Multiple sequence alignment - TraesCS2B01G221100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G221100 chr2B 100.000 4040 0 0 1 4040 211186306 211190345 0.000000e+00 7461.0
1 TraesCS2B01G221100 chr2B 87.614 1978 227 9 1089 3052 210932670 210930697 0.000000e+00 2279.0
2 TraesCS2B01G221100 chr2B 78.697 1305 267 9 1619 2916 132517942 132519242 0.000000e+00 859.0
3 TraesCS2B01G221100 chr2B 75.931 1612 353 27 1090 2679 67081708 67080110 0.000000e+00 795.0
4 TraesCS2B01G221100 chr2B 91.379 58 5 0 996 1053 210932726 210932669 3.350000e-11 80.5
5 TraesCS2B01G221100 chr2A 94.437 2283 117 9 949 3227 147543000 147540724 0.000000e+00 3504.0
6 TraesCS2B01G221100 chr2A 86.343 1955 242 11 1108 3040 148155482 148157433 0.000000e+00 2108.0
7 TraesCS2B01G221100 chr2A 74.912 1706 373 42 1005 2679 43304847 43303166 0.000000e+00 728.0
8 TraesCS2B01G221100 chr2A 90.984 488 25 8 456 925 147543542 147543056 1.220000e-179 640.0
9 TraesCS2B01G221100 chr2A 90.356 477 29 7 3576 4040 147540734 147540263 9.600000e-171 610.0
10 TraesCS2B01G221100 chr2A 78.564 933 155 25 987 1891 43288296 43287381 1.260000e-159 573.0
11 TraesCS2B01G221100 chr2A 93.214 280 11 6 87 362 147543809 147543534 4.860000e-109 405.0
12 TraesCS2B01G221100 chr2A 100.000 35 0 0 654 688 579330099 579330133 9.370000e-07 65.8
13 TraesCS2B01G221100 chr2A 100.000 34 0 0 655 688 20672507 20672474 3.370000e-06 63.9
14 TraesCS2B01G221100 chr2D 86.251 1971 247 15 1089 3039 153003039 153001073 0.000000e+00 2117.0
15 TraesCS2B01G221100 chr2D 76.910 1715 351 33 987 2679 38239004 38237313 0.000000e+00 931.0
16 TraesCS2B01G221100 chr2D 75.878 1708 354 42 1005 2679 38442076 38440394 0.000000e+00 819.0
17 TraesCS2B01G221100 chr2D 76.050 1595 333 33 1108 2679 38218610 38217042 0.000000e+00 784.0
18 TraesCS2B01G221100 chr2D 89.087 504 28 12 457 948 153329100 153329588 5.780000e-168 601.0
19 TraesCS2B01G221100 chr2D 95.330 364 11 4 3 362 153328747 153329108 1.260000e-159 573.0
20 TraesCS2B01G221100 chr2D 75.000 540 107 15 1722 2238 38225796 38225262 1.460000e-54 224.0
21 TraesCS2B01G221100 chr2D 96.939 98 3 0 949 1046 153329628 153329725 8.980000e-37 165.0
22 TraesCS2B01G221100 chr2D 98.571 70 1 0 390 459 327962341 327962410 1.520000e-24 124.0
23 TraesCS2B01G221100 chr4A 78.508 1903 347 42 1096 2967 662202381 662200510 0.000000e+00 1192.0
24 TraesCS2B01G221100 chr1B 97.333 75 0 2 390 463 410793761 410793834 4.240000e-25 126.0
25 TraesCS2B01G221100 chr6A 98.551 69 1 0 390 458 289854708 289854776 5.480000e-24 122.0
26 TraesCS2B01G221100 chr4D 97.222 72 2 0 390 461 417644620 417644691 5.480000e-24 122.0
27 TraesCS2B01G221100 chr3B 98.571 70 0 1 390 458 479903730 479903799 5.480000e-24 122.0
28 TraesCS2B01G221100 chr1A 98.551 69 1 0 390 458 82525948 82525880 5.480000e-24 122.0
29 TraesCS2B01G221100 chr4B 94.805 77 1 3 390 466 291854377 291854450 2.550000e-22 117.0
30 TraesCS2B01G221100 chr5A 89.130 92 8 2 390 481 387897167 387897256 3.300000e-21 113.0
31 TraesCS2B01G221100 chr5D 95.714 70 2 1 390 459 385791182 385791250 1.190000e-20 111.0
32 TraesCS2B01G221100 chr3A 97.222 36 1 0 655 690 703300393 703300358 1.210000e-05 62.1
33 TraesCS2B01G221100 chr7B 96.970 33 1 0 3006 3038 151152289 151152321 5.640000e-04 56.5
34 TraesCS2B01G221100 chr3D 94.444 36 2 0 655 690 570395366 570395331 5.640000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G221100 chr2B 211186306 211190345 4039 False 7461.000000 7461 100.000000 1 4040 1 chr2B.!!$F2 4039
1 TraesCS2B01G221100 chr2B 210930697 210932726 2029 True 1179.750000 2279 89.496500 996 3052 2 chr2B.!!$R2 2056
2 TraesCS2B01G221100 chr2B 132517942 132519242 1300 False 859.000000 859 78.697000 1619 2916 1 chr2B.!!$F1 1297
3 TraesCS2B01G221100 chr2B 67080110 67081708 1598 True 795.000000 795 75.931000 1090 2679 1 chr2B.!!$R1 1589
4 TraesCS2B01G221100 chr2A 148155482 148157433 1951 False 2108.000000 2108 86.343000 1108 3040 1 chr2A.!!$F1 1932
5 TraesCS2B01G221100 chr2A 147540263 147543809 3546 True 1289.750000 3504 92.247750 87 4040 4 chr2A.!!$R4 3953
6 TraesCS2B01G221100 chr2A 43303166 43304847 1681 True 728.000000 728 74.912000 1005 2679 1 chr2A.!!$R3 1674
7 TraesCS2B01G221100 chr2A 43287381 43288296 915 True 573.000000 573 78.564000 987 1891 1 chr2A.!!$R2 904
8 TraesCS2B01G221100 chr2D 153001073 153003039 1966 True 2117.000000 2117 86.251000 1089 3039 1 chr2D.!!$R5 1950
9 TraesCS2B01G221100 chr2D 38237313 38239004 1691 True 931.000000 931 76.910000 987 2679 1 chr2D.!!$R3 1692
10 TraesCS2B01G221100 chr2D 38440394 38442076 1682 True 819.000000 819 75.878000 1005 2679 1 chr2D.!!$R4 1674
11 TraesCS2B01G221100 chr2D 38217042 38218610 1568 True 784.000000 784 76.050000 1108 2679 1 chr2D.!!$R1 1571
12 TraesCS2B01G221100 chr2D 153328747 153329725 978 False 446.333333 601 93.785333 3 1046 3 chr2D.!!$F2 1043
13 TraesCS2B01G221100 chr2D 38225262 38225796 534 True 224.000000 224 75.000000 1722 2238 1 chr2D.!!$R2 516
14 TraesCS2B01G221100 chr4A 662200510 662202381 1871 True 1192.000000 1192 78.508000 1096 2967 1 chr4A.!!$R1 1871

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
422 427 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.0 0.00 0.0 44.78 4.85 F
447 452 0.108329 TTACCACTGCGCTAAGGCTC 60.108 55.0 9.73 0.0 36.09 4.70 F
1209 1286 0.539438 TGACCAATGGCACCCTTCAC 60.539 55.0 0.00 0.0 0.00 3.18 F
1971 2127 0.654683 GCATCGGAGTGTGCATCTTC 59.345 55.0 0.00 0.0 39.26 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2087 2250 1.452145 GCCTCCTACTCCGAGCAGAG 61.452 65.000 0.00 0.80 39.91 3.35 R
2088 2251 1.454111 GCCTCCTACTCCGAGCAGA 60.454 63.158 0.00 0.00 0.00 4.26 R
2521 2699 1.216977 CCGCTCCATGGTCGTACAA 59.783 57.895 21.26 0.00 0.00 2.41 R
3947 4140 0.106708 TCCACTGTGAGCTTGGTCAC 59.893 55.000 21.57 21.57 46.08 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 79 1.857837 GTTTGTGCATGTTGGTTTCCG 59.142 47.619 0.00 0.00 0.00 4.30
209 211 2.623535 TGACACGGTGGTATATGTTGC 58.376 47.619 13.48 0.00 0.00 4.17
289 294 9.528018 CAAACATTGGTTACAGTTTTACATCTT 57.472 29.630 0.00 0.00 35.82 2.40
362 367 5.473066 AATGCCTTTTGTGAAGCAAGTAT 57.527 34.783 0.00 0.00 38.99 2.12
363 368 6.588719 AATGCCTTTTGTGAAGCAAGTATA 57.411 33.333 0.00 0.00 38.99 1.47
364 369 6.588719 ATGCCTTTTGTGAAGCAAGTATAA 57.411 33.333 0.00 0.00 38.99 0.98
365 370 6.398234 TGCCTTTTGTGAAGCAAGTATAAA 57.602 33.333 0.00 0.00 38.47 1.40
366 371 6.446318 TGCCTTTTGTGAAGCAAGTATAAAG 58.554 36.000 0.00 0.00 38.47 1.85
367 372 5.863935 GCCTTTTGTGAAGCAAGTATAAAGG 59.136 40.000 0.00 0.00 40.47 3.11
368 373 6.389906 CCTTTTGTGAAGCAAGTATAAAGGG 58.610 40.000 0.00 0.00 36.85 3.95
369 374 5.385509 TTTGTGAAGCAAGTATAAAGGGC 57.614 39.130 0.00 0.00 38.47 5.19
370 375 4.027674 TGTGAAGCAAGTATAAAGGGCA 57.972 40.909 0.00 0.00 0.00 5.36
371 376 4.009675 TGTGAAGCAAGTATAAAGGGCAG 58.990 43.478 0.00 0.00 0.00 4.85
372 377 3.016736 TGAAGCAAGTATAAAGGGCAGC 58.983 45.455 0.00 0.00 0.00 5.25
373 378 3.282885 GAAGCAAGTATAAAGGGCAGCT 58.717 45.455 0.00 0.00 0.00 4.24
374 379 2.924421 AGCAAGTATAAAGGGCAGCTC 58.076 47.619 0.00 0.00 0.00 4.09
375 380 1.599542 GCAAGTATAAAGGGCAGCTCG 59.400 52.381 0.00 0.00 0.00 5.03
376 381 2.213499 CAAGTATAAAGGGCAGCTCGG 58.787 52.381 0.00 0.00 0.00 4.63
377 382 1.497161 AGTATAAAGGGCAGCTCGGT 58.503 50.000 0.00 0.00 0.00 4.69
378 383 1.139058 AGTATAAAGGGCAGCTCGGTG 59.861 52.381 0.00 0.00 0.00 4.94
379 384 0.179056 TATAAAGGGCAGCTCGGTGC 60.179 55.000 12.31 12.31 43.19 5.01
380 385 2.196997 ATAAAGGGCAGCTCGGTGCA 62.197 55.000 20.84 2.35 45.93 4.57
381 386 2.196997 TAAAGGGCAGCTCGGTGCAT 62.197 55.000 20.84 7.67 45.93 3.96
382 387 4.790962 AGGGCAGCTCGGTGCATG 62.791 66.667 20.84 0.00 45.93 4.06
384 389 2.125147 GGCAGCTCGGTGCATGTA 60.125 61.111 20.84 0.00 45.93 2.29
385 390 2.176273 GGCAGCTCGGTGCATGTAG 61.176 63.158 20.84 0.00 45.93 2.74
386 391 2.817423 GCAGCTCGGTGCATGTAGC 61.817 63.158 15.43 2.56 45.94 3.58
387 392 1.153489 CAGCTCGGTGCATGTAGCT 60.153 57.895 11.25 12.33 45.94 3.32
388 393 1.142748 AGCTCGGTGCATGTAGCTC 59.857 57.895 11.25 0.78 41.35 4.09
389 394 2.233654 GCTCGGTGCATGTAGCTCG 61.234 63.158 11.25 3.46 45.94 5.03
390 395 1.433471 CTCGGTGCATGTAGCTCGA 59.567 57.895 11.25 7.39 45.94 4.04
391 396 0.867753 CTCGGTGCATGTAGCTCGAC 60.868 60.000 11.25 0.00 45.94 4.20
392 397 1.139734 CGGTGCATGTAGCTCGACT 59.860 57.895 11.25 0.00 45.94 4.18
393 398 0.458543 CGGTGCATGTAGCTCGACTT 60.459 55.000 11.25 0.00 45.94 3.01
394 399 1.002366 GGTGCATGTAGCTCGACTTG 58.998 55.000 5.68 0.00 45.94 3.16
395 400 1.404181 GGTGCATGTAGCTCGACTTGA 60.404 52.381 5.68 0.00 45.94 3.02
396 401 2.337583 GTGCATGTAGCTCGACTTGAA 58.662 47.619 6.68 0.00 45.94 2.69
397 402 2.092838 GTGCATGTAGCTCGACTTGAAC 59.907 50.000 6.68 3.04 45.94 3.18
398 403 1.661112 GCATGTAGCTCGACTTGAACC 59.339 52.381 6.68 0.00 41.15 3.62
399 404 2.271800 CATGTAGCTCGACTTGAACCC 58.728 52.381 0.00 0.00 0.00 4.11
400 405 0.242825 TGTAGCTCGACTTGAACCCG 59.757 55.000 0.00 0.00 0.00 5.28
401 406 0.243095 GTAGCTCGACTTGAACCCGT 59.757 55.000 0.00 0.00 0.00 5.28
402 407 0.242825 TAGCTCGACTTGAACCCGTG 59.757 55.000 0.00 0.00 0.00 4.94
403 408 1.006571 GCTCGACTTGAACCCGTGA 60.007 57.895 0.00 0.00 0.00 4.35
404 409 1.282930 GCTCGACTTGAACCCGTGAC 61.283 60.000 0.00 0.00 0.00 3.67
405 410 0.666577 CTCGACTTGAACCCGTGACC 60.667 60.000 0.00 0.00 0.00 4.02
406 411 1.111116 TCGACTTGAACCCGTGACCT 61.111 55.000 0.00 0.00 0.00 3.85
407 412 0.666577 CGACTTGAACCCGTGACCTC 60.667 60.000 0.00 0.00 0.00 3.85
408 413 0.391597 GACTTGAACCCGTGACCTCA 59.608 55.000 0.00 0.00 0.00 3.86
409 414 1.002087 GACTTGAACCCGTGACCTCAT 59.998 52.381 0.00 0.00 0.00 2.90
410 415 1.270839 ACTTGAACCCGTGACCTCATG 60.271 52.381 0.00 0.00 0.00 3.07
421 426 2.154139 ACCTCATGGTCACAAGGCA 58.846 52.632 0.00 0.00 44.78 4.75
422 427 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.00 0.00 44.78 4.85
423 428 1.310933 CCTCATGGTCACAAGGCAGC 61.311 60.000 0.00 0.00 0.00 5.25
424 429 0.607217 CTCATGGTCACAAGGCAGCA 60.607 55.000 0.00 0.00 0.00 4.41
425 430 0.607217 TCATGGTCACAAGGCAGCAG 60.607 55.000 0.00 0.00 0.00 4.24
426 431 1.975407 ATGGTCACAAGGCAGCAGC 60.975 57.895 0.00 0.00 41.10 5.25
427 432 2.282040 GGTCACAAGGCAGCAGCT 60.282 61.111 0.00 0.00 41.70 4.24
428 433 1.900498 GGTCACAAGGCAGCAGCTT 60.900 57.895 0.00 0.00 41.70 3.74
429 434 1.458639 GGTCACAAGGCAGCAGCTTT 61.459 55.000 0.00 0.00 41.17 3.51
430 435 1.238439 GTCACAAGGCAGCAGCTTTA 58.762 50.000 0.00 0.00 38.07 1.85
431 436 1.068954 GTCACAAGGCAGCAGCTTTAC 60.069 52.381 0.00 0.00 38.07 2.01
432 437 0.242017 CACAAGGCAGCAGCTTTACC 59.758 55.000 0.00 0.00 38.07 2.85
433 438 0.178992 ACAAGGCAGCAGCTTTACCA 60.179 50.000 0.00 0.00 38.07 3.25
434 439 0.242017 CAAGGCAGCAGCTTTACCAC 59.758 55.000 0.00 0.00 38.07 4.16
435 440 0.111253 AAGGCAGCAGCTTTACCACT 59.889 50.000 0.00 0.00 38.40 4.00
436 441 0.607489 AGGCAGCAGCTTTACCACTG 60.607 55.000 0.00 0.00 41.70 3.66
440 445 3.972227 CAGCTTTACCACTGCGCT 58.028 55.556 9.73 0.00 0.00 5.92
441 446 3.137484 CAGCTTTACCACTGCGCTA 57.863 52.632 9.73 0.00 0.00 4.26
442 447 1.438651 CAGCTTTACCACTGCGCTAA 58.561 50.000 9.73 0.00 0.00 3.09
443 448 1.394917 CAGCTTTACCACTGCGCTAAG 59.605 52.381 9.73 0.00 0.00 2.18
444 449 0.727398 GCTTTACCACTGCGCTAAGG 59.273 55.000 9.73 10.10 0.00 2.69
445 450 0.727398 CTTTACCACTGCGCTAAGGC 59.273 55.000 9.73 0.00 0.00 4.35
446 451 0.323629 TTTACCACTGCGCTAAGGCT 59.676 50.000 9.73 1.47 36.09 4.58
447 452 0.108329 TTACCACTGCGCTAAGGCTC 60.108 55.000 9.73 0.00 36.09 4.70
448 453 1.956629 TACCACTGCGCTAAGGCTCC 61.957 60.000 9.73 0.00 36.09 4.70
449 454 2.512515 CACTGCGCTAAGGCTCCC 60.513 66.667 9.73 0.00 36.09 4.30
450 455 3.787001 ACTGCGCTAAGGCTCCCC 61.787 66.667 9.73 0.00 36.09 4.81
451 456 3.474570 CTGCGCTAAGGCTCCCCT 61.475 66.667 9.73 0.00 45.77 4.79
459 464 2.766660 AGGCTCCCCTTCCAAAGC 59.233 61.111 0.00 0.00 38.74 3.51
460 465 2.162906 AGGCTCCCCTTCCAAAGCA 61.163 57.895 0.00 0.00 38.74 3.91
461 466 1.228862 GGCTCCCCTTCCAAAGCAA 60.229 57.895 0.00 0.00 36.47 3.91
462 467 1.253593 GGCTCCCCTTCCAAAGCAAG 61.254 60.000 0.00 0.00 36.47 4.01
463 468 0.540597 GCTCCCCTTCCAAAGCAAGT 60.541 55.000 0.00 0.00 34.86 3.16
464 469 1.271926 GCTCCCCTTCCAAAGCAAGTA 60.272 52.381 0.00 0.00 34.86 2.24
465 470 2.817839 GCTCCCCTTCCAAAGCAAGTAA 60.818 50.000 0.00 0.00 34.86 2.24
466 471 3.084786 CTCCCCTTCCAAAGCAAGTAAG 58.915 50.000 0.00 0.00 0.00 2.34
467 472 1.546029 CCCCTTCCAAAGCAAGTAAGC 59.454 52.381 0.00 0.00 0.00 3.09
521 526 7.775053 AAATAAGGGCAAATACAAAGACTCA 57.225 32.000 0.00 0.00 0.00 3.41
536 541 3.081329 GACTCACGTCTTGCCTATACC 57.919 52.381 0.00 0.00 37.19 2.73
545 550 4.693566 CGTCTTGCCTATACCAGTGAAAAA 59.306 41.667 0.00 0.00 0.00 1.94
617 622 5.885230 TGGAGATCACAATTTGTCATGAC 57.115 39.130 19.27 19.27 0.00 3.06
661 666 4.449968 TTTCCTTGGGAAATTTCTAGCCCA 60.450 41.667 17.42 13.83 45.42 5.36
690 702 4.758688 TGCACAGGTTGATGACTAGTATG 58.241 43.478 0.00 0.00 0.00 2.39
710 722 0.865769 GTCGAAATGTGTTGCGAGGT 59.134 50.000 0.00 0.00 45.68 3.85
727 739 4.503910 CGAGGTCACCATTGTAGATTTGA 58.496 43.478 0.00 0.00 0.00 2.69
778 793 7.885922 TGCATTTCATTTCCAGTAGGTAGTTTA 59.114 33.333 0.00 0.00 35.89 2.01
817 832 4.034510 CGAACCACAAGGCTCTCATAATTC 59.965 45.833 0.00 0.00 39.06 2.17
879 895 4.814234 TCGTCAATCTTACACAAAAGCTGT 59.186 37.500 0.00 0.00 39.56 4.40
904 920 8.408601 GTGAATTTGATGTATGCAATTACTCCT 58.591 33.333 0.00 0.00 0.00 3.69
905 921 9.625747 TGAATTTGATGTATGCAATTACTCCTA 57.374 29.630 0.00 0.00 0.00 2.94
908 924 8.621532 TTTGATGTATGCAATTACTCCTATCC 57.378 34.615 0.00 0.00 0.00 2.59
909 925 6.398095 TGATGTATGCAATTACTCCTATCCG 58.602 40.000 0.00 0.00 0.00 4.18
910 926 6.210584 TGATGTATGCAATTACTCCTATCCGA 59.789 38.462 0.00 0.00 0.00 4.55
911 927 6.413783 TGTATGCAATTACTCCTATCCGAA 57.586 37.500 0.00 0.00 0.00 4.30
912 928 7.004555 TGTATGCAATTACTCCTATCCGAAT 57.995 36.000 0.00 0.00 0.00 3.34
913 929 7.450074 TGTATGCAATTACTCCTATCCGAATT 58.550 34.615 0.00 0.00 0.00 2.17
914 930 8.590204 TGTATGCAATTACTCCTATCCGAATTA 58.410 33.333 0.00 0.00 0.00 1.40
1209 1286 0.539438 TGACCAATGGCACCCTTCAC 60.539 55.000 0.00 0.00 0.00 3.18
1419 1511 1.005215 CAGTTCTTGGGCCTCCTCAAT 59.995 52.381 4.53 0.00 0.00 2.57
1512 1613 4.556501 CGTGACATTAACAGCAACCATGTT 60.557 41.667 0.00 0.00 43.15 2.71
1548 1649 8.586879 TCAATAGTCTGATATCCATCGATTCT 57.413 34.615 0.00 0.00 33.51 2.40
1971 2127 0.654683 GCATCGGAGTGTGCATCTTC 59.345 55.000 0.00 0.00 39.26 2.87
2087 2250 1.338020 CAAGGGGTTCAGCAACAAGAC 59.662 52.381 0.00 0.00 33.70 3.01
2088 2251 0.846693 AGGGGTTCAGCAACAAGACT 59.153 50.000 0.00 0.00 33.70 3.24
2998 3180 2.486918 TGATGCCATACGCTTCATCAG 58.513 47.619 0.00 0.00 44.35 2.90
3044 3226 0.335019 TCGGGAGGAAGGTGATGAGA 59.665 55.000 0.00 0.00 0.00 3.27
3112 3294 5.468540 TGGAAGTTCCGATGTATCTATGG 57.531 43.478 17.13 0.00 40.17 2.74
3120 3302 4.694037 TCCGATGTATCTATGGTGTACTCG 59.306 45.833 0.00 0.00 0.00 4.18
3136 3318 8.575589 TGGTGTACTCGTTTTACTAGAAATGTA 58.424 33.333 0.00 0.00 0.00 2.29
3141 3323 8.773404 ACTCGTTTTACTAGAAATGTATGCTT 57.227 30.769 0.00 0.00 0.00 3.91
3147 3329 9.906660 TTTTACTAGAAATGTATGCTTTTGTGG 57.093 29.630 0.00 1.07 0.00 4.17
3210 3392 3.435105 TCAATGTGGTCAAACAAGTGC 57.565 42.857 0.00 0.00 32.81 4.40
3211 3393 3.023119 TCAATGTGGTCAAACAAGTGCT 58.977 40.909 0.00 0.00 32.81 4.40
3212 3394 4.203226 TCAATGTGGTCAAACAAGTGCTA 58.797 39.130 0.00 0.00 32.81 3.49
3214 3396 5.048782 TCAATGTGGTCAAACAAGTGCTATC 60.049 40.000 0.00 0.00 32.81 2.08
3216 3398 3.814842 TGTGGTCAAACAAGTGCTATCTG 59.185 43.478 0.00 0.00 0.00 2.90
3217 3399 3.815401 GTGGTCAAACAAGTGCTATCTGT 59.185 43.478 0.00 0.00 0.00 3.41
3218 3400 4.275936 GTGGTCAAACAAGTGCTATCTGTT 59.724 41.667 0.00 0.00 0.00 3.16
3219 3401 4.887071 TGGTCAAACAAGTGCTATCTGTTT 59.113 37.500 0.00 0.00 33.61 2.83
3220 3402 5.359576 TGGTCAAACAAGTGCTATCTGTTTT 59.640 36.000 0.00 0.00 31.34 2.43
3221 3403 6.127479 TGGTCAAACAAGTGCTATCTGTTTTT 60.127 34.615 0.00 0.00 31.34 1.94
3242 3424 6.935240 TTTTAGGATCATATCTCCATCCGT 57.065 37.500 0.00 0.00 41.06 4.69
3243 3425 6.531503 TTTAGGATCATATCTCCATCCGTC 57.468 41.667 0.00 0.00 41.06 4.79
3244 3426 4.053009 AGGATCATATCTCCATCCGTCA 57.947 45.455 0.00 0.00 41.06 4.35
3245 3427 3.766591 AGGATCATATCTCCATCCGTCAC 59.233 47.826 0.00 0.00 41.06 3.67
3246 3428 3.118956 GGATCATATCTCCATCCGTCACC 60.119 52.174 0.00 0.00 32.72 4.02
3247 3429 2.957474 TCATATCTCCATCCGTCACCA 58.043 47.619 0.00 0.00 0.00 4.17
3248 3430 3.510459 TCATATCTCCATCCGTCACCAT 58.490 45.455 0.00 0.00 0.00 3.55
3249 3431 4.672899 TCATATCTCCATCCGTCACCATA 58.327 43.478 0.00 0.00 0.00 2.74
3250 3432 4.462834 TCATATCTCCATCCGTCACCATAC 59.537 45.833 0.00 0.00 0.00 2.39
3251 3433 2.454336 TCTCCATCCGTCACCATACT 57.546 50.000 0.00 0.00 0.00 2.12
3252 3434 2.307768 TCTCCATCCGTCACCATACTC 58.692 52.381 0.00 0.00 0.00 2.59
3253 3435 1.341531 CTCCATCCGTCACCATACTCC 59.658 57.143 0.00 0.00 0.00 3.85
3254 3436 1.063190 TCCATCCGTCACCATACTCCT 60.063 52.381 0.00 0.00 0.00 3.69
3255 3437 2.176148 TCCATCCGTCACCATACTCCTA 59.824 50.000 0.00 0.00 0.00 2.94
3256 3438 2.296471 CCATCCGTCACCATACTCCTAC 59.704 54.545 0.00 0.00 0.00 3.18
3257 3439 2.062971 TCCGTCACCATACTCCTACC 57.937 55.000 0.00 0.00 0.00 3.18
3258 3440 1.567649 TCCGTCACCATACTCCTACCT 59.432 52.381 0.00 0.00 0.00 3.08
3259 3441 2.024655 TCCGTCACCATACTCCTACCTT 60.025 50.000 0.00 0.00 0.00 3.50
3260 3442 3.202818 TCCGTCACCATACTCCTACCTTA 59.797 47.826 0.00 0.00 0.00 2.69
3261 3443 3.317430 CCGTCACCATACTCCTACCTTAC 59.683 52.174 0.00 0.00 0.00 2.34
3262 3444 3.949754 CGTCACCATACTCCTACCTTACA 59.050 47.826 0.00 0.00 0.00 2.41
3263 3445 4.400251 CGTCACCATACTCCTACCTTACAA 59.600 45.833 0.00 0.00 0.00 2.41
3264 3446 5.068723 CGTCACCATACTCCTACCTTACAAT 59.931 44.000 0.00 0.00 0.00 2.71
3265 3447 6.263842 CGTCACCATACTCCTACCTTACAATA 59.736 42.308 0.00 0.00 0.00 1.90
3266 3448 7.521748 CGTCACCATACTCCTACCTTACAATAG 60.522 44.444 0.00 0.00 0.00 1.73
3267 3449 6.781014 TCACCATACTCCTACCTTACAATAGG 59.219 42.308 0.00 0.00 39.58 2.57
3268 3450 6.781014 CACCATACTCCTACCTTACAATAGGA 59.219 42.308 0.00 0.32 43.86 2.94
3269 3451 7.289317 CACCATACTCCTACCTTACAATAGGAA 59.711 40.741 1.88 0.00 45.05 3.36
3270 3452 7.847848 ACCATACTCCTACCTTACAATAGGAAA 59.152 37.037 1.88 0.00 45.05 3.13
3271 3453 8.881262 CCATACTCCTACCTTACAATAGGAAAT 58.119 37.037 1.88 0.00 45.05 2.17
3272 3454 9.930693 CATACTCCTACCTTACAATAGGAAATC 57.069 37.037 1.88 0.00 45.05 2.17
3273 3455 7.989947 ACTCCTACCTTACAATAGGAAATCA 57.010 36.000 1.88 0.00 45.05 2.57
3274 3456 8.388656 ACTCCTACCTTACAATAGGAAATCAA 57.611 34.615 1.88 0.00 45.05 2.57
3275 3457 8.832735 ACTCCTACCTTACAATAGGAAATCAAA 58.167 33.333 1.88 0.00 45.05 2.69
3276 3458 9.853177 CTCCTACCTTACAATAGGAAATCAAAT 57.147 33.333 1.88 0.00 45.05 2.32
3277 3459 9.627123 TCCTACCTTACAATAGGAAATCAAATG 57.373 33.333 0.00 0.00 43.26 2.32
3278 3460 9.627123 CCTACCTTACAATAGGAAATCAAATGA 57.373 33.333 0.00 0.00 40.53 2.57
3298 3480 9.162793 CAAATGAATGATAAAATCAGTACTCGC 57.837 33.333 0.00 0.00 43.53 5.03
3299 3481 8.437360 AATGAATGATAAAATCAGTACTCGCA 57.563 30.769 0.00 0.00 43.53 5.10
3300 3482 7.468922 TGAATGATAAAATCAGTACTCGCAG 57.531 36.000 0.00 0.00 43.53 5.18
3301 3483 7.264947 TGAATGATAAAATCAGTACTCGCAGA 58.735 34.615 0.00 0.00 43.53 4.26
3302 3484 7.763985 TGAATGATAAAATCAGTACTCGCAGAA 59.236 33.333 0.00 0.00 43.53 3.02
3303 3485 7.706281 ATGATAAAATCAGTACTCGCAGAAG 57.294 36.000 0.00 0.00 43.53 2.85
3304 3486 6.631016 TGATAAAATCAGTACTCGCAGAAGT 58.369 36.000 0.00 0.00 31.62 3.01
3305 3487 7.097192 TGATAAAATCAGTACTCGCAGAAGTT 58.903 34.615 0.00 0.00 31.62 2.66
3306 3488 5.847670 AAAATCAGTACTCGCAGAAGTTC 57.152 39.130 0.00 0.00 34.09 3.01
3307 3489 4.792521 AATCAGTACTCGCAGAAGTTCT 57.207 40.909 0.00 0.00 34.09 3.01
3308 3490 5.899120 AATCAGTACTCGCAGAAGTTCTA 57.101 39.130 4.74 0.00 34.09 2.10
3309 3491 5.899120 ATCAGTACTCGCAGAAGTTCTAA 57.101 39.130 4.74 0.00 34.09 2.10
3310 3492 5.700722 TCAGTACTCGCAGAAGTTCTAAA 57.299 39.130 4.74 0.00 34.09 1.85
3311 3493 6.268825 TCAGTACTCGCAGAAGTTCTAAAT 57.731 37.500 4.74 0.00 34.09 1.40
3312 3494 7.387119 TCAGTACTCGCAGAAGTTCTAAATA 57.613 36.000 4.74 0.00 34.09 1.40
3313 3495 7.249147 TCAGTACTCGCAGAAGTTCTAAATAC 58.751 38.462 4.74 4.78 34.09 1.89
3314 3496 7.027760 CAGTACTCGCAGAAGTTCTAAATACA 58.972 38.462 4.74 0.00 34.09 2.29
3315 3497 7.008447 CAGTACTCGCAGAAGTTCTAAATACAC 59.992 40.741 4.74 0.90 34.09 2.90
3316 3498 4.857588 ACTCGCAGAAGTTCTAAATACACG 59.142 41.667 4.74 1.92 34.09 4.49
3317 3499 5.050644 TCGCAGAAGTTCTAAATACACGA 57.949 39.130 4.74 4.13 0.00 4.35
3318 3500 5.647589 TCGCAGAAGTTCTAAATACACGAT 58.352 37.500 4.74 0.00 0.00 3.73
3319 3501 6.097356 TCGCAGAAGTTCTAAATACACGATT 58.903 36.000 4.74 0.00 0.00 3.34
3320 3502 7.252708 TCGCAGAAGTTCTAAATACACGATTA 58.747 34.615 4.74 0.00 0.00 1.75
3321 3503 7.219535 TCGCAGAAGTTCTAAATACACGATTAC 59.780 37.037 4.74 0.00 0.00 1.89
3322 3504 7.220300 CGCAGAAGTTCTAAATACACGATTACT 59.780 37.037 4.74 0.00 0.00 2.24
3323 3505 8.870879 GCAGAAGTTCTAAATACACGATTACTT 58.129 33.333 4.74 0.00 29.19 2.24
3337 3519 8.348983 ACACGATTACTTCTACATATTTTCCG 57.651 34.615 0.00 0.00 0.00 4.30
3338 3520 7.977853 ACACGATTACTTCTACATATTTTCCGT 59.022 33.333 0.00 0.00 0.00 4.69
3339 3521 8.477709 CACGATTACTTCTACATATTTTCCGTC 58.522 37.037 0.00 0.00 0.00 4.79
3340 3522 8.192774 ACGATTACTTCTACATATTTTCCGTCA 58.807 33.333 0.00 0.00 0.00 4.35
3341 3523 9.027129 CGATTACTTCTACATATTTTCCGTCAA 57.973 33.333 0.00 0.00 0.00 3.18
3345 3527 8.385898 ACTTCTACATATTTTCCGTCAAAACA 57.614 30.769 0.00 0.00 36.78 2.83
3346 3528 8.842280 ACTTCTACATATTTTCCGTCAAAACAA 58.158 29.630 0.00 0.00 36.78 2.83
3347 3529 9.840427 CTTCTACATATTTTCCGTCAAAACAAT 57.160 29.630 0.00 0.00 36.78 2.71
3357 3539 9.587772 TTTTCCGTCAAAACAATAAGAAATTGA 57.412 25.926 4.82 0.00 33.51 2.57
3358 3540 9.757227 TTTCCGTCAAAACAATAAGAAATTGAT 57.243 25.926 4.82 0.00 33.51 2.57
3359 3541 9.757227 TTCCGTCAAAACAATAAGAAATTGATT 57.243 25.926 4.82 0.00 33.51 2.57
3360 3542 9.190858 TCCGTCAAAACAATAAGAAATTGATTG 57.809 29.630 4.82 8.85 36.77 2.67
3361 3543 8.977505 CCGTCAAAACAATAAGAAATTGATTGT 58.022 29.630 4.82 0.00 43.81 2.71
3384 3566 4.717233 TTTTTCTTGCTTGCAGTCTTCA 57.283 36.364 0.00 0.00 0.00 3.02
3385 3567 4.924305 TTTTCTTGCTTGCAGTCTTCAT 57.076 36.364 0.00 0.00 0.00 2.57
3386 3568 4.494350 TTTCTTGCTTGCAGTCTTCATC 57.506 40.909 0.00 0.00 0.00 2.92
3387 3569 3.413846 TCTTGCTTGCAGTCTTCATCT 57.586 42.857 0.00 0.00 0.00 2.90
3388 3570 3.332919 TCTTGCTTGCAGTCTTCATCTC 58.667 45.455 0.00 0.00 0.00 2.75
3389 3571 2.845363 TGCTTGCAGTCTTCATCTCA 57.155 45.000 0.00 0.00 0.00 3.27
3390 3572 3.130280 TGCTTGCAGTCTTCATCTCAA 57.870 42.857 0.00 0.00 0.00 3.02
3391 3573 3.072211 TGCTTGCAGTCTTCATCTCAAG 58.928 45.455 0.00 0.00 35.37 3.02
3392 3574 2.159544 GCTTGCAGTCTTCATCTCAAGC 60.160 50.000 8.67 8.67 45.92 4.01
3393 3575 2.845363 TGCAGTCTTCATCTCAAGCA 57.155 45.000 0.00 0.00 0.00 3.91
3394 3576 2.420642 TGCAGTCTTCATCTCAAGCAC 58.579 47.619 0.00 0.00 0.00 4.40
3395 3577 2.224354 TGCAGTCTTCATCTCAAGCACA 60.224 45.455 0.00 0.00 0.00 4.57
3396 3578 2.810274 GCAGTCTTCATCTCAAGCACAA 59.190 45.455 0.00 0.00 0.00 3.33
3397 3579 3.364764 GCAGTCTTCATCTCAAGCACAAC 60.365 47.826 0.00 0.00 0.00 3.32
3398 3580 3.188048 CAGTCTTCATCTCAAGCACAACC 59.812 47.826 0.00 0.00 0.00 3.77
3399 3581 3.141398 GTCTTCATCTCAAGCACAACCA 58.859 45.455 0.00 0.00 0.00 3.67
3400 3582 3.188048 GTCTTCATCTCAAGCACAACCAG 59.812 47.826 0.00 0.00 0.00 4.00
3401 3583 2.936919 TCATCTCAAGCACAACCAGT 57.063 45.000 0.00 0.00 0.00 4.00
3418 3600 7.772332 CAACCAGTGTTGTCCTAATAGATAC 57.228 40.000 0.00 0.00 45.51 2.24
3419 3601 7.556844 CAACCAGTGTTGTCCTAATAGATACT 58.443 38.462 0.00 0.00 45.51 2.12
3420 3602 7.113658 ACCAGTGTTGTCCTAATAGATACTG 57.886 40.000 0.00 0.00 34.40 2.74
3421 3603 5.986135 CCAGTGTTGTCCTAATAGATACTGC 59.014 44.000 0.00 0.00 33.55 4.40
3422 3604 6.183360 CCAGTGTTGTCCTAATAGATACTGCT 60.183 42.308 0.00 0.00 33.55 4.24
3423 3605 6.699204 CAGTGTTGTCCTAATAGATACTGCTG 59.301 42.308 0.00 0.00 0.00 4.41
3424 3606 6.607600 AGTGTTGTCCTAATAGATACTGCTGA 59.392 38.462 0.00 0.00 0.00 4.26
3425 3607 6.697892 GTGTTGTCCTAATAGATACTGCTGAC 59.302 42.308 0.00 0.00 0.00 3.51
3426 3608 6.379988 TGTTGTCCTAATAGATACTGCTGACA 59.620 38.462 0.00 0.00 0.00 3.58
3427 3609 7.093509 TGTTGTCCTAATAGATACTGCTGACAA 60.094 37.037 0.00 0.00 37.73 3.18
3428 3610 7.418337 TGTCCTAATAGATACTGCTGACAAA 57.582 36.000 0.00 0.00 0.00 2.83
3429 3611 7.492524 TGTCCTAATAGATACTGCTGACAAAG 58.507 38.462 0.00 0.00 0.00 2.77
3430 3612 7.124298 TGTCCTAATAGATACTGCTGACAAAGT 59.876 37.037 0.00 0.00 0.00 2.66
3431 3613 8.630917 GTCCTAATAGATACTGCTGACAAAGTA 58.369 37.037 0.00 1.28 33.59 2.24
3432 3614 8.851145 TCCTAATAGATACTGCTGACAAAGTAG 58.149 37.037 0.00 0.00 43.78 2.57
3433 3615 7.596995 CCTAATAGATACTGCTGACAAAGTAGC 59.403 40.741 0.00 5.49 42.04 3.58
3434 3616 4.808414 AGATACTGCTGACAAAGTAGCA 57.192 40.909 13.00 0.00 46.79 3.49
3442 3624 6.633500 TGCTGACAAAGTAGCATAGTTTTT 57.367 33.333 0.00 0.00 41.19 1.94
3492 3674 9.988815 ATTCATCATGTGTATAGGACTACTTTC 57.011 33.333 0.00 0.00 0.00 2.62
3493 3675 8.533569 TCATCATGTGTATAGGACTACTTTCA 57.466 34.615 0.00 0.00 0.00 2.69
3494 3676 9.147732 TCATCATGTGTATAGGACTACTTTCAT 57.852 33.333 0.00 0.00 0.00 2.57
3495 3677 9.201127 CATCATGTGTATAGGACTACTTTCATG 57.799 37.037 0.00 0.00 33.19 3.07
3496 3678 8.306313 TCATGTGTATAGGACTACTTTCATGT 57.694 34.615 0.00 0.00 33.39 3.21
3497 3679 9.416284 TCATGTGTATAGGACTACTTTCATGTA 57.584 33.333 0.00 0.00 33.39 2.29
3500 3682 8.186163 TGTGTATAGGACTACTTTCATGTAACG 58.814 37.037 0.00 0.00 0.00 3.18
3501 3683 8.186821 GTGTATAGGACTACTTTCATGTAACGT 58.813 37.037 0.00 0.00 0.00 3.99
3502 3684 8.742777 TGTATAGGACTACTTTCATGTAACGTT 58.257 33.333 5.88 5.88 0.00 3.99
3505 3687 7.458409 AGGACTACTTTCATGTAACGTTAGA 57.542 36.000 8.60 8.12 0.00 2.10
3506 3688 8.064336 AGGACTACTTTCATGTAACGTTAGAT 57.936 34.615 11.89 11.89 0.00 1.98
3507 3689 8.189460 AGGACTACTTTCATGTAACGTTAGATC 58.811 37.037 14.53 1.42 0.00 2.75
3508 3690 8.189460 GGACTACTTTCATGTAACGTTAGATCT 58.811 37.037 14.53 0.00 0.00 2.75
3509 3691 8.912787 ACTACTTTCATGTAACGTTAGATCTG 57.087 34.615 14.53 7.27 0.00 2.90
3510 3692 8.737175 ACTACTTTCATGTAACGTTAGATCTGA 58.263 33.333 14.53 9.42 0.00 3.27
3511 3693 9.569167 CTACTTTCATGTAACGTTAGATCTGAA 57.431 33.333 14.53 14.34 0.00 3.02
3512 3694 8.827177 ACTTTCATGTAACGTTAGATCTGAAA 57.173 30.769 22.52 22.52 0.00 2.69
3513 3695 8.709646 ACTTTCATGTAACGTTAGATCTGAAAC 58.290 33.333 21.18 1.61 0.00 2.78
3514 3696 8.596271 TTTCATGTAACGTTAGATCTGAAACA 57.404 30.769 21.18 11.84 0.00 2.83
3515 3697 8.596271 TTCATGTAACGTTAGATCTGAAACAA 57.404 30.769 14.53 0.00 0.00 2.83
3516 3698 8.596271 TCATGTAACGTTAGATCTGAAACAAA 57.404 30.769 14.53 0.00 0.00 2.83
3517 3699 9.047371 TCATGTAACGTTAGATCTGAAACAAAA 57.953 29.630 14.53 0.00 0.00 2.44
3518 3700 9.825972 CATGTAACGTTAGATCTGAAACAAAAT 57.174 29.630 14.53 0.00 0.00 1.82
3519 3701 9.825972 ATGTAACGTTAGATCTGAAACAAAATG 57.174 29.630 11.89 0.00 0.00 2.32
3520 3702 7.801315 TGTAACGTTAGATCTGAAACAAAATGC 59.199 33.333 8.60 0.00 0.00 3.56
3521 3703 6.560253 ACGTTAGATCTGAAACAAAATGCT 57.440 33.333 5.18 0.00 0.00 3.79
3522 3704 6.373779 ACGTTAGATCTGAAACAAAATGCTG 58.626 36.000 5.18 0.00 0.00 4.41
3523 3705 6.017109 ACGTTAGATCTGAAACAAAATGCTGT 60.017 34.615 5.18 0.00 0.00 4.40
3524 3706 6.303970 CGTTAGATCTGAAACAAAATGCTGTG 59.696 38.462 5.18 0.00 0.00 3.66
3525 3707 5.130292 AGATCTGAAACAAAATGCTGTGG 57.870 39.130 0.00 0.00 0.00 4.17
3526 3708 4.828939 AGATCTGAAACAAAATGCTGTGGA 59.171 37.500 0.00 0.00 0.00 4.02
3527 3709 4.572985 TCTGAAACAAAATGCTGTGGAG 57.427 40.909 0.00 0.00 0.00 3.86
3528 3710 4.206375 TCTGAAACAAAATGCTGTGGAGA 58.794 39.130 0.00 0.00 0.00 3.71
3529 3711 4.828939 TCTGAAACAAAATGCTGTGGAGAT 59.171 37.500 0.00 0.00 0.00 2.75
3530 3712 5.048504 TCTGAAACAAAATGCTGTGGAGATC 60.049 40.000 0.00 0.00 0.00 2.75
3531 3713 4.583907 TGAAACAAAATGCTGTGGAGATCA 59.416 37.500 0.00 0.00 0.00 2.92
3532 3714 5.244402 TGAAACAAAATGCTGTGGAGATCAT 59.756 36.000 0.00 0.00 0.00 2.45
3533 3715 4.978083 ACAAAATGCTGTGGAGATCATC 57.022 40.909 0.00 0.00 0.00 2.92
3542 3724 2.234586 GGAGATCATCCCTTGGCCA 58.765 57.895 0.00 0.00 43.01 5.36
3543 3725 0.110104 GGAGATCATCCCTTGGCCAG 59.890 60.000 5.11 0.00 43.01 4.85
3544 3726 0.110104 GAGATCATCCCTTGGCCAGG 59.890 60.000 8.15 8.15 43.49 4.45
3553 3735 2.791170 CTTGGCCAGGAGAATCTGC 58.209 57.895 9.80 0.00 33.64 4.26
3554 3736 0.750911 CTTGGCCAGGAGAATCTGCC 60.751 60.000 9.80 0.00 42.03 4.85
3555 3737 1.499913 TTGGCCAGGAGAATCTGCCA 61.500 55.000 5.11 7.81 46.66 4.92
3556 3738 1.452833 GGCCAGGAGAATCTGCCAC 60.453 63.158 0.00 0.00 41.56 5.01
3557 3739 1.606531 GCCAGGAGAATCTGCCACT 59.393 57.895 0.00 0.00 33.64 4.00
3558 3740 0.747283 GCCAGGAGAATCTGCCACTG 60.747 60.000 0.00 0.00 33.64 3.66
3559 3741 0.617413 CCAGGAGAATCTGCCACTGT 59.383 55.000 0.00 0.00 33.64 3.55
3560 3742 1.004044 CCAGGAGAATCTGCCACTGTT 59.996 52.381 0.00 0.00 33.64 3.16
3561 3743 2.237143 CCAGGAGAATCTGCCACTGTTA 59.763 50.000 0.00 0.00 33.64 2.41
3562 3744 3.529533 CAGGAGAATCTGCCACTGTTAG 58.470 50.000 0.00 0.00 33.73 2.34
3563 3745 3.196469 CAGGAGAATCTGCCACTGTTAGA 59.804 47.826 0.00 0.00 33.73 2.10
3564 3746 3.450457 AGGAGAATCTGCCACTGTTAGAG 59.550 47.826 0.00 0.00 33.73 2.43
3565 3747 3.196685 GGAGAATCTGCCACTGTTAGAGT 59.803 47.826 0.00 0.00 31.70 3.24
3566 3748 4.323104 GGAGAATCTGCCACTGTTAGAGTT 60.323 45.833 0.00 0.00 29.55 3.01
3567 3749 5.234466 AGAATCTGCCACTGTTAGAGTTT 57.766 39.130 0.00 0.00 29.75 2.66
3568 3750 5.241662 AGAATCTGCCACTGTTAGAGTTTC 58.758 41.667 0.00 0.00 29.75 2.78
3569 3751 4.899352 ATCTGCCACTGTTAGAGTTTCT 57.101 40.909 0.00 0.00 29.75 2.52
3570 3752 3.995199 TCTGCCACTGTTAGAGTTTCTG 58.005 45.455 0.00 0.00 29.75 3.02
3571 3753 3.641436 TCTGCCACTGTTAGAGTTTCTGA 59.359 43.478 0.00 0.00 29.75 3.27
3572 3754 3.993081 CTGCCACTGTTAGAGTTTCTGAG 59.007 47.826 0.00 0.00 29.75 3.35
3573 3755 3.388024 TGCCACTGTTAGAGTTTCTGAGT 59.612 43.478 0.00 0.00 29.75 3.41
3574 3756 3.743396 GCCACTGTTAGAGTTTCTGAGTG 59.257 47.826 0.00 0.00 33.23 3.51
3585 3767 5.297029 AGAGTTTCTGAGTGTTTGTTTAGGC 59.703 40.000 0.00 0.00 0.00 3.93
3609 3791 5.413309 ACTTGTTTTGGTTGATGGTTTGA 57.587 34.783 0.00 0.00 0.00 2.69
3611 3793 5.641636 ACTTGTTTTGGTTGATGGTTTGAAC 59.358 36.000 0.00 0.00 0.00 3.18
3616 3798 5.413309 TTGGTTGATGGTTTGAACTTTGT 57.587 34.783 0.00 0.00 0.00 2.83
3636 3818 1.948834 TGGTGATCTTGTGCAAGTGTG 59.051 47.619 11.17 0.00 39.38 3.82
3653 3835 2.253758 TGACGCTGGTTTGAGCTGC 61.254 57.895 0.00 0.00 36.77 5.25
3676 3858 1.001378 GCGTGCAGTTGGTTCAGAAAT 60.001 47.619 0.00 0.00 0.00 2.17
3724 3906 4.473477 AGTTTTCTTCCTCCTATCCGTG 57.527 45.455 0.00 0.00 0.00 4.94
3747 3929 4.867086 AGGGTTTCCTTTTGAGTTTCTGA 58.133 39.130 0.00 0.00 41.56 3.27
3758 3940 3.405831 TGAGTTTCTGATGCTCTTGGTG 58.594 45.455 9.38 0.00 0.00 4.17
3772 3954 1.002900 CTTGGTGTGTAAACTGTGGCG 60.003 52.381 0.00 0.00 0.00 5.69
3782 3964 3.982576 AAACTGTGGCGGTTTCTTTAG 57.017 42.857 0.69 0.00 38.39 1.85
3807 3989 0.331278 ATCCATGGCCTTTTCGTCCA 59.669 50.000 6.96 0.00 0.00 4.02
3808 3990 0.322456 TCCATGGCCTTTTCGTCCAG 60.322 55.000 6.96 0.00 32.78 3.86
3857 4040 7.272037 TGAACCAAGAAAATAGTCAGTTTCC 57.728 36.000 0.00 0.00 39.08 3.13
3867 4050 2.547990 AGTCAGTTTCCGTCCCCTAAT 58.452 47.619 0.00 0.00 0.00 1.73
3878 4061 2.613474 CGTCCCCTAATTTTGTCACCGA 60.613 50.000 0.00 0.00 0.00 4.69
3883 4066 2.618045 CCTAATTTTGTCACCGAGCCCT 60.618 50.000 0.00 0.00 0.00 5.19
3884 4067 1.534729 AATTTTGTCACCGAGCCCTC 58.465 50.000 0.00 0.00 0.00 4.30
3885 4068 0.322546 ATTTTGTCACCGAGCCCTCC 60.323 55.000 0.00 0.00 0.00 4.30
3886 4069 1.701031 TTTTGTCACCGAGCCCTCCA 61.701 55.000 0.00 0.00 0.00 3.86
3887 4070 1.701031 TTTGTCACCGAGCCCTCCAA 61.701 55.000 0.00 0.00 0.00 3.53
3888 4071 1.488705 TTGTCACCGAGCCCTCCAAT 61.489 55.000 0.00 0.00 0.00 3.16
3890 4073 0.759346 GTCACCGAGCCCTCCAATAT 59.241 55.000 0.00 0.00 0.00 1.28
3891 4074 0.758734 TCACCGAGCCCTCCAATATG 59.241 55.000 0.00 0.00 0.00 1.78
3902 4095 5.595952 AGCCCTCCAATATGAAAACAAGATC 59.404 40.000 0.00 0.00 0.00 2.75
3909 4102 6.460676 CCAATATGAAAACAAGATCTCTGGGC 60.461 42.308 0.00 0.00 0.00 5.36
3914 4107 4.591321 AAACAAGATCTCTGGGCCATAA 57.409 40.909 6.72 0.00 0.00 1.90
3936 4129 3.380004 AGACGTTGATGGTTTTGCTGAAA 59.620 39.130 0.00 0.00 0.00 2.69
3937 4130 4.037923 AGACGTTGATGGTTTTGCTGAAAT 59.962 37.500 0.00 0.00 0.00 2.17
3938 4131 4.298332 ACGTTGATGGTTTTGCTGAAATC 58.702 39.130 0.00 0.00 0.00 2.17
3947 4140 4.427312 GTTTTGCTGAAATCATAGGGCTG 58.573 43.478 0.00 0.00 0.00 4.85
3961 4154 1.227943 GGCTGTGACCAAGCTCACA 60.228 57.895 6.38 6.38 46.69 3.58
3979 4172 0.950836 CAGTGGACGAATTGGTGCAA 59.049 50.000 15.94 0.00 40.03 4.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 8.608844 TTGTGTTTGTTTGGTTAACATTCTTT 57.391 26.923 8.10 0.00 45.72 2.52
14 15 8.877779 TGTCTTATCCATTTTTGTGTTTGTTTG 58.122 29.630 0.00 0.00 0.00 2.93
19 20 9.612066 ATTGTTGTCTTATCCATTTTTGTGTTT 57.388 25.926 0.00 0.00 0.00 2.83
48 49 2.358898 ACATGCACAAACCTGTCTTCAC 59.641 45.455 0.00 0.00 31.64 3.18
289 294 7.771361 TGGAGTACAAACAACTGAATTCTGTAA 59.229 33.333 17.16 0.00 0.00 2.41
362 367 2.046314 GCACCGAGCTGCCCTTTA 60.046 61.111 0.00 0.00 41.15 1.85
363 368 3.574074 ATGCACCGAGCTGCCCTTT 62.574 57.895 0.00 0.00 45.94 3.11
364 369 4.039092 ATGCACCGAGCTGCCCTT 62.039 61.111 0.00 0.00 45.94 3.95
365 370 4.790962 CATGCACCGAGCTGCCCT 62.791 66.667 0.00 0.00 45.94 5.19
366 371 3.680620 TACATGCACCGAGCTGCCC 62.681 63.158 0.00 0.00 45.94 5.36
367 372 2.125147 TACATGCACCGAGCTGCC 60.125 61.111 0.00 0.00 45.94 4.85
368 373 2.817423 GCTACATGCACCGAGCTGC 61.817 63.158 0.00 0.00 45.94 5.25
369 374 1.150567 GAGCTACATGCACCGAGCTG 61.151 60.000 19.62 2.11 45.15 4.24
370 375 3.303189 AGCTACATGCACCGAGCT 58.697 55.556 11.31 11.31 45.94 4.09
371 376 2.233654 CGAGCTACATGCACCGAGC 61.234 63.158 7.33 7.33 45.94 5.03
372 377 0.867753 GTCGAGCTACATGCACCGAG 60.868 60.000 0.00 0.00 44.68 4.63
373 378 1.138883 GTCGAGCTACATGCACCGA 59.861 57.895 0.00 0.00 45.94 4.69
374 379 0.458543 AAGTCGAGCTACATGCACCG 60.459 55.000 0.00 0.00 45.94 4.94
375 380 1.002366 CAAGTCGAGCTACATGCACC 58.998 55.000 0.00 0.00 45.94 5.01
376 381 1.996292 TCAAGTCGAGCTACATGCAC 58.004 50.000 0.00 0.00 45.94 4.57
377 382 2.337583 GTTCAAGTCGAGCTACATGCA 58.662 47.619 0.00 0.00 45.94 3.96
378 383 1.661112 GGTTCAAGTCGAGCTACATGC 59.339 52.381 0.00 0.00 43.29 4.06
379 384 2.271800 GGGTTCAAGTCGAGCTACATG 58.728 52.381 0.00 0.00 0.00 3.21
380 385 1.135083 CGGGTTCAAGTCGAGCTACAT 60.135 52.381 0.00 0.00 0.00 2.29
381 386 0.242825 CGGGTTCAAGTCGAGCTACA 59.757 55.000 0.00 0.00 0.00 2.74
382 387 0.243095 ACGGGTTCAAGTCGAGCTAC 59.757 55.000 0.00 0.00 0.00 3.58
383 388 0.242825 CACGGGTTCAAGTCGAGCTA 59.757 55.000 0.00 0.00 0.00 3.32
384 389 1.006102 CACGGGTTCAAGTCGAGCT 60.006 57.895 0.00 0.00 0.00 4.09
385 390 1.006571 TCACGGGTTCAAGTCGAGC 60.007 57.895 0.00 0.00 0.00 5.03
386 391 0.666577 GGTCACGGGTTCAAGTCGAG 60.667 60.000 0.00 0.00 0.00 4.04
387 392 1.111116 AGGTCACGGGTTCAAGTCGA 61.111 55.000 0.00 0.00 0.00 4.20
388 393 0.666577 GAGGTCACGGGTTCAAGTCG 60.667 60.000 0.00 0.00 0.00 4.18
389 394 0.391597 TGAGGTCACGGGTTCAAGTC 59.608 55.000 0.00 0.00 0.00 3.01
390 395 1.056660 ATGAGGTCACGGGTTCAAGT 58.943 50.000 0.00 0.00 0.00 3.16
391 396 1.442769 CATGAGGTCACGGGTTCAAG 58.557 55.000 0.00 0.00 0.00 3.02
392 397 0.036164 CCATGAGGTCACGGGTTCAA 59.964 55.000 0.00 0.00 0.00 2.69
393 398 1.676968 CCATGAGGTCACGGGTTCA 59.323 57.895 0.00 0.00 0.00 3.18
394 399 4.617875 CCATGAGGTCACGGGTTC 57.382 61.111 0.00 0.00 0.00 3.62
404 409 1.310933 GCTGCCTTGTGACCATGAGG 61.311 60.000 0.00 0.00 42.21 3.86
405 410 0.607217 TGCTGCCTTGTGACCATGAG 60.607 55.000 0.00 0.00 0.00 2.90
406 411 0.607217 CTGCTGCCTTGTGACCATGA 60.607 55.000 0.00 0.00 0.00 3.07
407 412 1.880894 CTGCTGCCTTGTGACCATG 59.119 57.895 0.00 0.00 0.00 3.66
408 413 1.975407 GCTGCTGCCTTGTGACCAT 60.975 57.895 3.85 0.00 0.00 3.55
409 414 2.595463 GCTGCTGCCTTGTGACCA 60.595 61.111 3.85 0.00 0.00 4.02
410 415 1.458639 AAAGCTGCTGCCTTGTGACC 61.459 55.000 12.44 0.00 40.80 4.02
411 416 1.068954 GTAAAGCTGCTGCCTTGTGAC 60.069 52.381 12.44 0.00 40.80 3.67
412 417 1.238439 GTAAAGCTGCTGCCTTGTGA 58.762 50.000 12.44 0.00 40.80 3.58
413 418 0.242017 GGTAAAGCTGCTGCCTTGTG 59.758 55.000 12.44 0.00 40.80 3.33
414 419 0.178992 TGGTAAAGCTGCTGCCTTGT 60.179 50.000 12.44 0.00 40.80 3.16
415 420 0.242017 GTGGTAAAGCTGCTGCCTTG 59.758 55.000 12.44 0.00 40.80 3.61
416 421 0.111253 AGTGGTAAAGCTGCTGCCTT 59.889 50.000 12.44 8.34 40.80 4.35
417 422 0.607489 CAGTGGTAAAGCTGCTGCCT 60.607 55.000 12.44 2.45 40.80 4.75
418 423 1.878775 CAGTGGTAAAGCTGCTGCC 59.121 57.895 12.44 7.07 40.80 4.85
423 428 1.394917 CTTAGCGCAGTGGTAAAGCTG 59.605 52.381 11.47 0.00 39.86 4.24
424 429 1.676014 CCTTAGCGCAGTGGTAAAGCT 60.676 52.381 11.47 0.00 39.86 3.74
425 430 0.727398 CCTTAGCGCAGTGGTAAAGC 59.273 55.000 11.47 0.00 39.86 3.51
426 431 0.727398 GCCTTAGCGCAGTGGTAAAG 59.273 55.000 11.47 2.53 39.86 1.85
427 432 0.323629 AGCCTTAGCGCAGTGGTAAA 59.676 50.000 11.47 0.00 46.67 2.01
428 433 0.108329 GAGCCTTAGCGCAGTGGTAA 60.108 55.000 11.47 5.53 46.67 2.85
429 434 1.515954 GAGCCTTAGCGCAGTGGTA 59.484 57.895 11.47 0.00 46.67 3.25
430 435 2.266055 GAGCCTTAGCGCAGTGGT 59.734 61.111 11.47 0.00 46.67 4.16
431 436 2.512515 GGAGCCTTAGCGCAGTGG 60.513 66.667 11.47 9.34 46.67 4.00
432 437 2.512515 GGGAGCCTTAGCGCAGTG 60.513 66.667 11.47 0.00 46.67 3.66
433 438 3.787001 GGGGAGCCTTAGCGCAGT 61.787 66.667 11.47 0.00 46.67 4.40
434 439 2.932130 GAAGGGGAGCCTTAGCGCAG 62.932 65.000 11.47 0.00 46.67 5.18
435 440 3.009115 AAGGGGAGCCTTAGCGCA 61.009 61.111 11.47 0.00 46.67 6.09
436 441 2.203084 GAAGGGGAGCCTTAGCGC 60.203 66.667 0.00 0.00 46.67 5.92
437 442 1.910580 TTGGAAGGGGAGCCTTAGCG 61.911 60.000 0.00 0.00 46.67 4.26
438 443 0.331616 TTTGGAAGGGGAGCCTTAGC 59.668 55.000 0.00 0.00 40.32 3.09
439 444 1.683319 GCTTTGGAAGGGGAGCCTTAG 60.683 57.143 0.00 0.00 0.00 2.18
440 445 0.331616 GCTTTGGAAGGGGAGCCTTA 59.668 55.000 0.00 0.00 0.00 2.69
441 446 1.077445 GCTTTGGAAGGGGAGCCTT 59.923 57.895 0.00 0.00 0.00 4.35
442 447 1.729267 TTGCTTTGGAAGGGGAGCCT 61.729 55.000 0.00 0.00 34.30 4.58
443 448 1.228862 TTGCTTTGGAAGGGGAGCC 60.229 57.895 0.00 0.00 34.30 4.70
444 449 0.540597 ACTTGCTTTGGAAGGGGAGC 60.541 55.000 4.05 0.00 35.74 4.70
445 450 2.879103 TACTTGCTTTGGAAGGGGAG 57.121 50.000 4.05 0.00 0.00 4.30
446 451 2.817839 GCTTACTTGCTTTGGAAGGGGA 60.818 50.000 4.05 0.00 0.00 4.81
447 452 1.546029 GCTTACTTGCTTTGGAAGGGG 59.454 52.381 4.05 0.00 0.00 4.79
448 453 2.238521 TGCTTACTTGCTTTGGAAGGG 58.761 47.619 4.05 0.00 0.00 3.95
449 454 3.760684 AGATGCTTACTTGCTTTGGAAGG 59.239 43.478 4.05 0.00 0.00 3.46
450 455 4.456911 TCAGATGCTTACTTGCTTTGGAAG 59.543 41.667 0.00 0.00 0.00 3.46
451 456 4.397420 TCAGATGCTTACTTGCTTTGGAA 58.603 39.130 0.00 0.00 0.00 3.53
452 457 4.019792 TCAGATGCTTACTTGCTTTGGA 57.980 40.909 0.00 0.00 0.00 3.53
453 458 4.217118 ACTTCAGATGCTTACTTGCTTTGG 59.783 41.667 0.00 0.00 0.00 3.28
454 459 5.368256 ACTTCAGATGCTTACTTGCTTTG 57.632 39.130 0.00 0.00 0.00 2.77
455 460 8.792830 TTATACTTCAGATGCTTACTTGCTTT 57.207 30.769 0.00 0.00 0.00 3.51
456 461 8.970859 ATTATACTTCAGATGCTTACTTGCTT 57.029 30.769 0.00 0.00 0.00 3.91
457 462 8.970859 AATTATACTTCAGATGCTTACTTGCT 57.029 30.769 0.00 0.00 0.00 3.91
521 526 2.453521 TCACTGGTATAGGCAAGACGT 58.546 47.619 0.00 0.00 0.00 4.34
673 685 4.533815 TCGACCATACTAGTCATCAACCT 58.466 43.478 0.00 0.00 33.70 3.50
690 702 0.165944 CCTCGCAACACATTTCGACC 59.834 55.000 0.00 0.00 0.00 4.79
710 722 7.119699 GTGATGTCTTCAAATCTACAATGGTGA 59.880 37.037 0.00 0.00 35.70 4.02
727 739 4.640771 ATGGGTACAAGTGTGATGTCTT 57.359 40.909 0.00 0.00 32.27 3.01
817 832 2.051345 GCGTTTTGCGGTGTGGAG 60.051 61.111 0.00 0.00 41.69 3.86
879 895 8.523915 AGGAGTAATTGCATACATCAAATTCA 57.476 30.769 0.00 0.00 0.00 2.57
885 901 6.210584 TCGGATAGGAGTAATTGCATACATCA 59.789 38.462 0.00 0.00 0.00 3.07
887 903 6.605471 TCGGATAGGAGTAATTGCATACAT 57.395 37.500 0.00 0.00 0.00 2.29
906 922 9.803507 TCTAGACAAATATAGGACTAATTCGGA 57.196 33.333 0.00 0.00 0.00 4.55
935 958 4.097437 CGCAGGAAACACTACTACTATCCA 59.903 45.833 0.00 0.00 0.00 3.41
1094 1162 2.814183 GAACTGCCGACCGTCATCGT 62.814 60.000 0.00 0.00 40.59 3.73
1419 1511 2.123121 TGGTTGCCATTGGTGCCA 60.123 55.556 4.26 7.62 0.00 4.92
1446 1547 1.734137 GAGCTCCACGGCGAAGATA 59.266 57.895 16.62 0.00 37.29 1.98
1512 1613 3.761752 TCAGACTATTGATGTCGACACCA 59.238 43.478 22.71 16.18 39.24 4.17
2087 2250 1.452145 GCCTCCTACTCCGAGCAGAG 61.452 65.000 0.00 0.80 39.91 3.35
2088 2251 1.454111 GCCTCCTACTCCGAGCAGA 60.454 63.158 0.00 0.00 0.00 4.26
2521 2699 1.216977 CCGCTCCATGGTCGTACAA 59.783 57.895 21.26 0.00 0.00 2.41
2742 2924 2.792196 CGCCACATCAACAATCAATCCG 60.792 50.000 0.00 0.00 0.00 4.18
2745 2927 2.445427 TCCGCCACATCAACAATCAAT 58.555 42.857 0.00 0.00 0.00 2.57
3005 3187 3.204526 GAGAGATCAGAAATGGCACCTG 58.795 50.000 0.00 0.00 0.00 4.00
3067 3249 4.942761 AGTCAATTGCACAATTCCACTT 57.057 36.364 5.64 0.00 38.84 3.16
3068 3250 5.105635 CCATAGTCAATTGCACAATTCCACT 60.106 40.000 16.12 16.12 38.84 4.00
3080 3262 5.586243 ACATCGGAACTTCCATAGTCAATTG 59.414 40.000 8.59 0.00 35.91 2.32
3136 3318 9.643693 CATAAGAAAGATAAACCACAAAAGCAT 57.356 29.630 0.00 0.00 0.00 3.79
3141 3323 9.567776 TCAGTCATAAGAAAGATAAACCACAAA 57.432 29.630 0.00 0.00 0.00 2.83
3190 3372 3.023119 AGCACTTGTTTGACCACATTGA 58.977 40.909 0.00 0.00 0.00 2.57
3196 3378 4.085357 ACAGATAGCACTTGTTTGACCA 57.915 40.909 0.00 0.00 0.00 4.02
3197 3379 5.438761 AAACAGATAGCACTTGTTTGACC 57.561 39.130 7.53 0.00 32.36 4.02
3218 3400 7.016170 TGACGGATGGAGATATGATCCTAAAAA 59.984 37.037 0.00 0.00 37.74 1.94
3219 3401 6.496911 TGACGGATGGAGATATGATCCTAAAA 59.503 38.462 0.00 0.00 37.74 1.52
3220 3402 6.016555 TGACGGATGGAGATATGATCCTAAA 58.983 40.000 0.00 0.00 37.74 1.85
3221 3403 5.419155 GTGACGGATGGAGATATGATCCTAA 59.581 44.000 0.00 0.00 37.74 2.69
3222 3404 4.950475 GTGACGGATGGAGATATGATCCTA 59.050 45.833 0.00 0.00 37.74 2.94
3223 3405 3.766591 GTGACGGATGGAGATATGATCCT 59.233 47.826 0.00 0.00 37.74 3.24
3224 3406 3.118956 GGTGACGGATGGAGATATGATCC 60.119 52.174 0.00 0.00 37.35 3.36
3225 3407 3.511540 TGGTGACGGATGGAGATATGATC 59.488 47.826 0.00 0.00 0.00 2.92
3226 3408 3.510459 TGGTGACGGATGGAGATATGAT 58.490 45.455 0.00 0.00 0.00 2.45
3227 3409 2.957474 TGGTGACGGATGGAGATATGA 58.043 47.619 0.00 0.00 0.00 2.15
3228 3410 3.969287 ATGGTGACGGATGGAGATATG 57.031 47.619 0.00 0.00 0.00 1.78
3229 3411 4.678256 AGTATGGTGACGGATGGAGATAT 58.322 43.478 0.00 0.00 0.00 1.63
3230 3412 4.079970 GAGTATGGTGACGGATGGAGATA 58.920 47.826 0.00 0.00 0.00 1.98
3231 3413 2.894126 GAGTATGGTGACGGATGGAGAT 59.106 50.000 0.00 0.00 0.00 2.75
3232 3414 2.307768 GAGTATGGTGACGGATGGAGA 58.692 52.381 0.00 0.00 0.00 3.71
3233 3415 1.341531 GGAGTATGGTGACGGATGGAG 59.658 57.143 0.00 0.00 0.00 3.86
3234 3416 1.063190 AGGAGTATGGTGACGGATGGA 60.063 52.381 0.00 0.00 0.00 3.41
3235 3417 1.414158 AGGAGTATGGTGACGGATGG 58.586 55.000 0.00 0.00 0.00 3.51
3236 3418 2.296471 GGTAGGAGTATGGTGACGGATG 59.704 54.545 0.00 0.00 0.00 3.51
3237 3419 2.177233 AGGTAGGAGTATGGTGACGGAT 59.823 50.000 0.00 0.00 0.00 4.18
3238 3420 1.567649 AGGTAGGAGTATGGTGACGGA 59.432 52.381 0.00 0.00 0.00 4.69
3239 3421 2.068834 AGGTAGGAGTATGGTGACGG 57.931 55.000 0.00 0.00 0.00 4.79
3240 3422 3.949754 TGTAAGGTAGGAGTATGGTGACG 59.050 47.826 0.00 0.00 0.00 4.35
3241 3423 5.927281 TTGTAAGGTAGGAGTATGGTGAC 57.073 43.478 0.00 0.00 0.00 3.67
3242 3424 6.781014 CCTATTGTAAGGTAGGAGTATGGTGA 59.219 42.308 0.00 0.00 39.91 4.02
3243 3425 6.781014 TCCTATTGTAAGGTAGGAGTATGGTG 59.219 42.308 0.00 0.00 41.09 4.17
3244 3426 6.930475 TCCTATTGTAAGGTAGGAGTATGGT 58.070 40.000 0.00 0.00 41.09 3.55
3245 3427 7.850935 TTCCTATTGTAAGGTAGGAGTATGG 57.149 40.000 1.86 0.00 45.25 2.74
3246 3428 9.930693 GATTTCCTATTGTAAGGTAGGAGTATG 57.069 37.037 1.86 0.00 45.25 2.39
3247 3429 9.670442 TGATTTCCTATTGTAAGGTAGGAGTAT 57.330 33.333 1.86 1.14 45.25 2.12
3248 3430 9.496710 TTGATTTCCTATTGTAAGGTAGGAGTA 57.503 33.333 1.86 0.00 45.25 2.59
3249 3431 7.989947 TGATTTCCTATTGTAAGGTAGGAGT 57.010 36.000 1.86 0.00 45.25 3.85
3250 3432 9.853177 ATTTGATTTCCTATTGTAAGGTAGGAG 57.147 33.333 1.86 0.00 45.25 3.69
3251 3433 9.627123 CATTTGATTTCCTATTGTAAGGTAGGA 57.373 33.333 0.00 0.00 43.54 2.94
3252 3434 9.627123 TCATTTGATTTCCTATTGTAAGGTAGG 57.373 33.333 0.00 0.00 39.06 3.18
3272 3454 9.162793 GCGAGTACTGATTTTATCATTCATTTG 57.837 33.333 0.00 0.00 38.85 2.32
3273 3455 8.892723 TGCGAGTACTGATTTTATCATTCATTT 58.107 29.630 0.00 0.00 38.85 2.32
3274 3456 8.437360 TGCGAGTACTGATTTTATCATTCATT 57.563 30.769 0.00 0.00 38.85 2.57
3275 3457 7.928167 TCTGCGAGTACTGATTTTATCATTCAT 59.072 33.333 0.00 0.00 38.85 2.57
3276 3458 7.264947 TCTGCGAGTACTGATTTTATCATTCA 58.735 34.615 0.00 0.00 38.85 2.57
3277 3459 7.700322 TCTGCGAGTACTGATTTTATCATTC 57.300 36.000 0.00 0.00 38.85 2.67
3278 3460 7.766278 ACTTCTGCGAGTACTGATTTTATCATT 59.234 33.333 0.00 0.00 38.85 2.57
3279 3461 7.268586 ACTTCTGCGAGTACTGATTTTATCAT 58.731 34.615 0.00 0.00 38.85 2.45
3280 3462 6.631016 ACTTCTGCGAGTACTGATTTTATCA 58.369 36.000 0.00 0.00 37.76 2.15
3281 3463 7.489757 AGAACTTCTGCGAGTACTGATTTTATC 59.510 37.037 0.00 0.00 0.00 1.75
3282 3464 7.324178 AGAACTTCTGCGAGTACTGATTTTAT 58.676 34.615 0.00 0.00 0.00 1.40
3283 3465 6.688578 AGAACTTCTGCGAGTACTGATTTTA 58.311 36.000 0.00 0.00 0.00 1.52
3284 3466 5.542779 AGAACTTCTGCGAGTACTGATTTT 58.457 37.500 0.00 0.00 0.00 1.82
3285 3467 5.140747 AGAACTTCTGCGAGTACTGATTT 57.859 39.130 0.00 0.00 0.00 2.17
3286 3468 4.792521 AGAACTTCTGCGAGTACTGATT 57.207 40.909 0.00 0.00 0.00 2.57
3287 3469 5.899120 TTAGAACTTCTGCGAGTACTGAT 57.101 39.130 0.00 0.00 0.00 2.90
3288 3470 5.700722 TTTAGAACTTCTGCGAGTACTGA 57.299 39.130 0.00 0.00 0.00 3.41
3289 3471 7.008447 GTGTATTTAGAACTTCTGCGAGTACTG 59.992 40.741 0.00 0.00 0.00 2.74
3290 3472 7.028361 GTGTATTTAGAACTTCTGCGAGTACT 58.972 38.462 0.00 0.00 0.00 2.73
3291 3473 6.021626 CGTGTATTTAGAACTTCTGCGAGTAC 60.022 42.308 1.17 0.00 0.00 2.73
3292 3474 6.025896 CGTGTATTTAGAACTTCTGCGAGTA 58.974 40.000 1.17 0.00 0.00 2.59
3293 3475 4.857588 CGTGTATTTAGAACTTCTGCGAGT 59.142 41.667 1.17 0.00 0.00 4.18
3294 3476 5.093457 TCGTGTATTTAGAACTTCTGCGAG 58.907 41.667 1.17 0.00 0.00 5.03
3295 3477 5.050644 TCGTGTATTTAGAACTTCTGCGA 57.949 39.130 1.17 0.00 0.00 5.10
3296 3478 5.950965 ATCGTGTATTTAGAACTTCTGCG 57.049 39.130 1.17 0.00 0.00 5.18
3297 3479 8.408743 AGTAATCGTGTATTTAGAACTTCTGC 57.591 34.615 1.17 0.00 0.00 4.26
3311 3493 9.454585 CGGAAAATATGTAGAAGTAATCGTGTA 57.545 33.333 0.00 0.00 0.00 2.90
3312 3494 7.977853 ACGGAAAATATGTAGAAGTAATCGTGT 59.022 33.333 0.00 0.00 0.00 4.49
3313 3495 8.348983 ACGGAAAATATGTAGAAGTAATCGTG 57.651 34.615 0.00 0.00 0.00 4.35
3314 3496 8.192774 TGACGGAAAATATGTAGAAGTAATCGT 58.807 33.333 0.00 0.00 0.00 3.73
3315 3497 8.570096 TGACGGAAAATATGTAGAAGTAATCG 57.430 34.615 0.00 0.00 0.00 3.34
3319 3501 9.491675 TGTTTTGACGGAAAATATGTAGAAGTA 57.508 29.630 0.00 0.00 35.96 2.24
3320 3502 8.385898 TGTTTTGACGGAAAATATGTAGAAGT 57.614 30.769 0.00 0.00 35.96 3.01
3321 3503 9.840427 ATTGTTTTGACGGAAAATATGTAGAAG 57.160 29.630 0.00 0.00 35.96 2.85
3331 3513 9.587772 TCAATTTCTTATTGTTTTGACGGAAAA 57.412 25.926 0.00 0.00 0.00 2.29
3332 3514 9.757227 ATCAATTTCTTATTGTTTTGACGGAAA 57.243 25.926 0.00 0.00 0.00 3.13
3333 3515 9.757227 AATCAATTTCTTATTGTTTTGACGGAA 57.243 25.926 0.00 0.00 0.00 4.30
3334 3516 9.190858 CAATCAATTTCTTATTGTTTTGACGGA 57.809 29.630 0.00 0.00 31.49 4.69
3335 3517 8.977505 ACAATCAATTTCTTATTGTTTTGACGG 58.022 29.630 15.69 0.00 40.07 4.79
3363 3545 4.717233 TGAAGACTGCAAGCAAGAAAAA 57.283 36.364 0.00 0.00 37.60 1.94
3364 3546 4.581824 AGATGAAGACTGCAAGCAAGAAAA 59.418 37.500 0.00 0.00 37.60 2.29
3365 3547 4.139786 AGATGAAGACTGCAAGCAAGAAA 58.860 39.130 0.00 0.00 37.60 2.52
3366 3548 3.748083 AGATGAAGACTGCAAGCAAGAA 58.252 40.909 0.00 0.00 37.60 2.52
3367 3549 3.244318 TGAGATGAAGACTGCAAGCAAGA 60.244 43.478 0.00 0.00 37.60 3.02
3368 3550 3.072211 TGAGATGAAGACTGCAAGCAAG 58.928 45.455 0.00 0.00 37.60 4.01
3369 3551 3.130280 TGAGATGAAGACTGCAAGCAA 57.870 42.857 0.00 0.00 37.60 3.91
3370 3552 2.845363 TGAGATGAAGACTGCAAGCA 57.155 45.000 0.00 0.00 37.60 3.91
3371 3553 3.743567 CTTGAGATGAAGACTGCAAGC 57.256 47.619 0.00 0.00 37.60 4.01
3372 3554 3.072211 TGCTTGAGATGAAGACTGCAAG 58.928 45.455 0.00 0.00 42.29 4.01
3373 3555 2.810274 GTGCTTGAGATGAAGACTGCAA 59.190 45.455 0.00 0.00 0.00 4.08
3374 3556 2.224354 TGTGCTTGAGATGAAGACTGCA 60.224 45.455 0.00 0.00 0.00 4.41
3375 3557 2.420642 TGTGCTTGAGATGAAGACTGC 58.579 47.619 0.00 0.00 0.00 4.40
3376 3558 3.188048 GGTTGTGCTTGAGATGAAGACTG 59.812 47.826 0.00 0.00 0.00 3.51
3377 3559 3.181451 TGGTTGTGCTTGAGATGAAGACT 60.181 43.478 0.00 0.00 0.00 3.24
3378 3560 3.141398 TGGTTGTGCTTGAGATGAAGAC 58.859 45.455 0.00 0.00 0.00 3.01
3379 3561 3.181451 ACTGGTTGTGCTTGAGATGAAGA 60.181 43.478 0.00 0.00 0.00 2.87
3380 3562 3.058432 CACTGGTTGTGCTTGAGATGAAG 60.058 47.826 0.00 0.00 40.06 3.02
3381 3563 2.880268 CACTGGTTGTGCTTGAGATGAA 59.120 45.455 0.00 0.00 40.06 2.57
3382 3564 2.497138 CACTGGTTGTGCTTGAGATGA 58.503 47.619 0.00 0.00 40.06 2.92
3383 3565 2.983402 CACTGGTTGTGCTTGAGATG 57.017 50.000 0.00 0.00 40.06 2.90
3395 3577 7.556844 CAGTATCTATTAGGACAACACTGGTT 58.443 38.462 0.00 0.00 37.87 3.67
3396 3578 6.407074 GCAGTATCTATTAGGACAACACTGGT 60.407 42.308 0.00 0.00 33.24 4.00
3397 3579 5.986135 GCAGTATCTATTAGGACAACACTGG 59.014 44.000 0.00 0.00 33.24 4.00
3398 3580 6.699204 CAGCAGTATCTATTAGGACAACACTG 59.301 42.308 0.00 0.00 35.20 3.66
3399 3581 6.607600 TCAGCAGTATCTATTAGGACAACACT 59.392 38.462 0.00 0.00 0.00 3.55
3400 3582 6.697892 GTCAGCAGTATCTATTAGGACAACAC 59.302 42.308 0.00 0.00 0.00 3.32
3401 3583 6.379988 TGTCAGCAGTATCTATTAGGACAACA 59.620 38.462 0.00 0.00 30.63 3.33
3402 3584 6.806751 TGTCAGCAGTATCTATTAGGACAAC 58.193 40.000 0.00 0.00 30.63 3.32
3403 3585 7.418337 TTGTCAGCAGTATCTATTAGGACAA 57.582 36.000 0.00 0.00 39.56 3.18
3404 3586 7.124298 ACTTTGTCAGCAGTATCTATTAGGACA 59.876 37.037 0.00 0.00 0.00 4.02
3405 3587 7.493367 ACTTTGTCAGCAGTATCTATTAGGAC 58.507 38.462 0.00 0.00 0.00 3.85
3406 3588 7.661536 ACTTTGTCAGCAGTATCTATTAGGA 57.338 36.000 0.00 0.00 0.00 2.94
3407 3589 7.596995 GCTACTTTGTCAGCAGTATCTATTAGG 59.403 40.741 0.00 0.00 37.73 2.69
3408 3590 8.138074 TGCTACTTTGTCAGCAGTATCTATTAG 58.862 37.037 0.00 0.00 42.68 1.73
3409 3591 8.007405 TGCTACTTTGTCAGCAGTATCTATTA 57.993 34.615 0.00 0.00 42.68 0.98
3410 3592 6.878317 TGCTACTTTGTCAGCAGTATCTATT 58.122 36.000 0.00 0.00 42.68 1.73
3411 3593 6.471233 TGCTACTTTGTCAGCAGTATCTAT 57.529 37.500 0.00 0.00 42.68 1.98
3412 3594 5.914898 TGCTACTTTGTCAGCAGTATCTA 57.085 39.130 0.00 0.00 42.68 1.98
3413 3595 4.808414 TGCTACTTTGTCAGCAGTATCT 57.192 40.909 0.00 0.00 42.68 1.98
3466 3648 9.988815 GAAAGTAGTCCTATACACATGATGAAT 57.011 33.333 0.00 0.00 0.00 2.57
3467 3649 8.977412 TGAAAGTAGTCCTATACACATGATGAA 58.023 33.333 0.00 0.00 0.00 2.57
3468 3650 8.533569 TGAAAGTAGTCCTATACACATGATGA 57.466 34.615 0.00 0.00 0.00 2.92
3469 3651 9.201127 CATGAAAGTAGTCCTATACACATGATG 57.799 37.037 0.00 0.00 36.82 3.07
3470 3652 8.928448 ACATGAAAGTAGTCCTATACACATGAT 58.072 33.333 0.00 0.00 37.38 2.45
3471 3653 8.306313 ACATGAAAGTAGTCCTATACACATGA 57.694 34.615 0.00 0.00 37.38 3.07
3474 3656 8.186163 CGTTACATGAAAGTAGTCCTATACACA 58.814 37.037 0.00 0.00 0.00 3.72
3475 3657 8.186821 ACGTTACATGAAAGTAGTCCTATACAC 58.813 37.037 0.00 0.00 0.00 2.90
3476 3658 8.284945 ACGTTACATGAAAGTAGTCCTATACA 57.715 34.615 0.00 0.00 0.00 2.29
3479 3661 9.182214 TCTAACGTTACATGAAAGTAGTCCTAT 57.818 33.333 3.29 0.00 0.00 2.57
3480 3662 8.565896 TCTAACGTTACATGAAAGTAGTCCTA 57.434 34.615 3.29 0.00 0.00 2.94
3481 3663 7.458409 TCTAACGTTACATGAAAGTAGTCCT 57.542 36.000 3.29 0.00 0.00 3.85
3482 3664 8.189460 AGATCTAACGTTACATGAAAGTAGTCC 58.811 37.037 3.29 0.00 0.00 3.85
3483 3665 9.011407 CAGATCTAACGTTACATGAAAGTAGTC 57.989 37.037 3.29 0.00 0.00 2.59
3484 3666 8.737175 TCAGATCTAACGTTACATGAAAGTAGT 58.263 33.333 3.29 0.00 0.00 2.73
3485 3667 9.569167 TTCAGATCTAACGTTACATGAAAGTAG 57.431 33.333 3.29 0.00 0.00 2.57
3486 3668 9.917129 TTTCAGATCTAACGTTACATGAAAGTA 57.083 29.630 18.79 6.90 32.24 2.24
3487 3669 8.709646 GTTTCAGATCTAACGTTACATGAAAGT 58.290 33.333 21.07 0.00 36.43 2.66
3488 3670 8.708742 TGTTTCAGATCTAACGTTACATGAAAG 58.291 33.333 21.07 8.48 36.43 2.62
3489 3671 8.596271 TGTTTCAGATCTAACGTTACATGAAA 57.404 30.769 18.79 18.79 34.15 2.69
3490 3672 8.596271 TTGTTTCAGATCTAACGTTACATGAA 57.404 30.769 3.29 9.25 0.00 2.57
3491 3673 8.596271 TTTGTTTCAGATCTAACGTTACATGA 57.404 30.769 3.29 0.81 0.00 3.07
3492 3674 9.825972 ATTTTGTTTCAGATCTAACGTTACATG 57.174 29.630 3.29 1.39 0.00 3.21
3493 3675 9.825972 CATTTTGTTTCAGATCTAACGTTACAT 57.174 29.630 3.29 0.00 0.00 2.29
3494 3676 7.801315 GCATTTTGTTTCAGATCTAACGTTACA 59.199 33.333 3.29 0.00 0.00 2.41
3495 3677 8.015658 AGCATTTTGTTTCAGATCTAACGTTAC 58.984 33.333 3.29 0.00 0.00 2.50
3496 3678 8.015087 CAGCATTTTGTTTCAGATCTAACGTTA 58.985 33.333 7.94 7.94 0.00 3.18
3497 3679 6.857964 CAGCATTTTGTTTCAGATCTAACGTT 59.142 34.615 5.88 5.88 0.00 3.99
3498 3680 6.017109 ACAGCATTTTGTTTCAGATCTAACGT 60.017 34.615 0.00 0.00 0.00 3.99
3499 3681 6.303970 CACAGCATTTTGTTTCAGATCTAACG 59.696 38.462 0.00 0.00 0.00 3.18
3500 3682 6.583806 CCACAGCATTTTGTTTCAGATCTAAC 59.416 38.462 0.00 0.00 0.00 2.34
3501 3683 6.489700 TCCACAGCATTTTGTTTCAGATCTAA 59.510 34.615 0.00 0.00 0.00 2.10
3502 3684 6.003326 TCCACAGCATTTTGTTTCAGATCTA 58.997 36.000 0.00 0.00 0.00 1.98
3503 3685 4.828939 TCCACAGCATTTTGTTTCAGATCT 59.171 37.500 0.00 0.00 0.00 2.75
3504 3686 5.048504 TCTCCACAGCATTTTGTTTCAGATC 60.049 40.000 0.00 0.00 0.00 2.75
3505 3687 4.828939 TCTCCACAGCATTTTGTTTCAGAT 59.171 37.500 0.00 0.00 0.00 2.90
3506 3688 4.206375 TCTCCACAGCATTTTGTTTCAGA 58.794 39.130 0.00 0.00 0.00 3.27
3507 3689 4.572985 TCTCCACAGCATTTTGTTTCAG 57.427 40.909 0.00 0.00 0.00 3.02
3508 3690 4.583907 TGATCTCCACAGCATTTTGTTTCA 59.416 37.500 0.00 0.00 0.00 2.69
3509 3691 5.125100 TGATCTCCACAGCATTTTGTTTC 57.875 39.130 0.00 0.00 0.00 2.78
3510 3692 5.337009 GGATGATCTCCACAGCATTTTGTTT 60.337 40.000 6.39 0.00 44.26 2.83
3511 3693 4.159135 GGATGATCTCCACAGCATTTTGTT 59.841 41.667 6.39 0.00 44.26 2.83
3512 3694 3.698040 GGATGATCTCCACAGCATTTTGT 59.302 43.478 6.39 0.00 44.26 2.83
3513 3695 3.067742 GGGATGATCTCCACAGCATTTTG 59.932 47.826 11.73 0.00 46.98 2.44
3514 3696 3.053095 AGGGATGATCTCCACAGCATTTT 60.053 43.478 11.73 0.00 46.98 1.82
3515 3697 2.512896 AGGGATGATCTCCACAGCATTT 59.487 45.455 11.73 0.00 46.98 2.32
3516 3698 2.133520 AGGGATGATCTCCACAGCATT 58.866 47.619 11.73 0.00 46.98 3.56
3517 3699 1.817087 AGGGATGATCTCCACAGCAT 58.183 50.000 11.73 0.00 46.98 3.79
3518 3700 1.211212 CAAGGGATGATCTCCACAGCA 59.789 52.381 11.73 0.00 46.98 4.41
3519 3701 1.476471 CCAAGGGATGATCTCCACAGC 60.476 57.143 11.73 0.00 46.98 4.40
3520 3702 1.476471 GCCAAGGGATGATCTCCACAG 60.476 57.143 11.73 2.91 46.98 3.66
3521 3703 0.548031 GCCAAGGGATGATCTCCACA 59.452 55.000 11.73 0.00 46.98 4.17
3522 3704 0.179006 GGCCAAGGGATGATCTCCAC 60.179 60.000 0.00 0.00 46.98 4.02
3523 3705 0.624206 TGGCCAAGGGATGATCTCCA 60.624 55.000 0.61 0.00 46.98 3.86
3524 3706 0.110104 CTGGCCAAGGGATGATCTCC 59.890 60.000 7.01 0.00 44.11 3.71
3525 3707 0.110104 CCTGGCCAAGGGATGATCTC 59.890 60.000 7.01 0.00 43.15 2.75
3526 3708 2.238530 CCTGGCCAAGGGATGATCT 58.761 57.895 7.01 0.00 43.15 2.75
3527 3709 4.916358 CCTGGCCAAGGGATGATC 57.084 61.111 7.01 0.00 43.15 2.92
3535 3717 2.791170 GCAGATTCTCCTGGCCAAG 58.209 57.895 7.01 0.00 34.82 3.61
3540 3722 0.617413 ACAGTGGCAGATTCTCCTGG 59.383 55.000 0.00 0.00 34.82 4.45
3541 3723 2.486472 AACAGTGGCAGATTCTCCTG 57.514 50.000 0.00 0.00 37.23 3.86
3542 3724 3.445008 TCTAACAGTGGCAGATTCTCCT 58.555 45.455 0.00 0.00 0.00 3.69
3543 3725 3.196685 ACTCTAACAGTGGCAGATTCTCC 59.803 47.826 0.00 0.00 32.26 3.71
3544 3726 4.464069 ACTCTAACAGTGGCAGATTCTC 57.536 45.455 0.00 0.00 32.26 2.87
3545 3727 4.899352 AACTCTAACAGTGGCAGATTCT 57.101 40.909 0.00 0.00 34.56 2.40
3546 3728 5.121454 CAGAAACTCTAACAGTGGCAGATTC 59.879 44.000 0.00 0.00 34.56 2.52
3547 3729 4.999950 CAGAAACTCTAACAGTGGCAGATT 59.000 41.667 0.00 0.00 34.56 2.40
3548 3730 4.284490 TCAGAAACTCTAACAGTGGCAGAT 59.716 41.667 0.00 0.00 34.56 2.90
3549 3731 3.641436 TCAGAAACTCTAACAGTGGCAGA 59.359 43.478 0.00 0.00 34.56 4.26
3550 3732 3.993081 CTCAGAAACTCTAACAGTGGCAG 59.007 47.826 0.00 0.00 34.56 4.85
3551 3733 3.388024 ACTCAGAAACTCTAACAGTGGCA 59.612 43.478 0.00 0.00 34.56 4.92
3552 3734 3.743396 CACTCAGAAACTCTAACAGTGGC 59.257 47.826 0.00 0.00 34.56 5.01
3553 3735 4.950050 ACACTCAGAAACTCTAACAGTGG 58.050 43.478 0.00 0.00 34.58 4.00
3554 3736 6.313905 ACAAACACTCAGAAACTCTAACAGTG 59.686 38.462 0.00 0.00 35.55 3.66
3555 3737 6.407202 ACAAACACTCAGAAACTCTAACAGT 58.593 36.000 0.00 0.00 36.64 3.55
3556 3738 6.910536 ACAAACACTCAGAAACTCTAACAG 57.089 37.500 0.00 0.00 0.00 3.16
3557 3739 7.681939 AAACAAACACTCAGAAACTCTAACA 57.318 32.000 0.00 0.00 0.00 2.41
3558 3740 8.336080 CCTAAACAAACACTCAGAAACTCTAAC 58.664 37.037 0.00 0.00 0.00 2.34
3559 3741 7.012044 GCCTAAACAAACACTCAGAAACTCTAA 59.988 37.037 0.00 0.00 0.00 2.10
3560 3742 6.482308 GCCTAAACAAACACTCAGAAACTCTA 59.518 38.462 0.00 0.00 0.00 2.43
3561 3743 5.297029 GCCTAAACAAACACTCAGAAACTCT 59.703 40.000 0.00 0.00 0.00 3.24
3562 3744 5.065988 TGCCTAAACAAACACTCAGAAACTC 59.934 40.000 0.00 0.00 0.00 3.01
3563 3745 4.947388 TGCCTAAACAAACACTCAGAAACT 59.053 37.500 0.00 0.00 0.00 2.66
3564 3746 5.243426 TGCCTAAACAAACACTCAGAAAC 57.757 39.130 0.00 0.00 0.00 2.78
3565 3747 5.417580 AGTTGCCTAAACAAACACTCAGAAA 59.582 36.000 0.00 0.00 41.61 2.52
3566 3748 4.947388 AGTTGCCTAAACAAACACTCAGAA 59.053 37.500 0.00 0.00 41.61 3.02
3567 3749 4.523083 AGTTGCCTAAACAAACACTCAGA 58.477 39.130 0.00 0.00 41.61 3.27
3568 3750 4.900635 AGTTGCCTAAACAAACACTCAG 57.099 40.909 0.00 0.00 41.61 3.35
3569 3751 4.461081 ACAAGTTGCCTAAACAAACACTCA 59.539 37.500 1.81 0.00 41.61 3.41
3570 3752 4.993905 ACAAGTTGCCTAAACAAACACTC 58.006 39.130 1.81 0.00 41.61 3.51
3571 3753 5.400066 AACAAGTTGCCTAAACAAACACT 57.600 34.783 1.81 0.00 41.61 3.55
3572 3754 6.303370 CAAAACAAGTTGCCTAAACAAACAC 58.697 36.000 1.81 0.00 41.61 3.32
3573 3755 5.409826 CCAAAACAAGTTGCCTAAACAAACA 59.590 36.000 1.81 0.00 41.61 2.83
3574 3756 5.410132 ACCAAAACAAGTTGCCTAAACAAAC 59.590 36.000 1.81 0.00 41.61 2.93
3585 3767 5.641209 TCAAACCATCAACCAAAACAAGTTG 59.359 36.000 0.00 0.00 43.78 3.16
3592 3774 6.148480 CACAAAGTTCAAACCATCAACCAAAA 59.852 34.615 0.00 0.00 0.00 2.44
3596 3778 4.119136 CCACAAAGTTCAAACCATCAACC 58.881 43.478 0.00 0.00 0.00 3.77
3609 3791 3.023119 TGCACAAGATCACCACAAAGTT 58.977 40.909 0.00 0.00 0.00 2.66
3611 3793 3.067180 ACTTGCACAAGATCACCACAAAG 59.933 43.478 16.95 0.00 40.79 2.77
3616 3798 1.948834 CACACTTGCACAAGATCACCA 59.051 47.619 16.95 0.00 40.79 4.17
3636 3818 2.558313 GCAGCTCAAACCAGCGTC 59.442 61.111 0.00 0.00 44.82 5.19
3676 3858 2.229543 CTGCAACAATCAGGCAAAGCTA 59.770 45.455 0.00 0.00 37.06 3.32
3701 3883 5.718130 TCACGGATAGGAGGAAGAAAACTAA 59.282 40.000 0.00 0.00 0.00 2.24
3724 3906 4.887655 TCAGAAACTCAAAAGGAAACCCTC 59.112 41.667 0.00 0.00 32.44 4.30
3728 3910 5.836347 AGCATCAGAAACTCAAAAGGAAAC 58.164 37.500 0.00 0.00 0.00 2.78
3729 3911 5.829924 AGAGCATCAGAAACTCAAAAGGAAA 59.170 36.000 5.98 0.00 37.82 3.13
3730 3912 5.380043 AGAGCATCAGAAACTCAAAAGGAA 58.620 37.500 5.98 0.00 37.82 3.36
3747 3929 3.565482 CACAGTTTACACACCAAGAGCAT 59.435 43.478 0.00 0.00 0.00 3.79
3758 3940 1.944709 AGAAACCGCCACAGTTTACAC 59.055 47.619 0.00 0.00 37.55 2.90
3815 3998 5.016831 GGTTCAAAAGTCCAGGGATTACAT 58.983 41.667 0.00 0.00 0.00 2.29
3817 4000 4.403734 TGGTTCAAAAGTCCAGGGATTAC 58.596 43.478 0.00 0.00 0.00 1.89
3857 4040 1.735571 CGGTGACAAAATTAGGGGACG 59.264 52.381 0.00 0.00 0.00 4.79
3867 4050 1.072505 GGAGGGCTCGGTGACAAAA 59.927 57.895 0.00 0.00 0.00 2.44
3878 4061 4.934356 TCTTGTTTTCATATTGGAGGGCT 58.066 39.130 0.00 0.00 0.00 5.19
3883 4066 6.830324 CCCAGAGATCTTGTTTTCATATTGGA 59.170 38.462 0.00 0.00 0.00 3.53
3884 4067 6.460676 GCCCAGAGATCTTGTTTTCATATTGG 60.461 42.308 0.00 0.00 0.00 3.16
3885 4068 6.460676 GGCCCAGAGATCTTGTTTTCATATTG 60.461 42.308 0.00 0.00 0.00 1.90
3886 4069 5.595952 GGCCCAGAGATCTTGTTTTCATATT 59.404 40.000 0.00 0.00 0.00 1.28
3887 4070 5.136105 GGCCCAGAGATCTTGTTTTCATAT 58.864 41.667 0.00 0.00 0.00 1.78
3888 4071 4.018506 TGGCCCAGAGATCTTGTTTTCATA 60.019 41.667 0.00 0.00 0.00 2.15
3890 4073 2.108075 TGGCCCAGAGATCTTGTTTTCA 59.892 45.455 0.00 0.00 0.00 2.69
3891 4074 2.795329 TGGCCCAGAGATCTTGTTTTC 58.205 47.619 0.00 0.00 0.00 2.29
3902 4095 1.207089 TCAACGTCTTATGGCCCAGAG 59.793 52.381 0.00 0.00 0.00 3.35
3909 4102 4.082787 AGCAAAACCATCAACGTCTTATGG 60.083 41.667 17.59 17.59 44.76 2.74
3914 4107 2.571212 TCAGCAAAACCATCAACGTCT 58.429 42.857 0.00 0.00 0.00 4.18
3936 4129 1.133976 GCTTGGTCACAGCCCTATGAT 60.134 52.381 0.00 0.00 0.00 2.45
3937 4130 0.253044 GCTTGGTCACAGCCCTATGA 59.747 55.000 0.00 0.00 0.00 2.15
3938 4131 0.254178 AGCTTGGTCACAGCCCTATG 59.746 55.000 0.00 0.00 0.00 2.23
3947 4140 0.106708 TCCACTGTGAGCTTGGTCAC 59.893 55.000 21.57 21.57 46.08 3.67
3961 4154 1.686355 TTTGCACCAATTCGTCCACT 58.314 45.000 0.00 0.00 0.00 4.00
4013 4206 4.502282 CCGATTTTCTCTGATCTTCACTCG 59.498 45.833 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.