Multiple sequence alignment - TraesCS2B01G224500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G224500 chr2B 100.000 5218 0 0 1 5218 214380003 214374786 0.000000e+00 9636.0
1 TraesCS2B01G224500 chr2B 97.154 492 14 0 1 492 19460260 19459769 0.000000e+00 832.0
2 TraesCS2B01G224500 chr2B 98.182 165 3 0 1756 1920 793708293 793708457 6.610000e-74 289.0
3 TraesCS2B01G224500 chr2A 93.260 2923 85 27 1925 4823 166757074 166754240 0.000000e+00 4204.0
4 TraesCS2B01G224500 chr2A 92.727 1155 64 12 591 1735 166758251 166757107 0.000000e+00 1650.0
5 TraesCS2B01G224500 chr2A 88.562 306 9 8 4894 5189 166753547 166753258 1.080000e-91 348.0
6 TraesCS2B01G224500 chr2D 95.365 2524 83 12 2253 4757 156826799 156824291 0.000000e+00 3982.0
7 TraesCS2B01G224500 chr2D 94.378 1263 45 14 493 1735 156828417 156827161 0.000000e+00 1916.0
8 TraesCS2B01G224500 chr2D 94.395 446 22 3 4721 5163 156824291 156823846 0.000000e+00 682.0
9 TraesCS2B01G224500 chr2D 94.144 222 4 4 2017 2237 156826997 156826784 3.900000e-86 329.0
10 TraesCS2B01G224500 chr2D 100.000 35 0 0 5155 5189 156823843 156823809 1.210000e-06 65.8
11 TraesCS2B01G224500 chr2D 100.000 29 0 0 5190 5218 184120868 184120840 3.000000e-03 54.7
12 TraesCS2B01G224500 chr1B 98.798 499 4 2 1 497 296749261 296748763 0.000000e+00 887.0
13 TraesCS2B01G224500 chr1B 97.154 492 14 0 1 492 35942024 35942515 0.000000e+00 832.0
14 TraesCS2B01G224500 chr5B 97.976 494 10 0 1 494 360425152 360425645 0.000000e+00 857.0
15 TraesCS2B01G224500 chr5B 97.059 170 5 0 1757 1926 145828344 145828175 2.380000e-73 287.0
16 TraesCS2B01G224500 chr7B 97.967 492 9 1 1 492 746923935 746923445 0.000000e+00 852.0
17 TraesCS2B01G224500 chr7B 97.059 170 4 1 1754 1922 399799090 399799259 8.550000e-73 285.0
18 TraesCS2B01G224500 chr7B 96.491 171 5 1 1757 1927 697802576 697802745 1.110000e-71 281.0
19 TraesCS2B01G224500 chrUn 97.561 492 12 0 1 492 381264784 381265275 0.000000e+00 843.0
20 TraesCS2B01G224500 chr4B 97.561 492 12 0 1 492 567592704 567592213 0.000000e+00 843.0
21 TraesCS2B01G224500 chr4B 94.505 182 6 4 1746 1926 461850259 461850081 1.430000e-70 278.0
22 TraesCS2B01G224500 chr4A 97.561 492 12 0 1 492 714830030 714830521 0.000000e+00 843.0
23 TraesCS2B01G224500 chr4A 97.006 167 5 0 1754 1920 743957165 743957331 1.110000e-71 281.0
24 TraesCS2B01G224500 chr3B 97.149 491 14 0 2 492 75731637 75732127 0.000000e+00 830.0
25 TraesCS2B01G224500 chr3D 98.795 166 2 0 1754 1919 596058972 596059137 3.950000e-76 296.0
26 TraesCS2B01G224500 chr6D 98.204 167 2 1 1757 1923 447248794 447248959 1.840000e-74 291.0
27 TraesCS2B01G224500 chr6B 97.059 170 5 0 1757 1926 468734817 468734648 2.380000e-73 287.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G224500 chr2B 214374786 214380003 5217 True 9636.000000 9636 100.000000 1 5218 1 chr2B.!!$R2 5217
1 TraesCS2B01G224500 chr2A 166753258 166758251 4993 True 2067.333333 4204 91.516333 591 5189 3 chr2A.!!$R1 4598
2 TraesCS2B01G224500 chr2D 156823809 156828417 4608 True 1394.960000 3982 95.656400 493 5189 5 chr2D.!!$R2 4696

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
168 169 0.026803 GCACGTGGAGATCGATTTGC 59.973 55.000 18.88 0.0 0.00 3.68 F
224 225 0.033090 GGGTTCTTCACGTTCCGAGT 59.967 55.000 0.00 0.0 0.00 4.18 F
473 474 0.107606 TACAAGGCACCACAACGTGT 60.108 50.000 0.00 0.0 36.08 4.49 F
483 484 1.032657 CACAACGTGTGGTTTCCCCA 61.033 55.000 9.43 0.0 44.27 4.96 F
2304 2405 0.843309 TGAGGCTGTGGGTTTGAAGA 59.157 50.000 0.00 0.0 0.00 2.87 F
2307 2408 1.145738 AGGCTGTGGGTTTGAAGACAT 59.854 47.619 0.00 0.0 0.00 3.06 F
3510 3629 0.039527 CCGCAAGCCAACCACTTTAC 60.040 55.000 0.00 0.0 0.00 2.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1854 1887 1.108776 GGTGGACTACATACGGAGCA 58.891 55.000 0.00 0.00 0.00 4.26 R
1855 1888 1.400737 AGGTGGACTACATACGGAGC 58.599 55.000 0.00 0.00 0.00 4.70 R
2284 2385 1.202806 TCTTCAAACCCACAGCCTCAG 60.203 52.381 0.00 0.00 0.00 3.35 R
2321 2422 6.147821 AGCGGTTCTGATATTGTGCATATAAC 59.852 38.462 0.00 0.00 0.00 1.89 R
3259 3364 1.172180 CGGCATGTGGTTGTTCAGGT 61.172 55.000 0.00 0.00 0.00 4.00 R
3988 4112 1.215244 CGCAGACTGGATGCAGTATG 58.785 55.000 30.68 30.68 44.54 2.39 R
4677 4803 0.321122 GAGGCCATAATCCCAGCTCG 60.321 60.000 5.01 0.00 0.00 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.800096 GCAGTTGCAAATGTCGTGG 58.200 52.632 25.91 2.08 41.59 4.94
19 20 1.277495 GCAGTTGCAAATGTCGTGGC 61.277 55.000 25.91 8.69 41.59 5.01
20 21 0.311790 CAGTTGCAAATGTCGTGGCT 59.688 50.000 18.38 0.00 0.00 4.75
21 22 0.311790 AGTTGCAAATGTCGTGGCTG 59.688 50.000 0.00 0.00 0.00 4.85
22 23 0.310543 GTTGCAAATGTCGTGGCTGA 59.689 50.000 0.00 0.00 0.00 4.26
23 24 1.028130 TTGCAAATGTCGTGGCTGAA 58.972 45.000 0.00 0.00 0.00 3.02
24 25 1.028130 TGCAAATGTCGTGGCTGAAA 58.972 45.000 0.00 0.00 0.00 2.69
25 26 1.268999 TGCAAATGTCGTGGCTGAAAC 60.269 47.619 0.00 0.00 0.00 2.78
26 27 1.268999 GCAAATGTCGTGGCTGAAACA 60.269 47.619 0.00 0.00 0.00 2.83
27 28 2.607771 GCAAATGTCGTGGCTGAAACAT 60.608 45.455 0.00 0.00 33.92 2.71
28 29 2.981805 CAAATGTCGTGGCTGAAACATG 59.018 45.455 0.00 0.00 32.88 3.21
29 30 1.896220 ATGTCGTGGCTGAAACATGT 58.104 45.000 0.00 0.00 31.41 3.21
30 31 1.674359 TGTCGTGGCTGAAACATGTT 58.326 45.000 4.92 4.92 0.00 2.71
31 32 1.333308 TGTCGTGGCTGAAACATGTTG 59.667 47.619 12.82 0.48 0.00 3.33
32 33 0.950836 TCGTGGCTGAAACATGTTGG 59.049 50.000 12.82 6.95 0.00 3.77
33 34 0.667993 CGTGGCTGAAACATGTTGGT 59.332 50.000 12.82 0.00 0.00 3.67
34 35 1.066908 CGTGGCTGAAACATGTTGGTT 59.933 47.619 12.82 0.00 0.00 3.67
35 36 2.292016 CGTGGCTGAAACATGTTGGTTA 59.708 45.455 12.82 0.00 0.00 2.85
36 37 3.638484 GTGGCTGAAACATGTTGGTTAC 58.362 45.455 12.82 4.00 0.00 2.50
37 38 2.292016 TGGCTGAAACATGTTGGTTACG 59.708 45.455 12.82 0.00 0.00 3.18
38 39 2.351350 GGCTGAAACATGTTGGTTACGG 60.351 50.000 12.82 7.90 0.00 4.02
39 40 2.920647 GCTGAAACATGTTGGTTACGGC 60.921 50.000 12.82 13.33 0.00 5.68
40 41 2.292016 CTGAAACATGTTGGTTACGGCA 59.708 45.455 12.82 0.54 0.00 5.69
41 42 2.292016 TGAAACATGTTGGTTACGGCAG 59.708 45.455 12.82 0.00 0.00 4.85
42 43 0.596082 AACATGTTGGTTACGGCAGC 59.404 50.000 11.07 0.00 0.00 5.25
43 44 0.250727 ACATGTTGGTTACGGCAGCT 60.251 50.000 0.00 0.00 0.00 4.24
44 45 0.881118 CATGTTGGTTACGGCAGCTT 59.119 50.000 0.00 0.00 0.00 3.74
45 46 1.269448 CATGTTGGTTACGGCAGCTTT 59.731 47.619 0.00 0.00 0.00 3.51
46 47 1.394618 TGTTGGTTACGGCAGCTTTT 58.605 45.000 0.00 0.00 0.00 2.27
47 48 1.751924 TGTTGGTTACGGCAGCTTTTT 59.248 42.857 0.00 0.00 0.00 1.94
48 49 2.223618 TGTTGGTTACGGCAGCTTTTTC 60.224 45.455 0.00 0.00 0.00 2.29
49 50 1.681538 TGGTTACGGCAGCTTTTTCA 58.318 45.000 0.00 0.00 0.00 2.69
50 51 1.606668 TGGTTACGGCAGCTTTTTCAG 59.393 47.619 0.00 0.00 0.00 3.02
51 52 1.068541 GGTTACGGCAGCTTTTTCAGG 60.069 52.381 0.00 0.00 0.00 3.86
52 53 1.877443 GTTACGGCAGCTTTTTCAGGA 59.123 47.619 0.00 0.00 0.00 3.86
53 54 1.808411 TACGGCAGCTTTTTCAGGAG 58.192 50.000 0.00 0.00 0.00 3.69
54 55 1.211190 CGGCAGCTTTTTCAGGAGC 59.789 57.895 0.00 0.00 39.17 4.70
56 57 0.964700 GGCAGCTTTTTCAGGAGCTT 59.035 50.000 0.00 0.00 46.55 3.74
57 58 1.067985 GGCAGCTTTTTCAGGAGCTTC 60.068 52.381 0.00 0.00 46.55 3.86
58 59 1.610522 GCAGCTTTTTCAGGAGCTTCA 59.389 47.619 0.00 0.00 46.55 3.02
59 60 2.230750 GCAGCTTTTTCAGGAGCTTCAT 59.769 45.455 0.00 0.00 46.55 2.57
60 61 3.672781 GCAGCTTTTTCAGGAGCTTCATC 60.673 47.826 0.00 0.00 46.55 2.92
61 62 2.746362 AGCTTTTTCAGGAGCTTCATCG 59.254 45.455 0.00 0.00 46.55 3.84
62 63 2.744202 GCTTTTTCAGGAGCTTCATCGA 59.256 45.455 0.00 0.00 36.01 3.59
63 64 3.425492 GCTTTTTCAGGAGCTTCATCGAC 60.425 47.826 0.00 0.00 36.01 4.20
64 65 2.386661 TTTCAGGAGCTTCATCGACC 57.613 50.000 0.00 0.00 0.00 4.79
65 66 0.173481 TTCAGGAGCTTCATCGACCG 59.827 55.000 0.00 0.00 0.00 4.79
66 67 1.227089 CAGGAGCTTCATCGACCGG 60.227 63.158 0.00 0.00 0.00 5.28
67 68 1.682684 AGGAGCTTCATCGACCGGT 60.683 57.895 6.92 6.92 0.00 5.28
68 69 1.519455 GGAGCTTCATCGACCGGTG 60.519 63.158 14.63 4.45 0.00 4.94
69 70 1.511305 GAGCTTCATCGACCGGTGA 59.489 57.895 14.63 10.89 0.00 4.02
70 71 0.802607 GAGCTTCATCGACCGGTGAC 60.803 60.000 14.63 0.00 0.00 3.67
71 72 1.215647 GCTTCATCGACCGGTGACT 59.784 57.895 14.63 0.00 0.00 3.41
72 73 1.078759 GCTTCATCGACCGGTGACTG 61.079 60.000 14.63 6.14 0.00 3.51
73 74 0.458543 CTTCATCGACCGGTGACTGG 60.459 60.000 14.63 9.35 0.00 4.00
74 75 1.183030 TTCATCGACCGGTGACTGGT 61.183 55.000 17.52 17.52 39.41 4.00
75 76 1.446099 CATCGACCGGTGACTGGTG 60.446 63.158 22.89 13.23 37.36 4.17
76 77 3.296709 ATCGACCGGTGACTGGTGC 62.297 63.158 22.89 11.49 37.36 5.01
78 79 3.936203 GACCGGTGACTGGTGCCA 61.936 66.667 22.89 0.00 37.36 4.92
79 80 4.250305 ACCGGTGACTGGTGCCAC 62.250 66.667 16.71 0.00 36.20 5.01
80 81 3.941188 CCGGTGACTGGTGCCACT 61.941 66.667 1.22 0.00 33.99 4.00
81 82 2.666190 CGGTGACTGGTGCCACTG 60.666 66.667 0.00 0.00 33.99 3.66
82 83 2.510906 GGTGACTGGTGCCACTGT 59.489 61.111 0.00 0.00 33.99 3.55
83 84 1.893808 GGTGACTGGTGCCACTGTG 60.894 63.158 0.00 0.00 33.99 3.66
84 85 1.893808 GTGACTGGTGCCACTGTGG 60.894 63.158 22.46 22.46 41.55 4.17
85 86 2.374525 TGACTGGTGCCACTGTGGT 61.375 57.895 26.48 6.89 40.46 4.16
86 87 1.893808 GACTGGTGCCACTGTGGTG 60.894 63.158 26.48 14.32 40.46 4.17
87 88 2.192979 CTGGTGCCACTGTGGTGT 59.807 61.111 26.48 0.00 40.46 4.16
88 89 1.453745 CTGGTGCCACTGTGGTGTT 60.454 57.895 26.48 0.00 40.46 3.32
89 90 1.000270 TGGTGCCACTGTGGTGTTT 60.000 52.632 26.48 0.00 40.46 2.83
90 91 0.613292 TGGTGCCACTGTGGTGTTTT 60.613 50.000 26.48 0.00 40.46 2.43
91 92 0.179113 GGTGCCACTGTGGTGTTTTG 60.179 55.000 26.48 1.26 40.46 2.44
92 93 0.530288 GTGCCACTGTGGTGTTTTGT 59.470 50.000 26.48 0.00 40.46 2.83
93 94 0.529833 TGCCACTGTGGTGTTTTGTG 59.470 50.000 26.48 0.00 40.46 3.33
94 95 0.814457 GCCACTGTGGTGTTTTGTGA 59.186 50.000 26.48 0.00 40.46 3.58
95 96 1.408702 GCCACTGTGGTGTTTTGTGAT 59.591 47.619 26.48 0.00 40.46 3.06
96 97 2.621055 GCCACTGTGGTGTTTTGTGATA 59.379 45.455 26.48 0.00 40.46 2.15
97 98 3.067461 GCCACTGTGGTGTTTTGTGATAA 59.933 43.478 26.48 0.00 40.46 1.75
98 99 4.261994 GCCACTGTGGTGTTTTGTGATAAT 60.262 41.667 26.48 0.00 40.46 1.28
99 100 5.221880 CCACTGTGGTGTTTTGTGATAATG 58.778 41.667 18.76 0.00 41.53 1.90
100 101 5.221224 CCACTGTGGTGTTTTGTGATAATGT 60.221 40.000 18.76 0.00 41.53 2.71
101 102 5.686841 CACTGTGGTGTTTTGTGATAATGTG 59.313 40.000 0.00 0.00 38.54 3.21
102 103 5.592282 ACTGTGGTGTTTTGTGATAATGTGA 59.408 36.000 0.00 0.00 0.00 3.58
103 104 6.070897 TGTGGTGTTTTGTGATAATGTGAG 57.929 37.500 0.00 0.00 0.00 3.51
104 105 4.917415 GTGGTGTTTTGTGATAATGTGAGC 59.083 41.667 0.00 0.00 0.00 4.26
105 106 4.826733 TGGTGTTTTGTGATAATGTGAGCT 59.173 37.500 0.00 0.00 0.00 4.09
106 107 5.048782 TGGTGTTTTGTGATAATGTGAGCTC 60.049 40.000 6.82 6.82 0.00 4.09
107 108 5.182001 GGTGTTTTGTGATAATGTGAGCTCT 59.818 40.000 16.19 0.00 0.00 4.09
108 109 6.082338 GTGTTTTGTGATAATGTGAGCTCTG 58.918 40.000 16.19 0.00 0.00 3.35
109 110 5.764686 TGTTTTGTGATAATGTGAGCTCTGT 59.235 36.000 16.19 0.00 0.00 3.41
110 111 6.262944 TGTTTTGTGATAATGTGAGCTCTGTT 59.737 34.615 16.19 9.37 0.00 3.16
111 112 6.882610 TTTGTGATAATGTGAGCTCTGTTT 57.117 33.333 16.19 7.93 0.00 2.83
112 113 7.977789 TTTGTGATAATGTGAGCTCTGTTTA 57.022 32.000 16.19 9.83 0.00 2.01
113 114 6.968131 TGTGATAATGTGAGCTCTGTTTAC 57.032 37.500 16.19 4.65 0.00 2.01
114 115 6.463360 TGTGATAATGTGAGCTCTGTTTACA 58.537 36.000 16.19 10.78 0.00 2.41
115 116 7.105588 TGTGATAATGTGAGCTCTGTTTACAT 58.894 34.615 16.19 12.69 33.73 2.29
116 117 7.064966 TGTGATAATGTGAGCTCTGTTTACATG 59.935 37.037 16.19 0.00 32.75 3.21
117 118 7.278646 GTGATAATGTGAGCTCTGTTTACATGA 59.721 37.037 16.19 9.30 32.75 3.07
118 119 5.869753 AATGTGAGCTCTGTTTACATGAC 57.130 39.130 16.19 0.75 32.75 3.06
119 120 4.335400 TGTGAGCTCTGTTTACATGACA 57.665 40.909 16.19 3.64 0.00 3.58
120 121 4.058124 TGTGAGCTCTGTTTACATGACAC 58.942 43.478 16.19 0.70 0.00 3.67
121 122 4.058124 GTGAGCTCTGTTTACATGACACA 58.942 43.478 16.19 0.00 0.00 3.72
122 123 4.151335 GTGAGCTCTGTTTACATGACACAG 59.849 45.833 16.19 8.44 39.51 3.66
123 124 4.039124 TGAGCTCTGTTTACATGACACAGA 59.961 41.667 16.19 18.78 43.71 3.41
124 125 4.960938 AGCTCTGTTTACATGACACAGAA 58.039 39.130 19.71 9.69 44.88 3.02
125 126 5.555017 AGCTCTGTTTACATGACACAGAAT 58.445 37.500 19.71 12.62 44.88 2.40
126 127 5.641209 AGCTCTGTTTACATGACACAGAATC 59.359 40.000 19.71 15.75 44.88 2.52
127 128 5.163814 GCTCTGTTTACATGACACAGAATCC 60.164 44.000 19.71 11.73 44.88 3.01
128 129 5.245531 TCTGTTTACATGACACAGAATCCC 58.754 41.667 18.07 0.00 43.12 3.85
129 130 4.000325 TGTTTACATGACACAGAATCCCG 59.000 43.478 0.00 0.00 0.00 5.14
130 131 3.973206 TTACATGACACAGAATCCCGT 57.027 42.857 0.00 0.00 0.00 5.28
131 132 2.859165 ACATGACACAGAATCCCGTT 57.141 45.000 0.00 0.00 0.00 4.44
132 133 2.699954 ACATGACACAGAATCCCGTTC 58.300 47.619 0.00 0.00 37.08 3.95
133 134 2.038426 ACATGACACAGAATCCCGTTCA 59.962 45.455 0.00 0.00 39.39 3.18
134 135 3.273434 CATGACACAGAATCCCGTTCAT 58.727 45.455 0.00 0.00 39.39 2.57
135 136 2.972625 TGACACAGAATCCCGTTCATC 58.027 47.619 0.00 0.00 39.39 2.92
136 137 2.301583 TGACACAGAATCCCGTTCATCA 59.698 45.455 0.00 0.00 39.39 3.07
137 138 3.055167 TGACACAGAATCCCGTTCATCAT 60.055 43.478 0.00 0.00 39.39 2.45
138 139 3.535561 ACACAGAATCCCGTTCATCATC 58.464 45.455 0.00 0.00 39.39 2.92
139 140 3.055167 ACACAGAATCCCGTTCATCATCA 60.055 43.478 0.00 0.00 39.39 3.07
140 141 3.558829 CACAGAATCCCGTTCATCATCAG 59.441 47.826 0.00 0.00 39.39 2.90
141 142 2.547211 CAGAATCCCGTTCATCATCAGC 59.453 50.000 0.00 0.00 39.39 4.26
142 143 1.528586 GAATCCCGTTCATCATCAGCG 59.471 52.381 0.00 0.00 36.80 5.18
143 144 0.882042 ATCCCGTTCATCATCAGCGC 60.882 55.000 0.00 0.00 0.00 5.92
144 145 1.815003 CCCGTTCATCATCAGCGCA 60.815 57.895 11.47 0.00 0.00 6.09
145 146 1.349627 CCGTTCATCATCAGCGCAC 59.650 57.895 11.47 0.00 0.00 5.34
146 147 1.349627 CGTTCATCATCAGCGCACC 59.650 57.895 11.47 0.00 0.00 5.01
147 148 1.360931 CGTTCATCATCAGCGCACCA 61.361 55.000 11.47 0.00 0.00 4.17
148 149 0.804364 GTTCATCATCAGCGCACCAA 59.196 50.000 11.47 0.00 0.00 3.67
149 150 1.089112 TTCATCATCAGCGCACCAAG 58.911 50.000 11.47 0.00 0.00 3.61
150 151 1.063649 CATCATCAGCGCACCAAGC 59.936 57.895 11.47 0.00 40.87 4.01
151 152 1.377594 ATCATCAGCGCACCAAGCA 60.378 52.632 11.47 0.00 46.13 3.91
152 153 1.651240 ATCATCAGCGCACCAAGCAC 61.651 55.000 11.47 0.00 46.13 4.40
153 154 3.425713 ATCAGCGCACCAAGCACG 61.426 61.111 11.47 0.00 46.13 5.34
154 155 4.908687 TCAGCGCACCAAGCACGT 62.909 61.111 11.47 0.00 46.13 4.49
155 156 4.671549 CAGCGCACCAAGCACGTG 62.672 66.667 12.28 12.28 46.13 4.49
158 159 3.716006 CGCACCAAGCACGTGGAG 61.716 66.667 18.88 2.68 46.13 3.86
159 160 2.280797 GCACCAAGCACGTGGAGA 60.281 61.111 18.88 0.00 41.65 3.71
160 161 1.672356 GCACCAAGCACGTGGAGAT 60.672 57.895 18.88 0.00 41.65 2.75
161 162 1.639298 GCACCAAGCACGTGGAGATC 61.639 60.000 18.88 0.00 41.65 2.75
162 163 1.079819 ACCAAGCACGTGGAGATCG 60.080 57.895 18.88 0.00 41.65 3.69
163 164 1.215382 CCAAGCACGTGGAGATCGA 59.785 57.895 18.88 0.00 41.65 3.59
164 165 0.179100 CCAAGCACGTGGAGATCGAT 60.179 55.000 18.88 0.00 41.65 3.59
165 166 1.645034 CAAGCACGTGGAGATCGATT 58.355 50.000 18.88 0.00 0.00 3.34
166 167 2.002586 CAAGCACGTGGAGATCGATTT 58.997 47.619 18.88 0.00 0.00 2.17
167 168 1.645034 AGCACGTGGAGATCGATTTG 58.355 50.000 18.88 0.00 0.00 2.32
168 169 0.026803 GCACGTGGAGATCGATTTGC 59.973 55.000 18.88 0.00 0.00 3.68
169 170 1.358877 CACGTGGAGATCGATTTGCA 58.641 50.000 7.95 6.02 0.00 4.08
170 171 1.061131 CACGTGGAGATCGATTTGCAC 59.939 52.381 24.80 24.80 33.00 4.57
171 172 1.066858 ACGTGGAGATCGATTTGCACT 60.067 47.619 29.10 17.87 34.02 4.40
172 173 2.002586 CGTGGAGATCGATTTGCACTT 58.997 47.619 29.10 0.00 34.02 3.16
173 174 2.416547 CGTGGAGATCGATTTGCACTTT 59.583 45.455 29.10 0.00 34.02 2.66
174 175 3.725895 CGTGGAGATCGATTTGCACTTTG 60.726 47.826 29.10 15.85 34.02 2.77
175 176 3.189287 GTGGAGATCGATTTGCACTTTGT 59.811 43.478 26.55 0.00 33.49 2.83
176 177 3.189080 TGGAGATCGATTTGCACTTTGTG 59.811 43.478 6.02 0.00 36.51 3.33
185 186 3.636043 CACTTTGTGCGCGACCGT 61.636 61.111 12.10 0.26 36.67 4.83
186 187 3.636043 ACTTTGTGCGCGACCGTG 61.636 61.111 12.10 0.00 36.67 4.94
187 188 3.636043 CTTTGTGCGCGACCGTGT 61.636 61.111 12.10 0.00 36.67 4.49
188 189 3.558282 CTTTGTGCGCGACCGTGTC 62.558 63.158 12.10 0.00 36.67 3.67
189 190 4.874977 TTGTGCGCGACCGTGTCA 62.875 61.111 12.10 0.00 36.67 3.58
194 195 4.934942 CGCGACCGTGTCACCACA 62.935 66.667 0.00 0.00 41.93 4.17
195 196 3.036084 GCGACCGTGTCACCACAG 61.036 66.667 0.00 0.00 41.93 3.66
196 197 2.355837 CGACCGTGTCACCACAGG 60.356 66.667 0.00 0.00 41.93 4.00
197 198 2.665185 GACCGTGTCACCACAGGC 60.665 66.667 0.00 0.00 41.93 4.85
198 199 4.602259 ACCGTGTCACCACAGGCG 62.602 66.667 0.00 0.00 41.93 5.52
199 200 4.293648 CCGTGTCACCACAGGCGA 62.294 66.667 0.00 0.00 41.93 5.54
200 201 2.734723 CGTGTCACCACAGGCGAG 60.735 66.667 0.00 0.00 41.93 5.03
201 202 2.357517 GTGTCACCACAGGCGAGG 60.358 66.667 0.00 0.00 41.44 4.63
202 203 2.842462 TGTCACCACAGGCGAGGT 60.842 61.111 0.00 0.00 36.39 3.85
203 204 2.048127 GTCACCACAGGCGAGGTC 60.048 66.667 0.00 0.00 33.24 3.85
204 205 3.311110 TCACCACAGGCGAGGTCC 61.311 66.667 0.00 0.00 33.24 4.46
205 206 4.742201 CACCACAGGCGAGGTCCG 62.742 72.222 0.00 0.00 33.24 4.79
210 211 4.452733 CAGGCGAGGTCCGGGTTC 62.453 72.222 0.00 0.00 39.04 3.62
211 212 4.698625 AGGCGAGGTCCGGGTTCT 62.699 66.667 0.00 0.00 39.04 3.01
212 213 3.703127 GGCGAGGTCCGGGTTCTT 61.703 66.667 0.00 0.00 39.04 2.52
213 214 2.125633 GCGAGGTCCGGGTTCTTC 60.126 66.667 0.00 0.00 39.04 2.87
214 215 2.939261 GCGAGGTCCGGGTTCTTCA 61.939 63.158 0.00 0.00 39.04 3.02
215 216 1.080025 CGAGGTCCGGGTTCTTCAC 60.080 63.158 0.00 0.00 33.91 3.18
216 217 1.080025 GAGGTCCGGGTTCTTCACG 60.080 63.158 0.00 0.00 43.35 4.35
217 218 1.813728 GAGGTCCGGGTTCTTCACGT 61.814 60.000 0.00 0.00 41.99 4.49
218 219 1.070275 GGTCCGGGTTCTTCACGTT 59.930 57.895 0.00 0.00 41.99 3.99
219 220 0.947660 GGTCCGGGTTCTTCACGTTC 60.948 60.000 0.00 0.00 41.99 3.95
220 221 0.947660 GTCCGGGTTCTTCACGTTCC 60.948 60.000 0.00 0.00 41.99 3.62
221 222 2.025418 CCGGGTTCTTCACGTTCCG 61.025 63.158 0.00 0.00 41.99 4.30
222 223 1.007038 CGGGTTCTTCACGTTCCGA 60.007 57.895 0.00 0.00 39.83 4.55
223 224 1.007336 CGGGTTCTTCACGTTCCGAG 61.007 60.000 0.00 0.00 39.83 4.63
224 225 0.033090 GGGTTCTTCACGTTCCGAGT 59.967 55.000 0.00 0.00 0.00 4.18
225 226 1.539712 GGGTTCTTCACGTTCCGAGTT 60.540 52.381 0.00 0.00 0.00 3.01
226 227 1.791204 GGTTCTTCACGTTCCGAGTTC 59.209 52.381 0.00 0.00 0.00 3.01
227 228 2.545322 GGTTCTTCACGTTCCGAGTTCT 60.545 50.000 0.00 0.00 0.00 3.01
228 229 3.121544 GTTCTTCACGTTCCGAGTTCTT 58.878 45.455 0.00 0.00 0.00 2.52
229 230 3.009301 TCTTCACGTTCCGAGTTCTTC 57.991 47.619 0.00 0.00 0.00 2.87
230 231 2.359848 TCTTCACGTTCCGAGTTCTTCA 59.640 45.455 0.00 0.00 0.00 3.02
231 232 2.129823 TCACGTTCCGAGTTCTTCAC 57.870 50.000 0.00 0.00 0.00 3.18
232 233 1.406180 TCACGTTCCGAGTTCTTCACA 59.594 47.619 0.00 0.00 0.00 3.58
233 234 2.159212 TCACGTTCCGAGTTCTTCACAA 60.159 45.455 0.00 0.00 0.00 3.33
234 235 2.800544 CACGTTCCGAGTTCTTCACAAT 59.199 45.455 0.00 0.00 0.00 2.71
235 236 3.247648 CACGTTCCGAGTTCTTCACAATT 59.752 43.478 0.00 0.00 0.00 2.32
236 237 3.875134 ACGTTCCGAGTTCTTCACAATTT 59.125 39.130 0.00 0.00 0.00 1.82
237 238 4.211389 CGTTCCGAGTTCTTCACAATTTG 58.789 43.478 0.00 0.00 0.00 2.32
238 239 3.896648 TCCGAGTTCTTCACAATTTGC 57.103 42.857 0.00 0.00 0.00 3.68
239 240 2.223144 TCCGAGTTCTTCACAATTTGCG 59.777 45.455 0.00 0.00 0.00 4.85
240 241 2.574322 CGAGTTCTTCACAATTTGCGG 58.426 47.619 0.00 0.00 0.00 5.69
241 242 2.223144 CGAGTTCTTCACAATTTGCGGA 59.777 45.455 0.00 0.00 0.00 5.54
242 243 3.555518 GAGTTCTTCACAATTTGCGGAC 58.444 45.455 0.00 0.00 0.00 4.79
243 244 2.948979 AGTTCTTCACAATTTGCGGACA 59.051 40.909 0.00 0.00 0.00 4.02
244 245 3.569701 AGTTCTTCACAATTTGCGGACAT 59.430 39.130 0.00 0.00 0.00 3.06
245 246 4.037923 AGTTCTTCACAATTTGCGGACATT 59.962 37.500 0.00 0.00 0.00 2.71
246 247 4.582701 TCTTCACAATTTGCGGACATTT 57.417 36.364 0.00 0.00 0.00 2.32
247 248 4.942852 TCTTCACAATTTGCGGACATTTT 58.057 34.783 0.00 0.00 0.00 1.82
248 249 4.981674 TCTTCACAATTTGCGGACATTTTC 59.018 37.500 0.00 0.00 0.00 2.29
249 250 4.313277 TCACAATTTGCGGACATTTTCA 57.687 36.364 0.00 0.00 0.00 2.69
250 251 4.047822 TCACAATTTGCGGACATTTTCAC 58.952 39.130 0.00 0.00 0.00 3.18
251 252 3.184178 CACAATTTGCGGACATTTTCACC 59.816 43.478 0.00 0.00 0.00 4.02
252 253 3.181471 ACAATTTGCGGACATTTTCACCA 60.181 39.130 0.00 0.00 0.00 4.17
253 254 3.742433 ATTTGCGGACATTTTCACCAA 57.258 38.095 0.00 0.00 0.00 3.67
254 255 3.526931 TTTGCGGACATTTTCACCAAA 57.473 38.095 0.00 0.00 0.00 3.28
255 256 2.791383 TGCGGACATTTTCACCAAAG 57.209 45.000 0.00 0.00 0.00 2.77
256 257 1.339610 TGCGGACATTTTCACCAAAGG 59.660 47.619 0.00 0.00 32.13 3.11
257 258 1.611491 GCGGACATTTTCACCAAAGGA 59.389 47.619 0.00 0.00 30.35 3.36
258 259 2.231235 GCGGACATTTTCACCAAAGGAT 59.769 45.455 0.00 0.00 30.35 3.24
259 260 3.306019 GCGGACATTTTCACCAAAGGATT 60.306 43.478 0.00 0.00 30.35 3.01
260 261 4.236935 CGGACATTTTCACCAAAGGATTG 58.763 43.478 0.00 0.00 36.25 2.67
261 262 3.996363 GGACATTTTCACCAAAGGATTGC 59.004 43.478 0.00 0.00 35.10 3.56
262 263 3.996363 GACATTTTCACCAAAGGATTGCC 59.004 43.478 0.00 0.00 35.10 4.52
263 264 3.390639 ACATTTTCACCAAAGGATTGCCA 59.609 39.130 0.00 0.00 35.10 4.92
264 265 4.041938 ACATTTTCACCAAAGGATTGCCAT 59.958 37.500 0.00 0.00 35.10 4.40
265 266 3.959535 TTTCACCAAAGGATTGCCATC 57.040 42.857 0.00 0.00 35.10 3.51
273 274 2.549580 GGATTGCCATCCCCTCTCT 58.450 57.895 5.47 0.00 43.29 3.10
274 275 0.849417 GGATTGCCATCCCCTCTCTT 59.151 55.000 5.47 0.00 43.29 2.85
275 276 1.202867 GGATTGCCATCCCCTCTCTTC 60.203 57.143 5.47 0.00 43.29 2.87
276 277 1.773653 GATTGCCATCCCCTCTCTTCT 59.226 52.381 0.00 0.00 0.00 2.85
277 278 1.673767 TTGCCATCCCCTCTCTTCTT 58.326 50.000 0.00 0.00 0.00 2.52
278 279 0.914644 TGCCATCCCCTCTCTTCTTG 59.085 55.000 0.00 0.00 0.00 3.02
279 280 0.182299 GCCATCCCCTCTCTTCTTGG 59.818 60.000 0.00 0.00 0.00 3.61
280 281 1.885049 CCATCCCCTCTCTTCTTGGA 58.115 55.000 0.00 0.00 0.00 3.53
281 282 2.416638 CCATCCCCTCTCTTCTTGGAT 58.583 52.381 0.00 0.00 36.26 3.41
282 283 2.782341 CCATCCCCTCTCTTCTTGGATT 59.218 50.000 0.00 0.00 33.60 3.01
283 284 3.203934 CCATCCCCTCTCTTCTTGGATTT 59.796 47.826 0.00 0.00 33.60 2.17
284 285 4.325658 CCATCCCCTCTCTTCTTGGATTTT 60.326 45.833 0.00 0.00 33.60 1.82
285 286 4.576330 TCCCCTCTCTTCTTGGATTTTC 57.424 45.455 0.00 0.00 0.00 2.29
286 287 3.055094 TCCCCTCTCTTCTTGGATTTTCG 60.055 47.826 0.00 0.00 0.00 3.46
287 288 3.274288 CCCTCTCTTCTTGGATTTTCGG 58.726 50.000 0.00 0.00 0.00 4.30
288 289 3.274288 CCTCTCTTCTTGGATTTTCGGG 58.726 50.000 0.00 0.00 0.00 5.14
289 290 3.055094 CCTCTCTTCTTGGATTTTCGGGA 60.055 47.826 0.00 0.00 0.00 5.14
290 291 3.935828 CTCTCTTCTTGGATTTTCGGGAC 59.064 47.826 0.00 0.00 0.00 4.46
291 292 3.326588 TCTCTTCTTGGATTTTCGGGACA 59.673 43.478 0.00 0.00 0.00 4.02
292 293 3.674997 TCTTCTTGGATTTTCGGGACAG 58.325 45.455 0.00 0.00 0.00 3.51
293 294 3.072476 TCTTCTTGGATTTTCGGGACAGT 59.928 43.478 0.00 0.00 0.00 3.55
294 295 3.053831 TCTTGGATTTTCGGGACAGTC 57.946 47.619 0.00 0.00 0.00 3.51
295 296 2.637872 TCTTGGATTTTCGGGACAGTCT 59.362 45.455 0.00 0.00 0.00 3.24
296 297 3.072476 TCTTGGATTTTCGGGACAGTCTT 59.928 43.478 0.00 0.00 0.00 3.01
297 298 4.285003 TCTTGGATTTTCGGGACAGTCTTA 59.715 41.667 0.00 0.00 0.00 2.10
298 299 4.627284 TGGATTTTCGGGACAGTCTTAA 57.373 40.909 0.00 0.00 0.00 1.85
299 300 4.320870 TGGATTTTCGGGACAGTCTTAAC 58.679 43.478 0.00 0.00 0.00 2.01
300 301 4.202377 TGGATTTTCGGGACAGTCTTAACA 60.202 41.667 0.00 0.00 0.00 2.41
301 302 4.941873 GGATTTTCGGGACAGTCTTAACAT 59.058 41.667 0.00 0.00 0.00 2.71
302 303 5.414765 GGATTTTCGGGACAGTCTTAACATT 59.585 40.000 0.00 0.00 0.00 2.71
303 304 5.934935 TTTTCGGGACAGTCTTAACATTC 57.065 39.130 0.00 0.00 0.00 2.67
304 305 3.226346 TCGGGACAGTCTTAACATTCG 57.774 47.619 0.00 0.00 0.00 3.34
305 306 2.559668 TCGGGACAGTCTTAACATTCGT 59.440 45.455 0.00 0.00 0.00 3.85
306 307 2.666508 CGGGACAGTCTTAACATTCGTG 59.333 50.000 0.00 0.00 0.00 4.35
307 308 3.000727 GGGACAGTCTTAACATTCGTGG 58.999 50.000 0.00 0.00 0.00 4.94
308 309 3.306502 GGGACAGTCTTAACATTCGTGGA 60.307 47.826 0.00 0.00 0.00 4.02
309 310 3.678548 GGACAGTCTTAACATTCGTGGAC 59.321 47.826 0.00 0.00 0.00 4.02
310 311 3.314553 ACAGTCTTAACATTCGTGGACG 58.685 45.455 0.00 0.00 41.45 4.79
311 312 2.092211 CAGTCTTAACATTCGTGGACGC 59.908 50.000 0.00 0.00 39.60 5.19
312 313 1.392510 GTCTTAACATTCGTGGACGCC 59.607 52.381 0.00 0.00 39.60 5.68
313 314 0.725117 CTTAACATTCGTGGACGCCC 59.275 55.000 0.00 0.00 39.60 6.13
314 315 1.015085 TTAACATTCGTGGACGCCCG 61.015 55.000 0.00 0.00 39.60 6.13
315 316 2.157305 TAACATTCGTGGACGCCCGT 62.157 55.000 0.00 0.00 39.60 5.28
316 317 2.740826 CATTCGTGGACGCCCGTT 60.741 61.111 0.00 0.00 39.60 4.44
317 318 2.031465 ATTCGTGGACGCCCGTTT 59.969 55.556 0.00 0.00 39.60 3.60
318 319 1.015085 CATTCGTGGACGCCCGTTTA 61.015 55.000 0.00 0.00 39.60 2.01
319 320 1.015607 ATTCGTGGACGCCCGTTTAC 61.016 55.000 0.00 0.00 39.60 2.01
320 321 3.472298 CGTGGACGCCCGTTTACG 61.472 66.667 13.32 13.32 39.44 3.18
321 322 2.049248 GTGGACGCCCGTTTACGA 60.049 61.111 3.46 0.00 43.02 3.43
322 323 2.049248 TGGACGCCCGTTTACGAC 60.049 61.111 3.46 0.00 43.02 4.34
323 324 2.259511 GGACGCCCGTTTACGACT 59.740 61.111 3.46 0.00 43.02 4.18
324 325 2.090524 GGACGCCCGTTTACGACTG 61.091 63.158 3.46 0.00 43.02 3.51
325 326 1.081242 GACGCCCGTTTACGACTGA 60.081 57.895 3.46 0.00 43.02 3.41
326 327 1.069378 GACGCCCGTTTACGACTGAG 61.069 60.000 3.46 0.00 43.02 3.35
327 328 1.804326 CGCCCGTTTACGACTGAGG 60.804 63.158 3.46 0.00 43.02 3.86
328 329 1.447314 GCCCGTTTACGACTGAGGG 60.447 63.158 3.46 0.00 43.02 4.30
329 330 1.880819 GCCCGTTTACGACTGAGGGA 61.881 60.000 12.66 0.00 41.26 4.20
330 331 0.172803 CCCGTTTACGACTGAGGGAG 59.827 60.000 3.46 0.00 41.26 4.30
331 332 0.172803 CCGTTTACGACTGAGGGAGG 59.827 60.000 3.46 0.00 43.02 4.30
332 333 0.172803 CGTTTACGACTGAGGGAGGG 59.827 60.000 0.00 0.00 43.02 4.30
333 334 1.264295 GTTTACGACTGAGGGAGGGT 58.736 55.000 0.00 0.00 0.00 4.34
334 335 1.067071 GTTTACGACTGAGGGAGGGTG 60.067 57.143 0.00 0.00 0.00 4.61
335 336 0.113776 TTACGACTGAGGGAGGGTGT 59.886 55.000 0.00 0.00 0.00 4.16
336 337 0.113776 TACGACTGAGGGAGGGTGTT 59.886 55.000 0.00 0.00 0.00 3.32
337 338 0.113776 ACGACTGAGGGAGGGTGTTA 59.886 55.000 0.00 0.00 0.00 2.41
338 339 0.818296 CGACTGAGGGAGGGTGTTAG 59.182 60.000 0.00 0.00 0.00 2.34
339 340 1.616187 CGACTGAGGGAGGGTGTTAGA 60.616 57.143 0.00 0.00 0.00 2.10
340 341 2.537143 GACTGAGGGAGGGTGTTAGAA 58.463 52.381 0.00 0.00 0.00 2.10
341 342 3.108376 GACTGAGGGAGGGTGTTAGAAT 58.892 50.000 0.00 0.00 0.00 2.40
342 343 4.287552 GACTGAGGGAGGGTGTTAGAATA 58.712 47.826 0.00 0.00 0.00 1.75
343 344 4.897051 ACTGAGGGAGGGTGTTAGAATAT 58.103 43.478 0.00 0.00 0.00 1.28
344 345 6.039415 ACTGAGGGAGGGTGTTAGAATATA 57.961 41.667 0.00 0.00 0.00 0.86
345 346 6.635021 ACTGAGGGAGGGTGTTAGAATATAT 58.365 40.000 0.00 0.00 0.00 0.86
346 347 7.776745 ACTGAGGGAGGGTGTTAGAATATATA 58.223 38.462 0.00 0.00 0.00 0.86
347 348 8.239478 ACTGAGGGAGGGTGTTAGAATATATAA 58.761 37.037 0.00 0.00 0.00 0.98
348 349 8.431910 TGAGGGAGGGTGTTAGAATATATAAC 57.568 38.462 4.52 4.52 34.40 1.89
349 350 7.456902 TGAGGGAGGGTGTTAGAATATATAACC 59.543 40.741 7.80 0.00 33.13 2.85
350 351 6.439692 AGGGAGGGTGTTAGAATATATAACCG 59.560 42.308 7.80 0.00 33.13 4.44
351 352 6.212187 GGGAGGGTGTTAGAATATATAACCGT 59.788 42.308 7.80 0.00 33.13 4.83
352 353 7.397192 GGGAGGGTGTTAGAATATATAACCGTA 59.603 40.741 7.80 0.00 33.13 4.02
353 354 8.975295 GGAGGGTGTTAGAATATATAACCGTAT 58.025 37.037 7.80 0.00 33.13 3.06
373 374 8.206325 CCGTATTCTGTGTATAGATATACGGT 57.794 38.462 23.95 0.00 45.04 4.83
374 375 8.671921 CCGTATTCTGTGTATAGATATACGGTT 58.328 37.037 23.95 7.24 45.04 4.44
375 376 9.486857 CGTATTCTGTGTATAGATATACGGTTG 57.513 37.037 16.14 0.00 41.04 3.77
391 392 5.927281 ACGGTTGTATATGTGTAGTCCTT 57.073 39.130 0.00 0.00 0.00 3.36
392 393 5.657474 ACGGTTGTATATGTGTAGTCCTTG 58.343 41.667 0.00 0.00 0.00 3.61
393 394 5.186409 ACGGTTGTATATGTGTAGTCCTTGT 59.814 40.000 0.00 0.00 0.00 3.16
394 395 6.377996 ACGGTTGTATATGTGTAGTCCTTGTA 59.622 38.462 0.00 0.00 0.00 2.41
395 396 7.069085 ACGGTTGTATATGTGTAGTCCTTGTAT 59.931 37.037 0.00 0.00 0.00 2.29
396 397 8.570488 CGGTTGTATATGTGTAGTCCTTGTATA 58.430 37.037 0.00 0.00 0.00 1.47
397 398 9.909644 GGTTGTATATGTGTAGTCCTTGTATAG 57.090 37.037 0.00 0.00 0.00 1.31
398 399 9.909644 GTTGTATATGTGTAGTCCTTGTATAGG 57.090 37.037 0.00 0.00 46.27 2.57
399 400 9.650714 TTGTATATGTGTAGTCCTTGTATAGGT 57.349 33.333 0.00 0.00 45.03 3.08
400 401 9.074576 TGTATATGTGTAGTCCTTGTATAGGTG 57.925 37.037 0.00 0.00 45.03 4.00
401 402 9.075678 GTATATGTGTAGTCCTTGTATAGGTGT 57.924 37.037 0.00 0.00 45.03 4.16
402 403 5.909621 TGTGTAGTCCTTGTATAGGTGTC 57.090 43.478 0.00 0.00 45.03 3.67
403 404 4.708421 TGTGTAGTCCTTGTATAGGTGTCC 59.292 45.833 0.00 0.00 45.03 4.02
404 405 3.949754 TGTAGTCCTTGTATAGGTGTCCG 59.050 47.826 0.00 0.00 45.03 4.79
405 406 3.097342 AGTCCTTGTATAGGTGTCCGT 57.903 47.619 0.00 0.00 45.03 4.69
406 407 4.240881 AGTCCTTGTATAGGTGTCCGTA 57.759 45.455 0.00 0.00 45.03 4.02
407 408 4.801164 AGTCCTTGTATAGGTGTCCGTAT 58.199 43.478 0.00 0.00 45.03 3.06
408 409 5.945310 AGTCCTTGTATAGGTGTCCGTATA 58.055 41.667 0.00 0.00 45.03 1.47
409 410 6.550163 AGTCCTTGTATAGGTGTCCGTATAT 58.450 40.000 0.00 0.00 45.03 0.86
410 411 7.008941 AGTCCTTGTATAGGTGTCCGTATATT 58.991 38.462 0.00 0.00 45.03 1.28
411 412 7.039923 AGTCCTTGTATAGGTGTCCGTATATTG 60.040 40.741 0.00 0.00 45.03 1.90
412 413 6.779049 TCCTTGTATAGGTGTCCGTATATTGT 59.221 38.462 0.00 0.00 45.03 2.71
413 414 7.944000 TCCTTGTATAGGTGTCCGTATATTGTA 59.056 37.037 0.00 0.00 45.03 2.41
414 415 8.025445 CCTTGTATAGGTGTCCGTATATTGTAC 58.975 40.741 0.00 0.00 39.39 2.90
415 416 7.132694 TGTATAGGTGTCCGTATATTGTACG 57.867 40.000 6.04 6.04 40.30 3.67
416 417 6.934083 TGTATAGGTGTCCGTATATTGTACGA 59.066 38.462 13.70 0.00 42.94 3.43
417 418 7.607607 TGTATAGGTGTCCGTATATTGTACGAT 59.392 37.037 13.70 0.23 42.94 3.73
418 419 9.098355 GTATAGGTGTCCGTATATTGTACGATA 57.902 37.037 13.70 5.26 42.94 2.92
419 420 6.246420 AGGTGTCCGTATATTGTACGATAC 57.754 41.667 13.70 11.38 42.94 2.24
420 421 5.082059 GGTGTCCGTATATTGTACGATACG 58.918 45.833 19.82 19.82 46.64 3.06
428 429 7.476378 GTATATTGTACGATACGAACTCTGC 57.524 40.000 4.88 0.00 0.00 4.26
429 430 2.838386 TGTACGATACGAACTCTGCC 57.162 50.000 0.00 0.00 0.00 4.85
430 431 2.362736 TGTACGATACGAACTCTGCCT 58.637 47.619 0.00 0.00 0.00 4.75
431 432 2.751259 TGTACGATACGAACTCTGCCTT 59.249 45.455 0.00 0.00 0.00 4.35
432 433 2.279582 ACGATACGAACTCTGCCTTG 57.720 50.000 0.00 0.00 0.00 3.61
433 434 1.544691 ACGATACGAACTCTGCCTTGT 59.455 47.619 0.00 0.00 0.00 3.16
434 435 2.751259 ACGATACGAACTCTGCCTTGTA 59.249 45.455 0.00 0.00 0.00 2.41
435 436 3.192001 ACGATACGAACTCTGCCTTGTAA 59.808 43.478 0.00 0.00 0.00 2.41
436 437 3.546670 CGATACGAACTCTGCCTTGTAAC 59.453 47.826 0.00 0.00 0.00 2.50
437 438 2.165319 ACGAACTCTGCCTTGTAACC 57.835 50.000 0.00 0.00 0.00 2.85
438 439 1.692519 ACGAACTCTGCCTTGTAACCT 59.307 47.619 0.00 0.00 0.00 3.50
439 440 2.069273 CGAACTCTGCCTTGTAACCTG 58.931 52.381 0.00 0.00 0.00 4.00
440 441 2.548067 CGAACTCTGCCTTGTAACCTGT 60.548 50.000 0.00 0.00 0.00 4.00
441 442 3.305813 CGAACTCTGCCTTGTAACCTGTA 60.306 47.826 0.00 0.00 0.00 2.74
442 443 4.620803 CGAACTCTGCCTTGTAACCTGTAT 60.621 45.833 0.00 0.00 0.00 2.29
443 444 5.393787 CGAACTCTGCCTTGTAACCTGTATA 60.394 44.000 0.00 0.00 0.00 1.47
444 445 6.561519 AACTCTGCCTTGTAACCTGTATAT 57.438 37.500 0.00 0.00 0.00 0.86
445 446 7.469594 CGAACTCTGCCTTGTAACCTGTATATA 60.470 40.741 0.00 0.00 0.00 0.86
446 447 7.857404 ACTCTGCCTTGTAACCTGTATATAT 57.143 36.000 0.00 0.00 0.00 0.86
447 448 8.263854 ACTCTGCCTTGTAACCTGTATATATT 57.736 34.615 0.00 0.00 0.00 1.28
448 449 8.150945 ACTCTGCCTTGTAACCTGTATATATTG 58.849 37.037 0.00 0.00 0.00 1.90
449 450 8.257602 TCTGCCTTGTAACCTGTATATATTGA 57.742 34.615 0.00 0.00 0.00 2.57
450 451 8.880244 TCTGCCTTGTAACCTGTATATATTGAT 58.120 33.333 0.00 0.00 0.00 2.57
451 452 9.155975 CTGCCTTGTAACCTGTATATATTGATC 57.844 37.037 0.00 0.00 0.00 2.92
452 453 8.655901 TGCCTTGTAACCTGTATATATTGATCA 58.344 33.333 0.00 0.00 0.00 2.92
453 454 9.502091 GCCTTGTAACCTGTATATATTGATCAA 57.498 33.333 11.26 11.26 0.00 2.57
461 462 9.672673 ACCTGTATATATTGATCAATACAAGGC 57.327 33.333 26.51 16.82 36.24 4.35
462 463 9.671279 CCTGTATATATTGATCAATACAAGGCA 57.329 33.333 26.51 19.55 36.24 4.75
464 465 9.448438 TGTATATATTGATCAATACAAGGCACC 57.552 33.333 26.51 11.93 36.24 5.01
465 466 9.448438 GTATATATTGATCAATACAAGGCACCA 57.552 33.333 26.51 6.50 36.24 4.17
466 467 4.989279 ATTGATCAATACAAGGCACCAC 57.011 40.909 19.42 0.00 0.00 4.16
467 468 3.431673 TGATCAATACAAGGCACCACA 57.568 42.857 0.00 0.00 0.00 4.17
468 469 3.760738 TGATCAATACAAGGCACCACAA 58.239 40.909 0.00 0.00 0.00 3.33
469 470 3.505680 TGATCAATACAAGGCACCACAAC 59.494 43.478 0.00 0.00 0.00 3.32
470 471 1.876799 TCAATACAAGGCACCACAACG 59.123 47.619 0.00 0.00 0.00 4.10
471 472 1.606668 CAATACAAGGCACCACAACGT 59.393 47.619 0.00 0.00 0.00 3.99
472 473 1.234821 ATACAAGGCACCACAACGTG 58.765 50.000 0.00 0.00 36.80 4.49
473 474 0.107606 TACAAGGCACCACAACGTGT 60.108 50.000 0.00 0.00 36.08 4.49
482 483 1.731093 CACAACGTGTGGTTTCCCC 59.269 57.895 9.43 0.00 44.27 4.81
483 484 1.032657 CACAACGTGTGGTTTCCCCA 61.033 55.000 9.43 0.00 44.27 4.96
496 497 3.193479 GGTTTCCCCAATCTTACAAGCAG 59.807 47.826 0.00 0.00 0.00 4.24
526 527 8.117813 AGAAGCTATATCACCTCTAACTTAGC 57.882 38.462 0.00 0.00 0.00 3.09
587 588 1.159285 TCGAGCGAACCGAGTTCTTA 58.841 50.000 12.80 0.00 40.05 2.10
597 598 6.320171 CGAACCGAGTTCTTAGATAGTTGAA 58.680 40.000 12.80 0.00 40.05 2.69
613 614 8.105829 AGATAGTTGAAGTCTTTGTGATGGAAT 58.894 33.333 0.00 0.00 0.00 3.01
638 639 6.386927 TCAATCCACCTAGGTTTGAGTGATAT 59.613 38.462 26.07 5.85 46.29 1.63
714 715 1.552337 TCTGTCCAGTTGAGAGATGCC 59.448 52.381 0.00 0.00 38.39 4.40
715 716 1.277273 CTGTCCAGTTGAGAGATGCCA 59.723 52.381 0.00 0.00 36.48 4.92
736 749 5.065988 GCCATTACATCGACATGGTTACTTT 59.934 40.000 13.51 0.00 39.88 2.66
739 752 7.696453 CCATTACATCGACATGGTTACTTTTTC 59.304 37.037 0.00 0.00 33.90 2.29
741 754 6.241207 ACATCGACATGGTTACTTTTTCAG 57.759 37.500 0.00 0.00 33.82 3.02
748 761 3.715495 TGGTTACTTTTTCAGCGACGTA 58.285 40.909 0.00 0.00 0.00 3.57
831 846 5.002516 AGACTCAAAGCTCCAAATTCAGAG 58.997 41.667 0.00 1.24 0.00 3.35
836 851 4.861102 AAGCTCCAAATTCAGAGGTTTG 57.139 40.909 13.50 4.23 45.86 2.93
874 889 5.509716 TCTACTAGCCGATTTTCGAATGA 57.490 39.130 0.00 0.00 43.74 2.57
876 891 6.513180 TCTACTAGCCGATTTTCGAATGAAT 58.487 36.000 0.00 0.00 43.74 2.57
944 977 1.669115 CGGTCACTTGCCACTCCAG 60.669 63.158 0.00 0.00 0.00 3.86
1302 1335 2.796193 CCGCATCTGGGACATCCGA 61.796 63.158 0.00 0.00 38.20 4.55
1374 1407 2.203337 GTGCTCAAGGGCCACACA 60.203 61.111 6.18 0.00 0.00 3.72
1554 1587 2.481276 GGACGGATCGATCATTGTGTCA 60.481 50.000 25.93 0.00 0.00 3.58
1665 1698 1.081892 CCTGCTCAATGTTCTCACCG 58.918 55.000 0.00 0.00 0.00 4.94
1735 1768 7.936496 TGACCAATTGACTGCTATTTCATAA 57.064 32.000 7.12 0.00 0.00 1.90
1736 1769 7.988737 TGACCAATTGACTGCTATTTCATAAG 58.011 34.615 7.12 0.00 0.00 1.73
1737 1770 7.611467 TGACCAATTGACTGCTATTTCATAAGT 59.389 33.333 7.12 0.00 0.00 2.24
1738 1771 9.109393 GACCAATTGACTGCTATTTCATAAGTA 57.891 33.333 7.12 0.00 0.00 2.24
1739 1772 8.893727 ACCAATTGACTGCTATTTCATAAGTAC 58.106 33.333 7.12 0.00 0.00 2.73
1740 1773 9.113838 CCAATTGACTGCTATTTCATAAGTACT 57.886 33.333 7.12 0.00 0.00 2.73
1742 1775 8.894768 ATTGACTGCTATTTCATAAGTACTCC 57.105 34.615 0.00 0.00 0.00 3.85
1743 1776 6.504398 TGACTGCTATTTCATAAGTACTCCG 58.496 40.000 0.00 0.00 0.00 4.63
1744 1777 5.290386 ACTGCTATTTCATAAGTACTCCGC 58.710 41.667 0.00 0.00 0.00 5.54
1745 1778 5.069251 ACTGCTATTTCATAAGTACTCCGCT 59.931 40.000 0.00 0.00 0.00 5.52
1746 1779 6.264744 ACTGCTATTTCATAAGTACTCCGCTA 59.735 38.462 0.00 0.00 0.00 4.26
1747 1780 7.039644 ACTGCTATTTCATAAGTACTCCGCTAT 60.040 37.037 0.00 0.00 0.00 2.97
1748 1781 7.667557 TGCTATTTCATAAGTACTCCGCTATT 58.332 34.615 0.00 0.00 0.00 1.73
1749 1782 8.148351 TGCTATTTCATAAGTACTCCGCTATTT 58.852 33.333 0.00 0.00 0.00 1.40
1750 1783 8.648968 GCTATTTCATAAGTACTCCGCTATTTC 58.351 37.037 0.00 0.00 0.00 2.17
1751 1784 9.692749 CTATTTCATAAGTACTCCGCTATTTCA 57.307 33.333 0.00 0.00 0.00 2.69
1755 1788 9.692749 TTCATAAGTACTCCGCTATTTCATAAG 57.307 33.333 0.00 0.00 0.00 1.73
1756 1789 8.857098 TCATAAGTACTCCGCTATTTCATAAGT 58.143 33.333 0.00 0.00 0.00 2.24
1759 1792 7.820578 AGTACTCCGCTATTTCATAAGTACT 57.179 36.000 6.49 6.49 41.70 2.73
1768 1801 5.952347 ATTTCATAAGTACTCCCTCCGTT 57.048 39.130 0.00 0.00 0.00 4.44
1771 1804 3.053095 TCATAAGTACTCCCTCCGTTCCT 60.053 47.826 0.00 0.00 0.00 3.36
1777 1810 5.713807 AGTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
1778 1811 6.856757 AGTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
1779 1812 7.300658 AGTACTCCCTCCGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
1784 1817 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
1785 1818 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
1787 1820 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
1828 1861 9.666626 GAACTACATACGGATGTATATAGATGC 57.333 37.037 20.64 0.00 45.42 3.91
1829 1862 8.747538 ACTACATACGGATGTATATAGATGCA 57.252 34.615 20.64 0.00 45.42 3.96
1830 1863 9.355916 ACTACATACGGATGTATATAGATGCAT 57.644 33.333 20.64 0.00 45.42 3.96
1833 1866 9.890629 ACATACGGATGTATATAGATGCATTTT 57.109 29.630 12.79 0.00 44.77 1.82
1837 1870 9.944376 ACGGATGTATATAGATGCATTTTAAGT 57.056 29.630 11.19 0.00 38.38 2.24
1846 1879 6.839124 AGATGCATTTTAAGTGTGGATTCA 57.161 33.333 0.00 0.00 0.00 2.57
1847 1880 7.414222 AGATGCATTTTAAGTGTGGATTCAT 57.586 32.000 0.00 0.00 0.00 2.57
1848 1881 7.844009 AGATGCATTTTAAGTGTGGATTCATT 58.156 30.769 0.00 0.00 0.00 2.57
1849 1882 7.977853 AGATGCATTTTAAGTGTGGATTCATTC 59.022 33.333 0.00 0.00 0.00 2.67
1850 1883 6.990798 TGCATTTTAAGTGTGGATTCATTCA 58.009 32.000 0.00 0.00 0.00 2.57
1851 1884 7.613585 TGCATTTTAAGTGTGGATTCATTCAT 58.386 30.769 0.00 0.00 0.00 2.57
1852 1885 8.095792 TGCATTTTAAGTGTGGATTCATTCATT 58.904 29.630 0.00 0.00 0.00 2.57
1853 1886 8.938906 GCATTTTAAGTGTGGATTCATTCATTT 58.061 29.630 0.00 0.00 0.00 2.32
1856 1889 7.887996 TTAAGTGTGGATTCATTCATTTTGC 57.112 32.000 0.00 0.00 0.00 3.68
1857 1890 5.733620 AGTGTGGATTCATTCATTTTGCT 57.266 34.783 0.00 0.00 0.00 3.91
1858 1891 5.717119 AGTGTGGATTCATTCATTTTGCTC 58.283 37.500 0.00 0.00 0.00 4.26
1859 1892 4.866486 GTGTGGATTCATTCATTTTGCTCC 59.134 41.667 0.00 0.00 0.00 4.70
1860 1893 4.107622 GTGGATTCATTCATTTTGCTCCG 58.892 43.478 0.00 0.00 0.00 4.63
1861 1894 3.763360 TGGATTCATTCATTTTGCTCCGT 59.237 39.130 0.00 0.00 0.00 4.69
1862 1895 4.946772 TGGATTCATTCATTTTGCTCCGTA 59.053 37.500 0.00 0.00 0.00 4.02
1863 1896 5.593909 TGGATTCATTCATTTTGCTCCGTAT 59.406 36.000 0.00 0.00 0.00 3.06
1864 1897 5.916883 GGATTCATTCATTTTGCTCCGTATG 59.083 40.000 0.00 0.00 0.00 2.39
1865 1898 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
1866 1899 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
1867 1900 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
1868 1901 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
1869 1902 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
1870 1903 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
1871 1904 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
1872 1905 2.953466 TTGCTCCGTATGTAGTCCAC 57.047 50.000 0.00 0.00 0.00 4.02
1873 1906 1.108776 TGCTCCGTATGTAGTCCACC 58.891 55.000 0.00 0.00 0.00 4.61
1874 1907 1.341679 TGCTCCGTATGTAGTCCACCT 60.342 52.381 0.00 0.00 0.00 4.00
1875 1908 2.092267 TGCTCCGTATGTAGTCCACCTA 60.092 50.000 0.00 0.00 0.00 3.08
1876 1909 2.553172 GCTCCGTATGTAGTCCACCTAG 59.447 54.545 0.00 0.00 0.00 3.02
1877 1910 3.818180 CTCCGTATGTAGTCCACCTAGT 58.182 50.000 0.00 0.00 0.00 2.57
1878 1911 3.548770 TCCGTATGTAGTCCACCTAGTG 58.451 50.000 0.00 0.00 0.00 2.74
1893 1926 6.531503 CACCTAGTGGAATCTCTACAAAGA 57.468 41.667 0.00 0.00 37.04 2.52
1894 1927 6.334202 CACCTAGTGGAATCTCTACAAAGAC 58.666 44.000 0.00 0.00 37.04 3.01
1895 1928 6.153680 CACCTAGTGGAATCTCTACAAAGACT 59.846 42.308 0.00 0.00 37.04 3.24
1896 1929 6.726764 ACCTAGTGGAATCTCTACAAAGACTT 59.273 38.462 0.00 0.00 37.04 3.01
1897 1930 7.894364 ACCTAGTGGAATCTCTACAAAGACTTA 59.106 37.037 0.00 0.00 37.04 2.24
1898 1931 8.192110 CCTAGTGGAATCTCTACAAAGACTTAC 58.808 40.741 0.00 0.00 34.57 2.34
1899 1932 7.540474 AGTGGAATCTCTACAAAGACTTACA 57.460 36.000 0.00 0.00 29.47 2.41
1900 1933 8.140112 AGTGGAATCTCTACAAAGACTTACAT 57.860 34.615 0.00 0.00 29.47 2.29
1901 1934 8.598041 AGTGGAATCTCTACAAAGACTTACATT 58.402 33.333 0.00 0.00 29.47 2.71
1902 1935 9.220767 GTGGAATCTCTACAAAGACTTACATTT 57.779 33.333 0.00 0.00 0.00 2.32
1908 1941 9.924650 TCTCTACAAAGACTTACATTTAGGAAC 57.075 33.333 0.00 0.00 0.00 3.62
1909 1942 8.752766 TCTACAAAGACTTACATTTAGGAACG 57.247 34.615 0.00 0.00 0.00 3.95
1910 1943 6.796705 ACAAAGACTTACATTTAGGAACGG 57.203 37.500 0.00 0.00 0.00 4.44
1911 1944 6.527423 ACAAAGACTTACATTTAGGAACGGA 58.473 36.000 0.00 0.00 0.00 4.69
1912 1945 6.649557 ACAAAGACTTACATTTAGGAACGGAG 59.350 38.462 0.00 0.00 0.00 4.63
1913 1946 5.340439 AGACTTACATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
1914 1947 4.161754 AGACTTACATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
1915 1948 4.098894 ACTTACATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
1916 1949 4.161754 ACTTACATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
1917 1950 2.547990 ACATTTAGGAACGGAGGGAGT 58.452 47.619 0.00 0.00 0.00 3.85
1918 1951 3.716431 ACATTTAGGAACGGAGGGAGTA 58.284 45.455 0.00 0.00 0.00 2.59
1979 2013 5.662456 CCTCTTAGGCCTTAGTTAGTGTTC 58.338 45.833 12.58 0.00 0.00 3.18
2284 2385 7.255242 CCCACATGTTGACAAGGATATTGTATC 60.255 40.741 0.00 0.00 31.96 2.24
2304 2405 0.843309 TGAGGCTGTGGGTTTGAAGA 59.157 50.000 0.00 0.00 0.00 2.87
2307 2408 1.145738 AGGCTGTGGGTTTGAAGACAT 59.854 47.619 0.00 0.00 0.00 3.06
2511 2613 3.326747 GTGCTCGTCCATTTAACTGTCT 58.673 45.455 0.00 0.00 0.00 3.41
2571 2673 3.066621 TGCTACTTTTGCACCAACAGAAG 59.933 43.478 0.00 0.00 37.67 2.85
2727 2829 8.100791 ACACTTATCTACTAACTTCATGCCAAA 58.899 33.333 0.00 0.00 0.00 3.28
2779 2881 5.072193 TCCATATTGTGATGAGCCTGTACAT 59.928 40.000 0.00 0.00 0.00 2.29
3192 3297 8.783660 AGGTGTATCAATAACATAGAAGAGGA 57.216 34.615 0.00 0.00 0.00 3.71
3217 3322 4.322198 GGTTAAGAGGACGATACAACACCA 60.322 45.833 0.00 0.00 0.00 4.17
3270 3375 0.746659 AGCTGCAAACCTGAACAACC 59.253 50.000 1.02 0.00 0.00 3.77
3429 3548 1.490069 TCGATGGAGCCAAATCATCCA 59.510 47.619 0.00 0.00 46.69 3.41
3463 3582 7.394641 AGGATAATTTTCTTTTGAGGGACAGAC 59.605 37.037 0.00 0.00 0.00 3.51
3510 3629 0.039527 CCGCAAGCCAACCACTTTAC 60.040 55.000 0.00 0.00 0.00 2.01
3521 3640 2.062636 ACCACTTTACCAGACCACCAT 58.937 47.619 0.00 0.00 0.00 3.55
3561 3680 0.253327 GTCTGGGATCCACTTGGGTC 59.747 60.000 15.23 0.00 44.64 4.46
3562 3681 0.119155 TCTGGGATCCACTTGGGTCT 59.881 55.000 15.23 0.00 44.75 3.85
3563 3682 0.543749 CTGGGATCCACTTGGGTCTC 59.456 60.000 15.23 4.90 46.25 3.36
3564 3683 1.522569 GGGATCCACTTGGGTCTCG 59.477 63.158 15.23 0.00 44.75 4.04
3565 3684 1.522569 GGATCCACTTGGGTCTCGG 59.477 63.158 6.95 0.00 44.75 4.63
3566 3685 1.153349 GATCCACTTGGGTCTCGGC 60.153 63.158 0.84 0.00 42.10 5.54
3567 3686 2.595009 GATCCACTTGGGTCTCGGCC 62.595 65.000 0.84 0.00 42.10 6.13
3568 3687 3.322466 CCACTTGGGTCTCGGCCT 61.322 66.667 0.00 0.00 0.00 5.19
3632 3751 2.357517 GCCACCACACAGTCGAGG 60.358 66.667 0.00 0.00 0.00 4.63
3645 3764 1.909302 AGTCGAGGATCAAATGGGTGT 59.091 47.619 0.00 0.00 33.17 4.16
3664 3783 4.518970 GGTGTTTGCTACATTTCTCAAGGA 59.481 41.667 0.00 0.00 39.39 3.36
3665 3784 5.335191 GGTGTTTGCTACATTTCTCAAGGAG 60.335 44.000 0.00 0.00 39.39 3.69
3988 4112 2.175878 AGTGGACATGTGAACAGAGC 57.824 50.000 1.15 0.00 0.00 4.09
4059 4183 2.238646 AGTGGGTCGGAAGATAAATGCA 59.761 45.455 0.00 0.00 45.19 3.96
4514 4640 5.113502 CAGATTTGGACCTCTTTGTTCAC 57.886 43.478 0.00 0.00 0.00 3.18
4530 4656 1.008875 TCACGAGATTGCAGTGCGAC 61.009 55.000 7.35 2.42 35.97 5.19
4565 4691 3.525619 CATTGCAATGCTGGCAGTT 57.474 47.368 25.50 0.00 43.05 3.16
4567 4693 2.147958 CATTGCAATGCTGGCAGTTTT 58.852 42.857 25.50 7.29 43.05 2.43
4677 4803 4.737855 TCTTAGTAGGTGTCAATCTGCC 57.262 45.455 0.00 0.00 0.00 4.85
4688 4814 0.465097 CAATCTGCCGAGCTGGGATT 60.465 55.000 20.35 6.65 37.50 3.01
4710 4836 2.684843 GCCTCACTTGAGCTTGCGG 61.685 63.158 0.26 0.00 40.75 5.69
4764 4926 4.620184 GCTTAGCTTGATCAAACTTGCTTG 59.380 41.667 20.88 15.78 32.72 4.01
4824 5669 4.022416 GCTTGACAACACATGGATGGTAAA 60.022 41.667 0.00 0.00 0.00 2.01
4866 5712 1.494960 AGCAAAACCAGGGCTGAAAA 58.505 45.000 0.00 0.00 36.34 2.29
4878 5724 3.004419 AGGGCTGAAAAAGAACTAAACGC 59.996 43.478 0.00 0.00 0.00 4.84
4881 5727 3.900703 GCTGAAAAAGAACTAAACGCTCG 59.099 43.478 0.00 0.00 0.00 5.03
4883 5729 5.721876 TGAAAAAGAACTAAACGCTCGAA 57.278 34.783 0.00 0.00 0.00 3.71
4945 5792 4.634349 CAAAGTCAATGTTTGCAATCGG 57.366 40.909 0.00 0.00 0.00 4.18
5003 5850 2.768253 TCAACTGAGCATCGACCATT 57.232 45.000 0.00 0.00 38.61 3.16
5075 5930 4.571372 ACCGTAGAGTAGCAATTCTAGC 57.429 45.455 0.00 0.00 0.00 3.42
5118 5974 4.502950 GGGAATTCAACATCACTTTTGGCA 60.503 41.667 7.93 0.00 0.00 4.92
5128 5984 4.533919 TCACTTTTGGCAACCCATATTG 57.466 40.909 0.00 0.00 41.78 1.90
5196 6063 2.935955 GGCGTTGACGTCAGTTGG 59.064 61.111 19.11 10.18 44.43 3.77
5197 6064 1.593209 GGCGTTGACGTCAGTTGGA 60.593 57.895 19.11 0.00 44.43 3.53
5198 6065 1.155424 GGCGTTGACGTCAGTTGGAA 61.155 55.000 19.11 0.00 44.43 3.53
5199 6066 0.653636 GCGTTGACGTCAGTTGGAAA 59.346 50.000 19.11 0.00 42.22 3.13
5200 6067 1.332904 GCGTTGACGTCAGTTGGAAAG 60.333 52.381 19.11 6.30 42.22 2.62
5201 6068 1.931172 CGTTGACGTCAGTTGGAAAGT 59.069 47.619 19.11 0.00 34.11 2.66
5202 6069 5.882774 GCGTTGACGTCAGTTGGAAAGTG 62.883 52.174 19.11 0.00 43.29 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.277495 GCCACGACATTTGCAACTGC 61.277 55.000 15.99 8.52 42.50 4.40
1 2 0.311790 AGCCACGACATTTGCAACTG 59.688 50.000 14.64 14.64 0.00 3.16
2 3 0.311790 CAGCCACGACATTTGCAACT 59.688 50.000 0.00 0.00 0.00 3.16
3 4 0.310543 TCAGCCACGACATTTGCAAC 59.689 50.000 0.00 0.00 0.00 4.17
4 5 1.028130 TTCAGCCACGACATTTGCAA 58.972 45.000 0.00 0.00 0.00 4.08
5 6 1.028130 TTTCAGCCACGACATTTGCA 58.972 45.000 0.00 0.00 0.00 4.08
6 7 1.268999 TGTTTCAGCCACGACATTTGC 60.269 47.619 0.00 0.00 0.00 3.68
7 8 2.772568 TGTTTCAGCCACGACATTTG 57.227 45.000 0.00 0.00 0.00 2.32
8 9 2.622942 ACATGTTTCAGCCACGACATTT 59.377 40.909 0.00 0.00 30.78 2.32
9 10 2.229792 ACATGTTTCAGCCACGACATT 58.770 42.857 0.00 0.00 30.78 2.71
10 11 1.896220 ACATGTTTCAGCCACGACAT 58.104 45.000 0.00 0.00 33.27 3.06
11 12 1.333308 CAACATGTTTCAGCCACGACA 59.667 47.619 8.77 0.00 0.00 4.35
12 13 1.334960 CCAACATGTTTCAGCCACGAC 60.335 52.381 8.77 0.00 0.00 4.34
13 14 0.950836 CCAACATGTTTCAGCCACGA 59.049 50.000 8.77 0.00 0.00 4.35
14 15 0.667993 ACCAACATGTTTCAGCCACG 59.332 50.000 8.77 0.00 0.00 4.94
15 16 2.888834 AACCAACATGTTTCAGCCAC 57.111 45.000 8.77 0.00 0.00 5.01
16 17 2.292016 CGTAACCAACATGTTTCAGCCA 59.708 45.455 8.77 0.00 0.00 4.75
17 18 2.351350 CCGTAACCAACATGTTTCAGCC 60.351 50.000 8.77 0.00 0.00 4.85
18 19 2.920647 GCCGTAACCAACATGTTTCAGC 60.921 50.000 8.77 1.80 0.00 4.26
19 20 2.292016 TGCCGTAACCAACATGTTTCAG 59.708 45.455 8.77 3.39 0.00 3.02
20 21 2.292016 CTGCCGTAACCAACATGTTTCA 59.708 45.455 8.77 0.00 0.00 2.69
21 22 2.920647 GCTGCCGTAACCAACATGTTTC 60.921 50.000 8.77 0.00 0.00 2.78
22 23 1.000717 GCTGCCGTAACCAACATGTTT 60.001 47.619 8.77 0.00 0.00 2.83
23 24 0.596082 GCTGCCGTAACCAACATGTT 59.404 50.000 4.92 4.92 0.00 2.71
24 25 0.250727 AGCTGCCGTAACCAACATGT 60.251 50.000 0.00 0.00 0.00 3.21
25 26 0.881118 AAGCTGCCGTAACCAACATG 59.119 50.000 0.00 0.00 0.00 3.21
26 27 1.616159 AAAGCTGCCGTAACCAACAT 58.384 45.000 0.00 0.00 0.00 2.71
27 28 1.394618 AAAAGCTGCCGTAACCAACA 58.605 45.000 0.00 0.00 0.00 3.33
28 29 2.223618 TGAAAAAGCTGCCGTAACCAAC 60.224 45.455 0.00 0.00 0.00 3.77
29 30 2.025155 TGAAAAAGCTGCCGTAACCAA 58.975 42.857 0.00 0.00 0.00 3.67
30 31 1.606668 CTGAAAAAGCTGCCGTAACCA 59.393 47.619 0.00 0.00 0.00 3.67
31 32 1.068541 CCTGAAAAAGCTGCCGTAACC 60.069 52.381 0.00 0.00 0.00 2.85
32 33 1.877443 TCCTGAAAAAGCTGCCGTAAC 59.123 47.619 0.00 0.00 0.00 2.50
33 34 2.151202 CTCCTGAAAAAGCTGCCGTAA 58.849 47.619 0.00 0.00 0.00 3.18
34 35 1.808411 CTCCTGAAAAAGCTGCCGTA 58.192 50.000 0.00 0.00 0.00 4.02
35 36 1.518903 GCTCCTGAAAAAGCTGCCGT 61.519 55.000 0.00 0.00 35.60 5.68
36 37 1.211190 GCTCCTGAAAAAGCTGCCG 59.789 57.895 0.00 0.00 35.60 5.69
37 38 2.651071 AGCTCCTGAAAAAGCTGCC 58.349 52.632 0.00 0.00 46.78 4.85
41 42 2.744202 TCGATGAAGCTCCTGAAAAAGC 59.256 45.455 0.00 0.00 38.84 3.51
42 43 3.126000 GGTCGATGAAGCTCCTGAAAAAG 59.874 47.826 0.00 0.00 0.00 2.27
43 44 3.074412 GGTCGATGAAGCTCCTGAAAAA 58.926 45.455 0.00 0.00 0.00 1.94
44 45 2.699954 GGTCGATGAAGCTCCTGAAAA 58.300 47.619 0.00 0.00 0.00 2.29
45 46 1.404181 CGGTCGATGAAGCTCCTGAAA 60.404 52.381 0.00 0.00 0.00 2.69
46 47 0.173481 CGGTCGATGAAGCTCCTGAA 59.827 55.000 0.00 0.00 0.00 3.02
47 48 1.667154 CCGGTCGATGAAGCTCCTGA 61.667 60.000 0.00 0.00 0.00 3.86
48 49 1.227089 CCGGTCGATGAAGCTCCTG 60.227 63.158 0.00 0.00 0.00 3.86
49 50 1.682684 ACCGGTCGATGAAGCTCCT 60.683 57.895 0.00 0.00 0.00 3.69
50 51 1.519455 CACCGGTCGATGAAGCTCC 60.519 63.158 2.59 0.00 0.00 4.70
51 52 0.802607 GTCACCGGTCGATGAAGCTC 60.803 60.000 2.59 0.00 0.00 4.09
52 53 1.215647 GTCACCGGTCGATGAAGCT 59.784 57.895 2.59 0.00 0.00 3.74
53 54 1.078759 CAGTCACCGGTCGATGAAGC 61.079 60.000 2.59 0.00 0.00 3.86
54 55 0.458543 CCAGTCACCGGTCGATGAAG 60.459 60.000 2.59 0.00 0.00 3.02
55 56 1.183030 ACCAGTCACCGGTCGATGAA 61.183 55.000 2.59 0.00 27.30 2.57
56 57 1.605451 ACCAGTCACCGGTCGATGA 60.605 57.895 2.59 0.00 27.30 2.92
57 58 1.446099 CACCAGTCACCGGTCGATG 60.446 63.158 2.59 2.87 33.25 3.84
58 59 2.970639 CACCAGTCACCGGTCGAT 59.029 61.111 2.59 0.00 33.25 3.59
59 60 3.986006 GCACCAGTCACCGGTCGA 61.986 66.667 2.59 2.87 33.25 4.20
61 62 3.936203 TGGCACCAGTCACCGGTC 61.936 66.667 2.59 0.00 33.25 4.79
62 63 4.250305 GTGGCACCAGTCACCGGT 62.250 66.667 6.29 0.00 44.55 5.28
67 68 2.374525 ACCACAGTGGCACCAGTCA 61.375 57.895 20.48 0.00 42.67 3.41
68 69 1.893808 CACCACAGTGGCACCAGTC 60.894 63.158 20.48 0.00 42.67 3.51
69 70 2.192979 CACCACAGTGGCACCAGT 59.807 61.111 20.48 10.88 42.67 4.00
78 79 5.592282 TCACATTATCACAAAACACCACAGT 59.408 36.000 0.00 0.00 0.00 3.55
79 80 6.070897 TCACATTATCACAAAACACCACAG 57.929 37.500 0.00 0.00 0.00 3.66
80 81 5.507149 GCTCACATTATCACAAAACACCACA 60.507 40.000 0.00 0.00 0.00 4.17
81 82 4.917415 GCTCACATTATCACAAAACACCAC 59.083 41.667 0.00 0.00 0.00 4.16
82 83 4.826733 AGCTCACATTATCACAAAACACCA 59.173 37.500 0.00 0.00 0.00 4.17
83 84 5.182001 AGAGCTCACATTATCACAAAACACC 59.818 40.000 17.77 0.00 0.00 4.16
84 85 6.082338 CAGAGCTCACATTATCACAAAACAC 58.918 40.000 17.77 0.00 0.00 3.32
85 86 5.764686 ACAGAGCTCACATTATCACAAAACA 59.235 36.000 17.77 0.00 0.00 2.83
86 87 6.246420 ACAGAGCTCACATTATCACAAAAC 57.754 37.500 17.77 0.00 0.00 2.43
87 88 6.882610 AACAGAGCTCACATTATCACAAAA 57.117 33.333 17.77 0.00 0.00 2.44
88 89 6.882610 AAACAGAGCTCACATTATCACAAA 57.117 33.333 17.77 0.00 0.00 2.83
89 90 6.934083 TGTAAACAGAGCTCACATTATCACAA 59.066 34.615 17.77 0.00 0.00 3.33
90 91 6.463360 TGTAAACAGAGCTCACATTATCACA 58.537 36.000 17.77 6.41 0.00 3.58
91 92 6.968131 TGTAAACAGAGCTCACATTATCAC 57.032 37.500 17.77 3.86 0.00 3.06
92 93 7.278646 GTCATGTAAACAGAGCTCACATTATCA 59.721 37.037 17.77 11.55 0.00 2.15
93 94 7.278646 TGTCATGTAAACAGAGCTCACATTATC 59.721 37.037 17.77 9.04 0.00 1.75
94 95 7.065085 GTGTCATGTAAACAGAGCTCACATTAT 59.935 37.037 17.77 0.00 0.00 1.28
95 96 6.368791 GTGTCATGTAAACAGAGCTCACATTA 59.631 38.462 17.77 8.60 0.00 1.90
96 97 5.180117 GTGTCATGTAAACAGAGCTCACATT 59.820 40.000 17.77 9.61 0.00 2.71
97 98 4.692625 GTGTCATGTAAACAGAGCTCACAT 59.307 41.667 17.77 13.32 0.00 3.21
98 99 4.058124 GTGTCATGTAAACAGAGCTCACA 58.942 43.478 17.77 11.43 0.00 3.58
99 100 4.058124 TGTGTCATGTAAACAGAGCTCAC 58.942 43.478 17.77 5.27 0.00 3.51
100 101 4.039124 TCTGTGTCATGTAAACAGAGCTCA 59.961 41.667 17.77 0.00 44.01 4.26
101 102 4.560128 TCTGTGTCATGTAAACAGAGCTC 58.440 43.478 17.85 5.27 44.01 4.09
102 103 4.607293 TCTGTGTCATGTAAACAGAGCT 57.393 40.909 17.85 0.00 44.01 4.09
105 106 5.245531 GGGATTCTGTGTCATGTAAACAGA 58.754 41.667 17.85 17.85 46.44 3.41
106 107 4.093408 CGGGATTCTGTGTCATGTAAACAG 59.907 45.833 14.85 14.85 42.17 3.16
107 108 4.000325 CGGGATTCTGTGTCATGTAAACA 59.000 43.478 0.00 0.00 0.00 2.83
108 109 4.000988 ACGGGATTCTGTGTCATGTAAAC 58.999 43.478 0.00 0.00 0.00 2.01
109 110 4.280436 ACGGGATTCTGTGTCATGTAAA 57.720 40.909 0.00 0.00 0.00 2.01
110 111 3.973206 ACGGGATTCTGTGTCATGTAA 57.027 42.857 0.00 0.00 0.00 2.41
111 112 3.259625 TGAACGGGATTCTGTGTCATGTA 59.740 43.478 0.00 0.00 38.25 2.29
112 113 2.038426 TGAACGGGATTCTGTGTCATGT 59.962 45.455 0.00 0.00 38.25 3.21
113 114 2.698803 TGAACGGGATTCTGTGTCATG 58.301 47.619 0.00 0.00 38.25 3.07
114 115 3.055167 TGATGAACGGGATTCTGTGTCAT 60.055 43.478 9.23 9.23 38.25 3.06
115 116 2.301583 TGATGAACGGGATTCTGTGTCA 59.698 45.455 0.00 0.00 38.25 3.58
116 117 2.972625 TGATGAACGGGATTCTGTGTC 58.027 47.619 0.00 0.00 38.25 3.67
117 118 3.055167 TGATGATGAACGGGATTCTGTGT 60.055 43.478 0.00 0.00 38.25 3.72
118 119 3.534554 TGATGATGAACGGGATTCTGTG 58.465 45.455 0.00 0.00 38.25 3.66
119 120 3.801698 CTGATGATGAACGGGATTCTGT 58.198 45.455 0.00 0.00 38.25 3.41
120 121 2.547211 GCTGATGATGAACGGGATTCTG 59.453 50.000 0.00 0.00 38.25 3.02
121 122 2.804572 CGCTGATGATGAACGGGATTCT 60.805 50.000 0.00 0.00 38.25 2.40
122 123 1.528586 CGCTGATGATGAACGGGATTC 59.471 52.381 0.00 0.00 37.88 2.52
123 124 1.586422 CGCTGATGATGAACGGGATT 58.414 50.000 0.00 0.00 0.00 3.01
124 125 0.882042 GCGCTGATGATGAACGGGAT 60.882 55.000 0.00 0.00 0.00 3.85
125 126 1.521457 GCGCTGATGATGAACGGGA 60.521 57.895 0.00 0.00 0.00 5.14
126 127 1.815003 TGCGCTGATGATGAACGGG 60.815 57.895 9.73 0.00 0.00 5.28
127 128 1.349627 GTGCGCTGATGATGAACGG 59.650 57.895 9.73 0.00 0.00 4.44
128 129 1.349627 GGTGCGCTGATGATGAACG 59.650 57.895 9.73 0.00 0.00 3.95
129 130 0.804364 TTGGTGCGCTGATGATGAAC 59.196 50.000 9.73 0.00 0.00 3.18
130 131 1.089112 CTTGGTGCGCTGATGATGAA 58.911 50.000 9.73 0.00 0.00 2.57
131 132 1.371337 GCTTGGTGCGCTGATGATGA 61.371 55.000 9.73 0.00 0.00 2.92
132 133 1.063649 GCTTGGTGCGCTGATGATG 59.936 57.895 9.73 0.00 0.00 3.07
133 134 1.377594 TGCTTGGTGCGCTGATGAT 60.378 52.632 9.73 0.00 46.63 2.45
134 135 2.032376 TGCTTGGTGCGCTGATGA 59.968 55.556 9.73 0.00 46.63 2.92
141 142 3.716006 CTCCACGTGCTTGGTGCG 61.716 66.667 10.91 0.00 46.63 5.34
142 143 1.639298 GATCTCCACGTGCTTGGTGC 61.639 60.000 10.91 0.00 43.25 5.01
143 144 1.354337 CGATCTCCACGTGCTTGGTG 61.354 60.000 10.91 0.00 37.93 4.17
144 145 1.079819 CGATCTCCACGTGCTTGGT 60.080 57.895 10.91 0.00 37.93 3.67
145 146 0.179100 ATCGATCTCCACGTGCTTGG 60.179 55.000 10.91 0.00 38.10 3.61
146 147 1.645034 AATCGATCTCCACGTGCTTG 58.355 50.000 10.91 2.03 0.00 4.01
147 148 2.002586 CAAATCGATCTCCACGTGCTT 58.997 47.619 10.91 0.00 0.00 3.91
148 149 1.645034 CAAATCGATCTCCACGTGCT 58.355 50.000 10.91 0.00 0.00 4.40
149 150 0.026803 GCAAATCGATCTCCACGTGC 59.973 55.000 10.91 0.00 0.00 5.34
150 151 1.061131 GTGCAAATCGATCTCCACGTG 59.939 52.381 9.08 9.08 0.00 4.49
151 152 1.066858 AGTGCAAATCGATCTCCACGT 60.067 47.619 0.00 0.00 0.00 4.49
152 153 1.645034 AGTGCAAATCGATCTCCACG 58.355 50.000 0.00 0.00 0.00 4.94
153 154 3.189287 ACAAAGTGCAAATCGATCTCCAC 59.811 43.478 0.00 6.29 0.00 4.02
154 155 3.189080 CACAAAGTGCAAATCGATCTCCA 59.811 43.478 0.00 0.00 0.00 3.86
155 156 3.751621 CACAAAGTGCAAATCGATCTCC 58.248 45.455 0.00 0.00 0.00 3.71
168 169 3.636043 ACGGTCGCGCACAAAGTG 61.636 61.111 8.75 0.00 36.51 3.16
169 170 3.636043 CACGGTCGCGCACAAAGT 61.636 61.111 8.75 3.99 0.00 2.66
170 171 3.558282 GACACGGTCGCGCACAAAG 62.558 63.158 8.75 3.39 0.00 2.77
171 172 3.632107 GACACGGTCGCGCACAAA 61.632 61.111 8.75 0.00 0.00 2.83
172 173 4.874977 TGACACGGTCGCGCACAA 62.875 61.111 8.75 0.00 34.95 3.33
185 186 2.842462 ACCTCGCCTGTGGTGACA 60.842 61.111 0.00 0.00 40.38 3.58
186 187 2.048127 GACCTCGCCTGTGGTGAC 60.048 66.667 0.00 0.00 41.91 3.67
187 188 3.311110 GGACCTCGCCTGTGGTGA 61.311 66.667 0.00 0.00 41.91 4.02
188 189 4.742201 CGGACCTCGCCTGTGGTG 62.742 72.222 0.00 0.00 41.91 4.17
193 194 4.452733 GAACCCGGACCTCGCCTG 62.453 72.222 0.73 0.00 37.59 4.85
194 195 4.698625 AGAACCCGGACCTCGCCT 62.699 66.667 0.73 0.00 37.59 5.52
195 196 3.660732 GAAGAACCCGGACCTCGCC 62.661 68.421 0.73 0.00 37.59 5.54
196 197 2.125633 GAAGAACCCGGACCTCGC 60.126 66.667 0.73 0.00 37.59 5.03
197 198 1.080025 GTGAAGAACCCGGACCTCG 60.080 63.158 0.73 0.00 38.88 4.63
198 199 1.080025 CGTGAAGAACCCGGACCTC 60.080 63.158 0.73 0.00 0.00 3.85
199 200 1.405272 AACGTGAAGAACCCGGACCT 61.405 55.000 0.73 0.00 0.00 3.85
200 201 0.947660 GAACGTGAAGAACCCGGACC 60.948 60.000 0.73 0.00 0.00 4.46
201 202 0.947660 GGAACGTGAAGAACCCGGAC 60.948 60.000 0.73 0.00 0.00 4.79
202 203 1.368579 GGAACGTGAAGAACCCGGA 59.631 57.895 0.73 0.00 0.00 5.14
203 204 3.961729 GGAACGTGAAGAACCCGG 58.038 61.111 0.00 0.00 0.00 5.73
216 217 3.975035 GCAAATTGTGAAGAACTCGGAAC 59.025 43.478 0.00 0.00 0.00 3.62
217 218 3.303725 CGCAAATTGTGAAGAACTCGGAA 60.304 43.478 0.00 0.00 0.00 4.30
218 219 2.223144 CGCAAATTGTGAAGAACTCGGA 59.777 45.455 0.00 0.00 0.00 4.55
219 220 2.574322 CGCAAATTGTGAAGAACTCGG 58.426 47.619 0.00 0.00 0.00 4.63
220 221 2.223144 TCCGCAAATTGTGAAGAACTCG 59.777 45.455 8.26 0.00 0.00 4.18
221 222 3.003275 TGTCCGCAAATTGTGAAGAACTC 59.997 43.478 8.26 0.00 0.00 3.01
222 223 2.948979 TGTCCGCAAATTGTGAAGAACT 59.051 40.909 8.26 0.00 0.00 3.01
223 224 3.347958 TGTCCGCAAATTGTGAAGAAC 57.652 42.857 8.26 1.94 0.00 3.01
224 225 4.582701 AATGTCCGCAAATTGTGAAGAA 57.417 36.364 8.26 0.00 0.00 2.52
225 226 4.582701 AAATGTCCGCAAATTGTGAAGA 57.417 36.364 8.26 0.00 0.00 2.87
226 227 4.744137 TGAAAATGTCCGCAAATTGTGAAG 59.256 37.500 8.26 0.00 0.00 3.02
227 228 4.505922 GTGAAAATGTCCGCAAATTGTGAA 59.494 37.500 8.26 0.00 0.00 3.18
228 229 4.047822 GTGAAAATGTCCGCAAATTGTGA 58.952 39.130 8.26 0.00 0.00 3.58
229 230 3.184178 GGTGAAAATGTCCGCAAATTGTG 59.816 43.478 0.00 0.00 0.00 3.33
230 231 3.181471 TGGTGAAAATGTCCGCAAATTGT 60.181 39.130 0.00 0.00 0.00 2.71
231 232 3.388308 TGGTGAAAATGTCCGCAAATTG 58.612 40.909 0.00 0.00 0.00 2.32
232 233 3.742433 TGGTGAAAATGTCCGCAAATT 57.258 38.095 0.00 0.00 0.00 1.82
233 234 3.742433 TTGGTGAAAATGTCCGCAAAT 57.258 38.095 0.00 0.00 0.00 2.32
234 235 3.452474 CTTTGGTGAAAATGTCCGCAAA 58.548 40.909 0.00 0.00 0.00 3.68
235 236 2.223923 CCTTTGGTGAAAATGTCCGCAA 60.224 45.455 0.00 0.00 0.00 4.85
236 237 1.339610 CCTTTGGTGAAAATGTCCGCA 59.660 47.619 0.00 0.00 0.00 5.69
237 238 1.611491 TCCTTTGGTGAAAATGTCCGC 59.389 47.619 0.00 0.00 0.00 5.54
238 239 4.236935 CAATCCTTTGGTGAAAATGTCCG 58.763 43.478 0.00 0.00 0.00 4.79
239 240 3.996363 GCAATCCTTTGGTGAAAATGTCC 59.004 43.478 0.00 0.00 33.22 4.02
240 241 3.996363 GGCAATCCTTTGGTGAAAATGTC 59.004 43.478 0.00 0.00 33.22 3.06
241 242 3.390639 TGGCAATCCTTTGGTGAAAATGT 59.609 39.130 0.00 0.00 33.22 2.71
242 243 4.005487 TGGCAATCCTTTGGTGAAAATG 57.995 40.909 0.00 0.00 33.22 2.32
243 244 4.835678 GATGGCAATCCTTTGGTGAAAAT 58.164 39.130 0.00 0.00 33.22 1.82
244 245 4.270245 GATGGCAATCCTTTGGTGAAAA 57.730 40.909 0.00 0.00 33.22 2.29
245 246 3.959535 GATGGCAATCCTTTGGTGAAA 57.040 42.857 0.00 0.00 33.22 2.69
256 257 1.773653 AGAAGAGAGGGGATGGCAATC 59.226 52.381 0.00 0.00 0.00 2.67
257 258 1.904440 AGAAGAGAGGGGATGGCAAT 58.096 50.000 0.00 0.00 0.00 3.56
258 259 1.283029 CAAGAAGAGAGGGGATGGCAA 59.717 52.381 0.00 0.00 0.00 4.52
259 260 0.914644 CAAGAAGAGAGGGGATGGCA 59.085 55.000 0.00 0.00 0.00 4.92
260 261 0.182299 CCAAGAAGAGAGGGGATGGC 59.818 60.000 0.00 0.00 0.00 4.40
261 262 1.885049 TCCAAGAAGAGAGGGGATGG 58.115 55.000 0.00 0.00 0.00 3.51
262 263 4.516652 AAATCCAAGAAGAGAGGGGATG 57.483 45.455 0.00 0.00 38.33 3.51
263 264 4.384647 CGAAAATCCAAGAAGAGAGGGGAT 60.385 45.833 0.00 0.00 39.97 3.85
264 265 3.055094 CGAAAATCCAAGAAGAGAGGGGA 60.055 47.826 0.00 0.00 0.00 4.81
265 266 3.274288 CGAAAATCCAAGAAGAGAGGGG 58.726 50.000 0.00 0.00 0.00 4.79
266 267 3.274288 CCGAAAATCCAAGAAGAGAGGG 58.726 50.000 0.00 0.00 0.00 4.30
267 268 3.055094 TCCCGAAAATCCAAGAAGAGAGG 60.055 47.826 0.00 0.00 0.00 3.69
268 269 3.935828 GTCCCGAAAATCCAAGAAGAGAG 59.064 47.826 0.00 0.00 0.00 3.20
269 270 3.326588 TGTCCCGAAAATCCAAGAAGAGA 59.673 43.478 0.00 0.00 0.00 3.10
270 271 3.674997 TGTCCCGAAAATCCAAGAAGAG 58.325 45.455 0.00 0.00 0.00 2.85
271 272 3.072476 ACTGTCCCGAAAATCCAAGAAGA 59.928 43.478 0.00 0.00 0.00 2.87
272 273 3.412386 ACTGTCCCGAAAATCCAAGAAG 58.588 45.455 0.00 0.00 0.00 2.85
273 274 3.072476 AGACTGTCCCGAAAATCCAAGAA 59.928 43.478 3.76 0.00 0.00 2.52
274 275 2.637872 AGACTGTCCCGAAAATCCAAGA 59.362 45.455 3.76 0.00 0.00 3.02
275 276 3.059352 AGACTGTCCCGAAAATCCAAG 57.941 47.619 3.76 0.00 0.00 3.61
276 277 3.502123 AAGACTGTCCCGAAAATCCAA 57.498 42.857 3.76 0.00 0.00 3.53
277 278 4.202377 TGTTAAGACTGTCCCGAAAATCCA 60.202 41.667 3.76 0.00 0.00 3.41
278 279 4.320870 TGTTAAGACTGTCCCGAAAATCC 58.679 43.478 3.76 0.00 0.00 3.01
279 280 6.496338 AATGTTAAGACTGTCCCGAAAATC 57.504 37.500 3.76 0.00 0.00 2.17
280 281 5.121768 CGAATGTTAAGACTGTCCCGAAAAT 59.878 40.000 3.76 0.00 0.00 1.82
281 282 4.449743 CGAATGTTAAGACTGTCCCGAAAA 59.550 41.667 3.76 0.00 0.00 2.29
282 283 3.991773 CGAATGTTAAGACTGTCCCGAAA 59.008 43.478 3.76 0.00 0.00 3.46
283 284 3.006110 ACGAATGTTAAGACTGTCCCGAA 59.994 43.478 3.76 0.00 0.00 4.30
284 285 2.559668 ACGAATGTTAAGACTGTCCCGA 59.440 45.455 3.76 0.00 0.00 5.14
285 286 2.666508 CACGAATGTTAAGACTGTCCCG 59.333 50.000 3.76 0.00 0.00 5.14
286 287 3.000727 CCACGAATGTTAAGACTGTCCC 58.999 50.000 3.76 0.00 0.00 4.46
287 288 3.678548 GTCCACGAATGTTAAGACTGTCC 59.321 47.826 3.76 0.00 0.00 4.02
288 289 3.364023 CGTCCACGAATGTTAAGACTGTC 59.636 47.826 0.00 0.00 43.02 3.51
289 290 3.314553 CGTCCACGAATGTTAAGACTGT 58.685 45.455 0.00 0.00 43.02 3.55
290 291 2.092211 GCGTCCACGAATGTTAAGACTG 59.908 50.000 2.58 0.00 43.02 3.51
291 292 2.334838 GCGTCCACGAATGTTAAGACT 58.665 47.619 2.58 0.00 43.02 3.24
292 293 1.392510 GGCGTCCACGAATGTTAAGAC 59.607 52.381 2.58 0.00 43.02 3.01
293 294 1.673626 GGGCGTCCACGAATGTTAAGA 60.674 52.381 0.00 0.00 43.02 2.10
294 295 0.725117 GGGCGTCCACGAATGTTAAG 59.275 55.000 0.00 0.00 43.02 1.85
295 296 1.015085 CGGGCGTCCACGAATGTTAA 61.015 55.000 6.96 0.00 43.02 2.01
296 297 1.446445 CGGGCGTCCACGAATGTTA 60.446 57.895 6.96 0.00 43.02 2.41
297 298 2.740826 CGGGCGTCCACGAATGTT 60.741 61.111 6.96 0.00 43.02 2.71
298 299 2.999739 AAACGGGCGTCCACGAATGT 63.000 55.000 6.96 0.00 43.02 2.71
299 300 1.015085 TAAACGGGCGTCCACGAATG 61.015 55.000 6.96 0.00 43.02 2.67
300 301 1.015607 GTAAACGGGCGTCCACGAAT 61.016 55.000 6.96 0.00 43.02 3.34
301 302 1.664333 GTAAACGGGCGTCCACGAA 60.664 57.895 6.96 0.00 43.02 3.85
302 303 2.049248 GTAAACGGGCGTCCACGA 60.049 61.111 6.96 0.00 43.02 4.35
303 304 3.472298 CGTAAACGGGCGTCCACG 61.472 66.667 6.96 4.19 37.85 4.94
304 305 2.049248 TCGTAAACGGGCGTCCAC 60.049 61.111 6.96 0.00 40.29 4.02
305 306 2.049248 GTCGTAAACGGGCGTCCA 60.049 61.111 6.96 0.00 40.29 4.02
306 307 2.090524 CAGTCGTAAACGGGCGTCC 61.091 63.158 0.00 0.00 40.29 4.79
307 308 1.069378 CTCAGTCGTAAACGGGCGTC 61.069 60.000 2.24 0.00 40.29 5.19
308 309 1.080974 CTCAGTCGTAAACGGGCGT 60.081 57.895 2.24 0.00 40.29 5.68
309 310 1.804326 CCTCAGTCGTAAACGGGCG 60.804 63.158 2.24 0.00 40.29 6.13
310 311 1.447314 CCCTCAGTCGTAAACGGGC 60.447 63.158 2.24 0.00 40.29 6.13
311 312 0.172803 CTCCCTCAGTCGTAAACGGG 59.827 60.000 2.24 0.00 40.29 5.28
312 313 0.172803 CCTCCCTCAGTCGTAAACGG 59.827 60.000 2.24 0.00 40.29 4.44
313 314 0.172803 CCCTCCCTCAGTCGTAAACG 59.827 60.000 0.00 0.00 41.45 3.60
314 315 1.067071 CACCCTCCCTCAGTCGTAAAC 60.067 57.143 0.00 0.00 0.00 2.01
315 316 1.263356 CACCCTCCCTCAGTCGTAAA 58.737 55.000 0.00 0.00 0.00 2.01
316 317 0.113776 ACACCCTCCCTCAGTCGTAA 59.886 55.000 0.00 0.00 0.00 3.18
317 318 0.113776 AACACCCTCCCTCAGTCGTA 59.886 55.000 0.00 0.00 0.00 3.43
318 319 0.113776 TAACACCCTCCCTCAGTCGT 59.886 55.000 0.00 0.00 0.00 4.34
319 320 0.818296 CTAACACCCTCCCTCAGTCG 59.182 60.000 0.00 0.00 0.00 4.18
320 321 2.233305 TCTAACACCCTCCCTCAGTC 57.767 55.000 0.00 0.00 0.00 3.51
321 322 2.715763 TTCTAACACCCTCCCTCAGT 57.284 50.000 0.00 0.00 0.00 3.41
322 323 8.532819 GTTATATATTCTAACACCCTCCCTCAG 58.467 40.741 0.00 0.00 0.00 3.35
323 324 7.456902 GGTTATATATTCTAACACCCTCCCTCA 59.543 40.741 0.00 0.00 31.98 3.86
324 325 7.363617 CGGTTATATATTCTAACACCCTCCCTC 60.364 44.444 0.00 0.00 31.98 4.30
325 326 6.439692 CGGTTATATATTCTAACACCCTCCCT 59.560 42.308 0.00 0.00 31.98 4.20
326 327 6.212187 ACGGTTATATATTCTAACACCCTCCC 59.788 42.308 0.00 0.00 31.98 4.30
327 328 7.237209 ACGGTTATATATTCTAACACCCTCC 57.763 40.000 0.00 0.00 31.98 4.30
346 347 8.671921 CCGTATATCTATACACAGAATACGGTT 58.328 37.037 22.18 0.00 44.44 4.44
347 348 8.206325 CCGTATATCTATACACAGAATACGGT 57.794 38.462 22.18 0.00 44.44 4.83
349 350 9.486857 CAACCGTATATCTATACACAGAATACG 57.513 37.037 7.84 14.18 39.08 3.06
363 364 8.954350 GGACTACACATATACAACCGTATATCT 58.046 37.037 2.81 0.00 44.53 1.98
364 365 8.954350 AGGACTACACATATACAACCGTATATC 58.046 37.037 2.81 0.00 44.53 1.63
366 367 8.570488 CAAGGACTACACATATACAACCGTATA 58.430 37.037 0.00 0.00 43.16 1.47
367 368 7.069085 ACAAGGACTACACATATACAACCGTAT 59.931 37.037 0.00 0.00 41.34 3.06
368 369 6.377996 ACAAGGACTACACATATACAACCGTA 59.622 38.462 0.00 0.00 0.00 4.02
369 370 5.186409 ACAAGGACTACACATATACAACCGT 59.814 40.000 0.00 0.00 0.00 4.83
370 371 5.657474 ACAAGGACTACACATATACAACCG 58.343 41.667 0.00 0.00 0.00 4.44
371 372 9.909644 CTATACAAGGACTACACATATACAACC 57.090 37.037 0.00 0.00 0.00 3.77
389 390 7.747799 CGTACAATATACGGACACCTATACAAG 59.252 40.741 0.00 0.00 37.29 3.16
390 391 7.443879 TCGTACAATATACGGACACCTATACAA 59.556 37.037 6.63 0.00 40.90 2.41
391 392 6.934083 TCGTACAATATACGGACACCTATACA 59.066 38.462 6.63 0.00 40.90 2.29
392 393 7.364522 TCGTACAATATACGGACACCTATAC 57.635 40.000 6.63 0.00 40.90 1.47
393 394 9.098355 GTATCGTACAATATACGGACACCTATA 57.902 37.037 6.63 0.00 40.90 1.31
394 395 7.201556 CGTATCGTACAATATACGGACACCTAT 60.202 40.741 17.94 0.00 44.43 2.57
395 396 6.090763 CGTATCGTACAATATACGGACACCTA 59.909 42.308 17.94 0.00 44.43 3.08
396 397 5.106948 CGTATCGTACAATATACGGACACCT 60.107 44.000 17.94 0.00 44.43 4.00
397 398 5.082059 CGTATCGTACAATATACGGACACC 58.918 45.833 17.94 0.00 44.43 4.16
398 399 5.915857 TCGTATCGTACAATATACGGACAC 58.084 41.667 22.13 2.50 46.79 3.67
399 400 6.538189 TTCGTATCGTACAATATACGGACA 57.462 37.500 22.13 11.10 46.79 4.02
401 402 6.646653 AGAGTTCGTATCGTACAATATACGGA 59.353 38.462 22.13 15.96 46.79 4.69
402 403 6.735510 CAGAGTTCGTATCGTACAATATACGG 59.264 42.308 22.13 11.03 46.79 4.02
404 405 6.522510 GGCAGAGTTCGTATCGTACAATATAC 59.477 42.308 0.00 0.00 29.93 1.47
405 406 6.429078 AGGCAGAGTTCGTATCGTACAATATA 59.571 38.462 0.00 0.00 29.93 0.86
406 407 5.241064 AGGCAGAGTTCGTATCGTACAATAT 59.759 40.000 0.00 0.00 29.93 1.28
407 408 4.577693 AGGCAGAGTTCGTATCGTACAATA 59.422 41.667 0.00 0.00 29.93 1.90
408 409 3.380637 AGGCAGAGTTCGTATCGTACAAT 59.619 43.478 0.00 0.00 29.93 2.71
409 410 2.751259 AGGCAGAGTTCGTATCGTACAA 59.249 45.455 0.00 0.00 29.93 2.41
410 411 2.362736 AGGCAGAGTTCGTATCGTACA 58.637 47.619 0.00 0.00 29.93 2.90
411 412 3.106672 CAAGGCAGAGTTCGTATCGTAC 58.893 50.000 0.00 0.00 0.00 3.67
412 413 2.751259 ACAAGGCAGAGTTCGTATCGTA 59.249 45.455 0.00 0.00 0.00 3.43
413 414 1.544691 ACAAGGCAGAGTTCGTATCGT 59.455 47.619 0.00 0.00 0.00 3.73
414 415 2.279582 ACAAGGCAGAGTTCGTATCG 57.720 50.000 0.00 0.00 0.00 2.92
415 416 3.864003 GGTTACAAGGCAGAGTTCGTATC 59.136 47.826 0.00 0.00 0.00 2.24
416 417 3.514309 AGGTTACAAGGCAGAGTTCGTAT 59.486 43.478 0.00 0.00 0.00 3.06
417 418 2.895404 AGGTTACAAGGCAGAGTTCGTA 59.105 45.455 0.00 0.00 0.00 3.43
418 419 1.692519 AGGTTACAAGGCAGAGTTCGT 59.307 47.619 0.00 0.00 0.00 3.85
419 420 2.069273 CAGGTTACAAGGCAGAGTTCG 58.931 52.381 0.00 0.00 0.00 3.95
420 421 3.127425 ACAGGTTACAAGGCAGAGTTC 57.873 47.619 0.00 0.00 0.00 3.01
421 422 4.910458 ATACAGGTTACAAGGCAGAGTT 57.090 40.909 0.00 0.00 0.00 3.01
422 423 7.857404 ATATATACAGGTTACAAGGCAGAGT 57.143 36.000 0.00 0.00 0.00 3.24
423 424 8.367911 TCAATATATACAGGTTACAAGGCAGAG 58.632 37.037 0.00 0.00 0.00 3.35
424 425 8.257602 TCAATATATACAGGTTACAAGGCAGA 57.742 34.615 0.00 0.00 0.00 4.26
425 426 9.155975 GATCAATATATACAGGTTACAAGGCAG 57.844 37.037 0.00 0.00 0.00 4.85
426 427 8.655901 TGATCAATATATACAGGTTACAAGGCA 58.344 33.333 0.00 0.00 0.00 4.75
427 428 9.502091 TTGATCAATATATACAGGTTACAAGGC 57.498 33.333 3.38 0.00 0.00 4.35
435 436 9.672673 GCCTTGTATTGATCAATATATACAGGT 57.327 33.333 26.66 4.03 35.57 4.00
436 437 9.671279 TGCCTTGTATTGATCAATATATACAGG 57.329 33.333 26.66 25.06 35.57 4.00
438 439 9.448438 GGTGCCTTGTATTGATCAATATATACA 57.552 33.333 26.66 20.52 35.90 2.29
439 440 9.448438 TGGTGCCTTGTATTGATCAATATATAC 57.552 33.333 26.66 18.47 35.90 1.47
440 441 9.448438 GTGGTGCCTTGTATTGATCAATATATA 57.552 33.333 26.66 15.60 35.90 0.86
441 442 7.944000 TGTGGTGCCTTGTATTGATCAATATAT 59.056 33.333 26.66 7.86 35.90 0.86
442 443 7.286313 TGTGGTGCCTTGTATTGATCAATATA 58.714 34.615 26.66 22.30 35.90 0.86
443 444 6.128486 TGTGGTGCCTTGTATTGATCAATAT 58.872 36.000 26.66 8.92 35.90 1.28
444 445 5.504853 TGTGGTGCCTTGTATTGATCAATA 58.495 37.500 21.67 21.67 32.50 1.90
445 446 4.343231 TGTGGTGCCTTGTATTGATCAAT 58.657 39.130 23.75 23.75 34.93 2.57
446 447 3.760738 TGTGGTGCCTTGTATTGATCAA 58.239 40.909 11.26 11.26 0.00 2.57
447 448 3.431673 TGTGGTGCCTTGTATTGATCA 57.568 42.857 0.00 0.00 0.00 2.92
448 449 3.426159 CGTTGTGGTGCCTTGTATTGATC 60.426 47.826 0.00 0.00 0.00 2.92
449 450 2.487762 CGTTGTGGTGCCTTGTATTGAT 59.512 45.455 0.00 0.00 0.00 2.57
450 451 1.876799 CGTTGTGGTGCCTTGTATTGA 59.123 47.619 0.00 0.00 0.00 2.57
451 452 1.606668 ACGTTGTGGTGCCTTGTATTG 59.393 47.619 0.00 0.00 0.00 1.90
452 453 1.606668 CACGTTGTGGTGCCTTGTATT 59.393 47.619 0.00 0.00 0.00 1.89
453 454 1.234821 CACGTTGTGGTGCCTTGTAT 58.765 50.000 0.00 0.00 0.00 2.29
454 455 0.107606 ACACGTTGTGGTGCCTTGTA 60.108 50.000 1.64 0.00 41.65 2.41
455 456 1.377987 ACACGTTGTGGTGCCTTGT 60.378 52.632 1.64 0.00 41.65 3.16
456 457 1.063972 CACACGTTGTGGTGCCTTG 59.936 57.895 9.43 0.00 44.27 3.61
457 458 3.508474 CACACGTTGTGGTGCCTT 58.492 55.556 9.43 0.00 44.27 4.35
475 476 3.367395 GCTGCTTGTAAGATTGGGGAAAC 60.367 47.826 0.00 0.00 0.00 2.78
476 477 2.825532 GCTGCTTGTAAGATTGGGGAAA 59.174 45.455 0.00 0.00 0.00 3.13
477 478 2.041620 AGCTGCTTGTAAGATTGGGGAA 59.958 45.455 0.00 0.00 0.00 3.97
478 479 1.635487 AGCTGCTTGTAAGATTGGGGA 59.365 47.619 0.00 0.00 0.00 4.81
479 480 2.019984 GAGCTGCTTGTAAGATTGGGG 58.980 52.381 2.53 0.00 0.00 4.96
480 481 2.715046 TGAGCTGCTTGTAAGATTGGG 58.285 47.619 2.53 0.00 0.00 4.12
481 482 4.005650 TCTTGAGCTGCTTGTAAGATTGG 58.994 43.478 16.01 0.00 0.00 3.16
482 483 5.618056 TTCTTGAGCTGCTTGTAAGATTG 57.382 39.130 18.82 1.58 0.00 2.67
483 484 5.876612 CTTCTTGAGCTGCTTGTAAGATT 57.123 39.130 18.82 0.00 0.00 2.40
514 515 9.660180 AAACAAAGAGATTAGCTAAGTTAGAGG 57.340 33.333 14.27 2.57 0.00 3.69
562 563 1.068474 CTCGGTTCGCTCGATTGTTT 58.932 50.000 0.00 0.00 36.01 2.83
587 588 7.009179 TCCATCACAAAGACTTCAACTATCT 57.991 36.000 0.00 0.00 0.00 1.98
714 715 8.233868 TGAAAAAGTAACCATGTCGATGTAATG 58.766 33.333 0.00 0.00 0.00 1.90
715 716 8.330466 TGAAAAAGTAACCATGTCGATGTAAT 57.670 30.769 0.00 0.00 0.00 1.89
736 749 3.581755 AGCTAATGTTACGTCGCTGAAA 58.418 40.909 0.00 0.00 0.00 2.69
739 752 1.513178 CGAGCTAATGTTACGTCGCTG 59.487 52.381 0.00 0.00 0.00 5.18
741 754 1.818850 TCGAGCTAATGTTACGTCGC 58.181 50.000 0.00 0.00 0.00 5.19
748 761 5.067283 ACAAAAGTGGTTTCGAGCTAATGTT 59.933 36.000 0.00 0.00 0.00 2.71
831 846 0.541764 TGGTCCTGGATTGCCAAACC 60.542 55.000 0.00 0.00 45.41 3.27
834 849 1.358787 AGATTGGTCCTGGATTGCCAA 59.641 47.619 16.80 16.80 45.41 4.52
836 851 2.173569 AGTAGATTGGTCCTGGATTGCC 59.826 50.000 0.00 0.00 0.00 4.52
944 977 1.450312 CCCGATGCTCTGTCCCAAC 60.450 63.158 0.00 0.00 0.00 3.77
967 1000 1.271840 GGGAAAGGGGGAAAATGGCC 61.272 60.000 0.00 0.00 0.00 5.36
1302 1335 2.527875 GGGCCGGAGAGGATGGAT 60.528 66.667 5.05 0.00 45.00 3.41
1374 1407 5.400589 AAGTTGGCACTGAAGACGAAGTTT 61.401 41.667 0.00 0.00 34.46 2.66
1554 1587 2.459086 GCTCCCATCATGGCTCCCT 61.459 63.158 0.00 0.00 35.79 4.20
1621 1654 1.618640 GCTGGCTTCTTGTCGTCGTC 61.619 60.000 0.00 0.00 0.00 4.20
1622 1655 1.664965 GCTGGCTTCTTGTCGTCGT 60.665 57.895 0.00 0.00 0.00 4.34
1623 1656 2.720758 CGCTGGCTTCTTGTCGTCG 61.721 63.158 0.00 0.00 0.00 5.12
1665 1698 2.352960 GACGAGGATGAACTTGCCATTC 59.647 50.000 0.00 0.00 0.00 2.67
1735 1768 7.040548 GGAGTACTTATGAAATAGCGGAGTACT 60.041 40.741 11.71 11.71 45.41 2.73
1736 1769 7.083230 GGAGTACTTATGAAATAGCGGAGTAC 58.917 42.308 0.00 0.00 38.65 2.73
1737 1770 6.208204 GGGAGTACTTATGAAATAGCGGAGTA 59.792 42.308 0.00 0.00 0.00 2.59
1738 1771 5.010820 GGGAGTACTTATGAAATAGCGGAGT 59.989 44.000 0.00 0.00 0.00 3.85
1739 1772 5.244178 AGGGAGTACTTATGAAATAGCGGAG 59.756 44.000 0.00 0.00 0.00 4.63
1740 1773 5.145564 AGGGAGTACTTATGAAATAGCGGA 58.854 41.667 0.00 0.00 0.00 5.54
1741 1774 5.470047 AGGGAGTACTTATGAAATAGCGG 57.530 43.478 0.00 0.00 0.00 5.52
1742 1775 5.471257 GGAGGGAGTACTTATGAAATAGCG 58.529 45.833 0.00 0.00 0.00 4.26
1743 1776 5.010820 ACGGAGGGAGTACTTATGAAATAGC 59.989 44.000 0.00 0.00 0.00 2.97
1744 1777 6.651975 ACGGAGGGAGTACTTATGAAATAG 57.348 41.667 0.00 0.00 0.00 1.73
1745 1778 6.041296 GGAACGGAGGGAGTACTTATGAAATA 59.959 42.308 0.00 0.00 0.00 1.40
1746 1779 5.163332 GGAACGGAGGGAGTACTTATGAAAT 60.163 44.000 0.00 0.00 0.00 2.17
1747 1780 4.161001 GGAACGGAGGGAGTACTTATGAAA 59.839 45.833 0.00 0.00 0.00 2.69
1748 1781 3.703052 GGAACGGAGGGAGTACTTATGAA 59.297 47.826 0.00 0.00 0.00 2.57
1749 1782 3.053095 AGGAACGGAGGGAGTACTTATGA 60.053 47.826 0.00 0.00 0.00 2.15
1750 1783 3.297736 AGGAACGGAGGGAGTACTTATG 58.702 50.000 0.00 0.00 0.00 1.90
1751 1784 3.684408 AGGAACGGAGGGAGTACTTAT 57.316 47.619 0.00 0.00 0.00 1.73
1752 1785 4.591321 TTAGGAACGGAGGGAGTACTTA 57.409 45.455 0.00 0.00 0.00 2.24
1753 1786 3.463048 TTAGGAACGGAGGGAGTACTT 57.537 47.619 0.00 0.00 0.00 2.24
1754 1787 3.463048 TTTAGGAACGGAGGGAGTACT 57.537 47.619 0.00 0.00 0.00 2.73
1755 1788 7.232330 ACTTATATTTAGGAACGGAGGGAGTAC 59.768 40.741 0.00 0.00 0.00 2.73
1756 1789 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
1757 1790 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
1758 1791 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
1759 1792 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
1811 1844 9.944376 ACTTAAAATGCATCTATATACATCCGT 57.056 29.630 0.00 0.00 0.00 4.69
1820 1853 9.625747 TGAATCCACACTTAAAATGCATCTATA 57.374 29.630 0.00 0.00 0.00 1.31
1821 1854 8.523915 TGAATCCACACTTAAAATGCATCTAT 57.476 30.769 0.00 0.00 0.00 1.98
1822 1855 7.936496 TGAATCCACACTTAAAATGCATCTA 57.064 32.000 0.00 0.00 0.00 1.98
1823 1856 6.839124 TGAATCCACACTTAAAATGCATCT 57.161 33.333 0.00 0.00 0.00 2.90
1824 1857 7.760794 TGAATGAATCCACACTTAAAATGCATC 59.239 33.333 0.00 0.00 0.00 3.91
1825 1858 7.613585 TGAATGAATCCACACTTAAAATGCAT 58.386 30.769 0.00 0.00 0.00 3.96
1826 1859 6.990798 TGAATGAATCCACACTTAAAATGCA 58.009 32.000 0.00 0.00 0.00 3.96
1827 1860 8.483307 AATGAATGAATCCACACTTAAAATGC 57.517 30.769 0.00 0.00 0.00 3.56
1830 1863 8.772705 GCAAAATGAATGAATCCACACTTAAAA 58.227 29.630 0.00 0.00 0.00 1.52
1831 1864 8.149647 AGCAAAATGAATGAATCCACACTTAAA 58.850 29.630 0.00 0.00 0.00 1.52
1832 1865 7.669427 AGCAAAATGAATGAATCCACACTTAA 58.331 30.769 0.00 0.00 0.00 1.85
1833 1866 7.230849 AGCAAAATGAATGAATCCACACTTA 57.769 32.000 0.00 0.00 0.00 2.24
1834 1867 6.105397 AGCAAAATGAATGAATCCACACTT 57.895 33.333 0.00 0.00 0.00 3.16
1835 1868 5.337009 GGAGCAAAATGAATGAATCCACACT 60.337 40.000 0.00 0.00 0.00 3.55
1836 1869 4.866486 GGAGCAAAATGAATGAATCCACAC 59.134 41.667 0.00 0.00 0.00 3.82
1837 1870 4.380761 CGGAGCAAAATGAATGAATCCACA 60.381 41.667 0.00 0.00 0.00 4.17
1838 1871 4.107622 CGGAGCAAAATGAATGAATCCAC 58.892 43.478 0.00 0.00 0.00 4.02
1839 1872 3.763360 ACGGAGCAAAATGAATGAATCCA 59.237 39.130 0.00 0.00 0.00 3.41
1840 1873 4.376340 ACGGAGCAAAATGAATGAATCC 57.624 40.909 0.00 0.00 0.00 3.01
1841 1874 6.498304 ACATACGGAGCAAAATGAATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
1842 1875 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
1843 1876 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
1844 1877 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
1845 1878 6.363577 ACTACATACGGAGCAAAATGAATG 57.636 37.500 0.00 0.00 0.00 2.67
1846 1879 5.527582 GGACTACATACGGAGCAAAATGAAT 59.472 40.000 0.00 0.00 0.00 2.57
1847 1880 4.873827 GGACTACATACGGAGCAAAATGAA 59.126 41.667 0.00 0.00 0.00 2.57
1848 1881 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
1849 1882 4.034048 GTGGACTACATACGGAGCAAAATG 59.966 45.833 0.00 0.00 0.00 2.32
1850 1883 4.189231 GTGGACTACATACGGAGCAAAAT 58.811 43.478 0.00 0.00 0.00 1.82
1851 1884 3.592059 GTGGACTACATACGGAGCAAAA 58.408 45.455 0.00 0.00 0.00 2.44
1852 1885 2.093869 GGTGGACTACATACGGAGCAAA 60.094 50.000 0.00 0.00 0.00 3.68
1853 1886 1.479323 GGTGGACTACATACGGAGCAA 59.521 52.381 0.00 0.00 0.00 3.91
1854 1887 1.108776 GGTGGACTACATACGGAGCA 58.891 55.000 0.00 0.00 0.00 4.26
1855 1888 1.400737 AGGTGGACTACATACGGAGC 58.599 55.000 0.00 0.00 0.00 4.70
1856 1889 3.564644 CACTAGGTGGACTACATACGGAG 59.435 52.174 0.00 0.00 0.00 4.63
1857 1890 3.548770 CACTAGGTGGACTACATACGGA 58.451 50.000 0.00 0.00 0.00 4.69
1858 1891 3.984508 CACTAGGTGGACTACATACGG 57.015 52.381 0.00 0.00 0.00 4.02
1870 1903 6.153680 AGTCTTTGTAGAGATTCCACTAGGTG 59.846 42.308 0.00 0.00 35.89 4.00
1871 1904 6.257586 AGTCTTTGTAGAGATTCCACTAGGT 58.742 40.000 0.00 0.00 35.89 3.08
1872 1905 6.783708 AGTCTTTGTAGAGATTCCACTAGG 57.216 41.667 0.00 0.00 0.00 3.02
1873 1906 8.740906 TGTAAGTCTTTGTAGAGATTCCACTAG 58.259 37.037 0.00 0.00 0.00 2.57
1874 1907 8.645814 TGTAAGTCTTTGTAGAGATTCCACTA 57.354 34.615 0.00 0.00 0.00 2.74
1875 1908 7.540474 TGTAAGTCTTTGTAGAGATTCCACT 57.460 36.000 0.00 0.00 0.00 4.00
1876 1909 8.779354 AATGTAAGTCTTTGTAGAGATTCCAC 57.221 34.615 0.00 0.00 0.00 4.02
1882 1915 9.924650 GTTCCTAAATGTAAGTCTTTGTAGAGA 57.075 33.333 0.00 0.00 0.00 3.10
1883 1916 8.861101 CGTTCCTAAATGTAAGTCTTTGTAGAG 58.139 37.037 0.00 0.00 0.00 2.43
1884 1917 7.816031 CCGTTCCTAAATGTAAGTCTTTGTAGA 59.184 37.037 0.00 0.00 0.00 2.59
1885 1918 7.816031 TCCGTTCCTAAATGTAAGTCTTTGTAG 59.184 37.037 0.00 0.00 0.00 2.74
1886 1919 7.669427 TCCGTTCCTAAATGTAAGTCTTTGTA 58.331 34.615 0.00 0.00 0.00 2.41
1887 1920 6.527423 TCCGTTCCTAAATGTAAGTCTTTGT 58.473 36.000 0.00 0.00 0.00 2.83
1888 1921 6.092259 CCTCCGTTCCTAAATGTAAGTCTTTG 59.908 42.308 0.00 0.00 0.00 2.77
1889 1922 6.171213 CCTCCGTTCCTAAATGTAAGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
1890 1923 5.338137 CCCTCCGTTCCTAAATGTAAGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
1891 1924 4.161754 CCCTCCGTTCCTAAATGTAAGTCT 59.838 45.833 0.00 0.00 0.00 3.24
1892 1925 4.161001 TCCCTCCGTTCCTAAATGTAAGTC 59.839 45.833 0.00 0.00 0.00 3.01
1893 1926 4.098894 TCCCTCCGTTCCTAAATGTAAGT 58.901 43.478 0.00 0.00 0.00 2.24
1894 1927 4.161754 ACTCCCTCCGTTCCTAAATGTAAG 59.838 45.833 0.00 0.00 0.00 2.34
1895 1928 4.098894 ACTCCCTCCGTTCCTAAATGTAA 58.901 43.478 0.00 0.00 0.00 2.41
1896 1929 3.716431 ACTCCCTCCGTTCCTAAATGTA 58.284 45.455 0.00 0.00 0.00 2.29
1897 1930 2.547990 ACTCCCTCCGTTCCTAAATGT 58.452 47.619 0.00 0.00 0.00 2.71
1898 1931 4.344102 TGATACTCCCTCCGTTCCTAAATG 59.656 45.833 0.00 0.00 0.00 2.32
1899 1932 4.553678 TGATACTCCCTCCGTTCCTAAAT 58.446 43.478 0.00 0.00 0.00 1.40
1900 1933 3.985127 TGATACTCCCTCCGTTCCTAAA 58.015 45.455 0.00 0.00 0.00 1.85
1901 1934 3.675348 TGATACTCCCTCCGTTCCTAA 57.325 47.619 0.00 0.00 0.00 2.69
1902 1935 3.897657 ATGATACTCCCTCCGTTCCTA 57.102 47.619 0.00 0.00 0.00 2.94
1903 1936 2.777459 ATGATACTCCCTCCGTTCCT 57.223 50.000 0.00 0.00 0.00 3.36
1904 1937 3.840124 AAATGATACTCCCTCCGTTCC 57.160 47.619 0.00 0.00 0.00 3.62
1905 1938 5.055144 GGTTAAATGATACTCCCTCCGTTC 58.945 45.833 0.00 0.00 0.00 3.95
1906 1939 4.472108 TGGTTAAATGATACTCCCTCCGTT 59.528 41.667 0.00 0.00 0.00 4.44
1907 1940 4.035112 TGGTTAAATGATACTCCCTCCGT 58.965 43.478 0.00 0.00 0.00 4.69
1908 1941 4.682778 TGGTTAAATGATACTCCCTCCG 57.317 45.455 0.00 0.00 0.00 4.63
1909 1942 5.998363 GTGATGGTTAAATGATACTCCCTCC 59.002 44.000 0.00 0.00 0.00 4.30
1910 1943 5.696724 CGTGATGGTTAAATGATACTCCCTC 59.303 44.000 0.00 0.00 0.00 4.30
1911 1944 5.611374 CGTGATGGTTAAATGATACTCCCT 58.389 41.667 0.00 0.00 0.00 4.20
1912 1945 4.213482 GCGTGATGGTTAAATGATACTCCC 59.787 45.833 0.00 0.00 0.00 4.30
1913 1946 5.050091 CAGCGTGATGGTTAAATGATACTCC 60.050 44.000 0.00 0.00 0.00 3.85
1914 1947 5.523916 ACAGCGTGATGGTTAAATGATACTC 59.476 40.000 0.00 0.00 0.00 2.59
1915 1948 5.428253 ACAGCGTGATGGTTAAATGATACT 58.572 37.500 0.00 0.00 0.00 2.12
1916 1949 5.734855 ACAGCGTGATGGTTAAATGATAC 57.265 39.130 0.00 0.00 0.00 2.24
1917 1950 5.877564 TCAACAGCGTGATGGTTAAATGATA 59.122 36.000 0.00 0.00 0.00 2.15
1918 1951 4.699735 TCAACAGCGTGATGGTTAAATGAT 59.300 37.500 0.00 0.00 0.00 2.45
1979 2013 3.168628 CTGAAAGTGGTTTGCGCTG 57.831 52.632 9.73 0.00 0.00 5.18
2284 2385 1.202806 TCTTCAAACCCACAGCCTCAG 60.203 52.381 0.00 0.00 0.00 3.35
2304 2405 9.420118 TGCATATAACTTTGAAGGGAATAATGT 57.580 29.630 0.00 0.00 0.00 2.71
2307 2408 8.815565 TGTGCATATAACTTTGAAGGGAATAA 57.184 30.769 0.00 0.00 0.00 1.40
2321 2422 6.147821 AGCGGTTCTGATATTGTGCATATAAC 59.852 38.462 0.00 0.00 0.00 1.89
2428 2530 9.051679 TGTTATTTTGAACTTCAGAGATCGAAA 57.948 29.630 0.00 2.79 40.33 3.46
2431 2533 6.958193 GCTGTTATTTTGAACTTCAGAGATCG 59.042 38.462 0.00 0.00 0.00 3.69
2511 2613 4.002906 ACGTGCTAAAATCACCTTCAGA 57.997 40.909 0.00 0.00 0.00 3.27
2571 2673 6.490566 ACTTGATCGTTTGGTAAACCATAC 57.509 37.500 11.42 11.42 46.97 2.39
2586 2688 5.163513 CCCAAAAGAATGGAAACTTGATCG 58.836 41.667 0.00 0.00 43.54 3.69
2587 2689 5.482006 CCCCAAAAGAATGGAAACTTGATC 58.518 41.667 0.00 0.00 43.54 2.92
2702 2804 8.391106 GTTTGGCATGAAGTTAGTAGATAAGTG 58.609 37.037 0.00 0.00 0.00 3.16
2727 2829 4.262420 GCAAACATAACAAGAACATGGGGT 60.262 41.667 0.00 0.00 0.00 4.95
2779 2881 5.311265 AGATGAATGAGAAGTTGCTGACAA 58.689 37.500 0.00 0.00 0.00 3.18
2917 3019 4.759693 TGGAAATAAAGTCGTGCAGATTGT 59.240 37.500 0.00 0.00 0.00 2.71
3162 3267 9.613428 CTTCTATGTTATTGATACACCTTCCAA 57.387 33.333 0.00 0.00 0.00 3.53
3192 3297 4.081807 GTGTTGTATCGTCCTCTTAACCCT 60.082 45.833 0.00 0.00 0.00 4.34
3217 3322 2.292267 CAATGCTGCCGAACCTCTATT 58.708 47.619 0.00 0.00 0.00 1.73
3255 3360 2.472816 CATGTGGTTGTTCAGGTTTGC 58.527 47.619 0.00 0.00 0.00 3.68
3259 3364 1.172180 CGGCATGTGGTTGTTCAGGT 61.172 55.000 0.00 0.00 0.00 4.00
3270 3375 1.996786 GATTGAGGCACCGGCATGTG 61.997 60.000 0.00 0.00 43.71 3.21
3429 3548 8.940397 TCAAAAGAAAATTATCCTCACCTTCT 57.060 30.769 0.00 0.00 0.00 2.85
3463 3582 1.852942 CACGACCATTATCCTCACCG 58.147 55.000 0.00 0.00 0.00 4.94
3510 3629 3.359033 ACATCATTGAATGGTGGTCTGG 58.641 45.455 21.25 0.00 45.62 3.86
3521 3640 2.821378 CCACAAGGCTGACATCATTGAA 59.179 45.455 10.36 0.00 0.00 2.69
3632 3751 4.782019 TGTAGCAAACACCCATTTGATC 57.218 40.909 2.50 0.00 41.28 2.92
3645 3764 3.758554 GCCTCCTTGAGAAATGTAGCAAA 59.241 43.478 0.00 0.00 0.00 3.68
3988 4112 1.215244 CGCAGACTGGATGCAGTATG 58.785 55.000 30.68 30.68 44.54 2.39
4059 4183 5.039645 CCCTTGGAGGTCCCATATGTATAT 58.960 45.833 1.24 0.00 46.10 0.86
4514 4640 2.792290 CGGTCGCACTGCAATCTCG 61.792 63.158 1.11 0.00 0.00 4.04
4530 4656 3.551485 GCAATGCTTTTATTAACTGCCGG 59.449 43.478 0.00 0.00 0.00 6.13
4590 4716 7.436673 GTCACCATACTGAATCTTACTGATGAC 59.563 40.741 0.00 0.00 35.21 3.06
4677 4803 0.321122 GAGGCCATAATCCCAGCTCG 60.321 60.000 5.01 0.00 0.00 5.03
4688 4814 1.679944 GCAAGCTCAAGTGAGGCCATA 60.680 52.381 5.01 0.00 42.29 2.74
4764 4926 2.279918 ACCGTCACACGTTGAGCC 60.280 61.111 0.00 0.00 40.58 4.70
4866 5712 3.921677 TGGATTCGAGCGTTTAGTTCTT 58.078 40.909 0.00 0.00 0.00 2.52
4945 5792 2.423538 ACCGGAATTGCTAGTTCATTGC 59.576 45.455 9.46 0.00 0.00 3.56
5003 5850 5.864418 AACTATACCGGAATTGCTACTCA 57.136 39.130 9.46 0.00 0.00 3.41
5075 5930 6.085555 TCCCTATGACGCTTCTTAGTTATG 57.914 41.667 10.88 0.00 30.67 1.90
5118 5974 2.435372 ACATCCGTGCAATATGGGTT 57.565 45.000 8.53 0.00 36.03 4.11
5128 5984 1.498865 CCGGCTATGAACATCCGTGC 61.499 60.000 11.83 4.68 40.23 5.34
5129 5985 1.498865 GCCGGCTATGAACATCCGTG 61.499 60.000 22.15 6.61 40.23 4.94
5132 5988 1.069090 TCGCCGGCTATGAACATCC 59.931 57.895 26.68 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.