.73 12.49 32.25 2.92
5103 5818 9.413048 CGTTTACAATGGTTACCATATGTTTTT 57.587 29.630 25.25 7.64 44.40 1.94
5104 5819 8.794553 TCGTTTACAATGGTTACCATATGTTTT 58.205 29.630 25.25 8.24 44.40 2.43
5105 5820 8.238631 GTCGTTTACAATGGTTACCATATGTTT 58.761 33.333 25.25 8.84 44.40 2.83
5106 5821 7.608761 AGTCGTTTACAATGGTTACCATATGTT 59.391 33.333 25.25 9.15 44.40 2.71
5107 5822 7.065324 CAGTCGTTTACAATGGTTACCATATGT 59.935 37.037 24.26 24.26 44.40 2.29
5108 5823 7.406553 CAGTCGTTTACAATGGTTACCATATG 58.593 38.462 18.07 18.16 44.40 1.78
5109 5824 6.037830 GCAGTCGTTTACAATGGTTACCATAT 59.962 38.462 18.07 11.40 44.40 1.78
5110 5825 5.352016 GCAGTCGTTTACAATGGTTACCATA 59.648 40.000 18.07 0.00 44.40 2.74
5112 5827 3.499157 GCAGTCGTTTACAATGGTTACCA 59.501 43.478 6.53 6.53 38.19 3.25
5113 5828 3.120095 GGCAGTCGTTTACAATGGTTACC 60.120 47.826 0.00 0.00 0.00 2.85
5114 5829 3.120095 GGGCAGTCGTTTACAATGGTTAC 60.120 47.826 0.00 0.00 0.00 2.50
5115 5830 3.075884 GGGCAGTCGTTTACAATGGTTA 58.924 45.455 0.00 0.00 0.00 2.85
5116 5831 1.883926 GGGCAGTCGTTTACAATGGTT 59.116 47.619 0.00 0.00 0.00 3.67
5117 5832 1.530323 GGGCAGTCGTTTACAATGGT 58.470 50.000 0.00 0.00 0.00 3.55
5118 5833 0.808755 GGGGCAGTCGTTTACAATGG 59.191 55.000 0.00 0.00 0.00 3.16
5119 5834 0.446222 CGGGGCAGTCGTTTACAATG 59.554 55.000 0.00 0.00 0.00 2.82
5120 5835 0.322322 TCGGGGCAGTCGTTTACAAT 59.678 50.000 0.00 0.00 0.00 2.71
5121 5836 0.600782 GTCGGGGCAGTCGTTTACAA 60.601 55.000 0.00 0.00 0.00 2.41
5122 5837 1.005867 GTCGGGGCAGTCGTTTACA 60.006 57.895 0.00 0.00 0.00 2.41
5123 5838 1.739196 GGTCGGGGCAGTCGTTTAC 60.739 63.158 0.00 0.00 0.00 2.01
5124 5839 2.658422 GGTCGGGGCAGTCGTTTA 59.342 61.111 0.00 0.00 0.00 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.