Multiple sequence alignment - TraesCS2B01G219900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G219900 chr2B 100.000 3206 0 0 1 3206 210456038 210459243 0.000000e+00 5921.0
1 TraesCS2B01G219900 chr2B 89.119 193 15 5 3016 3203 19134806 19134615 5.350000e-58 235.0
2 TraesCS2B01G219900 chr2B 80.569 211 21 6 2979 3189 632398587 632398397 9.270000e-31 145.0
3 TraesCS2B01G219900 chr2A 92.244 1805 76 22 645 2438 149210024 149208273 0.000000e+00 2499.0
4 TraesCS2B01G219900 chr2A 94.015 518 17 7 2 509 149210539 149210026 0.000000e+00 773.0
5 TraesCS2B01G219900 chr2A 97.778 90 2 0 2890 2979 543700908 543700819 4.280000e-34 156.0
6 TraesCS2B01G219900 chr2A 90.909 99 5 3 562 656 245942998 245943096 2.600000e-26 130.0
7 TraesCS2B01G219900 chr2A 81.250 112 21 0 1486 1597 447285367 447285478 1.220000e-14 91.6
8 TraesCS2B01G219900 chr2D 94.255 1201 42 12 1479 2664 152097986 152099174 0.000000e+00 1810.0
9 TraesCS2B01G219900 chr2D 94.293 841 35 4 643 1481 152097073 152097902 0.000000e+00 1275.0
10 TraesCS2B01G219900 chr2D 96.359 412 7 3 103 510 152096667 152097074 0.000000e+00 671.0
11 TraesCS2B01G219900 chr2D 81.250 112 21 0 1486 1597 337134716 337134827 1.220000e-14 91.6
12 TraesCS2B01G219900 chr5A 91.429 210 18 0 2979 3188 535553087 535552878 4.050000e-74 289.0
13 TraesCS2B01G219900 chr5A 90.000 90 5 4 558 645 211762977 211763064 2.610000e-21 113.0
14 TraesCS2B01G219900 chr4D 91.209 182 12 3 3011 3189 121820260 121820440 8.880000e-61 244.0
15 TraesCS2B01G219900 chr4D 82.569 218 9 15 2979 3189 25395816 25395621 7.120000e-37 165.0
16 TraesCS2B01G219900 chr3A 91.573 178 14 1 3012 3188 661840006 661839829 8.880000e-61 244.0
17 TraesCS2B01G219900 chr3A 86.905 168 19 2 2673 2837 661840186 661840019 5.460000e-43 185.0
18 TraesCS2B01G219900 chr7A 90.608 181 15 1 3011 3189 6659199 6659379 4.130000e-59 239.0
19 TraesCS2B01G219900 chr7A 89.888 89 5 3 558 644 24692850 24692936 9.400000e-21 111.0
20 TraesCS2B01G219900 chr7A 90.000 90 4 5 558 645 522923861 522923947 9.400000e-21 111.0
21 TraesCS2B01G219900 chr7A 77.209 215 20 13 2979 3189 406065713 406065524 7.320000e-17 99.0
22 TraesCS2B01G219900 chr7A 94.643 56 1 2 508 562 103151079 103151133 5.700000e-13 86.1
23 TraesCS2B01G219900 chr3D 90.556 180 15 1 3011 3188 551431590 551431769 1.490000e-58 237.0
24 TraesCS2B01G219900 chr3D 98.889 90 1 0 2890 2979 46286205 46286294 9.200000e-36 161.0
25 TraesCS2B01G219900 chr3D 97.802 91 2 0 2889 2979 80427948 80427858 1.190000e-34 158.0
26 TraesCS2B01G219900 chr3D 97.778 90 2 0 2890 2979 21905543 21905632 4.280000e-34 156.0
27 TraesCS2B01G219900 chr3D 89.706 68 4 3 508 574 548253407 548253342 2.050000e-12 84.2
28 TraesCS2B01G219900 chr1D 89.119 193 17 3 3016 3204 316626946 316626754 1.490000e-58 237.0
29 TraesCS2B01G219900 chr1D 97.778 90 2 0 2890 2979 254498914 254499003 4.280000e-34 156.0
30 TraesCS2B01G219900 chr1D 97.778 90 2 0 2890 2979 318665396 318665485 4.280000e-34 156.0
31 TraesCS2B01G219900 chr1D 88.764 89 6 3 558 644 437855291 437855377 4.370000e-19 106.0
32 TraesCS2B01G219900 chr1D 92.063 63 2 3 509 569 314336728 314336667 5.700000e-13 86.1
33 TraesCS2B01G219900 chr6D 88.601 193 18 3 3016 3204 454176567 454176375 6.920000e-57 231.0
34 TraesCS2B01G219900 chr6D 89.726 146 11 3 2696 2839 322579823 322579680 1.960000e-42 183.0
35 TraesCS2B01G219900 chr6D 91.935 62 3 2 505 565 63130837 63130777 5.700000e-13 86.1
36 TraesCS2B01G219900 chr5D 90.751 173 16 0 3016 3188 470382807 470382635 6.920000e-57 231.0
37 TraesCS2B01G219900 chr5D 91.034 145 12 1 2696 2839 470382967 470382823 9.070000e-46 195.0
38 TraesCS2B01G219900 chr5D 86.628 172 16 5 2673 2839 532649642 532649473 1.960000e-42 183.0
39 TraesCS2B01G219900 chr5D 86.957 161 16 4 2673 2830 44412049 44411891 3.290000e-40 176.0
40 TraesCS2B01G219900 chr5D 83.412 211 13 8 2979 3188 233814516 233814705 3.290000e-40 176.0
41 TraesCS2B01G219900 chr5D 85.882 170 19 4 2673 2839 559110123 559110290 3.290000e-40 176.0
42 TraesCS2B01G219900 chr5D 98.077 52 1 0 2979 3030 18210215 18210266 1.220000e-14 91.6
43 TraesCS2B01G219900 chr5D 92.063 63 2 3 508 569 420372765 420372825 5.700000e-13 86.1
44 TraesCS2B01G219900 chr5D 100.000 30 0 0 2663 2692 540240902 540240931 4.470000e-04 56.5
45 TraesCS2B01G219900 chr4A 92.029 138 11 0 2701 2838 323881592 323881455 9.070000e-46 195.0
46 TraesCS2B01G219900 chr4A 89.011 91 8 2 556 644 664183229 664183319 9.400000e-21 111.0
47 TraesCS2B01G219900 chr7D 91.429 140 10 2 2702 2839 603808085 603807946 1.170000e-44 191.0
48 TraesCS2B01G219900 chr7D 85.465 172 15 7 2673 2839 554866912 554867078 1.530000e-38 171.0
49 TraesCS2B01G219900 chr7D 97.778 90 2 0 2890 2979 231622484 231622573 4.280000e-34 156.0
50 TraesCS2B01G219900 chr7D 94.643 56 1 2 508 562 55416970 55417024 5.700000e-13 86.1
51 TraesCS2B01G219900 chr6B 81.116 233 17 12 2979 3204 29417557 29417345 9.200000e-36 161.0
52 TraesCS2B01G219900 chr6B 89.130 92 6 3 558 647 482473905 482473994 9.400000e-21 111.0
53 TraesCS2B01G219900 chrUn 97.778 90 2 0 2890 2979 445812147 445812058 4.280000e-34 156.0
54 TraesCS2B01G219900 chrUn 92.593 54 2 2 511 562 96020777 96020724 3.430000e-10 76.8
55 TraesCS2B01G219900 chr7B 97.778 90 2 0 2890 2979 45215273 45215184 4.280000e-34 156.0
56 TraesCS2B01G219900 chr7B 90.909 66 5 1 501 565 747368199 747368134 1.580000e-13 87.9
57 TraesCS2B01G219900 chr1B 90.909 99 6 2 562 657 345303721 345303819 2.600000e-26 130.0
58 TraesCS2B01G219900 chr1A 90.909 99 5 3 562 656 209495016 209495114 2.600000e-26 130.0
59 TraesCS2B01G219900 chr1A 94.828 58 2 1 2976 3032 516165937 516165994 4.410000e-14 89.8
60 TraesCS2B01G219900 chr5B 94.828 58 3 0 2979 3036 549633409 549633352 1.220000e-14 91.6
61 TraesCS2B01G219900 chr4B 90.476 63 3 3 504 565 617405531 617405471 2.650000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G219900 chr2B 210456038 210459243 3205 False 5921 5921 100.0000 1 3206 1 chr2B.!!$F1 3205
1 TraesCS2B01G219900 chr2A 149208273 149210539 2266 True 1636 2499 93.1295 2 2438 2 chr2A.!!$R2 2436
2 TraesCS2B01G219900 chr2D 152096667 152099174 2507 False 1252 1810 94.9690 103 2664 3 chr2D.!!$F2 2561

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
798 811 0.25064 CTGGGCAGTCAAGAACAGCT 60.251 55.0 0.0 0.0 40.1 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2358 2482 1.248486 TGAGACTTGAGACCTCCACG 58.752 55.0 0.0 0.0 0.0 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
258 263 5.396484 CATGTTGTCCTATTTGCTCTGTTG 58.604 41.667 0.00 0.00 0.00 3.33
370 375 6.876789 TGTACCATGTGTTGTATTTAGTCTGG 59.123 38.462 0.00 0.00 0.00 3.86
380 388 8.402472 TGTTGTATTTAGTCTGGAAAAAGTGTG 58.598 33.333 0.00 0.00 0.00 3.82
381 389 8.403236 GTTGTATTTAGTCTGGAAAAAGTGTGT 58.597 33.333 0.00 0.00 0.00 3.72
384 392 1.940613 AGTCTGGAAAAAGTGTGTCGC 59.059 47.619 0.00 0.00 0.00 5.19
386 394 0.934496 CTGGAAAAAGTGTGTCGCGA 59.066 50.000 3.71 3.71 0.00 5.87
387 395 0.934496 TGGAAAAAGTGTGTCGCGAG 59.066 50.000 10.24 0.00 0.00 5.03
388 396 0.935196 GGAAAAAGTGTGTCGCGAGT 59.065 50.000 10.24 0.00 0.00 4.18
389 397 1.332904 GGAAAAAGTGTGTCGCGAGTG 60.333 52.381 10.24 0.00 0.00 3.51
417 425 1.134946 CGAATGGAAAATGGGACTGGC 59.865 52.381 0.00 0.00 0.00 4.85
476 488 3.072915 TCCAGCTTCCTGTCATGAAAGAA 59.927 43.478 14.93 8.56 37.38 2.52
510 522 5.122396 CACAACTTCTGGGCTTGTAAGATAC 59.878 44.000 0.00 0.00 0.00 2.24
511 523 5.013183 ACAACTTCTGGGCTTGTAAGATACT 59.987 40.000 0.00 0.00 0.00 2.12
512 524 5.763876 ACTTCTGGGCTTGTAAGATACTT 57.236 39.130 0.00 0.00 0.00 2.24
513 525 5.735766 ACTTCTGGGCTTGTAAGATACTTC 58.264 41.667 0.00 0.00 0.00 3.01
514 526 4.755266 TCTGGGCTTGTAAGATACTTCC 57.245 45.455 0.00 0.00 0.00 3.46
515 527 4.362677 TCTGGGCTTGTAAGATACTTCCT 58.637 43.478 0.00 0.00 0.00 3.36
516 528 4.406003 TCTGGGCTTGTAAGATACTTCCTC 59.594 45.833 0.00 0.00 0.00 3.71
517 529 3.454812 TGGGCTTGTAAGATACTTCCTCC 59.545 47.826 0.00 0.00 0.00 4.30
518 530 3.492829 GGGCTTGTAAGATACTTCCTCCG 60.493 52.174 0.00 0.00 0.00 4.63
519 531 3.132467 GGCTTGTAAGATACTTCCTCCGT 59.868 47.826 0.00 0.00 0.00 4.69
520 532 4.382793 GGCTTGTAAGATACTTCCTCCGTT 60.383 45.833 0.00 0.00 0.00 4.44
521 533 5.176592 GCTTGTAAGATACTTCCTCCGTTT 58.823 41.667 0.00 0.00 0.00 3.60
522 534 5.291371 GCTTGTAAGATACTTCCTCCGTTTC 59.709 44.000 0.00 0.00 0.00 2.78
523 535 6.600882 TTGTAAGATACTTCCTCCGTTTCT 57.399 37.500 0.00 0.00 0.00 2.52
524 536 7.630082 GCTTGTAAGATACTTCCTCCGTTTCTA 60.630 40.741 0.00 0.00 0.00 2.10
525 537 7.707624 TGTAAGATACTTCCTCCGTTTCTAA 57.292 36.000 0.00 0.00 0.00 2.10
526 538 8.125978 TGTAAGATACTTCCTCCGTTTCTAAA 57.874 34.615 0.00 0.00 0.00 1.85
527 539 8.755977 TGTAAGATACTTCCTCCGTTTCTAAAT 58.244 33.333 0.00 0.00 0.00 1.40
535 547 8.979534 ACTTCCTCCGTTTCTAAATATAAGTCT 58.020 33.333 0.00 0.00 0.00 3.24
536 548 9.819267 CTTCCTCCGTTTCTAAATATAAGTCTT 57.181 33.333 0.00 0.00 0.00 3.01
576 588 8.558973 AAGAGACTACACACTATAAACTACGT 57.441 34.615 0.00 0.00 0.00 3.57
577 589 8.195617 AGAGACTACACACTATAAACTACGTC 57.804 38.462 0.00 0.00 0.00 4.34
578 590 8.040132 AGAGACTACACACTATAAACTACGTCT 58.960 37.037 0.00 0.00 0.00 4.18
579 591 9.307121 GAGACTACACACTATAAACTACGTCTA 57.693 37.037 0.00 0.00 0.00 2.59
580 592 9.829507 AGACTACACACTATAAACTACGTCTAT 57.170 33.333 0.00 0.00 0.00 1.98
605 617 5.723672 ACATTCGTATGTAGTCCATAGGG 57.276 43.478 5.81 0.00 43.12 3.53
606 618 5.391256 ACATTCGTATGTAGTCCATAGGGA 58.609 41.667 5.81 0.00 43.12 4.20
607 619 5.836898 ACATTCGTATGTAGTCCATAGGGAA 59.163 40.000 5.81 0.00 43.40 3.97
608 620 6.325545 ACATTCGTATGTAGTCCATAGGGAAA 59.674 38.462 5.81 0.00 43.40 3.13
609 621 7.016268 ACATTCGTATGTAGTCCATAGGGAAAT 59.984 37.037 5.81 0.00 43.40 2.17
621 633 7.604657 TCCATAGGGAAATCTCTAGAAAGAC 57.395 40.000 0.00 0.00 41.32 3.01
622 634 7.366226 TCCATAGGGAAATCTCTAGAAAGACT 58.634 38.462 0.00 0.00 41.32 3.24
623 635 7.846823 TCCATAGGGAAATCTCTAGAAAGACTT 59.153 37.037 0.00 0.00 41.32 3.01
624 636 7.930865 CCATAGGGAAATCTCTAGAAAGACTTG 59.069 40.741 0.00 0.00 35.59 3.16
625 637 6.943899 AGGGAAATCTCTAGAAAGACTTGT 57.056 37.500 0.00 0.00 0.00 3.16
626 638 9.716556 ATAGGGAAATCTCTAGAAAGACTTGTA 57.283 33.333 0.00 0.00 0.00 2.41
627 639 8.616799 AGGGAAATCTCTAGAAAGACTTGTAT 57.383 34.615 0.00 0.00 0.00 2.29
628 640 9.052365 AGGGAAATCTCTAGAAAGACTTGTATT 57.948 33.333 0.00 0.00 0.00 1.89
629 641 9.674068 GGGAAATCTCTAGAAAGACTTGTATTT 57.326 33.333 0.00 0.00 0.00 1.40
638 650 9.372369 CTAGAAAGACTTGTATTTAGGAACAGG 57.628 37.037 0.00 0.00 0.00 4.00
639 651 7.168905 AGAAAGACTTGTATTTAGGAACAGGG 58.831 38.462 0.00 0.00 0.00 4.45
640 652 6.697641 AAGACTTGTATTTAGGAACAGGGA 57.302 37.500 0.00 0.00 0.00 4.20
641 653 6.301169 AGACTTGTATTTAGGAACAGGGAG 57.699 41.667 0.00 0.00 0.00 4.30
642 654 5.785940 AGACTTGTATTTAGGAACAGGGAGT 59.214 40.000 0.00 0.00 0.00 3.85
643 655 6.958192 AGACTTGTATTTAGGAACAGGGAGTA 59.042 38.462 0.00 0.00 0.00 2.59
660 672 6.006449 AGGGAGTATATTTCATGCATGAACC 58.994 40.000 35.75 29.36 45.63 3.62
727 739 8.946085 GCATCCGGTATCATAATTTGATCTTTA 58.054 33.333 0.00 0.00 44.13 1.85
789 802 1.185618 AGTAAGACGCTGGGCAGTCA 61.186 55.000 13.40 0.00 35.68 3.41
798 811 0.250640 CTGGGCAGTCAAGAACAGCT 60.251 55.000 0.00 0.00 40.10 4.24
947 967 4.040952 AGTGCTCCTCATCGCCTATATTTT 59.959 41.667 0.00 0.00 0.00 1.82
952 972 3.679980 CCTCATCGCCTATATTTTGACGG 59.320 47.826 0.00 0.00 0.00 4.79
1449 1469 4.135153 AGCTTCGACTGGCGCGAT 62.135 61.111 12.10 0.00 40.61 4.58
1626 1732 6.103997 GTGGCATCATCAACTCAATTCAATT 58.896 36.000 0.00 0.00 0.00 2.32
1627 1733 6.255020 GTGGCATCATCAACTCAATTCAATTC 59.745 38.462 0.00 0.00 0.00 2.17
1628 1734 6.071278 TGGCATCATCAACTCAATTCAATTCA 60.071 34.615 0.00 0.00 0.00 2.57
1629 1735 6.814644 GGCATCATCAACTCAATTCAATTCAA 59.185 34.615 0.00 0.00 0.00 2.69
1630 1736 7.494625 GGCATCATCAACTCAATTCAATTCAAT 59.505 33.333 0.00 0.00 0.00 2.57
1631 1737 8.879759 GCATCATCAACTCAATTCAATTCAATT 58.120 29.630 0.00 0.00 0.00 2.32
1667 1778 8.837788 TTCATATGCTTACATAATCTGACTGG 57.162 34.615 0.00 0.00 41.99 4.00
1670 1781 4.769688 TGCTTACATAATCTGACTGGTGG 58.230 43.478 0.00 0.00 0.00 4.61
1686 1797 1.523758 GTGGTCTGCTCGTGGAAATT 58.476 50.000 0.00 0.00 0.00 1.82
2110 2221 0.613260 CATCAAGAACTCGTGGGGGA 59.387 55.000 0.00 0.00 0.00 4.81
2111 2222 0.613777 ATCAAGAACTCGTGGGGGAC 59.386 55.000 0.00 0.00 0.00 4.46
2263 2377 4.322804 CACGTAGTTGTTCGTTAGCCTAAG 59.677 45.833 0.00 0.00 41.61 2.18
2358 2482 0.250513 ACGTTCTCTCTTGGATGCCC 59.749 55.000 0.00 0.00 0.00 5.36
2524 2650 1.069204 GGAGATGCGCACCTATCTTCA 59.931 52.381 14.90 0.00 33.97 3.02
2532 2658 3.589988 CGCACCTATCTTCAGAACTTGT 58.410 45.455 0.00 0.00 0.00 3.16
2540 2666 7.182930 ACCTATCTTCAGAACTTGTAGGGATTT 59.817 37.037 5.72 0.00 33.26 2.17
2563 2689 0.895530 ATTCGATGGACTGGTCGTGT 59.104 50.000 0.00 0.00 38.85 4.49
2564 2690 0.038618 TTCGATGGACTGGTCGTGTG 60.039 55.000 0.00 0.00 38.85 3.82
2565 2691 2.094659 CGATGGACTGGTCGTGTGC 61.095 63.158 0.00 0.00 33.42 4.57
2566 2692 1.293498 GATGGACTGGTCGTGTGCT 59.707 57.895 0.00 0.00 0.00 4.40
2567 2693 1.004560 ATGGACTGGTCGTGTGCTG 60.005 57.895 0.00 0.00 0.00 4.41
2568 2694 3.044305 GGACTGGTCGTGTGCTGC 61.044 66.667 0.00 0.00 0.00 5.25
2569 2695 3.044305 GACTGGTCGTGTGCTGCC 61.044 66.667 0.00 0.00 0.00 4.85
2571 2697 4.624364 CTGGTCGTGTGCTGCCCA 62.624 66.667 0.00 0.00 0.00 5.36
2573 2699 2.267642 GGTCGTGTGCTGCCCATA 59.732 61.111 0.00 0.00 0.00 2.74
2574 2700 2.106683 GGTCGTGTGCTGCCCATAC 61.107 63.158 0.00 0.00 32.75 2.39
2575 2701 1.079127 GTCGTGTGCTGCCCATACT 60.079 57.895 0.00 0.00 33.81 2.12
2578 2704 0.955428 CGTGTGCTGCCCATACTTGT 60.955 55.000 0.00 0.00 33.81 3.16
2579 2705 0.523072 GTGTGCTGCCCATACTTGTG 59.477 55.000 0.00 0.00 33.27 3.33
2580 2706 1.243342 TGTGCTGCCCATACTTGTGC 61.243 55.000 0.00 0.00 0.00 4.57
2581 2707 1.678635 TGCTGCCCATACTTGTGCC 60.679 57.895 0.00 0.00 0.00 5.01
2583 2709 1.250154 GCTGCCCATACTTGTGCCAA 61.250 55.000 0.00 0.00 0.00 4.52
2586 2712 1.202989 TGCCCATACTTGTGCCAAAGA 60.203 47.619 2.72 0.00 0.00 2.52
2587 2713 2.102578 GCCCATACTTGTGCCAAAGAT 58.897 47.619 2.72 0.00 0.00 2.40
2601 2727 4.361451 CCAAAGATTCTTTGGTGATCCG 57.639 45.455 35.17 17.70 42.92 4.18
2609 2735 2.301870 TCTTTGGTGATCCGCACTAGTT 59.698 45.455 0.00 0.00 46.86 2.24
2664 2790 5.700832 TGGTTGACATTGTACAATCAGACTC 59.299 40.000 18.25 8.48 33.13 3.36
2665 2791 5.163953 GGTTGACATTGTACAATCAGACTCG 60.164 44.000 18.25 8.05 0.00 4.18
2666 2792 4.494484 TGACATTGTACAATCAGACTCGG 58.506 43.478 18.25 7.35 0.00 4.63
2667 2793 4.219725 TGACATTGTACAATCAGACTCGGA 59.780 41.667 18.25 0.00 0.00 4.55
2668 2794 4.748892 ACATTGTACAATCAGACTCGGAG 58.251 43.478 18.25 2.83 0.00 4.63
2669 2795 2.941453 TGTACAATCAGACTCGGAGC 57.059 50.000 4.58 0.00 0.00 4.70
2670 2796 2.167662 TGTACAATCAGACTCGGAGCA 58.832 47.619 4.58 0.00 0.00 4.26
2671 2797 2.760650 TGTACAATCAGACTCGGAGCAT 59.239 45.455 4.58 0.00 0.00 3.79
2672 2798 2.593346 ACAATCAGACTCGGAGCATC 57.407 50.000 4.58 0.00 0.00 3.91
2673 2799 2.106566 ACAATCAGACTCGGAGCATCT 58.893 47.619 4.58 0.00 33.73 2.90
2674 2800 2.100584 ACAATCAGACTCGGAGCATCTC 59.899 50.000 4.58 0.00 33.73 2.75
2675 2801 1.327303 ATCAGACTCGGAGCATCTCC 58.673 55.000 4.58 2.83 46.44 3.71
2683 2809 3.805267 GAGCATCTCCAACAGCCG 58.195 61.111 0.00 0.00 0.00 5.52
2684 2810 2.437359 AGCATCTCCAACAGCCGC 60.437 61.111 0.00 0.00 0.00 6.53
2685 2811 3.512516 GCATCTCCAACAGCCGCC 61.513 66.667 0.00 0.00 0.00 6.13
2686 2812 2.825836 CATCTCCAACAGCCGCCC 60.826 66.667 0.00 0.00 0.00 6.13
2687 2813 3.329889 ATCTCCAACAGCCGCCCA 61.330 61.111 0.00 0.00 0.00 5.36
2688 2814 2.905996 ATCTCCAACAGCCGCCCAA 61.906 57.895 0.00 0.00 0.00 4.12
2689 2815 3.365265 CTCCAACAGCCGCCCAAC 61.365 66.667 0.00 0.00 0.00 3.77
2741 2867 3.736100 CAAATGCAGCGCGTGGGA 61.736 61.111 8.43 1.08 0.00 4.37
2742 2868 3.737172 AAATGCAGCGCGTGGGAC 61.737 61.111 8.43 0.00 0.00 4.46
2743 2869 4.704833 AATGCAGCGCGTGGGACT 62.705 61.111 8.43 0.00 0.00 3.85
2769 2895 2.883574 GCGCATGCCATATATTGCATT 58.116 42.857 18.95 5.11 45.52 3.56
2770 2896 3.255725 GCGCATGCCATATATTGCATTT 58.744 40.909 18.95 0.87 45.52 2.32
2771 2897 3.680937 GCGCATGCCATATATTGCATTTT 59.319 39.130 18.95 0.20 45.52 1.82
2772 2898 4.434989 GCGCATGCCATATATTGCATTTTG 60.435 41.667 18.95 12.36 45.52 2.44
2773 2899 4.092237 CGCATGCCATATATTGCATTTTGG 59.908 41.667 18.95 10.72 45.52 3.28
2774 2900 5.239351 GCATGCCATATATTGCATTTTGGA 58.761 37.500 18.95 0.00 45.52 3.53
2775 2901 5.121142 GCATGCCATATATTGCATTTTGGAC 59.879 40.000 18.95 4.48 45.52 4.02
2776 2902 5.866159 TGCCATATATTGCATTTTGGACA 57.134 34.783 7.37 0.00 31.31 4.02
2777 2903 5.599732 TGCCATATATTGCATTTTGGACAC 58.400 37.500 7.37 0.00 31.31 3.67
2778 2904 5.128335 TGCCATATATTGCATTTTGGACACA 59.872 36.000 7.37 0.00 31.31 3.72
2779 2905 6.047870 GCCATATATTGCATTTTGGACACAA 58.952 36.000 3.97 0.00 34.07 3.33
2780 2906 6.538021 GCCATATATTGCATTTTGGACACAAA 59.462 34.615 3.97 0.00 44.40 2.83
2794 2920 7.912056 TTGGACACAAAATGAATTTCAAACA 57.088 28.000 2.68 0.00 32.66 2.83
2795 2921 8.503458 TTGGACACAAAATGAATTTCAAACAT 57.497 26.923 2.68 0.00 32.66 2.71
2796 2922 8.503458 TGGACACAAAATGAATTTCAAACATT 57.497 26.923 2.68 0.00 36.07 2.71
2797 2923 8.610896 TGGACACAAAATGAATTTCAAACATTC 58.389 29.630 2.68 0.00 33.90 2.67
2798 2924 8.610896 GGACACAAAATGAATTTCAAACATTCA 58.389 29.630 2.68 0.00 43.23 2.57
2799 2925 9.985318 GACACAAAATGAATTTCAAACATTCAA 57.015 25.926 2.68 0.00 42.53 2.69
2808 2934 9.452065 TGAATTTCAAACATTCAAAATGCAATG 57.548 25.926 0.00 0.00 37.64 2.82
2809 2935 9.666626 GAATTTCAAACATTCAAAATGCAATGA 57.333 25.926 0.00 0.00 34.60 2.57
2811 2937 8.838452 TTTCAAACATTCAAAATGCAATGAAC 57.162 26.923 13.17 0.00 38.29 3.18
2812 2938 7.549615 TCAAACATTCAAAATGCAATGAACA 57.450 28.000 13.17 0.00 38.29 3.18
2813 2939 8.155821 TCAAACATTCAAAATGCAATGAACAT 57.844 26.923 13.17 4.46 38.29 2.71
2814 2940 8.070769 TCAAACATTCAAAATGCAATGAACATG 58.929 29.630 13.17 11.46 38.29 3.21
2815 2941 6.489127 ACATTCAAAATGCAATGAACATGG 57.511 33.333 13.17 7.73 38.29 3.66
2816 2942 5.106475 ACATTCAAAATGCAATGAACATGGC 60.106 36.000 13.17 7.17 38.29 4.40
2827 2953 8.367943 TGCAATGAACATGGCATATAAATTTC 57.632 30.769 12.15 0.00 42.48 2.17
2828 2954 7.985752 TGCAATGAACATGGCATATAAATTTCA 59.014 29.630 12.15 3.30 42.48 2.69
2829 2955 8.277713 GCAATGAACATGGCATATAAATTTCAC 58.722 33.333 9.02 0.00 37.68 3.18
2830 2956 9.315525 CAATGAACATGGCATATAAATTTCACA 57.684 29.630 0.00 0.00 0.00 3.58
2839 2965 9.814899 TGGCATATAAATTTCACATAAACAAGG 57.185 29.630 0.00 0.00 0.00 3.61
2846 2972 8.907222 AAATTTCACATAAACAAGGAAGCATT 57.093 26.923 0.00 0.00 0.00 3.56
2847 2973 7.894376 ATTTCACATAAACAAGGAAGCATTG 57.106 32.000 0.00 0.00 0.00 2.82
2848 2974 5.389859 TCACATAAACAAGGAAGCATTGG 57.610 39.130 0.00 0.00 31.76 3.16
2849 2975 4.832266 TCACATAAACAAGGAAGCATTGGT 59.168 37.500 0.00 0.00 31.76 3.67
2850 2976 5.304101 TCACATAAACAAGGAAGCATTGGTT 59.696 36.000 0.00 0.00 40.54 3.67
2851 2977 5.990996 CACATAAACAAGGAAGCATTGGTTT 59.009 36.000 2.14 0.00 38.48 3.27
2852 2978 7.014711 TCACATAAACAAGGAAGCATTGGTTTA 59.985 33.333 2.14 0.00 38.48 2.01
2853 2979 7.818930 CACATAAACAAGGAAGCATTGGTTTAT 59.181 33.333 2.14 0.00 38.48 1.40
2854 2980 9.030452 ACATAAACAAGGAAGCATTGGTTTATA 57.970 29.630 2.14 0.00 38.48 0.98
2855 2981 9.301153 CATAAACAAGGAAGCATTGGTTTATAC 57.699 33.333 2.14 0.00 38.48 1.47
2856 2982 5.560966 ACAAGGAAGCATTGGTTTATACG 57.439 39.130 2.14 0.00 31.76 3.06
2857 2983 5.007682 ACAAGGAAGCATTGGTTTATACGT 58.992 37.500 2.14 0.00 31.76 3.57
2858 2984 5.475564 ACAAGGAAGCATTGGTTTATACGTT 59.524 36.000 2.14 0.00 31.76 3.99
2859 2985 5.813080 AGGAAGCATTGGTTTATACGTTC 57.187 39.130 2.14 0.00 0.00 3.95
2860 2986 4.638865 AGGAAGCATTGGTTTATACGTTCC 59.361 41.667 2.14 0.00 32.67 3.62
2861 2987 4.638865 GGAAGCATTGGTTTATACGTTCCT 59.361 41.667 2.14 0.00 0.00 3.36
2862 2988 5.124936 GGAAGCATTGGTTTATACGTTCCTT 59.875 40.000 2.14 0.00 0.00 3.36
2863 2989 6.349860 GGAAGCATTGGTTTATACGTTCCTTT 60.350 38.462 2.14 0.00 0.00 3.11
2864 2990 6.584185 AGCATTGGTTTATACGTTCCTTTT 57.416 33.333 0.00 0.00 0.00 2.27
2865 2991 7.690952 AGCATTGGTTTATACGTTCCTTTTA 57.309 32.000 0.00 0.00 0.00 1.52
2866 2992 7.758495 AGCATTGGTTTATACGTTCCTTTTAG 58.242 34.615 0.00 0.00 0.00 1.85
2867 2993 7.392393 AGCATTGGTTTATACGTTCCTTTTAGT 59.608 33.333 0.00 0.00 0.00 2.24
2868 2994 8.024865 GCATTGGTTTATACGTTCCTTTTAGTT 58.975 33.333 0.00 0.00 0.00 2.24
2869 2995 9.902196 CATTGGTTTATACGTTCCTTTTAGTTT 57.098 29.630 0.00 0.00 0.00 2.66
2871 2997 7.795859 TGGTTTATACGTTCCTTTTAGTTTCG 58.204 34.615 0.00 0.00 0.00 3.46
2872 2998 7.655328 TGGTTTATACGTTCCTTTTAGTTTCGA 59.345 33.333 0.00 0.00 0.00 3.71
2873 2999 7.952101 GGTTTATACGTTCCTTTTAGTTTCGAC 59.048 37.037 0.00 0.00 0.00 4.20
2874 3000 8.703336 GTTTATACGTTCCTTTTAGTTTCGACT 58.297 33.333 0.00 0.00 0.00 4.18
2875 3001 8.816640 TTATACGTTCCTTTTAGTTTCGACTT 57.183 30.769 0.00 0.00 0.00 3.01
2876 3002 7.719778 ATACGTTCCTTTTAGTTTCGACTTT 57.280 32.000 0.00 0.00 0.00 2.66
2877 3003 8.816640 ATACGTTCCTTTTAGTTTCGACTTTA 57.183 30.769 0.00 0.00 0.00 1.85
2878 3004 7.170240 ACGTTCCTTTTAGTTTCGACTTTAG 57.830 36.000 0.00 0.00 0.00 1.85
2879 3005 6.201615 ACGTTCCTTTTAGTTTCGACTTTAGG 59.798 38.462 0.00 0.00 0.00 2.69
2880 3006 6.347160 CGTTCCTTTTAGTTTCGACTTTAGGG 60.347 42.308 0.00 0.00 0.00 3.53
2881 3007 6.423776 TCCTTTTAGTTTCGACTTTAGGGA 57.576 37.500 0.00 0.00 0.00 4.20
2882 3008 7.012661 TCCTTTTAGTTTCGACTTTAGGGAT 57.987 36.000 0.00 0.00 0.00 3.85
2883 3009 8.137745 TCCTTTTAGTTTCGACTTTAGGGATA 57.862 34.615 0.00 0.00 0.00 2.59
2884 3010 8.596293 TCCTTTTAGTTTCGACTTTAGGGATAA 58.404 33.333 0.00 0.00 0.00 1.75
2885 3011 9.392259 CCTTTTAGTTTCGACTTTAGGGATAAT 57.608 33.333 0.00 0.00 0.00 1.28
2912 3038 7.500720 TTTCCTTTTAGTTTCGACTTTAGGG 57.499 36.000 0.00 0.00 0.00 3.53
2913 3039 6.423776 TCCTTTTAGTTTCGACTTTAGGGA 57.576 37.500 0.00 0.00 0.00 4.20
2914 3040 7.012661 TCCTTTTAGTTTCGACTTTAGGGAT 57.987 36.000 0.00 0.00 0.00 3.85
2915 3041 8.137745 TCCTTTTAGTTTCGACTTTAGGGATA 57.862 34.615 0.00 0.00 0.00 2.59
2916 3042 8.596293 TCCTTTTAGTTTCGACTTTAGGGATAA 58.404 33.333 0.00 0.00 0.00 1.75
2917 3043 9.392259 CCTTTTAGTTTCGACTTTAGGGATAAT 57.608 33.333 0.00 0.00 0.00 1.28
2939 3065 3.880047 TTTTCCGCTATCTTCTTCCGA 57.120 42.857 0.00 0.00 0.00 4.55
2940 3066 3.438297 TTTCCGCTATCTTCTTCCGAG 57.562 47.619 0.00 0.00 0.00 4.63
2941 3067 2.343484 TCCGCTATCTTCTTCCGAGA 57.657 50.000 0.00 0.00 0.00 4.04
2942 3068 2.651455 TCCGCTATCTTCTTCCGAGAA 58.349 47.619 0.00 0.00 39.54 2.87
2943 3069 2.358267 TCCGCTATCTTCTTCCGAGAAC 59.642 50.000 0.00 0.00 36.99 3.01
2944 3070 2.544069 CCGCTATCTTCTTCCGAGAACC 60.544 54.545 0.00 0.00 36.99 3.62
2945 3071 2.099263 CGCTATCTTCTTCCGAGAACCA 59.901 50.000 0.00 0.00 36.99 3.67
2946 3072 3.449632 GCTATCTTCTTCCGAGAACCAC 58.550 50.000 0.00 0.00 36.99 4.16
2947 3073 3.738590 GCTATCTTCTTCCGAGAACCACC 60.739 52.174 0.00 0.00 36.99 4.61
2948 3074 2.011122 TCTTCTTCCGAGAACCACCT 57.989 50.000 0.00 0.00 36.99 4.00
2949 3075 3.165087 TCTTCTTCCGAGAACCACCTA 57.835 47.619 0.00 0.00 36.99 3.08
2950 3076 3.503365 TCTTCTTCCGAGAACCACCTAA 58.497 45.455 0.00 0.00 36.99 2.69
2951 3077 3.510360 TCTTCTTCCGAGAACCACCTAAG 59.490 47.826 0.00 0.00 36.99 2.18
2952 3078 2.176889 TCTTCCGAGAACCACCTAAGG 58.823 52.381 0.00 0.00 0.00 2.69
2953 3079 1.900486 CTTCCGAGAACCACCTAAGGT 59.100 52.381 0.00 0.00 45.91 3.50
2960 3086 3.152662 ACCACCTAAGGTTCCACGA 57.847 52.632 0.00 0.00 39.34 4.35
2961 3087 1.426751 ACCACCTAAGGTTCCACGAA 58.573 50.000 0.00 0.00 39.34 3.85
2962 3088 1.071228 ACCACCTAAGGTTCCACGAAC 59.929 52.381 0.00 0.00 39.34 3.95
2963 3089 1.346722 CCACCTAAGGTTCCACGAACT 59.653 52.381 4.65 0.00 41.70 3.01
2964 3090 2.612221 CCACCTAAGGTTCCACGAACTC 60.612 54.545 4.65 0.00 41.70 3.01
2965 3091 1.622312 ACCTAAGGTTCCACGAACTCC 59.378 52.381 4.65 0.00 41.70 3.85
2966 3092 1.621814 CCTAAGGTTCCACGAACTCCA 59.378 52.381 4.65 0.00 41.70 3.86
2967 3093 2.038033 CCTAAGGTTCCACGAACTCCAA 59.962 50.000 4.65 0.00 41.70 3.53
2968 3094 1.963172 AAGGTTCCACGAACTCCAAC 58.037 50.000 4.65 0.00 41.70 3.77
2969 3095 1.129058 AGGTTCCACGAACTCCAACT 58.871 50.000 4.65 0.00 41.70 3.16
2970 3096 2.322658 AGGTTCCACGAACTCCAACTA 58.677 47.619 4.65 0.00 41.70 2.24
2971 3097 2.701951 AGGTTCCACGAACTCCAACTAA 59.298 45.455 4.65 0.00 41.70 2.24
2972 3098 3.135167 AGGTTCCACGAACTCCAACTAAA 59.865 43.478 4.65 0.00 41.70 1.85
2973 3099 3.878699 GGTTCCACGAACTCCAACTAAAA 59.121 43.478 4.65 0.00 41.70 1.52
2974 3100 4.024302 GGTTCCACGAACTCCAACTAAAAG 60.024 45.833 4.65 0.00 41.70 2.27
2975 3101 4.675976 TCCACGAACTCCAACTAAAAGA 57.324 40.909 0.00 0.00 0.00 2.52
2976 3102 5.026038 TCCACGAACTCCAACTAAAAGAA 57.974 39.130 0.00 0.00 0.00 2.52
2977 3103 5.617252 TCCACGAACTCCAACTAAAAGAAT 58.383 37.500 0.00 0.00 0.00 2.40
2978 3104 6.761312 TCCACGAACTCCAACTAAAAGAATA 58.239 36.000 0.00 0.00 0.00 1.75
2979 3105 6.872020 TCCACGAACTCCAACTAAAAGAATAG 59.128 38.462 0.00 0.00 0.00 1.73
2980 3106 6.649557 CCACGAACTCCAACTAAAAGAATAGT 59.350 38.462 0.00 0.00 37.73 2.12
2981 3107 7.172703 CCACGAACTCCAACTAAAAGAATAGTT 59.827 37.037 0.00 0.00 44.80 2.24
3001 3127 9.807649 AATAGTTGATGAATAAAAGTTCATGCC 57.192 29.630 6.84 0.00 46.02 4.40
3002 3128 6.633856 AGTTGATGAATAAAAGTTCATGCCC 58.366 36.000 6.84 0.00 46.02 5.36
3003 3129 6.211184 AGTTGATGAATAAAAGTTCATGCCCA 59.789 34.615 6.84 0.00 46.02 5.36
3004 3130 5.964758 TGATGAATAAAAGTTCATGCCCAC 58.035 37.500 6.84 0.00 46.02 4.61
3005 3131 5.479724 TGATGAATAAAAGTTCATGCCCACA 59.520 36.000 6.84 0.00 46.02 4.17
3006 3132 5.798125 TGAATAAAAGTTCATGCCCACAA 57.202 34.783 0.00 0.00 33.41 3.33
3007 3133 6.166984 TGAATAAAAGTTCATGCCCACAAA 57.833 33.333 0.00 0.00 33.41 2.83
3008 3134 6.767456 TGAATAAAAGTTCATGCCCACAAAT 58.233 32.000 0.00 0.00 33.41 2.32
3009 3135 7.222872 TGAATAAAAGTTCATGCCCACAAATT 58.777 30.769 0.00 0.00 33.41 1.82
3010 3136 7.718753 TGAATAAAAGTTCATGCCCACAAATTT 59.281 29.630 0.00 0.00 33.41 1.82
3011 3137 9.213799 GAATAAAAGTTCATGCCCACAAATTTA 57.786 29.630 0.00 0.00 0.00 1.40
3012 3138 9.566432 AATAAAAGTTCATGCCCACAAATTTAA 57.434 25.926 0.00 0.00 0.00 1.52
3013 3139 7.872113 AAAAGTTCATGCCCACAAATTTAAA 57.128 28.000 0.00 0.00 0.00 1.52
3014 3140 7.872113 AAAGTTCATGCCCACAAATTTAAAA 57.128 28.000 0.00 0.00 0.00 1.52
3015 3141 8.462589 AAAGTTCATGCCCACAAATTTAAAAT 57.537 26.923 0.00 0.00 0.00 1.82
3016 3142 7.671495 AGTTCATGCCCACAAATTTAAAATC 57.329 32.000 0.00 0.00 0.00 2.17
3017 3143 7.222872 AGTTCATGCCCACAAATTTAAAATCA 58.777 30.769 0.00 0.00 0.00 2.57
3018 3144 7.884354 AGTTCATGCCCACAAATTTAAAATCAT 59.116 29.630 0.00 0.00 0.00 2.45
3019 3145 7.612668 TCATGCCCACAAATTTAAAATCATG 57.387 32.000 12.12 12.12 0.00 3.07
3020 3146 5.876612 TGCCCACAAATTTAAAATCATGC 57.123 34.783 0.00 0.00 0.00 4.06
3021 3147 4.699257 TGCCCACAAATTTAAAATCATGCC 59.301 37.500 0.00 0.00 0.00 4.40
3022 3148 4.096231 GCCCACAAATTTAAAATCATGCCC 59.904 41.667 0.00 0.00 0.00 5.36
3023 3149 5.251764 CCCACAAATTTAAAATCATGCCCA 58.748 37.500 0.00 0.00 0.00 5.36
3024 3150 5.123661 CCCACAAATTTAAAATCATGCCCAC 59.876 40.000 0.00 0.00 0.00 4.61
3025 3151 5.704515 CCACAAATTTAAAATCATGCCCACA 59.295 36.000 0.00 0.00 0.00 4.17
3026 3152 6.206243 CCACAAATTTAAAATCATGCCCACAA 59.794 34.615 0.00 0.00 0.00 3.33
3027 3153 7.299586 CACAAATTTAAAATCATGCCCACAAG 58.700 34.615 0.00 0.00 0.00 3.16
3028 3154 6.997476 ACAAATTTAAAATCATGCCCACAAGT 59.003 30.769 0.00 0.00 0.00 3.16
3029 3155 7.501892 ACAAATTTAAAATCATGCCCACAAGTT 59.498 29.630 0.00 0.00 0.00 2.66
3030 3156 8.351461 CAAATTTAAAATCATGCCCACAAGTTT 58.649 29.630 0.00 0.00 0.00 2.66
3031 3157 9.566432 AAATTTAAAATCATGCCCACAAGTTTA 57.434 25.926 0.00 0.00 0.00 2.01
3032 3158 9.566432 AATTTAAAATCATGCCCACAAGTTTAA 57.434 25.926 0.00 0.00 0.00 1.52
3033 3159 8.964476 TTTAAAATCATGCCCACAAGTTTAAA 57.036 26.923 4.71 4.71 0.00 1.52
3034 3160 8.964476 TTAAAATCATGCCCACAAGTTTAAAA 57.036 26.923 0.00 0.00 0.00 1.52
3035 3161 9.566432 TTAAAATCATGCCCACAAGTTTAAAAT 57.434 25.926 0.00 0.00 0.00 1.82
3036 3162 7.671495 AAATCATGCCCACAAGTTTAAAATC 57.329 32.000 0.00 0.00 0.00 2.17
3037 3163 5.798125 TCATGCCCACAAGTTTAAAATCA 57.202 34.783 0.00 0.00 0.00 2.57
3038 3164 6.357579 TCATGCCCACAAGTTTAAAATCAT 57.642 33.333 0.00 0.00 0.00 2.45
3039 3165 6.164876 TCATGCCCACAAGTTTAAAATCATG 58.835 36.000 6.47 6.47 0.00 3.07
3040 3166 4.314121 TGCCCACAAGTTTAAAATCATGC 58.686 39.130 0.00 0.00 0.00 4.06
3041 3167 4.040217 TGCCCACAAGTTTAAAATCATGCT 59.960 37.500 0.00 0.00 0.00 3.79
3042 3168 4.627035 GCCCACAAGTTTAAAATCATGCTC 59.373 41.667 0.00 0.00 0.00 4.26
3043 3169 5.782047 CCCACAAGTTTAAAATCATGCTCA 58.218 37.500 0.00 0.00 0.00 4.26
3044 3170 5.634859 CCCACAAGTTTAAAATCATGCTCAC 59.365 40.000 0.00 0.00 0.00 3.51
3045 3171 6.215121 CCACAAGTTTAAAATCATGCTCACA 58.785 36.000 0.00 0.00 0.00 3.58
3046 3172 6.700960 CCACAAGTTTAAAATCATGCTCACAA 59.299 34.615 0.00 0.00 0.00 3.33
3047 3173 7.095940 CCACAAGTTTAAAATCATGCTCACAAG 60.096 37.037 0.00 0.00 0.00 3.16
3048 3174 7.436080 CACAAGTTTAAAATCATGCTCACAAGT 59.564 33.333 0.00 0.00 0.00 3.16
3049 3175 7.981225 ACAAGTTTAAAATCATGCTCACAAGTT 59.019 29.630 0.00 0.00 0.00 2.66
3050 3176 8.819974 CAAGTTTAAAATCATGCTCACAAGTTT 58.180 29.630 0.00 0.00 0.00 2.66
3054 3180 9.638239 TTTAAAATCATGCTCACAAGTTTATCC 57.362 29.630 0.00 0.00 0.00 2.59
3055 3181 6.839124 AAATCATGCTCACAAGTTTATCCA 57.161 33.333 0.00 0.00 0.00 3.41
3056 3182 6.446781 AATCATGCTCACAAGTTTATCCAG 57.553 37.500 0.00 0.00 0.00 3.86
3057 3183 3.691118 TCATGCTCACAAGTTTATCCAGC 59.309 43.478 0.00 0.00 0.00 4.85
3058 3184 3.423539 TGCTCACAAGTTTATCCAGCT 57.576 42.857 0.00 0.00 0.00 4.24
3059 3185 4.551702 TGCTCACAAGTTTATCCAGCTA 57.448 40.909 0.00 0.00 0.00 3.32
3060 3186 4.905429 TGCTCACAAGTTTATCCAGCTAA 58.095 39.130 0.00 0.00 0.00 3.09
3061 3187 4.937620 TGCTCACAAGTTTATCCAGCTAAG 59.062 41.667 0.00 0.00 0.00 2.18
3062 3188 4.938226 GCTCACAAGTTTATCCAGCTAAGT 59.062 41.667 0.00 0.00 0.00 2.24
3063 3189 5.412904 GCTCACAAGTTTATCCAGCTAAGTT 59.587 40.000 0.00 0.00 0.00 2.66
3064 3190 6.402658 GCTCACAAGTTTATCCAGCTAAGTTC 60.403 42.308 0.00 0.00 0.00 3.01
3065 3191 6.530120 TCACAAGTTTATCCAGCTAAGTTCA 58.470 36.000 0.00 0.00 0.00 3.18
3066 3192 6.995686 TCACAAGTTTATCCAGCTAAGTTCAA 59.004 34.615 0.00 0.00 0.00 2.69
3067 3193 7.500892 TCACAAGTTTATCCAGCTAAGTTCAAA 59.499 33.333 0.00 0.00 0.00 2.69
3068 3194 8.134895 CACAAGTTTATCCAGCTAAGTTCAAAA 58.865 33.333 0.00 0.00 0.00 2.44
3069 3195 8.860088 ACAAGTTTATCCAGCTAAGTTCAAAAT 58.140 29.630 0.00 0.00 0.00 1.82
3070 3196 9.132521 CAAGTTTATCCAGCTAAGTTCAAAATG 57.867 33.333 0.00 0.00 0.00 2.32
3071 3197 7.315890 AGTTTATCCAGCTAAGTTCAAAATGC 58.684 34.615 0.00 0.00 0.00 3.56
3072 3198 6.832520 TTATCCAGCTAAGTTCAAAATGCA 57.167 33.333 0.00 0.00 0.00 3.96
3073 3199 5.726980 ATCCAGCTAAGTTCAAAATGCAA 57.273 34.783 0.00 0.00 0.00 4.08
3074 3200 5.528043 TCCAGCTAAGTTCAAAATGCAAA 57.472 34.783 0.00 0.00 0.00 3.68
3075 3201 5.288804 TCCAGCTAAGTTCAAAATGCAAAC 58.711 37.500 0.00 0.00 0.00 2.93
3076 3202 4.448732 CCAGCTAAGTTCAAAATGCAAACC 59.551 41.667 0.00 0.00 0.00 3.27
3077 3203 5.049167 CAGCTAAGTTCAAAATGCAAACCA 58.951 37.500 0.00 0.00 0.00 3.67
3078 3204 5.523188 CAGCTAAGTTCAAAATGCAAACCAA 59.477 36.000 0.00 0.00 0.00 3.67
3079 3205 5.754890 AGCTAAGTTCAAAATGCAAACCAAG 59.245 36.000 0.00 0.00 0.00 3.61
3080 3206 5.523552 GCTAAGTTCAAAATGCAAACCAAGT 59.476 36.000 0.00 0.00 0.00 3.16
3081 3207 6.037062 GCTAAGTTCAAAATGCAAACCAAGTT 59.963 34.615 0.00 0.00 0.00 2.66
3082 3208 6.421377 AAGTTCAAAATGCAAACCAAGTTC 57.579 33.333 0.00 0.00 0.00 3.01
3083 3209 5.486526 AGTTCAAAATGCAAACCAAGTTCA 58.513 33.333 0.00 0.00 0.00 3.18
3084 3210 6.114767 AGTTCAAAATGCAAACCAAGTTCAT 58.885 32.000 0.00 0.00 0.00 2.57
3085 3211 5.987777 TCAAAATGCAAACCAAGTTCATG 57.012 34.783 0.00 0.00 0.00 3.07
3086 3212 5.668471 TCAAAATGCAAACCAAGTTCATGA 58.332 33.333 0.00 0.00 0.00 3.07
3087 3213 6.289834 TCAAAATGCAAACCAAGTTCATGAT 58.710 32.000 0.00 0.00 0.00 2.45
3088 3214 7.440198 TCAAAATGCAAACCAAGTTCATGATA 58.560 30.769 0.00 0.00 0.00 2.15
3089 3215 7.384660 TCAAAATGCAAACCAAGTTCATGATAC 59.615 33.333 0.00 0.00 0.00 2.24
3090 3216 5.981088 ATGCAAACCAAGTTCATGATACA 57.019 34.783 0.00 0.00 0.00 2.29
3091 3217 5.781210 TGCAAACCAAGTTCATGATACAA 57.219 34.783 0.00 0.00 0.00 2.41
3092 3218 6.154203 TGCAAACCAAGTTCATGATACAAA 57.846 33.333 0.00 0.00 0.00 2.83
3093 3219 5.982516 TGCAAACCAAGTTCATGATACAAAC 59.017 36.000 0.00 0.00 0.00 2.93
3094 3220 5.116983 GCAAACCAAGTTCATGATACAAACG 59.883 40.000 0.00 0.00 0.00 3.60
3095 3221 6.434596 CAAACCAAGTTCATGATACAAACGA 58.565 36.000 0.00 0.00 0.00 3.85
3096 3222 6.627395 AACCAAGTTCATGATACAAACGAA 57.373 33.333 0.00 0.00 0.00 3.85
3097 3223 6.627395 ACCAAGTTCATGATACAAACGAAA 57.373 33.333 0.00 0.00 0.00 3.46
3098 3224 6.668323 ACCAAGTTCATGATACAAACGAAAG 58.332 36.000 0.00 0.00 0.00 2.62
3099 3225 6.485313 ACCAAGTTCATGATACAAACGAAAGA 59.515 34.615 0.00 0.00 0.00 2.52
3100 3226 6.797033 CCAAGTTCATGATACAAACGAAAGAC 59.203 38.462 0.00 0.00 0.00 3.01
3102 3228 4.577687 TCATGATACAAACGAAAGACGC 57.422 40.909 0.00 0.00 46.94 5.19
3103 3229 3.991121 TCATGATACAAACGAAAGACGCA 59.009 39.130 0.00 0.00 46.94 5.24
3104 3230 4.629634 TCATGATACAAACGAAAGACGCAT 59.370 37.500 0.00 0.00 46.94 4.73
3105 3231 5.121611 TCATGATACAAACGAAAGACGCATT 59.878 36.000 0.00 0.00 46.94 3.56
3106 3232 6.311690 TCATGATACAAACGAAAGACGCATTA 59.688 34.615 0.00 0.00 46.94 1.90
3107 3233 6.469139 TGATACAAACGAAAGACGCATTAA 57.531 33.333 0.00 0.00 46.94 1.40
3108 3234 6.530567 TGATACAAACGAAAGACGCATTAAG 58.469 36.000 0.00 0.00 46.94 1.85
3109 3235 3.551551 ACAAACGAAAGACGCATTAAGC 58.448 40.909 0.00 0.00 46.94 3.09
3110 3236 2.894307 AACGAAAGACGCATTAAGCC 57.106 45.000 0.00 0.00 46.94 4.35
3111 3237 2.094762 ACGAAAGACGCATTAAGCCT 57.905 45.000 0.00 0.00 46.94 4.58
3112 3238 2.000447 ACGAAAGACGCATTAAGCCTC 59.000 47.619 0.00 0.00 46.94 4.70
3113 3239 1.005975 CGAAAGACGCATTAAGCCTCG 60.006 52.381 0.00 0.00 41.38 4.63
3114 3240 2.000447 GAAAGACGCATTAAGCCTCGT 59.000 47.619 0.00 0.00 41.38 4.18
3116 3242 2.298593 GACGCATTAAGCCTCGTCC 58.701 57.895 2.61 0.00 43.67 4.79
3117 3243 0.179108 GACGCATTAAGCCTCGTCCT 60.179 55.000 2.61 0.00 43.67 3.85
3118 3244 0.249398 ACGCATTAAGCCTCGTCCTT 59.751 50.000 0.00 0.00 41.38 3.36
3119 3245 0.652592 CGCATTAAGCCTCGTCCTTG 59.347 55.000 0.00 0.00 41.38 3.61
3120 3246 1.739067 GCATTAAGCCTCGTCCTTGT 58.261 50.000 0.00 0.00 37.23 3.16
3121 3247 1.666189 GCATTAAGCCTCGTCCTTGTC 59.334 52.381 0.00 0.00 37.23 3.18
3122 3248 2.678190 GCATTAAGCCTCGTCCTTGTCT 60.678 50.000 0.00 0.00 37.23 3.41
3123 3249 3.600388 CATTAAGCCTCGTCCTTGTCTT 58.400 45.455 0.00 0.00 0.00 3.01
3124 3250 3.314541 TTAAGCCTCGTCCTTGTCTTC 57.685 47.619 0.00 0.00 0.00 2.87
3125 3251 0.038159 AAGCCTCGTCCTTGTCTTCG 60.038 55.000 0.00 0.00 0.00 3.79
3126 3252 1.179814 AGCCTCGTCCTTGTCTTCGT 61.180 55.000 0.00 0.00 0.00 3.85
3127 3253 0.319641 GCCTCGTCCTTGTCTTCGTT 60.320 55.000 0.00 0.00 0.00 3.85
3128 3254 1.699343 CCTCGTCCTTGTCTTCGTTC 58.301 55.000 0.00 0.00 0.00 3.95
3129 3255 1.269998 CCTCGTCCTTGTCTTCGTTCT 59.730 52.381 0.00 0.00 0.00 3.01
3130 3256 2.586900 CTCGTCCTTGTCTTCGTTCTC 58.413 52.381 0.00 0.00 0.00 2.87
3131 3257 1.951602 TCGTCCTTGTCTTCGTTCTCA 59.048 47.619 0.00 0.00 0.00 3.27
3132 3258 2.557056 TCGTCCTTGTCTTCGTTCTCAT 59.443 45.455 0.00 0.00 0.00 2.90
3133 3259 2.917971 CGTCCTTGTCTTCGTTCTCATC 59.082 50.000 0.00 0.00 0.00 2.92
3134 3260 3.366476 CGTCCTTGTCTTCGTTCTCATCT 60.366 47.826 0.00 0.00 0.00 2.90
3135 3261 4.561105 GTCCTTGTCTTCGTTCTCATCTT 58.439 43.478 0.00 0.00 0.00 2.40
3136 3262 4.991687 GTCCTTGTCTTCGTTCTCATCTTT 59.008 41.667 0.00 0.00 0.00 2.52
3137 3263 5.119434 GTCCTTGTCTTCGTTCTCATCTTTC 59.881 44.000 0.00 0.00 0.00 2.62
3138 3264 4.090642 CCTTGTCTTCGTTCTCATCTTTCG 59.909 45.833 0.00 0.00 0.00 3.46
3139 3265 4.499037 TGTCTTCGTTCTCATCTTTCGA 57.501 40.909 0.00 0.00 0.00 3.71
3140 3266 4.866921 TGTCTTCGTTCTCATCTTTCGAA 58.133 39.130 0.00 0.00 38.48 3.71
3141 3267 5.286438 TGTCTTCGTTCTCATCTTTCGAAA 58.714 37.500 10.71 10.71 39.39 3.46
3142 3268 5.751509 TGTCTTCGTTCTCATCTTTCGAAAA 59.248 36.000 12.41 3.81 39.39 2.29
3143 3269 6.065781 GTCTTCGTTCTCATCTTTCGAAAAC 58.934 40.000 12.41 4.41 39.39 2.43
3144 3270 4.624721 TCGTTCTCATCTTTCGAAAACG 57.375 40.909 18.18 18.18 39.32 3.60
3145 3271 4.292599 TCGTTCTCATCTTTCGAAAACGA 58.707 39.130 21.27 21.27 43.02 3.85
3146 3272 4.921515 TCGTTCTCATCTTTCGAAAACGAT 59.078 37.500 21.27 14.62 41.16 3.73
3147 3273 5.404366 TCGTTCTCATCTTTCGAAAACGATT 59.596 36.000 21.27 1.12 41.16 3.34
3148 3274 5.723951 CGTTCTCATCTTTCGAAAACGATTC 59.276 40.000 19.06 4.20 40.10 2.52
3149 3275 6.400091 CGTTCTCATCTTTCGAAAACGATTCT 60.400 38.462 19.06 0.00 40.10 2.40
3150 3276 7.291567 GTTCTCATCTTTCGAAAACGATTCTT 58.708 34.615 12.41 0.00 0.00 2.52
3151 3277 7.050281 TCTCATCTTTCGAAAACGATTCTTC 57.950 36.000 12.41 0.00 0.00 2.87
3152 3278 6.090898 TCTCATCTTTCGAAAACGATTCTTCC 59.909 38.462 12.41 0.00 0.00 3.46
3153 3279 5.932303 TCATCTTTCGAAAACGATTCTTCCT 59.068 36.000 12.41 0.00 0.00 3.36
3154 3280 5.840940 TCTTTCGAAAACGATTCTTCCTC 57.159 39.130 12.41 0.00 0.00 3.71
3155 3281 4.689345 TCTTTCGAAAACGATTCTTCCTCC 59.311 41.667 12.41 0.00 0.00 4.30
3156 3282 3.671008 TCGAAAACGATTCTTCCTCCA 57.329 42.857 0.00 0.00 0.00 3.86
3157 3283 3.323243 TCGAAAACGATTCTTCCTCCAC 58.677 45.455 0.00 0.00 0.00 4.02
3158 3284 2.415512 CGAAAACGATTCTTCCTCCACC 59.584 50.000 0.00 0.00 0.00 4.61
3159 3285 2.094762 AAACGATTCTTCCTCCACCG 57.905 50.000 0.00 0.00 0.00 4.94
3160 3286 1.263356 AACGATTCTTCCTCCACCGA 58.737 50.000 0.00 0.00 0.00 4.69
3161 3287 1.263356 ACGATTCTTCCTCCACCGAA 58.737 50.000 0.00 0.00 0.00 4.30
3162 3288 1.204941 ACGATTCTTCCTCCACCGAAG 59.795 52.381 0.00 0.00 38.47 3.79
3163 3289 1.476891 CGATTCTTCCTCCACCGAAGA 59.523 52.381 0.00 0.00 43.04 2.87
3164 3290 2.101582 CGATTCTTCCTCCACCGAAGAT 59.898 50.000 1.40 0.00 43.89 2.40
3165 3291 3.462021 GATTCTTCCTCCACCGAAGATG 58.538 50.000 1.40 0.00 43.89 2.90
3166 3292 2.231716 TCTTCCTCCACCGAAGATGA 57.768 50.000 0.00 0.00 40.57 2.92
3167 3293 2.752030 TCTTCCTCCACCGAAGATGAT 58.248 47.619 0.00 0.00 40.57 2.45
3168 3294 3.107601 TCTTCCTCCACCGAAGATGATT 58.892 45.455 0.00 0.00 40.57 2.57
3169 3295 3.133003 TCTTCCTCCACCGAAGATGATTC 59.867 47.826 0.00 0.00 40.57 2.52
3170 3296 2.752030 TCCTCCACCGAAGATGATTCT 58.248 47.619 0.00 0.00 0.00 2.40
3171 3297 3.107601 TCCTCCACCGAAGATGATTCTT 58.892 45.455 0.00 0.00 44.99 2.52
3182 3308 4.277788 AGATGATTCTTCCTCCTCCTCA 57.722 45.455 0.00 0.00 0.00 3.86
3183 3309 4.830138 AGATGATTCTTCCTCCTCCTCAT 58.170 43.478 0.00 0.00 0.00 2.90
3184 3310 4.840115 AGATGATTCTTCCTCCTCCTCATC 59.160 45.833 0.00 0.00 38.39 2.92
3185 3311 3.999603 TGATTCTTCCTCCTCCTCATCA 58.000 45.455 0.00 0.00 0.00 3.07
3186 3312 4.564799 TGATTCTTCCTCCTCCTCATCAT 58.435 43.478 0.00 0.00 0.00 2.45
3187 3313 4.592351 TGATTCTTCCTCCTCCTCATCATC 59.408 45.833 0.00 0.00 0.00 2.92
3188 3314 3.695357 TCTTCCTCCTCCTCATCATCA 57.305 47.619 0.00 0.00 0.00 3.07
3189 3315 3.574749 TCTTCCTCCTCCTCATCATCAG 58.425 50.000 0.00 0.00 0.00 2.90
3190 3316 3.206185 TCTTCCTCCTCCTCATCATCAGA 59.794 47.826 0.00 0.00 0.00 3.27
3191 3317 3.919304 TCCTCCTCCTCATCATCAGAT 57.081 47.619 0.00 0.00 33.87 2.90
3192 3318 3.777087 TCCTCCTCCTCATCATCAGATC 58.223 50.000 0.00 0.00 30.20 2.75
3193 3319 3.141649 TCCTCCTCCTCATCATCAGATCA 59.858 47.826 0.00 0.00 30.20 2.92
3194 3320 3.258872 CCTCCTCCTCATCATCAGATCAC 59.741 52.174 0.00 0.00 30.20 3.06
3195 3321 2.889678 TCCTCCTCATCATCAGATCACG 59.110 50.000 0.00 0.00 30.20 4.35
3196 3322 2.627221 CCTCCTCATCATCAGATCACGT 59.373 50.000 0.00 0.00 30.20 4.49
3197 3323 3.552478 CCTCCTCATCATCAGATCACGTG 60.552 52.174 9.94 9.94 30.20 4.49
3198 3324 3.290710 TCCTCATCATCAGATCACGTGA 58.709 45.455 22.48 22.48 30.20 4.35
3199 3325 3.701040 TCCTCATCATCAGATCACGTGAA 59.299 43.478 24.13 6.18 30.20 3.18
3200 3326 4.049869 CCTCATCATCAGATCACGTGAAG 58.950 47.826 24.13 15.35 30.20 3.02
3201 3327 3.451526 TCATCATCAGATCACGTGAAGC 58.548 45.455 24.13 17.33 30.20 3.86
3202 3328 3.131755 TCATCATCAGATCACGTGAAGCT 59.868 43.478 24.13 19.35 30.20 3.74
3203 3329 3.156511 TCATCAGATCACGTGAAGCTC 57.843 47.619 24.13 15.79 0.00 4.09
3204 3330 1.851053 CATCAGATCACGTGAAGCTCG 59.149 52.381 24.13 15.76 0.00 5.03
3205 3331 0.171231 TCAGATCACGTGAAGCTCGG 59.829 55.000 24.13 16.06 0.00 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 9.803315 ACCATTGTTAAGAAAGAGAAAAAGTTC 57.197 29.630 0.00 0.00 0.00 3.01
76 79 9.846248 CCAAGAATAACCATTGTTAAGAAAGAG 57.154 33.333 0.00 0.00 40.21 2.85
258 263 7.196331 ACAAAAGATAGACAACAAAGAAGCAC 58.804 34.615 0.00 0.00 0.00 4.40
370 375 1.591158 TCACTCGCGACACACTTTTTC 59.409 47.619 3.71 0.00 0.00 2.29
380 388 0.791983 TCGATTTCGTCACTCGCGAC 60.792 55.000 3.71 0.00 38.14 5.19
381 389 0.110101 TTCGATTTCGTCACTCGCGA 60.110 50.000 9.26 9.26 40.80 5.87
384 392 2.526077 TCCATTCGATTTCGTCACTCG 58.474 47.619 0.00 0.00 40.80 4.18
386 394 5.391950 CCATTTTCCATTCGATTTCGTCACT 60.392 40.000 0.00 0.00 40.80 3.41
387 395 4.793216 CCATTTTCCATTCGATTTCGTCAC 59.207 41.667 0.00 0.00 40.80 3.67
388 396 4.142491 CCCATTTTCCATTCGATTTCGTCA 60.142 41.667 0.00 0.00 40.80 4.35
389 397 4.095782 TCCCATTTTCCATTCGATTTCGTC 59.904 41.667 0.00 0.00 40.80 4.20
417 425 5.530915 TCTCAAGTCAAACCATGTAAACAGG 59.469 40.000 0.00 0.00 0.00 4.00
476 488 3.891366 CCCAGAAGTTGTGAAATGGTCTT 59.109 43.478 0.68 0.00 0.00 3.01
510 522 9.819267 AAGACTTATATTTAGAAACGGAGGAAG 57.181 33.333 0.00 0.00 0.00 3.46
550 562 9.658799 ACGTAGTTTATAGTGTGTAGTCTCTTA 57.341 33.333 0.00 0.00 37.78 2.10
551 563 8.558973 ACGTAGTTTATAGTGTGTAGTCTCTT 57.441 34.615 0.00 0.00 37.78 2.85
573 585 8.877779 GGACTACATACGAATGTATATAGACGT 58.122 37.037 7.52 0.00 45.33 4.34
574 586 8.876790 TGGACTACATACGAATGTATATAGACG 58.123 37.037 7.52 0.00 45.33 4.18
579 591 9.132923 CCCTATGGACTACATACGAATGTATAT 57.867 37.037 0.00 0.00 45.33 0.86
580 592 8.330993 TCCCTATGGACTACATACGAATGTATA 58.669 37.037 0.00 0.00 40.50 1.47
581 593 7.179966 TCCCTATGGACTACATACGAATGTAT 58.820 38.462 0.00 0.00 40.50 2.29
582 594 6.545567 TCCCTATGGACTACATACGAATGTA 58.454 40.000 0.00 0.00 40.45 2.29
583 595 5.391256 TCCCTATGGACTACATACGAATGT 58.609 41.667 0.00 0.00 41.81 2.71
584 596 5.977489 TCCCTATGGACTACATACGAATG 57.023 43.478 0.00 0.00 41.03 2.67
585 597 6.989155 TTTCCCTATGGACTACATACGAAT 57.011 37.500 0.00 0.00 41.57 3.34
586 598 6.781014 AGATTTCCCTATGGACTACATACGAA 59.219 38.462 0.00 0.00 41.57 3.85
587 599 6.312529 AGATTTCCCTATGGACTACATACGA 58.687 40.000 0.00 0.00 41.57 3.43
588 600 6.434652 AGAGATTTCCCTATGGACTACATACG 59.565 42.308 0.00 0.00 41.57 3.06
589 601 7.784470 AGAGATTTCCCTATGGACTACATAC 57.216 40.000 0.00 0.00 41.57 2.39
590 602 8.901841 TCTAGAGATTTCCCTATGGACTACATA 58.098 37.037 0.00 0.00 41.57 2.29
591 603 7.770662 TCTAGAGATTTCCCTATGGACTACAT 58.229 38.462 0.00 0.00 41.57 2.29
592 604 7.162973 TCTAGAGATTTCCCTATGGACTACA 57.837 40.000 0.00 0.00 41.57 2.74
593 605 8.480133 TTTCTAGAGATTTCCCTATGGACTAC 57.520 38.462 0.00 0.00 41.57 2.73
594 606 8.511969 TCTTTCTAGAGATTTCCCTATGGACTA 58.488 37.037 0.00 0.00 41.57 2.59
595 607 7.289084 GTCTTTCTAGAGATTTCCCTATGGACT 59.711 40.741 0.00 0.00 41.57 3.85
596 608 7.289084 AGTCTTTCTAGAGATTTCCCTATGGAC 59.711 40.741 0.00 0.00 41.57 4.02
597 609 7.366226 AGTCTTTCTAGAGATTTCCCTATGGA 58.634 38.462 0.00 0.00 39.54 3.41
598 610 7.610580 AGTCTTTCTAGAGATTTCCCTATGG 57.389 40.000 0.00 0.00 0.00 2.74
599 611 8.482128 ACAAGTCTTTCTAGAGATTTCCCTATG 58.518 37.037 0.00 0.00 0.00 2.23
600 612 8.616799 ACAAGTCTTTCTAGAGATTTCCCTAT 57.383 34.615 0.00 0.00 0.00 2.57
601 613 9.716556 ATACAAGTCTTTCTAGAGATTTCCCTA 57.283 33.333 0.00 0.00 0.00 3.53
602 614 6.943899 ACAAGTCTTTCTAGAGATTTCCCT 57.056 37.500 0.00 0.00 0.00 4.20
603 615 9.674068 AAATACAAGTCTTTCTAGAGATTTCCC 57.326 33.333 0.00 0.00 0.00 3.97
612 624 9.372369 CCTGTTCCTAAATACAAGTCTTTCTAG 57.628 37.037 0.00 0.00 0.00 2.43
613 625 8.319146 CCCTGTTCCTAAATACAAGTCTTTCTA 58.681 37.037 0.00 0.00 0.00 2.10
614 626 7.017254 TCCCTGTTCCTAAATACAAGTCTTTCT 59.983 37.037 0.00 0.00 0.00 2.52
615 627 7.166167 TCCCTGTTCCTAAATACAAGTCTTTC 58.834 38.462 0.00 0.00 0.00 2.62
616 628 7.086685 TCCCTGTTCCTAAATACAAGTCTTT 57.913 36.000 0.00 0.00 0.00 2.52
617 629 6.272558 ACTCCCTGTTCCTAAATACAAGTCTT 59.727 38.462 0.00 0.00 0.00 3.01
618 630 5.785940 ACTCCCTGTTCCTAAATACAAGTCT 59.214 40.000 0.00 0.00 0.00 3.24
619 631 6.051179 ACTCCCTGTTCCTAAATACAAGTC 57.949 41.667 0.00 0.00 0.00 3.01
620 632 7.750947 ATACTCCCTGTTCCTAAATACAAGT 57.249 36.000 0.00 0.00 0.00 3.16
626 638 9.799106 CATGAAATATACTCCCTGTTCCTAAAT 57.201 33.333 0.00 0.00 0.00 1.40
627 639 7.719633 GCATGAAATATACTCCCTGTTCCTAAA 59.280 37.037 0.00 0.00 0.00 1.85
628 640 7.147391 TGCATGAAATATACTCCCTGTTCCTAA 60.147 37.037 0.00 0.00 0.00 2.69
629 641 6.328934 TGCATGAAATATACTCCCTGTTCCTA 59.671 38.462 0.00 0.00 0.00 2.94
630 642 5.132648 TGCATGAAATATACTCCCTGTTCCT 59.867 40.000 0.00 0.00 0.00 3.36
631 643 5.376625 TGCATGAAATATACTCCCTGTTCC 58.623 41.667 0.00 0.00 0.00 3.62
632 644 6.712095 TCATGCATGAAATATACTCCCTGTTC 59.288 38.462 26.87 0.00 33.08 3.18
633 645 6.604171 TCATGCATGAAATATACTCCCTGTT 58.396 36.000 26.87 0.00 33.08 3.16
634 646 6.191657 TCATGCATGAAATATACTCCCTGT 57.808 37.500 26.87 0.00 33.08 4.00
660 672 6.917533 AGTTCATCAAGCCAAAAATACTCTG 58.082 36.000 0.00 0.00 0.00 3.35
752 764 3.290308 ACTCTGAGTTGTGACGTCATC 57.710 47.619 23.12 15.41 0.00 2.92
789 802 0.832135 TCTCCCGACCAGCTGTTCTT 60.832 55.000 13.81 0.00 0.00 2.52
798 811 0.895530 GTGTTCTCATCTCCCGACCA 59.104 55.000 0.00 0.00 0.00 4.02
971 991 1.270625 TGGAAACCTTGCTCGGTAGTG 60.271 52.381 0.00 0.00 35.89 2.74
1603 1709 5.925506 ATTGAATTGAGTTGATGATGCCA 57.074 34.783 0.00 0.00 0.00 4.92
1605 1711 7.821595 TTGAATTGAATTGAGTTGATGATGC 57.178 32.000 0.00 0.00 0.00 3.91
1626 1732 5.477984 GCATATGAATTAGGAGGGCAATTGA 59.522 40.000 10.34 0.00 0.00 2.57
1627 1733 5.479375 AGCATATGAATTAGGAGGGCAATTG 59.521 40.000 6.97 0.00 0.00 2.32
1628 1734 5.648247 AGCATATGAATTAGGAGGGCAATT 58.352 37.500 6.97 0.00 0.00 2.32
1629 1735 5.266709 AGCATATGAATTAGGAGGGCAAT 57.733 39.130 6.97 0.00 0.00 3.56
1630 1736 4.729552 AGCATATGAATTAGGAGGGCAA 57.270 40.909 6.97 0.00 0.00 4.52
1631 1737 4.729552 AAGCATATGAATTAGGAGGGCA 57.270 40.909 6.97 0.00 0.00 5.36
1664 1775 2.047844 CCACGAGCAGACCACCAG 60.048 66.667 0.00 0.00 0.00 4.00
1667 1778 1.523758 AATTTCCACGAGCAGACCAC 58.476 50.000 0.00 0.00 0.00 4.16
1670 1781 1.266718 TGCAAATTTCCACGAGCAGAC 59.733 47.619 0.00 0.00 0.00 3.51
2263 2377 8.258708 CACTGATTAAGCCCTACTAATATACCC 58.741 40.741 0.00 0.00 0.00 3.69
2358 2482 1.248486 TGAGACTTGAGACCTCCACG 58.752 55.000 0.00 0.00 0.00 4.94
2524 2650 6.070767 TCGAATCTCAAATCCCTACAAGTTCT 60.071 38.462 0.00 0.00 0.00 3.01
2532 2658 4.901849 AGTCCATCGAATCTCAAATCCCTA 59.098 41.667 0.00 0.00 0.00 3.53
2540 2666 1.405463 CGACCAGTCCATCGAATCTCA 59.595 52.381 0.00 0.00 40.86 3.27
2581 2707 3.191162 TGCGGATCACCAAAGAATCTTTG 59.809 43.478 24.53 24.53 35.59 2.77
2583 2709 2.749621 GTGCGGATCACCAAAGAATCTT 59.250 45.455 0.00 0.00 39.79 2.40
2586 2712 2.496899 AGTGCGGATCACCAAAGAAT 57.503 45.000 0.00 0.00 46.81 2.40
2587 2713 2.301870 ACTAGTGCGGATCACCAAAGAA 59.698 45.455 0.00 0.00 46.81 2.52
2601 2727 6.681777 ACTGGAAAATCAATTGAACTAGTGC 58.318 36.000 13.09 0.00 0.00 4.40
2609 2735 9.699410 ATCAGGTATTACTGGAAAATCAATTGA 57.301 29.630 11.26 11.26 38.98 2.57
2629 2755 3.795688 ATGTCAACCAGAACATCAGGT 57.204 42.857 0.00 0.00 37.94 4.00
2666 2792 2.467826 GCGGCTGTTGGAGATGCTC 61.468 63.158 0.00 0.00 0.00 4.26
2667 2793 2.437359 GCGGCTGTTGGAGATGCT 60.437 61.111 0.00 0.00 0.00 3.79
2668 2794 3.512516 GGCGGCTGTTGGAGATGC 61.513 66.667 0.00 0.00 0.00 3.91
2669 2795 2.825836 GGGCGGCTGTTGGAGATG 60.826 66.667 9.56 0.00 0.00 2.90
2670 2796 2.905996 TTGGGCGGCTGTTGGAGAT 61.906 57.895 9.56 0.00 0.00 2.75
2671 2797 3.565214 TTGGGCGGCTGTTGGAGA 61.565 61.111 9.56 0.00 0.00 3.71
2672 2798 3.365265 GTTGGGCGGCTGTTGGAG 61.365 66.667 9.56 0.00 0.00 3.86
2724 2850 3.736100 TCCCACGCGCTGCATTTG 61.736 61.111 5.73 0.00 0.00 2.32
2725 2851 3.737172 GTCCCACGCGCTGCATTT 61.737 61.111 5.73 0.00 0.00 2.32
2726 2852 4.704833 AGTCCCACGCGCTGCATT 62.705 61.111 5.73 0.00 0.00 3.56
2754 2880 5.128335 TGTGTCCAAAATGCAATATATGGCA 59.872 36.000 17.14 17.14 45.23 4.92
2755 2881 5.599732 TGTGTCCAAAATGCAATATATGGC 58.400 37.500 5.02 5.02 0.00 4.40
2756 2882 8.489990 TTTTGTGTCCAAAATGCAATATATGG 57.510 30.769 0.00 0.00 43.72 2.74
2769 2895 8.327941 TGTTTGAAATTCATTTTGTGTCCAAA 57.672 26.923 0.00 0.00 38.77 3.28
2770 2896 7.912056 TGTTTGAAATTCATTTTGTGTCCAA 57.088 28.000 0.00 0.00 0.00 3.53
2771 2897 8.503458 AATGTTTGAAATTCATTTTGTGTCCA 57.497 26.923 0.00 0.00 0.00 4.02
2772 2898 8.610896 TGAATGTTTGAAATTCATTTTGTGTCC 58.389 29.630 0.00 0.00 38.73 4.02
2773 2899 9.985318 TTGAATGTTTGAAATTCATTTTGTGTC 57.015 25.926 0.00 0.00 42.15 3.67
2782 2908 9.452065 CATTGCATTTTGAATGTTTGAAATTCA 57.548 25.926 0.00 0.00 41.19 2.57
2783 2909 9.666626 TCATTGCATTTTGAATGTTTGAAATTC 57.333 25.926 0.00 0.00 35.10 2.17
2785 2911 9.453325 GTTCATTGCATTTTGAATGTTTGAAAT 57.547 25.926 9.58 0.00 34.60 2.17
2786 2912 8.456471 TGTTCATTGCATTTTGAATGTTTGAAA 58.544 25.926 9.58 0.00 34.60 2.69
2787 2913 7.982224 TGTTCATTGCATTTTGAATGTTTGAA 58.018 26.923 9.58 6.70 34.60 2.69
2788 2914 7.549615 TGTTCATTGCATTTTGAATGTTTGA 57.450 28.000 9.58 1.93 34.60 2.69
2789 2915 7.324856 CCATGTTCATTGCATTTTGAATGTTTG 59.675 33.333 9.58 6.39 34.60 2.93
2790 2916 7.364200 CCATGTTCATTGCATTTTGAATGTTT 58.636 30.769 9.58 0.00 34.60 2.83
2791 2917 6.568844 GCCATGTTCATTGCATTTTGAATGTT 60.569 34.615 9.58 0.00 34.60 2.71
2792 2918 5.106475 GCCATGTTCATTGCATTTTGAATGT 60.106 36.000 9.58 1.69 34.60 2.71
2793 2919 5.106515 TGCCATGTTCATTGCATTTTGAATG 60.107 36.000 7.33 0.00 34.60 2.67
2794 2920 5.004448 TGCCATGTTCATTGCATTTTGAAT 58.996 33.333 7.33 0.00 34.60 2.57
2795 2921 4.386711 TGCCATGTTCATTGCATTTTGAA 58.613 34.783 7.33 0.00 0.00 2.69
2796 2922 4.004196 TGCCATGTTCATTGCATTTTGA 57.996 36.364 7.33 0.00 0.00 2.69
2797 2923 4.955925 ATGCCATGTTCATTGCATTTTG 57.044 36.364 15.41 0.00 41.40 2.44
2798 2924 8.734218 TTTATATGCCATGTTCATTGCATTTT 57.266 26.923 22.67 15.59 41.40 1.82
2799 2925 8.911918 ATTTATATGCCATGTTCATTGCATTT 57.088 26.923 22.67 18.50 41.40 2.32
2800 2926 8.911918 AATTTATATGCCATGTTCATTGCATT 57.088 26.923 22.67 15.26 41.40 3.56
2801 2927 8.911918 AAATTTATATGCCATGTTCATTGCAT 57.088 26.923 21.69 21.69 45.67 3.96
2802 2928 7.985752 TGAAATTTATATGCCATGTTCATTGCA 59.014 29.630 12.58 12.58 38.23 4.08
2803 2929 8.277713 GTGAAATTTATATGCCATGTTCATTGC 58.722 33.333 3.47 2.53 0.00 3.56
2804 2930 9.315525 TGTGAAATTTATATGCCATGTTCATTG 57.684 29.630 3.47 0.00 0.00 2.82
2813 2939 9.814899 CCTTGTTTATGTGAAATTTATATGCCA 57.185 29.630 0.00 0.00 0.00 4.92
2820 2946 9.995003 AATGCTTCCTTGTTTATGTGAAATTTA 57.005 25.926 0.00 0.00 0.00 1.40
2821 2947 8.776470 CAATGCTTCCTTGTTTATGTGAAATTT 58.224 29.630 0.00 0.00 0.00 1.82
2822 2948 7.388500 CCAATGCTTCCTTGTTTATGTGAAATT 59.612 33.333 0.00 0.00 0.00 1.82
2823 2949 6.875195 CCAATGCTTCCTTGTTTATGTGAAAT 59.125 34.615 0.00 0.00 0.00 2.17
2824 2950 6.183360 ACCAATGCTTCCTTGTTTATGTGAAA 60.183 34.615 0.00 0.00 0.00 2.69
2825 2951 5.304101 ACCAATGCTTCCTTGTTTATGTGAA 59.696 36.000 0.00 0.00 0.00 3.18
2826 2952 4.832266 ACCAATGCTTCCTTGTTTATGTGA 59.168 37.500 0.00 0.00 0.00 3.58
2827 2953 5.138125 ACCAATGCTTCCTTGTTTATGTG 57.862 39.130 0.00 0.00 0.00 3.21
2828 2954 5.806654 AACCAATGCTTCCTTGTTTATGT 57.193 34.783 0.00 0.00 0.00 2.29
2829 2955 9.301153 GTATAAACCAATGCTTCCTTGTTTATG 57.699 33.333 13.00 0.00 30.94 1.90
2830 2956 8.188139 CGTATAAACCAATGCTTCCTTGTTTAT 58.812 33.333 0.00 0.00 31.93 1.40
2831 2957 7.175293 ACGTATAAACCAATGCTTCCTTGTTTA 59.825 33.333 0.00 0.00 0.00 2.01
2832 2958 6.015772 ACGTATAAACCAATGCTTCCTTGTTT 60.016 34.615 0.00 0.00 0.00 2.83
2833 2959 5.475564 ACGTATAAACCAATGCTTCCTTGTT 59.524 36.000 0.00 0.00 0.00 2.83
2834 2960 5.007682 ACGTATAAACCAATGCTTCCTTGT 58.992 37.500 0.00 0.00 0.00 3.16
2835 2961 5.560966 ACGTATAAACCAATGCTTCCTTG 57.439 39.130 0.00 0.00 0.00 3.61
2836 2962 5.124936 GGAACGTATAAACCAATGCTTCCTT 59.875 40.000 0.00 0.00 0.00 3.36
2837 2963 4.638865 GGAACGTATAAACCAATGCTTCCT 59.361 41.667 0.00 0.00 0.00 3.36
2838 2964 4.638865 AGGAACGTATAAACCAATGCTTCC 59.361 41.667 0.00 0.00 0.00 3.46
2839 2965 5.813080 AGGAACGTATAAACCAATGCTTC 57.187 39.130 0.00 0.00 0.00 3.86
2840 2966 6.584185 AAAGGAACGTATAAACCAATGCTT 57.416 33.333 0.00 0.00 0.00 3.91
2841 2967 6.584185 AAAAGGAACGTATAAACCAATGCT 57.416 33.333 0.00 0.00 0.00 3.79
2842 2968 7.532571 ACTAAAAGGAACGTATAAACCAATGC 58.467 34.615 0.00 0.00 0.00 3.56
2843 2969 9.902196 AAACTAAAAGGAACGTATAAACCAATG 57.098 29.630 0.00 0.00 0.00 2.82
2845 2971 8.281893 CGAAACTAAAAGGAACGTATAAACCAA 58.718 33.333 0.00 0.00 0.00 3.67
2846 2972 7.655328 TCGAAACTAAAAGGAACGTATAAACCA 59.345 33.333 0.00 0.00 0.00 3.67
2847 2973 7.952101 GTCGAAACTAAAAGGAACGTATAAACC 59.048 37.037 0.00 0.00 0.00 3.27
2848 2974 8.703336 AGTCGAAACTAAAAGGAACGTATAAAC 58.297 33.333 0.00 0.00 32.59 2.01
2849 2975 8.816640 AGTCGAAACTAAAAGGAACGTATAAA 57.183 30.769 0.00 0.00 32.59 1.40
2850 2976 8.816640 AAGTCGAAACTAAAAGGAACGTATAA 57.183 30.769 0.00 0.00 33.48 0.98
2851 2977 8.816640 AAAGTCGAAACTAAAAGGAACGTATA 57.183 30.769 0.00 0.00 33.48 1.47
2852 2978 7.719778 AAAGTCGAAACTAAAAGGAACGTAT 57.280 32.000 0.00 0.00 33.48 3.06
2853 2979 7.382218 CCTAAAGTCGAAACTAAAAGGAACGTA 59.618 37.037 0.00 0.00 33.60 3.57
2854 2980 6.201615 CCTAAAGTCGAAACTAAAAGGAACGT 59.798 38.462 0.00 0.00 33.60 3.99
2855 2981 6.347160 CCCTAAAGTCGAAACTAAAAGGAACG 60.347 42.308 0.00 0.00 33.60 3.95
2856 2982 6.707608 TCCCTAAAGTCGAAACTAAAAGGAAC 59.292 38.462 0.00 0.00 33.60 3.62
2857 2983 6.829849 TCCCTAAAGTCGAAACTAAAAGGAA 58.170 36.000 0.00 0.00 33.60 3.36
2858 2984 6.423776 TCCCTAAAGTCGAAACTAAAAGGA 57.576 37.500 0.00 0.00 33.60 3.36
2859 2985 8.782339 TTATCCCTAAAGTCGAAACTAAAAGG 57.218 34.615 0.00 0.00 33.48 3.11
2886 3012 8.407832 CCCTAAAGTCGAAACTAAAAGGAAAAA 58.592 33.333 0.00 0.00 33.60 1.94
2887 3013 7.774625 TCCCTAAAGTCGAAACTAAAAGGAAAA 59.225 33.333 0.00 0.00 33.60 2.29
2888 3014 7.281841 TCCCTAAAGTCGAAACTAAAAGGAAA 58.718 34.615 0.00 0.00 33.60 3.13
2889 3015 6.829849 TCCCTAAAGTCGAAACTAAAAGGAA 58.170 36.000 0.00 0.00 33.60 3.36
2890 3016 6.423776 TCCCTAAAGTCGAAACTAAAAGGA 57.576 37.500 0.00 0.00 33.60 3.36
2891 3017 8.782339 TTATCCCTAAAGTCGAAACTAAAAGG 57.218 34.615 0.00 0.00 33.48 3.11
2918 3044 4.081862 TCTCGGAAGAAGATAGCGGAAAAA 60.082 41.667 0.00 0.00 41.32 1.94
2919 3045 3.446161 TCTCGGAAGAAGATAGCGGAAAA 59.554 43.478 0.00 0.00 41.32 2.29
2920 3046 3.021695 TCTCGGAAGAAGATAGCGGAAA 58.978 45.455 0.00 0.00 41.32 3.13
2921 3047 2.651455 TCTCGGAAGAAGATAGCGGAA 58.349 47.619 0.00 0.00 41.32 4.30
2922 3048 2.343484 TCTCGGAAGAAGATAGCGGA 57.657 50.000 0.00 0.00 41.32 5.54
2923 3049 2.544069 GGTTCTCGGAAGAAGATAGCGG 60.544 54.545 0.00 0.00 42.14 5.52
2924 3050 2.099263 TGGTTCTCGGAAGAAGATAGCG 59.901 50.000 0.00 0.00 42.14 4.26
2925 3051 3.449632 GTGGTTCTCGGAAGAAGATAGC 58.550 50.000 0.00 0.00 42.14 2.97
2926 3052 3.702045 AGGTGGTTCTCGGAAGAAGATAG 59.298 47.826 0.00 0.00 42.14 2.08
2927 3053 3.709587 AGGTGGTTCTCGGAAGAAGATA 58.290 45.455 0.00 0.00 42.14 1.98
2928 3054 2.541466 AGGTGGTTCTCGGAAGAAGAT 58.459 47.619 0.00 0.00 42.14 2.40
2929 3055 2.011122 AGGTGGTTCTCGGAAGAAGA 57.989 50.000 0.00 0.00 42.14 2.87
2930 3056 3.368531 CCTTAGGTGGTTCTCGGAAGAAG 60.369 52.174 0.00 0.00 42.14 2.85
2931 3057 2.565834 CCTTAGGTGGTTCTCGGAAGAA 59.434 50.000 0.00 0.00 41.32 2.52
2932 3058 2.176889 CCTTAGGTGGTTCTCGGAAGA 58.823 52.381 0.00 0.00 39.12 2.87
2933 3059 1.900486 ACCTTAGGTGGTTCTCGGAAG 59.100 52.381 1.74 0.00 36.89 3.46
2934 3060 2.019807 ACCTTAGGTGGTTCTCGGAA 57.980 50.000 1.74 0.00 36.89 4.30
2935 3061 2.019807 AACCTTAGGTGGTTCTCGGA 57.980 50.000 3.99 0.00 46.37 4.55
2942 3068 1.071228 GTTCGTGGAACCTTAGGTGGT 59.929 52.381 3.99 0.00 43.11 4.16
2943 3069 1.346722 AGTTCGTGGAACCTTAGGTGG 59.653 52.381 3.99 0.00 42.85 4.61
2944 3070 2.612221 GGAGTTCGTGGAACCTTAGGTG 60.612 54.545 3.99 0.00 42.85 4.00
2945 3071 1.622312 GGAGTTCGTGGAACCTTAGGT 59.378 52.381 0.00 0.00 42.85 3.08
2946 3072 1.621814 TGGAGTTCGTGGAACCTTAGG 59.378 52.381 0.00 0.00 42.85 2.69
2947 3073 3.064931 GTTGGAGTTCGTGGAACCTTAG 58.935 50.000 4.96 0.00 42.85 2.18
2948 3074 2.701951 AGTTGGAGTTCGTGGAACCTTA 59.298 45.455 4.96 0.00 42.85 2.69
2949 3075 1.489230 AGTTGGAGTTCGTGGAACCTT 59.511 47.619 4.96 0.00 42.85 3.50
2950 3076 1.129058 AGTTGGAGTTCGTGGAACCT 58.871 50.000 4.96 0.00 42.85 3.50
2951 3077 2.825861 TAGTTGGAGTTCGTGGAACC 57.174 50.000 4.96 0.00 42.85 3.62
2952 3078 4.812626 TCTTTTAGTTGGAGTTCGTGGAAC 59.187 41.667 0.32 0.32 42.25 3.62
2953 3079 5.026038 TCTTTTAGTTGGAGTTCGTGGAA 57.974 39.130 0.00 0.00 0.00 3.53
2954 3080 4.675976 TCTTTTAGTTGGAGTTCGTGGA 57.324 40.909 0.00 0.00 0.00 4.02
2955 3081 5.941948 ATTCTTTTAGTTGGAGTTCGTGG 57.058 39.130 0.00 0.00 0.00 4.94
2956 3082 7.653767 ACTATTCTTTTAGTTGGAGTTCGTG 57.346 36.000 0.00 0.00 0.00 4.35
2975 3101 9.807649 GGCATGAACTTTTATTCATCAACTATT 57.192 29.630 0.00 0.00 44.30 1.73
2976 3102 8.416329 GGGCATGAACTTTTATTCATCAACTAT 58.584 33.333 0.00 0.00 44.30 2.12
2977 3103 7.395772 TGGGCATGAACTTTTATTCATCAACTA 59.604 33.333 0.00 0.00 44.30 2.24
2978 3104 6.211184 TGGGCATGAACTTTTATTCATCAACT 59.789 34.615 0.00 0.00 44.30 3.16
2979 3105 6.311200 GTGGGCATGAACTTTTATTCATCAAC 59.689 38.462 0.00 0.00 44.30 3.18
2980 3106 6.014755 TGTGGGCATGAACTTTTATTCATCAA 60.015 34.615 0.00 0.00 44.30 2.57
2981 3107 5.479724 TGTGGGCATGAACTTTTATTCATCA 59.520 36.000 0.00 0.00 44.30 3.07
2982 3108 5.964758 TGTGGGCATGAACTTTTATTCATC 58.035 37.500 0.00 0.00 44.30 2.92
2984 3110 5.798125 TTGTGGGCATGAACTTTTATTCA 57.202 34.783 0.00 0.00 42.62 2.57
2985 3111 7.671495 AATTTGTGGGCATGAACTTTTATTC 57.329 32.000 0.00 0.00 0.00 1.75
2986 3112 9.566432 TTAAATTTGTGGGCATGAACTTTTATT 57.434 25.926 0.00 0.00 0.00 1.40
2987 3113 9.566432 TTTAAATTTGTGGGCATGAACTTTTAT 57.434 25.926 0.00 0.00 0.00 1.40
2988 3114 8.964476 TTTAAATTTGTGGGCATGAACTTTTA 57.036 26.923 0.00 0.00 0.00 1.52
2989 3115 7.872113 TTTAAATTTGTGGGCATGAACTTTT 57.128 28.000 0.00 0.00 0.00 2.27
2990 3116 7.872113 TTTTAAATTTGTGGGCATGAACTTT 57.128 28.000 0.00 0.00 0.00 2.66
2991 3117 7.718753 TGATTTTAAATTTGTGGGCATGAACTT 59.281 29.630 0.00 0.00 0.00 2.66
2992 3118 7.222872 TGATTTTAAATTTGTGGGCATGAACT 58.777 30.769 0.00 0.00 0.00 3.01
2993 3119 7.432350 TGATTTTAAATTTGTGGGCATGAAC 57.568 32.000 0.00 0.00 0.00 3.18
2994 3120 7.361885 GCATGATTTTAAATTTGTGGGCATGAA 60.362 33.333 19.96 0.00 33.23 2.57
2995 3121 6.093771 GCATGATTTTAAATTTGTGGGCATGA 59.906 34.615 19.96 0.00 33.23 3.07
2996 3122 6.259638 GCATGATTTTAAATTTGTGGGCATG 58.740 36.000 15.10 15.10 34.23 4.06
2997 3123 5.357596 GGCATGATTTTAAATTTGTGGGCAT 59.642 36.000 0.00 0.00 0.00 4.40
2998 3124 4.699257 GGCATGATTTTAAATTTGTGGGCA 59.301 37.500 0.00 0.00 0.00 5.36
2999 3125 4.096231 GGGCATGATTTTAAATTTGTGGGC 59.904 41.667 0.00 0.00 0.00 5.36
3000 3126 5.123661 GTGGGCATGATTTTAAATTTGTGGG 59.876 40.000 0.00 0.00 0.00 4.61
3001 3127 5.704515 TGTGGGCATGATTTTAAATTTGTGG 59.295 36.000 0.00 0.00 0.00 4.17
3002 3128 6.798315 TGTGGGCATGATTTTAAATTTGTG 57.202 33.333 0.00 0.00 0.00 3.33
3003 3129 6.997476 ACTTGTGGGCATGATTTTAAATTTGT 59.003 30.769 0.00 0.00 0.00 2.83
3004 3130 7.437793 ACTTGTGGGCATGATTTTAAATTTG 57.562 32.000 0.00 0.00 0.00 2.32
3005 3131 8.462589 AAACTTGTGGGCATGATTTTAAATTT 57.537 26.923 0.00 0.00 0.00 1.82
3006 3132 9.566432 TTAAACTTGTGGGCATGATTTTAAATT 57.434 25.926 0.00 0.00 0.00 1.82
3007 3133 9.566432 TTTAAACTTGTGGGCATGATTTTAAAT 57.434 25.926 0.00 0.00 0.00 1.40
3008 3134 8.964476 TTTAAACTTGTGGGCATGATTTTAAA 57.036 26.923 0.00 0.00 0.00 1.52
3009 3135 8.964476 TTTTAAACTTGTGGGCATGATTTTAA 57.036 26.923 0.00 0.00 0.00 1.52
3010 3136 9.213799 GATTTTAAACTTGTGGGCATGATTTTA 57.786 29.630 0.00 0.00 0.00 1.52
3011 3137 7.718753 TGATTTTAAACTTGTGGGCATGATTTT 59.281 29.630 0.00 0.00 0.00 1.82
3012 3138 7.222872 TGATTTTAAACTTGTGGGCATGATTT 58.777 30.769 0.00 0.00 0.00 2.17
3013 3139 6.767456 TGATTTTAAACTTGTGGGCATGATT 58.233 32.000 0.00 0.00 0.00 2.57
3014 3140 6.357579 TGATTTTAAACTTGTGGGCATGAT 57.642 33.333 0.00 0.00 0.00 2.45
3015 3141 5.798125 TGATTTTAAACTTGTGGGCATGA 57.202 34.783 0.00 0.00 0.00 3.07
3016 3142 5.163834 GCATGATTTTAAACTTGTGGGCATG 60.164 40.000 0.00 0.00 34.23 4.06
3017 3143 4.937015 GCATGATTTTAAACTTGTGGGCAT 59.063 37.500 0.00 0.00 0.00 4.40
3018 3144 4.040217 AGCATGATTTTAAACTTGTGGGCA 59.960 37.500 0.00 0.00 0.00 5.36
3019 3145 4.568956 AGCATGATTTTAAACTTGTGGGC 58.431 39.130 0.00 0.00 0.00 5.36
3020 3146 5.634859 GTGAGCATGATTTTAAACTTGTGGG 59.365 40.000 0.00 0.00 0.00 4.61
3021 3147 6.215121 TGTGAGCATGATTTTAAACTTGTGG 58.785 36.000 0.00 0.00 0.00 4.17
3022 3148 7.436080 ACTTGTGAGCATGATTTTAAACTTGTG 59.564 33.333 0.00 0.00 0.00 3.33
3023 3149 7.491682 ACTTGTGAGCATGATTTTAAACTTGT 58.508 30.769 0.00 0.00 0.00 3.16
3024 3150 7.935338 ACTTGTGAGCATGATTTTAAACTTG 57.065 32.000 0.00 0.00 0.00 3.16
3025 3151 8.947055 AAACTTGTGAGCATGATTTTAAACTT 57.053 26.923 0.00 0.00 0.00 2.66
3028 3154 9.638239 GGATAAACTTGTGAGCATGATTTTAAA 57.362 29.630 0.00 0.00 0.00 1.52
3029 3155 8.801299 TGGATAAACTTGTGAGCATGATTTTAA 58.199 29.630 0.00 0.00 0.00 1.52
3030 3156 8.347004 TGGATAAACTTGTGAGCATGATTTTA 57.653 30.769 0.00 0.00 0.00 1.52
3031 3157 7.230849 TGGATAAACTTGTGAGCATGATTTT 57.769 32.000 0.00 0.00 0.00 1.82
3032 3158 6.626623 GCTGGATAAACTTGTGAGCATGATTT 60.627 38.462 0.00 0.00 0.00 2.17
3033 3159 5.163581 GCTGGATAAACTTGTGAGCATGATT 60.164 40.000 0.00 0.00 0.00 2.57
3034 3160 4.337555 GCTGGATAAACTTGTGAGCATGAT 59.662 41.667 0.00 0.00 0.00 2.45
3035 3161 3.691118 GCTGGATAAACTTGTGAGCATGA 59.309 43.478 0.00 0.00 0.00 3.07
3036 3162 3.693085 AGCTGGATAAACTTGTGAGCATG 59.307 43.478 0.00 0.00 0.00 4.06
3037 3163 3.960571 AGCTGGATAAACTTGTGAGCAT 58.039 40.909 0.00 0.00 0.00 3.79
3038 3164 3.423539 AGCTGGATAAACTTGTGAGCA 57.576 42.857 0.00 0.00 0.00 4.26
3039 3165 4.938226 ACTTAGCTGGATAAACTTGTGAGC 59.062 41.667 0.00 0.00 0.00 4.26
3040 3166 6.650807 TGAACTTAGCTGGATAAACTTGTGAG 59.349 38.462 0.00 0.00 0.00 3.51
3041 3167 6.530120 TGAACTTAGCTGGATAAACTTGTGA 58.470 36.000 0.00 0.00 0.00 3.58
3042 3168 6.801539 TGAACTTAGCTGGATAAACTTGTG 57.198 37.500 0.00 0.00 0.00 3.33
3043 3169 7.817418 TTTGAACTTAGCTGGATAAACTTGT 57.183 32.000 0.00 0.00 0.00 3.16
3044 3170 9.132521 CATTTTGAACTTAGCTGGATAAACTTG 57.867 33.333 0.00 0.00 0.00 3.16
3045 3171 7.814587 GCATTTTGAACTTAGCTGGATAAACTT 59.185 33.333 0.00 0.00 0.00 2.66
3046 3172 7.039784 TGCATTTTGAACTTAGCTGGATAAACT 60.040 33.333 0.00 0.00 0.00 2.66
3047 3173 7.090173 TGCATTTTGAACTTAGCTGGATAAAC 58.910 34.615 0.00 0.00 0.00 2.01
3048 3174 7.225784 TGCATTTTGAACTTAGCTGGATAAA 57.774 32.000 0.00 0.00 0.00 1.40
3049 3175 6.832520 TGCATTTTGAACTTAGCTGGATAA 57.167 33.333 0.00 0.00 0.00 1.75
3050 3176 6.832520 TTGCATTTTGAACTTAGCTGGATA 57.167 33.333 0.00 0.00 0.00 2.59
3051 3177 5.726980 TTGCATTTTGAACTTAGCTGGAT 57.273 34.783 0.00 0.00 0.00 3.41
3052 3178 5.288804 GTTTGCATTTTGAACTTAGCTGGA 58.711 37.500 0.00 0.00 0.00 3.86
3053 3179 4.448732 GGTTTGCATTTTGAACTTAGCTGG 59.551 41.667 0.00 0.00 0.00 4.85
3054 3180 5.049167 TGGTTTGCATTTTGAACTTAGCTG 58.951 37.500 0.00 0.00 0.00 4.24
3055 3181 5.275067 TGGTTTGCATTTTGAACTTAGCT 57.725 34.783 0.00 0.00 0.00 3.32
3056 3182 5.523552 ACTTGGTTTGCATTTTGAACTTAGC 59.476 36.000 0.00 0.00 0.00 3.09
3057 3183 7.277539 TGAACTTGGTTTGCATTTTGAACTTAG 59.722 33.333 0.00 0.00 0.00 2.18
3058 3184 7.099764 TGAACTTGGTTTGCATTTTGAACTTA 58.900 30.769 0.00 0.00 0.00 2.24
3059 3185 5.936956 TGAACTTGGTTTGCATTTTGAACTT 59.063 32.000 0.00 0.00 0.00 2.66
3060 3186 5.486526 TGAACTTGGTTTGCATTTTGAACT 58.513 33.333 0.00 0.00 0.00 3.01
3061 3187 5.793026 TGAACTTGGTTTGCATTTTGAAC 57.207 34.783 0.00 0.00 0.00 3.18
3062 3188 6.111382 TCATGAACTTGGTTTGCATTTTGAA 58.889 32.000 0.00 0.00 0.00 2.69
3063 3189 5.668471 TCATGAACTTGGTTTGCATTTTGA 58.332 33.333 0.00 0.00 0.00 2.69
3064 3190 5.987777 TCATGAACTTGGTTTGCATTTTG 57.012 34.783 0.00 0.00 0.00 2.44
3065 3191 7.215789 TGTATCATGAACTTGGTTTGCATTTT 58.784 30.769 0.00 0.00 0.00 1.82
3066 3192 6.757237 TGTATCATGAACTTGGTTTGCATTT 58.243 32.000 0.00 0.00 0.00 2.32
3067 3193 6.343716 TGTATCATGAACTTGGTTTGCATT 57.656 33.333 0.00 0.00 0.00 3.56
3068 3194 5.981088 TGTATCATGAACTTGGTTTGCAT 57.019 34.783 0.00 0.00 0.00 3.96
3069 3195 5.781210 TTGTATCATGAACTTGGTTTGCA 57.219 34.783 0.00 0.00 0.00 4.08
3070 3196 5.116983 CGTTTGTATCATGAACTTGGTTTGC 59.883 40.000 0.00 0.00 0.00 3.68
3071 3197 6.434596 TCGTTTGTATCATGAACTTGGTTTG 58.565 36.000 0.00 0.00 0.00 2.93
3072 3198 6.627395 TCGTTTGTATCATGAACTTGGTTT 57.373 33.333 0.00 0.00 0.00 3.27
3073 3199 6.627395 TTCGTTTGTATCATGAACTTGGTT 57.373 33.333 0.00 0.00 0.00 3.67
3074 3200 6.485313 TCTTTCGTTTGTATCATGAACTTGGT 59.515 34.615 0.00 0.00 0.00 3.67
3075 3201 6.797033 GTCTTTCGTTTGTATCATGAACTTGG 59.203 38.462 0.00 0.00 0.00 3.61
3076 3202 6.516355 CGTCTTTCGTTTGTATCATGAACTTG 59.484 38.462 0.00 0.00 34.52 3.16
3077 3203 6.590357 CGTCTTTCGTTTGTATCATGAACTT 58.410 36.000 0.00 0.00 34.52 2.66
3078 3204 5.389516 GCGTCTTTCGTTTGTATCATGAACT 60.390 40.000 0.00 0.00 42.13 3.01
3079 3205 4.781528 GCGTCTTTCGTTTGTATCATGAAC 59.218 41.667 0.00 0.12 42.13 3.18
3080 3206 4.449405 TGCGTCTTTCGTTTGTATCATGAA 59.551 37.500 0.00 0.00 42.13 2.57
3081 3207 3.991121 TGCGTCTTTCGTTTGTATCATGA 59.009 39.130 0.00 0.00 42.13 3.07
3082 3208 4.320667 TGCGTCTTTCGTTTGTATCATG 57.679 40.909 0.00 0.00 42.13 3.07
3083 3209 5.545658 AATGCGTCTTTCGTTTGTATCAT 57.454 34.783 0.00 0.00 42.13 2.45
3084 3210 6.469139 TTAATGCGTCTTTCGTTTGTATCA 57.531 33.333 0.00 0.00 42.13 2.15
3085 3211 5.448162 GCTTAATGCGTCTTTCGTTTGTATC 59.552 40.000 0.00 0.00 42.13 2.24
3086 3212 5.321516 GCTTAATGCGTCTTTCGTTTGTAT 58.678 37.500 0.00 0.00 42.13 2.29
3087 3213 4.377635 GGCTTAATGCGTCTTTCGTTTGTA 60.378 41.667 0.00 0.00 44.05 2.41
3088 3214 3.551551 GCTTAATGCGTCTTTCGTTTGT 58.448 40.909 0.00 0.00 42.13 2.83
3089 3215 2.908626 GGCTTAATGCGTCTTTCGTTTG 59.091 45.455 0.00 0.00 44.05 2.93
3090 3216 2.812011 AGGCTTAATGCGTCTTTCGTTT 59.188 40.909 0.00 0.00 44.05 3.60
3091 3217 2.423577 AGGCTTAATGCGTCTTTCGTT 58.576 42.857 0.00 0.00 44.05 3.85
3092 3218 2.094762 AGGCTTAATGCGTCTTTCGT 57.905 45.000 0.00 0.00 44.05 3.85
3099 3225 0.249398 AAGGACGAGGCTTAATGCGT 59.751 50.000 0.00 0.00 44.05 5.24
3100 3226 0.652592 CAAGGACGAGGCTTAATGCG 59.347 55.000 0.00 0.00 44.05 4.73
3101 3227 1.666189 GACAAGGACGAGGCTTAATGC 59.334 52.381 0.00 0.00 41.94 3.56
3102 3228 3.252974 AGACAAGGACGAGGCTTAATG 57.747 47.619 0.00 0.00 0.00 1.90
3103 3229 3.676324 CGAAGACAAGGACGAGGCTTAAT 60.676 47.826 0.00 0.00 0.00 1.40
3104 3230 2.352421 CGAAGACAAGGACGAGGCTTAA 60.352 50.000 0.00 0.00 0.00 1.85
3105 3231 1.201647 CGAAGACAAGGACGAGGCTTA 59.798 52.381 0.00 0.00 0.00 3.09
3106 3232 0.038159 CGAAGACAAGGACGAGGCTT 60.038 55.000 0.00 0.00 0.00 4.35
3107 3233 1.179814 ACGAAGACAAGGACGAGGCT 61.180 55.000 0.00 0.00 0.00 4.58
3108 3234 0.319641 AACGAAGACAAGGACGAGGC 60.320 55.000 0.00 0.00 0.00 4.70
3109 3235 1.269998 AGAACGAAGACAAGGACGAGG 59.730 52.381 0.00 0.00 0.00 4.63
3110 3236 2.031069 TGAGAACGAAGACAAGGACGAG 60.031 50.000 0.00 0.00 0.00 4.18
3111 3237 1.951602 TGAGAACGAAGACAAGGACGA 59.048 47.619 0.00 0.00 0.00 4.20
3112 3238 2.417339 TGAGAACGAAGACAAGGACG 57.583 50.000 0.00 0.00 0.00 4.79
3113 3239 4.181309 AGATGAGAACGAAGACAAGGAC 57.819 45.455 0.00 0.00 0.00 3.85
3114 3240 4.873746 AAGATGAGAACGAAGACAAGGA 57.126 40.909 0.00 0.00 0.00 3.36
3115 3241 4.090642 CGAAAGATGAGAACGAAGACAAGG 59.909 45.833 0.00 0.00 0.00 3.61
3116 3242 4.917998 TCGAAAGATGAGAACGAAGACAAG 59.082 41.667 0.00 0.00 33.31 3.16
3117 3243 4.866921 TCGAAAGATGAGAACGAAGACAA 58.133 39.130 0.00 0.00 33.31 3.18
3118 3244 4.499037 TCGAAAGATGAGAACGAAGACA 57.501 40.909 0.00 0.00 33.31 3.41
3119 3245 5.824243 TTTCGAAAGATGAGAACGAAGAC 57.176 39.130 6.47 0.00 42.26 3.01
3120 3246 6.211664 GTTTTCGAAAGATGAGAACGAAGA 57.788 37.500 10.98 0.00 42.26 2.87
3137 3263 2.415512 GGTGGAGGAAGAATCGTTTTCG 59.584 50.000 0.00 0.00 45.64 3.46
3138 3264 2.415512 CGGTGGAGGAAGAATCGTTTTC 59.584 50.000 0.00 0.00 0.00 2.29
3139 3265 2.038033 TCGGTGGAGGAAGAATCGTTTT 59.962 45.455 0.00 0.00 0.00 2.43
3140 3266 1.621814 TCGGTGGAGGAAGAATCGTTT 59.378 47.619 0.00 0.00 0.00 3.60
3141 3267 1.263356 TCGGTGGAGGAAGAATCGTT 58.737 50.000 0.00 0.00 0.00 3.85
3142 3268 1.204941 CTTCGGTGGAGGAAGAATCGT 59.795 52.381 0.00 0.00 42.74 3.73
3143 3269 1.476891 TCTTCGGTGGAGGAAGAATCG 59.523 52.381 2.00 0.00 44.98 3.34
3148 3274 3.133721 AGAATCATCTTCGGTGGAGGAAG 59.866 47.826 0.00 0.00 41.74 3.46
3149 3275 3.107601 AGAATCATCTTCGGTGGAGGAA 58.892 45.455 0.00 0.00 31.46 3.36
3150 3276 2.752030 AGAATCATCTTCGGTGGAGGA 58.248 47.619 0.00 0.00 29.15 3.71
3151 3277 3.550437 AAGAATCATCTTCGGTGGAGG 57.450 47.619 0.00 0.00 42.26 4.30
3161 3287 4.277788 TGAGGAGGAGGAAGAATCATCT 57.722 45.455 0.00 0.00 36.62 2.90
3162 3288 4.592351 TGATGAGGAGGAGGAAGAATCATC 59.408 45.833 5.54 5.54 41.10 2.92
3163 3289 4.564799 TGATGAGGAGGAGGAAGAATCAT 58.435 43.478 0.00 0.00 0.00 2.45
3164 3290 3.999603 TGATGAGGAGGAGGAAGAATCA 58.000 45.455 0.00 0.00 0.00 2.57
3165 3291 4.592351 TGATGATGAGGAGGAGGAAGAATC 59.408 45.833 0.00 0.00 0.00 2.52
3166 3292 4.564799 TGATGATGAGGAGGAGGAAGAAT 58.435 43.478 0.00 0.00 0.00 2.40
3167 3293 3.966006 CTGATGATGAGGAGGAGGAAGAA 59.034 47.826 0.00 0.00 0.00 2.52
3168 3294 3.206185 TCTGATGATGAGGAGGAGGAAGA 59.794 47.826 0.00 0.00 0.00 2.87
3169 3295 3.574749 TCTGATGATGAGGAGGAGGAAG 58.425 50.000 0.00 0.00 0.00 3.46
3170 3296 3.695357 TCTGATGATGAGGAGGAGGAA 57.305 47.619 0.00 0.00 0.00 3.36
3171 3297 3.141649 TGATCTGATGATGAGGAGGAGGA 59.858 47.826 0.00 0.00 32.19 3.71
3172 3298 3.258872 GTGATCTGATGATGAGGAGGAGG 59.741 52.174 0.00 0.00 32.19 4.30
3173 3299 3.057386 CGTGATCTGATGATGAGGAGGAG 60.057 52.174 0.00 0.00 32.19 3.69
3174 3300 2.889678 CGTGATCTGATGATGAGGAGGA 59.110 50.000 0.00 0.00 32.19 3.71
3175 3301 2.627221 ACGTGATCTGATGATGAGGAGG 59.373 50.000 3.27 0.00 32.19 4.30
3176 3302 3.317430 TCACGTGATCTGATGATGAGGAG 59.683 47.826 15.76 0.00 32.19 3.69
3177 3303 3.290710 TCACGTGATCTGATGATGAGGA 58.709 45.455 15.76 0.00 32.19 3.71
3178 3304 3.722728 TCACGTGATCTGATGATGAGG 57.277 47.619 15.76 0.00 32.19 3.86
3179 3305 3.490155 GCTTCACGTGATCTGATGATGAG 59.510 47.826 20.80 10.50 32.19 2.90
3180 3306 3.131755 AGCTTCACGTGATCTGATGATGA 59.868 43.478 20.80 0.00 32.19 2.92
3181 3307 3.455327 AGCTTCACGTGATCTGATGATG 58.545 45.455 20.80 0.00 32.19 3.07
3182 3308 3.715495 GAGCTTCACGTGATCTGATGAT 58.285 45.455 20.80 4.50 35.26 2.45
3183 3309 2.478539 CGAGCTTCACGTGATCTGATGA 60.479 50.000 20.80 0.81 0.00 2.92
3184 3310 1.851053 CGAGCTTCACGTGATCTGATG 59.149 52.381 20.80 4.50 0.00 3.07
3185 3311 1.202348 CCGAGCTTCACGTGATCTGAT 60.202 52.381 20.80 11.47 0.00 2.90
3186 3312 0.171231 CCGAGCTTCACGTGATCTGA 59.829 55.000 20.80 2.90 0.00 3.27
3187 3313 2.658538 CCGAGCTTCACGTGATCTG 58.341 57.895 20.80 13.53 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.