Multiple sequence alignment - TraesCS2B01G218800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G218800 chr2B 100.000 2936 0 0 1 2936 208212847 208209912 0.000000e+00 5422.0
1 TraesCS2B01G218800 chr2B 85.870 1189 108 31 725 1875 573974524 573975690 0.000000e+00 1210.0
2 TraesCS2B01G218800 chr2B 90.517 464 41 2 1414 1875 573985068 573985530 6.960000e-171 610.0
3 TraesCS2B01G218800 chr2B 93.827 324 20 0 327 650 135770742 135771065 3.400000e-134 488.0
4 TraesCS2B01G218800 chr2B 83.058 242 21 8 1922 2149 573985877 573986112 4.960000e-48 202.0
5 TraesCS2B01G218800 chr2B 82.645 242 21 9 1922 2149 573976039 573976273 8.300000e-46 195.0
6 TraesCS2B01G218800 chr2D 96.896 1514 24 4 653 2144 148856768 148855256 0.000000e+00 2514.0
7 TraesCS2B01G218800 chr2D 87.183 749 66 16 1135 1877 490117855 490118579 0.000000e+00 824.0
8 TraesCS2B01G218800 chr2D 87.312 599 36 22 2136 2698 148816799 148816205 0.000000e+00 649.0
9 TraesCS2B01G218800 chr2D 90.909 352 6 11 1 334 148857105 148856762 1.600000e-122 449.0
10 TraesCS2B01G218800 chr2D 81.010 574 53 29 1922 2464 490118845 490119393 3.520000e-109 405.0
11 TraesCS2B01G218800 chr2D 82.143 364 32 18 724 1064 490117132 490117485 6.200000e-72 281.0
12 TraesCS2B01G218800 chr2A 93.022 1519 60 18 977 2464 153452268 153453771 0.000000e+00 2176.0
13 TraesCS2B01G218800 chr2A 92.727 330 22 1 328 657 40502633 40502306 2.650000e-130 475.0
14 TraesCS2B01G218800 chr2A 91.636 275 6 5 698 957 153451513 153451785 5.980000e-97 364.0
15 TraesCS2B01G218800 chr2A 93.213 221 11 2 2700 2916 3258299 3258079 3.650000e-84 322.0
16 TraesCS2B01G218800 chr2A 83.728 338 25 12 18 334 153451101 153451429 2.860000e-75 292.0
17 TraesCS2B01G218800 chr2A 95.349 43 2 0 653 695 153451423 153451465 5.250000e-08 69.4
18 TraesCS2B01G218800 chrUn 84.343 1188 100 49 726 1877 13023200 13024337 0.000000e+00 1085.0
19 TraesCS2B01G218800 chrUn 79.897 582 54 35 1922 2464 13024675 13025232 4.620000e-98 368.0
20 TraesCS2B01G218800 chr3D 94.081 321 19 0 330 650 210410469 210410149 3.400000e-134 488.0
21 TraesCS2B01G218800 chr7B 93.808 323 19 1 328 650 435675956 435675635 4.400000e-133 484.0
22 TraesCS2B01G218800 chr7B 93.498 323 21 0 328 650 478909547 478909869 5.690000e-132 481.0
23 TraesCS2B01G218800 chr4B 93.769 321 20 0 330 650 37726352 37726672 1.580000e-132 483.0
24 TraesCS2B01G218800 chr1B 93.293 328 21 1 330 657 24356500 24356174 1.580000e-132 483.0
25 TraesCS2B01G218800 chr1B 89.669 242 21 2 2698 2935 36922372 36922131 3.680000e-79 305.0
26 TraesCS2B01G218800 chr3B 92.793 333 20 3 330 660 397413942 397413612 2.050000e-131 479.0
27 TraesCS2B01G218800 chr3B 93.478 322 21 0 328 649 691333468 691333789 2.050000e-131 479.0
28 TraesCS2B01G218800 chr3B 90.417 240 19 2 2700 2935 30454485 30454724 2.200000e-81 313.0
29 TraesCS2B01G218800 chr7D 92.116 241 15 2 2700 2936 94089674 94089914 1.300000e-88 337.0
30 TraesCS2B01G218800 chr7D 91.286 241 16 3 2700 2936 17388051 17387812 1.010000e-84 324.0
31 TraesCS2B01G218800 chr7D 89.627 241 21 2 2700 2936 25026749 25026509 1.320000e-78 303.0
32 TraesCS2B01G218800 chr4A 90.871 241 18 2 2699 2935 670936074 670936314 1.310000e-83 320.0
33 TraesCS2B01G218800 chr3A 90.083 242 19 3 2699 2936 700297252 700297492 2.840000e-80 309.0
34 TraesCS2B01G218800 chr4D 90.041 241 19 3 2700 2936 503785448 503785209 1.020000e-79 307.0
35 TraesCS2B01G218800 chr5D 83.550 231 30 6 2465 2693 401090767 401090543 2.970000e-50 209.0
36 TraesCS2B01G218800 chr5B 84.211 209 31 2 2465 2672 16369083 16369290 4.960000e-48 202.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G218800 chr2B 208209912 208212847 2935 True 5422.000000 5422 100.000000 1 2936 1 chr2B.!!$R1 2935
1 TraesCS2B01G218800 chr2B 573974524 573976273 1749 False 702.500000 1210 84.257500 725 2149 2 chr2B.!!$F2 1424
2 TraesCS2B01G218800 chr2B 573985068 573986112 1044 False 406.000000 610 86.787500 1414 2149 2 chr2B.!!$F3 735
3 TraesCS2B01G218800 chr2D 148855256 148857105 1849 True 1481.500000 2514 93.902500 1 2144 2 chr2D.!!$R2 2143
4 TraesCS2B01G218800 chr2D 148816205 148816799 594 True 649.000000 649 87.312000 2136 2698 1 chr2D.!!$R1 562
5 TraesCS2B01G218800 chr2D 490117132 490119393 2261 False 503.333333 824 83.445333 724 2464 3 chr2D.!!$F1 1740
6 TraesCS2B01G218800 chr2A 153451101 153453771 2670 False 725.350000 2176 90.933750 18 2464 4 chr2A.!!$F1 2446
7 TraesCS2B01G218800 chrUn 13023200 13025232 2032 False 726.500000 1085 82.120000 726 2464 2 chrUn.!!$F1 1738

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
419 444 0.032267 GGTTCGGATAGGGAAGCGAG 59.968 60.0 0.0 0.0 32.96 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2262 3502 1.965643 TGTACTACCAGTCACCACCAC 59.034 52.381 0.0 0.0 0.0 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 2.533266 ACGACGATCAAAACCGGATAC 58.467 47.619 9.46 0.00 0.00 2.24
162 163 6.105333 TGCAAATTAACTGAACTTGTTGCTT 58.895 32.000 0.00 0.00 40.51 3.91
163 164 6.593382 TGCAAATTAACTGAACTTGTTGCTTT 59.407 30.769 0.00 0.00 40.51 3.51
164 165 7.761704 TGCAAATTAACTGAACTTGTTGCTTTA 59.238 29.630 0.00 0.00 40.51 1.85
200 201 5.743872 GGTAACAAAACTGAACTTGCTGAAG 59.256 40.000 0.00 0.00 35.07 3.02
213 214 2.121116 GCTGAAGCATGCATGTCATC 57.879 50.000 26.79 20.90 41.59 2.92
214 215 1.404035 GCTGAAGCATGCATGTCATCA 59.596 47.619 26.79 23.69 41.59 3.07
215 216 2.541794 GCTGAAGCATGCATGTCATCAG 60.542 50.000 31.93 31.93 41.59 2.90
296 319 0.102120 TCAGCAAACACCCGCAAAAG 59.898 50.000 0.00 0.00 0.00 2.27
334 359 1.134699 CAACGAGAGCAGATAAGGGCA 60.135 52.381 0.00 0.00 0.00 5.36
335 360 1.418334 ACGAGAGCAGATAAGGGCAT 58.582 50.000 0.00 0.00 0.00 4.40
336 361 1.069823 ACGAGAGCAGATAAGGGCATG 59.930 52.381 0.00 0.00 0.00 4.06
337 362 1.069823 CGAGAGCAGATAAGGGCATGT 59.930 52.381 0.00 0.00 0.00 3.21
338 363 2.297315 CGAGAGCAGATAAGGGCATGTA 59.703 50.000 0.00 0.00 0.00 2.29
339 364 3.658709 GAGAGCAGATAAGGGCATGTAC 58.341 50.000 0.00 0.00 0.00 2.90
340 365 3.041211 AGAGCAGATAAGGGCATGTACA 58.959 45.455 0.00 0.00 0.00 2.90
341 366 3.455910 AGAGCAGATAAGGGCATGTACAA 59.544 43.478 0.00 0.00 0.00 2.41
342 367 4.103785 AGAGCAGATAAGGGCATGTACAAT 59.896 41.667 0.00 0.00 0.00 2.71
343 368 4.139786 AGCAGATAAGGGCATGTACAATG 58.860 43.478 0.00 0.12 0.00 2.82
344 369 3.304928 GCAGATAAGGGCATGTACAATGC 60.305 47.826 17.01 17.01 43.85 3.56
345 370 3.884693 CAGATAAGGGCATGTACAATGCA 59.115 43.478 22.92 0.00 46.21 3.96
346 371 4.521639 CAGATAAGGGCATGTACAATGCAT 59.478 41.667 22.92 12.99 46.21 3.96
347 372 5.706833 CAGATAAGGGCATGTACAATGCATA 59.293 40.000 22.92 15.84 46.21 3.14
348 373 5.942236 AGATAAGGGCATGTACAATGCATAG 59.058 40.000 22.92 2.93 46.21 2.23
349 374 2.233271 AGGGCATGTACAATGCATAGC 58.767 47.619 22.92 11.42 46.21 2.97
350 375 1.270550 GGGCATGTACAATGCATAGCC 59.729 52.381 22.92 16.30 46.21 3.93
351 376 2.233271 GGCATGTACAATGCATAGCCT 58.767 47.619 22.92 0.00 46.21 4.58
352 377 2.227388 GGCATGTACAATGCATAGCCTC 59.773 50.000 22.92 7.94 46.21 4.70
353 378 2.880268 GCATGTACAATGCATAGCCTCA 59.120 45.455 19.12 0.00 44.00 3.86
354 379 3.316029 GCATGTACAATGCATAGCCTCAA 59.684 43.478 19.12 0.00 44.00 3.02
355 380 4.556104 GCATGTACAATGCATAGCCTCAAG 60.556 45.833 19.12 0.00 44.00 3.02
356 381 3.544684 TGTACAATGCATAGCCTCAAGG 58.455 45.455 0.00 0.00 38.53 3.61
357 382 2.814805 ACAATGCATAGCCTCAAGGT 57.185 45.000 0.00 0.00 37.57 3.50
358 383 2.372264 ACAATGCATAGCCTCAAGGTG 58.628 47.619 0.00 0.00 37.57 4.00
359 384 2.025981 ACAATGCATAGCCTCAAGGTGA 60.026 45.455 0.00 0.00 37.57 4.02
360 385 3.220110 CAATGCATAGCCTCAAGGTGAT 58.780 45.455 0.00 0.00 37.57 3.06
361 386 2.336945 TGCATAGCCTCAAGGTGATG 57.663 50.000 0.00 3.41 37.57 3.07
362 387 0.950116 GCATAGCCTCAAGGTGATGC 59.050 55.000 16.47 16.47 43.18 3.91
363 388 1.602311 CATAGCCTCAAGGTGATGCC 58.398 55.000 0.00 0.00 38.54 4.40
377 402 2.588989 TGCCTCGCATGCCATGTA 59.411 55.556 13.15 0.00 31.71 2.29
378 403 1.524393 TGCCTCGCATGCCATGTAG 60.524 57.895 13.15 4.55 31.71 2.74
379 404 2.256591 GCCTCGCATGCCATGTAGG 61.257 63.158 18.53 18.53 38.09 3.18
380 405 1.447217 CCTCGCATGCCATGTAGGA 59.553 57.895 18.19 8.22 41.22 2.94
381 406 0.035881 CCTCGCATGCCATGTAGGAT 59.964 55.000 18.19 0.00 41.22 3.24
382 407 1.436600 CTCGCATGCCATGTAGGATC 58.563 55.000 13.15 0.00 41.22 3.36
383 408 0.319813 TCGCATGCCATGTAGGATCG 60.320 55.000 13.15 0.23 41.22 3.69
384 409 1.293963 CGCATGCCATGTAGGATCGG 61.294 60.000 13.15 0.00 41.22 4.18
385 410 0.035317 GCATGCCATGTAGGATCGGA 59.965 55.000 6.36 0.00 41.22 4.55
386 411 1.339438 GCATGCCATGTAGGATCGGAT 60.339 52.381 6.36 0.00 41.22 4.18
387 412 2.093500 GCATGCCATGTAGGATCGGATA 60.093 50.000 6.36 0.00 41.22 2.59
388 413 3.432749 GCATGCCATGTAGGATCGGATAT 60.433 47.826 6.36 0.00 41.22 1.63
389 414 3.893326 TGCCATGTAGGATCGGATATG 57.107 47.619 0.00 0.00 41.22 1.78
390 415 3.440127 TGCCATGTAGGATCGGATATGA 58.560 45.455 0.00 0.00 41.22 2.15
391 416 3.195610 TGCCATGTAGGATCGGATATGAC 59.804 47.826 0.00 0.00 41.22 3.06
392 417 3.735208 GCCATGTAGGATCGGATATGACG 60.735 52.174 0.00 0.00 41.22 4.35
393 418 3.444034 CCATGTAGGATCGGATATGACGT 59.556 47.826 0.00 0.00 41.22 4.34
394 419 4.638865 CCATGTAGGATCGGATATGACGTA 59.361 45.833 0.00 0.00 41.22 3.57
395 420 5.124936 CCATGTAGGATCGGATATGACGTAA 59.875 44.000 0.00 0.00 41.22 3.18
396 421 6.349860 CCATGTAGGATCGGATATGACGTAAA 60.350 42.308 0.00 0.00 41.22 2.01
397 422 6.250344 TGTAGGATCGGATATGACGTAAAG 57.750 41.667 0.00 0.00 0.00 1.85
398 423 5.766670 TGTAGGATCGGATATGACGTAAAGT 59.233 40.000 0.00 0.00 0.00 2.66
399 424 6.936335 TGTAGGATCGGATATGACGTAAAGTA 59.064 38.462 0.00 0.00 0.00 2.24
400 425 6.497785 AGGATCGGATATGACGTAAAGTAG 57.502 41.667 0.00 0.00 0.00 2.57
401 426 5.415077 AGGATCGGATATGACGTAAAGTAGG 59.585 44.000 0.00 0.00 0.00 3.18
402 427 5.182760 GGATCGGATATGACGTAAAGTAGGT 59.817 44.000 0.00 0.00 0.00 3.08
403 428 6.294397 GGATCGGATATGACGTAAAGTAGGTT 60.294 42.308 0.00 0.00 0.00 3.50
404 429 6.064846 TCGGATATGACGTAAAGTAGGTTC 57.935 41.667 0.00 0.00 0.00 3.62
405 430 4.908156 CGGATATGACGTAAAGTAGGTTCG 59.092 45.833 0.00 0.00 0.00 3.95
406 431 5.218139 GGATATGACGTAAAGTAGGTTCGG 58.782 45.833 0.00 0.00 0.00 4.30
407 432 5.009010 GGATATGACGTAAAGTAGGTTCGGA 59.991 44.000 0.00 0.00 0.00 4.55
408 433 4.996788 ATGACGTAAAGTAGGTTCGGAT 57.003 40.909 0.00 0.00 0.00 4.18
409 434 7.094634 GGATATGACGTAAAGTAGGTTCGGATA 60.095 40.741 0.00 0.00 0.00 2.59
410 435 5.490139 TGACGTAAAGTAGGTTCGGATAG 57.510 43.478 0.00 0.00 0.00 2.08
411 436 4.336433 TGACGTAAAGTAGGTTCGGATAGG 59.664 45.833 0.00 0.00 0.00 2.57
412 437 3.633986 ACGTAAAGTAGGTTCGGATAGGG 59.366 47.826 0.00 0.00 0.00 3.53
413 438 3.885297 CGTAAAGTAGGTTCGGATAGGGA 59.115 47.826 0.00 0.00 0.00 4.20
414 439 4.339247 CGTAAAGTAGGTTCGGATAGGGAA 59.661 45.833 0.00 0.00 0.00 3.97
415 440 5.506982 CGTAAAGTAGGTTCGGATAGGGAAG 60.507 48.000 0.00 0.00 0.00 3.46
416 441 2.317973 AGTAGGTTCGGATAGGGAAGC 58.682 52.381 0.00 0.00 41.06 3.86
417 442 1.000496 GTAGGTTCGGATAGGGAAGCG 60.000 57.143 0.00 0.00 44.35 4.68
418 443 0.396695 AGGTTCGGATAGGGAAGCGA 60.397 55.000 0.00 0.00 44.35 4.93
419 444 0.032267 GGTTCGGATAGGGAAGCGAG 59.968 60.000 0.00 0.00 32.96 5.03
420 445 1.030457 GTTCGGATAGGGAAGCGAGA 58.970 55.000 0.00 0.00 0.00 4.04
421 446 1.614413 GTTCGGATAGGGAAGCGAGAT 59.386 52.381 0.00 0.00 0.00 2.75
422 447 1.535833 TCGGATAGGGAAGCGAGATC 58.464 55.000 0.00 0.00 0.00 2.75
423 448 1.074084 TCGGATAGGGAAGCGAGATCT 59.926 52.381 0.00 0.00 0.00 2.75
424 449 1.889829 CGGATAGGGAAGCGAGATCTT 59.110 52.381 0.00 0.00 0.00 2.40
425 450 2.094957 CGGATAGGGAAGCGAGATCTTC 60.095 54.545 0.00 0.00 41.21 2.87
426 451 3.161866 GGATAGGGAAGCGAGATCTTCT 58.838 50.000 0.00 0.00 41.55 2.85
427 452 3.192633 GGATAGGGAAGCGAGATCTTCTC 59.807 52.174 0.00 0.00 42.47 2.87
428 453 2.151502 AGGGAAGCGAGATCTTCTCA 57.848 50.000 0.00 0.00 44.12 3.27
429 454 2.461695 AGGGAAGCGAGATCTTCTCAA 58.538 47.619 0.00 0.00 44.12 3.02
430 455 2.430332 AGGGAAGCGAGATCTTCTCAAG 59.570 50.000 0.00 0.00 44.12 3.02
431 456 2.482839 GGGAAGCGAGATCTTCTCAAGG 60.483 54.545 0.00 0.00 43.55 3.61
432 457 2.428890 GGAAGCGAGATCTTCTCAAGGA 59.571 50.000 0.00 0.00 43.55 3.36
433 458 3.490761 GGAAGCGAGATCTTCTCAAGGAG 60.491 52.174 0.00 0.00 43.55 3.69
434 459 2.031120 AGCGAGATCTTCTCAAGGAGG 58.969 52.381 0.00 0.00 43.55 4.30
435 460 1.537990 GCGAGATCTTCTCAAGGAGGC 60.538 57.143 0.00 0.00 43.55 4.70
436 461 1.753649 CGAGATCTTCTCAAGGAGGCA 59.246 52.381 0.00 0.00 43.55 4.75
437 462 2.223782 CGAGATCTTCTCAAGGAGGCAG 60.224 54.545 0.00 0.00 43.55 4.85
438 463 2.102925 GAGATCTTCTCAAGGAGGCAGG 59.897 54.545 0.00 0.00 42.90 4.85
439 464 1.836802 GATCTTCTCAAGGAGGCAGGT 59.163 52.381 0.00 0.00 0.00 4.00
440 465 0.979665 TCTTCTCAAGGAGGCAGGTG 59.020 55.000 0.00 0.00 0.00 4.00
441 466 0.689623 CTTCTCAAGGAGGCAGGTGT 59.310 55.000 0.00 0.00 0.00 4.16
442 467 1.072965 CTTCTCAAGGAGGCAGGTGTT 59.927 52.381 0.00 0.00 0.00 3.32
443 468 1.140312 TCTCAAGGAGGCAGGTGTTT 58.860 50.000 0.00 0.00 0.00 2.83
444 469 1.202806 TCTCAAGGAGGCAGGTGTTTG 60.203 52.381 0.00 0.00 0.00 2.93
445 470 0.843309 TCAAGGAGGCAGGTGTTTGA 59.157 50.000 0.00 0.00 0.00 2.69
446 471 1.214175 TCAAGGAGGCAGGTGTTTGAA 59.786 47.619 0.00 0.00 0.00 2.69
447 472 1.610522 CAAGGAGGCAGGTGTTTGAAG 59.389 52.381 0.00 0.00 0.00 3.02
448 473 1.140312 AGGAGGCAGGTGTTTGAAGA 58.860 50.000 0.00 0.00 0.00 2.87
449 474 1.072965 AGGAGGCAGGTGTTTGAAGAG 59.927 52.381 0.00 0.00 0.00 2.85
450 475 1.072331 GGAGGCAGGTGTTTGAAGAGA 59.928 52.381 0.00 0.00 0.00 3.10
451 476 2.487265 GGAGGCAGGTGTTTGAAGAGAA 60.487 50.000 0.00 0.00 0.00 2.87
452 477 3.214328 GAGGCAGGTGTTTGAAGAGAAA 58.786 45.455 0.00 0.00 0.00 2.52
453 478 3.631250 AGGCAGGTGTTTGAAGAGAAAA 58.369 40.909 0.00 0.00 0.00 2.29
454 479 4.023291 AGGCAGGTGTTTGAAGAGAAAAA 58.977 39.130 0.00 0.00 0.00 1.94
455 480 4.098501 AGGCAGGTGTTTGAAGAGAAAAAG 59.901 41.667 0.00 0.00 0.00 2.27
456 481 4.142160 GGCAGGTGTTTGAAGAGAAAAAGT 60.142 41.667 0.00 0.00 0.00 2.66
457 482 4.800471 GCAGGTGTTTGAAGAGAAAAAGTG 59.200 41.667 0.00 0.00 0.00 3.16
458 483 5.622233 GCAGGTGTTTGAAGAGAAAAAGTGT 60.622 40.000 0.00 0.00 0.00 3.55
459 484 5.801947 CAGGTGTTTGAAGAGAAAAAGTGTG 59.198 40.000 0.00 0.00 0.00 3.82
460 485 5.102313 GGTGTTTGAAGAGAAAAAGTGTGG 58.898 41.667 0.00 0.00 0.00 4.17
461 486 5.336451 GGTGTTTGAAGAGAAAAAGTGTGGT 60.336 40.000 0.00 0.00 0.00 4.16
462 487 5.800438 GTGTTTGAAGAGAAAAAGTGTGGTC 59.200 40.000 0.00 0.00 0.00 4.02
463 488 5.105917 TGTTTGAAGAGAAAAAGTGTGGTCC 60.106 40.000 0.00 0.00 0.00 4.46
464 489 3.202906 TGAAGAGAAAAAGTGTGGTCCG 58.797 45.455 0.00 0.00 0.00 4.79
465 490 2.256117 AGAGAAAAAGTGTGGTCCGG 57.744 50.000 0.00 0.00 0.00 5.14
466 491 1.489230 AGAGAAAAAGTGTGGTCCGGT 59.511 47.619 0.00 0.00 0.00 5.28
467 492 1.602377 GAGAAAAAGTGTGGTCCGGTG 59.398 52.381 0.00 0.00 0.00 4.94
468 493 1.210967 AGAAAAAGTGTGGTCCGGTGA 59.789 47.619 0.00 0.00 0.00 4.02
469 494 1.332686 GAAAAAGTGTGGTCCGGTGAC 59.667 52.381 0.00 0.00 40.98 3.67
470 495 0.253610 AAAAGTGTGGTCCGGTGACA 59.746 50.000 0.00 0.00 43.65 3.58
471 496 0.253610 AAAGTGTGGTCCGGTGACAA 59.746 50.000 0.00 0.00 43.65 3.18
472 497 0.253610 AAGTGTGGTCCGGTGACAAA 59.746 50.000 0.00 0.00 43.65 2.83
473 498 0.253610 AGTGTGGTCCGGTGACAAAA 59.746 50.000 0.00 0.00 43.65 2.44
474 499 1.096416 GTGTGGTCCGGTGACAAAAA 58.904 50.000 0.00 0.00 43.65 1.94
475 500 1.096416 TGTGGTCCGGTGACAAAAAC 58.904 50.000 0.00 0.00 43.65 2.43
476 501 1.340211 TGTGGTCCGGTGACAAAAACT 60.340 47.619 0.00 0.00 43.65 2.66
477 502 1.064952 GTGGTCCGGTGACAAAAACTG 59.935 52.381 0.00 0.00 43.65 3.16
478 503 1.065345 TGGTCCGGTGACAAAAACTGA 60.065 47.619 0.00 0.00 43.65 3.41
479 504 2.018515 GGTCCGGTGACAAAAACTGAA 58.981 47.619 0.00 0.00 43.65 3.02
480 505 2.424246 GGTCCGGTGACAAAAACTGAAA 59.576 45.455 0.00 0.00 43.65 2.69
481 506 3.119424 GGTCCGGTGACAAAAACTGAAAA 60.119 43.478 0.00 0.00 43.65 2.29
482 507 4.102649 GTCCGGTGACAAAAACTGAAAAG 58.897 43.478 0.00 0.00 41.37 2.27
483 508 3.129638 TCCGGTGACAAAAACTGAAAAGG 59.870 43.478 0.00 0.00 0.00 3.11
484 509 3.119280 CCGGTGACAAAAACTGAAAAGGT 60.119 43.478 0.00 0.00 0.00 3.50
485 510 4.490743 CGGTGACAAAAACTGAAAAGGTT 58.509 39.130 0.00 0.00 0.00 3.50
486 511 4.326009 CGGTGACAAAAACTGAAAAGGTTG 59.674 41.667 0.00 0.00 0.00 3.77
487 512 4.629634 GGTGACAAAAACTGAAAAGGTTGG 59.370 41.667 0.00 0.00 0.00 3.77
488 513 5.474825 GTGACAAAAACTGAAAAGGTTGGA 58.525 37.500 0.00 0.00 0.00 3.53
489 514 5.576774 GTGACAAAAACTGAAAAGGTTGGAG 59.423 40.000 0.00 0.00 0.00 3.86
490 515 5.245075 TGACAAAAACTGAAAAGGTTGGAGT 59.755 36.000 0.00 0.00 0.00 3.85
491 516 5.478407 ACAAAAACTGAAAAGGTTGGAGTG 58.522 37.500 0.00 0.00 0.00 3.51
492 517 5.245075 ACAAAAACTGAAAAGGTTGGAGTGA 59.755 36.000 0.00 0.00 0.00 3.41
493 518 5.993748 AAAACTGAAAAGGTTGGAGTGAA 57.006 34.783 0.00 0.00 0.00 3.18
494 519 5.993748 AAACTGAAAAGGTTGGAGTGAAA 57.006 34.783 0.00 0.00 0.00 2.69
495 520 5.993748 AACTGAAAAGGTTGGAGTGAAAA 57.006 34.783 0.00 0.00 0.00 2.29
496 521 5.582689 ACTGAAAAGGTTGGAGTGAAAAG 57.417 39.130 0.00 0.00 0.00 2.27
497 522 5.016831 ACTGAAAAGGTTGGAGTGAAAAGT 58.983 37.500 0.00 0.00 0.00 2.66
498 523 6.184789 ACTGAAAAGGTTGGAGTGAAAAGTA 58.815 36.000 0.00 0.00 0.00 2.24
499 524 6.661805 ACTGAAAAGGTTGGAGTGAAAAGTAA 59.338 34.615 0.00 0.00 0.00 2.24
500 525 7.177744 ACTGAAAAGGTTGGAGTGAAAAGTAAA 59.822 33.333 0.00 0.00 0.00 2.01
501 526 7.543756 TGAAAAGGTTGGAGTGAAAAGTAAAG 58.456 34.615 0.00 0.00 0.00 1.85
502 527 7.394923 TGAAAAGGTTGGAGTGAAAAGTAAAGA 59.605 33.333 0.00 0.00 0.00 2.52
503 528 7.898014 AAAGGTTGGAGTGAAAAGTAAAGAT 57.102 32.000 0.00 0.00 0.00 2.40
504 529 6.884280 AGGTTGGAGTGAAAAGTAAAGATG 57.116 37.500 0.00 0.00 0.00 2.90
505 530 5.241728 AGGTTGGAGTGAAAAGTAAAGATGC 59.758 40.000 0.00 0.00 0.00 3.91
506 531 5.009610 GGTTGGAGTGAAAAGTAAAGATGCA 59.990 40.000 0.00 0.00 0.00 3.96
507 532 6.294731 GGTTGGAGTGAAAAGTAAAGATGCAT 60.295 38.462 0.00 0.00 0.00 3.96
508 533 7.094377 GGTTGGAGTGAAAAGTAAAGATGCATA 60.094 37.037 0.00 0.00 0.00 3.14
509 534 8.462016 GTTGGAGTGAAAAGTAAAGATGCATAT 58.538 33.333 0.00 0.00 0.00 1.78
510 535 9.679661 TTGGAGTGAAAAGTAAAGATGCATATA 57.320 29.630 0.00 0.00 0.00 0.86
511 536 9.851686 TGGAGTGAAAAGTAAAGATGCATATAT 57.148 29.630 0.00 0.00 0.00 0.86
553 578 9.984590 TTTTATTTCTTAATTAGGCCCACTAGT 57.015 29.630 0.00 0.00 32.16 2.57
554 579 8.974060 TTATTTCTTAATTAGGCCCACTAGTG 57.026 34.615 16.34 16.34 32.16 2.74
568 593 3.941483 CCACTAGTGGTAGCTTTCATTGG 59.059 47.826 30.57 2.86 45.53 3.16
569 594 3.941483 CACTAGTGGTAGCTTTCATTGGG 59.059 47.826 15.49 0.00 0.00 4.12
570 595 2.514458 AGTGGTAGCTTTCATTGGGG 57.486 50.000 0.00 0.00 0.00 4.96
571 596 1.992557 AGTGGTAGCTTTCATTGGGGA 59.007 47.619 0.00 0.00 0.00 4.81
572 597 2.025887 AGTGGTAGCTTTCATTGGGGAG 60.026 50.000 0.00 0.00 0.00 4.30
573 598 2.026262 GTGGTAGCTTTCATTGGGGAGA 60.026 50.000 0.00 0.00 0.00 3.71
574 599 2.647299 TGGTAGCTTTCATTGGGGAGAA 59.353 45.455 0.00 0.00 0.00 2.87
575 600 3.075283 TGGTAGCTTTCATTGGGGAGAAA 59.925 43.478 0.00 0.00 33.17 2.52
576 601 4.086457 GGTAGCTTTCATTGGGGAGAAAA 58.914 43.478 0.00 0.00 33.75 2.29
577 602 4.526650 GGTAGCTTTCATTGGGGAGAAAAA 59.473 41.667 0.00 0.00 33.75 1.94
601 626 9.869757 AAAATAAATGTAGGTGCCTCAAATTAC 57.130 29.630 0.00 0.00 0.00 1.89
602 627 8.823220 AATAAATGTAGGTGCCTCAAATTACT 57.177 30.769 0.00 0.00 0.00 2.24
603 628 8.823220 ATAAATGTAGGTGCCTCAAATTACTT 57.177 30.769 0.00 0.00 0.00 2.24
604 629 7.539034 AAATGTAGGTGCCTCAAATTACTTT 57.461 32.000 0.00 0.00 0.00 2.66
605 630 7.539034 AATGTAGGTGCCTCAAATTACTTTT 57.461 32.000 0.00 0.00 0.00 2.27
606 631 6.969993 TGTAGGTGCCTCAAATTACTTTTT 57.030 33.333 0.00 0.00 0.00 1.94
607 632 6.744112 TGTAGGTGCCTCAAATTACTTTTTG 58.256 36.000 0.00 0.00 37.83 2.44
608 633 5.869649 AGGTGCCTCAAATTACTTTTTGT 57.130 34.783 0.00 0.00 37.73 2.83
609 634 5.842907 AGGTGCCTCAAATTACTTTTTGTC 58.157 37.500 0.00 0.00 37.73 3.18
610 635 4.679654 GGTGCCTCAAATTACTTTTTGTCG 59.320 41.667 0.00 0.00 37.73 4.35
611 636 5.278604 GTGCCTCAAATTACTTTTTGTCGT 58.721 37.500 0.00 0.00 37.73 4.34
612 637 5.173131 GTGCCTCAAATTACTTTTTGTCGTG 59.827 40.000 0.00 0.00 37.73 4.35
613 638 5.066634 TGCCTCAAATTACTTTTTGTCGTGA 59.933 36.000 0.00 0.00 37.73 4.35
614 639 5.974751 GCCTCAAATTACTTTTTGTCGTGAA 59.025 36.000 0.00 0.00 37.73 3.18
615 640 6.142320 GCCTCAAATTACTTTTTGTCGTGAAG 59.858 38.462 0.00 0.00 37.73 3.02
616 641 6.142320 CCTCAAATTACTTTTTGTCGTGAAGC 59.858 38.462 0.00 0.00 37.73 3.86
617 642 6.556212 TCAAATTACTTTTTGTCGTGAAGCA 58.444 32.000 0.00 0.00 37.73 3.91
618 643 7.199766 TCAAATTACTTTTTGTCGTGAAGCAT 58.800 30.769 0.00 0.00 37.73 3.79
619 644 8.346300 TCAAATTACTTTTTGTCGTGAAGCATA 58.654 29.630 0.00 0.00 37.73 3.14
620 645 9.128107 CAAATTACTTTTTGTCGTGAAGCATAT 57.872 29.630 0.00 0.00 32.99 1.78
621 646 8.673626 AATTACTTTTTGTCGTGAAGCATATG 57.326 30.769 0.00 0.00 0.00 1.78
622 647 5.689383 ACTTTTTGTCGTGAAGCATATGT 57.311 34.783 4.29 0.00 0.00 2.29
623 648 6.795098 ACTTTTTGTCGTGAAGCATATGTA 57.205 33.333 4.29 0.00 0.00 2.29
624 649 7.377766 ACTTTTTGTCGTGAAGCATATGTAT 57.622 32.000 4.29 0.00 0.00 2.29
625 650 7.464358 ACTTTTTGTCGTGAAGCATATGTATC 58.536 34.615 4.29 3.94 0.00 2.24
626 651 5.984233 TTTGTCGTGAAGCATATGTATCC 57.016 39.130 4.29 0.00 0.00 2.59
627 652 4.664150 TGTCGTGAAGCATATGTATCCA 57.336 40.909 4.29 0.00 0.00 3.41
628 653 5.213891 TGTCGTGAAGCATATGTATCCAT 57.786 39.130 4.29 0.00 34.97 3.41
629 654 6.339587 TGTCGTGAAGCATATGTATCCATA 57.660 37.500 4.29 0.00 37.92 2.74
630 655 6.935167 TGTCGTGAAGCATATGTATCCATAT 58.065 36.000 4.29 0.00 43.54 1.78
643 668 7.870509 ATGTATCCATATGCCATCATTGTAC 57.129 36.000 0.00 0.00 34.22 2.90
644 669 6.777782 TGTATCCATATGCCATCATTGTACA 58.222 36.000 0.00 0.00 34.22 2.90
645 670 7.404481 TGTATCCATATGCCATCATTGTACAT 58.596 34.615 0.00 0.00 34.22 2.29
646 671 6.769134 ATCCATATGCCATCATTGTACATG 57.231 37.500 0.00 0.00 34.22 3.21
647 672 4.460034 TCCATATGCCATCATTGTACATGC 59.540 41.667 0.00 0.00 34.22 4.06
648 673 4.381185 CCATATGCCATCATTGTACATGCC 60.381 45.833 0.00 0.00 34.22 4.40
649 674 1.401761 TGCCATCATTGTACATGCCC 58.598 50.000 0.00 0.00 0.00 5.36
650 675 0.675633 GCCATCATTGTACATGCCCC 59.324 55.000 0.00 0.00 0.00 5.80
651 676 1.331214 CCATCATTGTACATGCCCCC 58.669 55.000 0.00 0.00 0.00 5.40
652 677 1.133388 CCATCATTGTACATGCCCCCT 60.133 52.381 0.00 0.00 0.00 4.79
653 678 2.108075 CCATCATTGTACATGCCCCCTA 59.892 50.000 0.00 0.00 0.00 3.53
654 679 3.436325 CCATCATTGTACATGCCCCCTAA 60.436 47.826 0.00 0.00 0.00 2.69
655 680 4.214310 CATCATTGTACATGCCCCCTAAA 58.786 43.478 0.00 0.00 0.00 1.85
656 681 3.897239 TCATTGTACATGCCCCCTAAAG 58.103 45.455 0.00 0.00 0.00 1.85
657 682 2.818751 TTGTACATGCCCCCTAAAGG 57.181 50.000 0.00 0.00 0.00 3.11
1067 1629 3.860125 CGCGGCCAATGGTACGTG 61.860 66.667 16.90 15.96 32.16 4.49
1600 2476 1.867233 GCGCCGTACATCATCAATTCT 59.133 47.619 0.00 0.00 0.00 2.40
1689 2567 4.361971 ACCGAGGAGGAGGTGCGA 62.362 66.667 0.00 0.00 45.00 5.10
1956 3161 4.218635 TGATATTGAGACGAGCTGGGTATC 59.781 45.833 0.00 1.46 0.00 2.24
1957 3162 1.847328 TTGAGACGAGCTGGGTATCA 58.153 50.000 7.53 7.53 34.15 2.15
1958 3163 1.103803 TGAGACGAGCTGGGTATCAC 58.896 55.000 7.53 0.00 31.29 3.06
1959 3164 1.341089 TGAGACGAGCTGGGTATCACT 60.341 52.381 7.53 0.00 31.29 3.41
1960 3165 2.092592 TGAGACGAGCTGGGTATCACTA 60.093 50.000 7.53 0.00 31.29 2.74
1961 3166 3.150767 GAGACGAGCTGGGTATCACTAT 58.849 50.000 0.00 0.00 0.00 2.12
1967 3172 4.202161 CGAGCTGGGTATCACTATCAACTT 60.202 45.833 0.00 0.00 0.00 2.66
2180 3407 5.248477 TCAGCAGTAAATAGTCTTCTTGGGT 59.752 40.000 0.00 0.00 0.00 4.51
2181 3408 6.439375 TCAGCAGTAAATAGTCTTCTTGGGTA 59.561 38.462 0.00 0.00 0.00 3.69
2213 3450 6.986817 GCTAGTTGGCAATCATCTTAACTAGA 59.013 38.462 20.10 0.00 45.02 2.43
2244 3481 5.620654 GCTGCTGCATTGTTCTAAATGAAGA 60.621 40.000 11.11 0.00 43.43 2.87
2265 3505 9.511272 TGAAGATCTAAATATTGATGATGGTGG 57.489 33.333 0.00 0.00 0.00 4.61
2272 3515 2.198827 TTGATGATGGTGGTGGTGAC 57.801 50.000 0.00 0.00 0.00 3.67
2273 3516 1.361204 TGATGATGGTGGTGGTGACT 58.639 50.000 0.00 0.00 0.00 3.41
2274 3517 1.003464 TGATGATGGTGGTGGTGACTG 59.997 52.381 0.00 0.00 0.00 3.51
2275 3518 0.329261 ATGATGGTGGTGGTGACTGG 59.671 55.000 0.00 0.00 0.00 4.00
2401 3695 3.188786 GGCCACTGCGCTCTTACG 61.189 66.667 9.73 0.00 38.85 3.18
2503 3804 1.766496 TGTCCCGAGTTCCAAGACTTT 59.234 47.619 0.00 0.00 0.00 2.66
2507 3808 1.593196 CGAGTTCCAAGACTTTGCCA 58.407 50.000 0.00 0.00 32.79 4.92
2520 3821 6.749923 AGACTTTGCCAAGTTCATTCTATC 57.250 37.500 4.46 0.00 43.79 2.08
2521 3822 6.479884 AGACTTTGCCAAGTTCATTCTATCT 58.520 36.000 4.46 0.00 43.79 1.98
2522 3823 7.624549 AGACTTTGCCAAGTTCATTCTATCTA 58.375 34.615 4.46 0.00 43.79 1.98
2535 3836 4.548991 TTCTATCTAGAACTCGGCGAAC 57.451 45.455 12.13 5.66 37.40 3.95
2540 3841 2.161808 TCTAGAACTCGGCGAACTTCTG 59.838 50.000 27.38 20.13 0.00 3.02
2556 3857 2.839486 TCTGTCTGCCGAGTTTGATT 57.161 45.000 0.00 0.00 0.00 2.57
2557 3858 2.688507 TCTGTCTGCCGAGTTTGATTC 58.311 47.619 0.00 0.00 0.00 2.52
2558 3859 2.037121 TCTGTCTGCCGAGTTTGATTCA 59.963 45.455 0.00 0.00 0.00 2.57
2564 3865 4.761739 TCTGCCGAGTTTGATTCAAAATCT 59.238 37.500 27.31 16.40 43.37 2.40
2569 3870 6.310197 CCGAGTTTGATTCAAAATCTGACTC 58.690 40.000 27.31 20.26 43.37 3.36
2592 3893 3.309675 CGATAAGCAACTCGGCGG 58.690 61.111 7.21 0.00 39.27 6.13
2624 3926 2.293122 TGCCAGGTTCTGATGAAAAACG 59.707 45.455 0.00 0.00 32.44 3.60
2626 3928 3.191371 GCCAGGTTCTGATGAAAAACGAT 59.809 43.478 0.00 0.00 32.44 3.73
2628 3930 5.393962 CCAGGTTCTGATGAAAAACGATTC 58.606 41.667 0.00 0.00 32.44 2.52
2630 3932 4.994852 AGGTTCTGATGAAAAACGATTCGA 59.005 37.500 13.95 0.00 33.52 3.71
2635 3937 5.347635 TCTGATGAAAAACGATTCGACGAAT 59.652 36.000 22.47 22.47 34.71 3.34
2649 3951 5.009048 TCGACGAATAAACAAAAACTCGG 57.991 39.130 0.00 0.00 0.00 4.63
2652 3954 4.922719 ACGAATAAACAAAAACTCGGCAA 58.077 34.783 0.00 0.00 0.00 4.52
2656 3958 7.010645 ACGAATAAACAAAAACTCGGCAAAATT 59.989 29.630 0.00 0.00 0.00 1.82
2664 3966 6.763303 AAAACTCGGCAAAATTACATGTTC 57.237 33.333 2.30 0.00 0.00 3.18
2665 3967 5.446143 AACTCGGCAAAATTACATGTTCA 57.554 34.783 2.30 0.00 0.00 3.18
2695 3997 2.579878 TCGAAAGAGACTCGGCCAT 58.420 52.632 2.24 0.00 36.93 4.40
2698 4000 2.693591 TCGAAAGAGACTCGGCCATAAT 59.306 45.455 2.24 0.00 36.93 1.28
2699 4001 3.053455 CGAAAGAGACTCGGCCATAATC 58.947 50.000 2.24 0.00 32.62 1.75
2700 4002 3.490933 CGAAAGAGACTCGGCCATAATCA 60.491 47.826 2.24 0.00 32.62 2.57
2701 4003 3.460857 AAGAGACTCGGCCATAATCAC 57.539 47.619 2.24 0.00 0.00 3.06
2702 4004 2.672098 AGAGACTCGGCCATAATCACT 58.328 47.619 2.24 0.00 0.00 3.41
2703 4005 3.833732 AGAGACTCGGCCATAATCACTA 58.166 45.455 2.24 0.00 0.00 2.74
2704 4006 3.570550 AGAGACTCGGCCATAATCACTAC 59.429 47.826 2.24 0.00 0.00 2.73
2705 4007 3.567397 AGACTCGGCCATAATCACTACT 58.433 45.455 2.24 0.00 0.00 2.57
2706 4008 3.319405 AGACTCGGCCATAATCACTACTG 59.681 47.826 2.24 0.00 0.00 2.74
2707 4009 2.365617 ACTCGGCCATAATCACTACTGG 59.634 50.000 2.24 0.00 0.00 4.00
2708 4010 2.628178 CTCGGCCATAATCACTACTGGA 59.372 50.000 2.24 0.00 0.00 3.86
2709 4011 3.035363 TCGGCCATAATCACTACTGGAA 58.965 45.455 2.24 0.00 0.00 3.53
2710 4012 3.646162 TCGGCCATAATCACTACTGGAAT 59.354 43.478 2.24 0.00 0.00 3.01
2711 4013 4.102524 TCGGCCATAATCACTACTGGAATT 59.897 41.667 2.24 0.00 0.00 2.17
2712 4014 4.821805 CGGCCATAATCACTACTGGAATTT 59.178 41.667 2.24 0.00 0.00 1.82
2713 4015 5.299279 CGGCCATAATCACTACTGGAATTTT 59.701 40.000 2.24 0.00 0.00 1.82
2714 4016 6.513393 CGGCCATAATCACTACTGGAATTTTC 60.513 42.308 2.24 0.00 0.00 2.29
2726 4028 3.494045 GGAATTTTCCTCTTTGCCGAG 57.506 47.619 1.97 0.00 44.11 4.63
2727 4029 2.820197 GGAATTTTCCTCTTTGCCGAGT 59.180 45.455 1.97 0.00 44.11 4.18
2728 4030 3.366374 GGAATTTTCCTCTTTGCCGAGTG 60.366 47.826 1.97 0.00 44.11 3.51
2729 4031 2.341846 TTTTCCTCTTTGCCGAGTGT 57.658 45.000 0.00 0.00 0.00 3.55
2730 4032 2.341846 TTTCCTCTTTGCCGAGTGTT 57.658 45.000 0.00 0.00 0.00 3.32
2731 4033 3.478857 TTTCCTCTTTGCCGAGTGTTA 57.521 42.857 0.00 0.00 0.00 2.41
2732 4034 2.743636 TCCTCTTTGCCGAGTGTTAG 57.256 50.000 0.00 0.00 0.00 2.34
2733 4035 1.275291 TCCTCTTTGCCGAGTGTTAGG 59.725 52.381 0.00 0.00 0.00 2.69
2741 4043 1.079503 CCGAGTGTTAGGCTCTTTGC 58.920 55.000 0.00 0.00 41.94 3.68
2759 4061 2.605094 CCGAGTGCATTATGTCGGG 58.395 57.895 12.94 2.97 46.68 5.14
2760 4062 1.498865 CCGAGTGCATTATGTCGGGC 61.499 60.000 12.94 0.00 46.68 6.13
2761 4063 0.809636 CGAGTGCATTATGTCGGGCA 60.810 55.000 0.00 0.00 0.00 5.36
2764 4066 3.079131 TGCATTATGTCGGGCACTC 57.921 52.632 0.00 0.00 0.00 3.51
2765 4067 0.809636 TGCATTATGTCGGGCACTCG 60.810 55.000 0.00 0.00 0.00 4.18
2766 4068 1.498865 GCATTATGTCGGGCACTCGG 61.499 60.000 0.00 0.00 0.00 4.63
2767 4069 1.227556 ATTATGTCGGGCACTCGGC 60.228 57.895 0.00 0.00 43.74 5.54
2780 4082 4.458951 GCACTCGGCAATACTATCTTTG 57.541 45.455 0.00 0.00 43.97 2.77
2781 4083 3.303395 GCACTCGGCAATACTATCTTTGC 60.303 47.826 0.00 0.00 45.82 3.68
2788 4090 5.577860 GCAATACTATCTTTGCCGAGTAC 57.422 43.478 0.00 0.00 41.82 2.73
2789 4091 4.448060 GCAATACTATCTTTGCCGAGTACC 59.552 45.833 0.00 0.00 41.82 3.34
2790 4092 5.739358 GCAATACTATCTTTGCCGAGTACCT 60.739 44.000 0.00 0.00 41.82 3.08
2791 4093 6.516194 GCAATACTATCTTTGCCGAGTACCTA 60.516 42.308 0.00 0.00 41.82 3.08
2792 4094 7.431249 CAATACTATCTTTGCCGAGTACCTAA 58.569 38.462 0.00 0.00 0.00 2.69
2793 4095 5.259832 ACTATCTTTGCCGAGTACCTAAC 57.740 43.478 0.00 0.00 0.00 2.34
2794 4096 4.954826 ACTATCTTTGCCGAGTACCTAACT 59.045 41.667 0.00 0.00 42.80 2.24
2804 4106 4.658713 GAGTACCTAACTCGGCAAAAAC 57.341 45.455 0.00 0.00 45.05 2.43
2805 4107 3.062042 AGTACCTAACTCGGCAAAAACG 58.938 45.455 0.00 0.00 30.33 3.60
2806 4108 0.589708 ACCTAACTCGGCAAAAACGC 59.410 50.000 0.00 0.00 0.00 4.84
2807 4109 0.452122 CCTAACTCGGCAAAAACGCG 60.452 55.000 3.53 3.53 0.00 6.01
2808 4110 0.509499 CTAACTCGGCAAAAACGCGA 59.491 50.000 15.93 0.00 0.00 5.87
2809 4111 0.935898 TAACTCGGCAAAAACGCGAA 59.064 45.000 15.93 0.00 0.00 4.70
2810 4112 0.099082 AACTCGGCAAAAACGCGAAA 59.901 45.000 15.93 0.00 0.00 3.46
2811 4113 0.309612 ACTCGGCAAAAACGCGAAAT 59.690 45.000 15.93 0.00 0.00 2.17
2812 4114 1.268845 ACTCGGCAAAAACGCGAAATT 60.269 42.857 15.93 1.19 0.00 1.82
2813 4115 1.382088 CTCGGCAAAAACGCGAAATTC 59.618 47.619 15.93 0.00 0.00 2.17
2814 4116 0.088858 CGGCAAAAACGCGAAATTCG 59.911 50.000 15.93 11.47 43.89 3.34
2815 4117 0.433115 GGCAAAAACGCGAAATTCGG 59.567 50.000 15.93 9.59 40.84 4.30
2816 4118 0.179285 GCAAAAACGCGAAATTCGGC 60.179 50.000 15.93 8.44 40.84 5.54
2817 4119 1.124462 CAAAAACGCGAAATTCGGCA 58.876 45.000 15.93 0.00 40.84 5.69
2818 4120 1.518929 CAAAAACGCGAAATTCGGCAA 59.481 42.857 15.93 0.00 40.84 4.52
2819 4121 1.841450 AAAACGCGAAATTCGGCAAA 58.159 40.000 15.93 0.00 40.84 3.68
2820 4122 1.125270 AAACGCGAAATTCGGCAAAC 58.875 45.000 15.93 0.00 40.84 2.93
2821 4123 0.029567 AACGCGAAATTCGGCAAACA 59.970 45.000 15.93 0.00 40.84 2.83
2822 4124 0.239879 ACGCGAAATTCGGCAAACAT 59.760 45.000 15.93 0.00 40.84 2.71
2823 4125 0.634731 CGCGAAATTCGGCAAACATG 59.365 50.000 17.49 0.00 40.84 3.21
2824 4126 1.696988 GCGAAATTCGGCAAACATGT 58.303 45.000 17.49 0.00 40.84 3.21
2825 4127 2.726373 CGCGAAATTCGGCAAACATGTA 60.726 45.455 17.49 0.00 40.84 2.29
2826 4128 2.592459 GCGAAATTCGGCAAACATGTAC 59.408 45.455 17.49 0.00 40.84 2.90
2827 4129 3.669557 GCGAAATTCGGCAAACATGTACT 60.670 43.478 17.49 0.00 40.84 2.73
2828 4130 4.472286 CGAAATTCGGCAAACATGTACTT 58.528 39.130 7.61 0.00 36.00 2.24
2829 4131 4.915085 CGAAATTCGGCAAACATGTACTTT 59.085 37.500 7.61 0.00 36.00 2.66
2830 4132 5.164196 CGAAATTCGGCAAACATGTACTTTG 60.164 40.000 7.61 1.02 36.00 2.77
2834 4136 2.697431 GCAAACATGTACTTTGCCGA 57.303 45.000 18.81 0.00 45.18 5.54
2835 4137 2.584791 GCAAACATGTACTTTGCCGAG 58.415 47.619 18.81 0.00 45.18 4.63
2836 4138 2.031157 GCAAACATGTACTTTGCCGAGT 60.031 45.455 18.81 0.00 45.18 4.18
2837 4139 3.554524 CAAACATGTACTTTGCCGAGTG 58.445 45.455 0.00 0.00 0.00 3.51
2838 4140 2.543777 ACATGTACTTTGCCGAGTGT 57.456 45.000 0.00 0.00 0.00 3.55
2839 4141 2.413837 ACATGTACTTTGCCGAGTGTC 58.586 47.619 0.00 0.00 0.00 3.67
2840 4142 2.224185 ACATGTACTTTGCCGAGTGTCA 60.224 45.455 0.00 0.67 0.00 3.58
2841 4143 2.831685 TGTACTTTGCCGAGTGTCAT 57.168 45.000 0.00 0.00 0.00 3.06
2842 4144 2.412870 TGTACTTTGCCGAGTGTCATG 58.587 47.619 0.00 0.00 0.00 3.07
2843 4145 1.732259 GTACTTTGCCGAGTGTCATGG 59.268 52.381 0.00 0.00 0.00 3.66
2844 4146 0.396435 ACTTTGCCGAGTGTCATGGA 59.604 50.000 0.00 0.00 0.00 3.41
2845 4147 1.003580 ACTTTGCCGAGTGTCATGGAT 59.996 47.619 0.00 0.00 0.00 3.41
2846 4148 2.236146 ACTTTGCCGAGTGTCATGGATA 59.764 45.455 0.00 0.00 0.00 2.59
2847 4149 3.270027 CTTTGCCGAGTGTCATGGATAA 58.730 45.455 0.00 0.00 0.00 1.75
2848 4150 3.342377 TTGCCGAGTGTCATGGATAAA 57.658 42.857 0.00 0.00 0.00 1.40
2849 4151 3.342377 TGCCGAGTGTCATGGATAAAA 57.658 42.857 0.00 0.00 0.00 1.52
2850 4152 3.006940 TGCCGAGTGTCATGGATAAAAC 58.993 45.455 0.00 0.00 0.00 2.43
2851 4153 2.030457 GCCGAGTGTCATGGATAAAACG 59.970 50.000 0.00 0.00 0.00 3.60
2852 4154 2.030457 CCGAGTGTCATGGATAAAACGC 59.970 50.000 0.00 0.00 0.00 4.84
2853 4155 2.930040 CGAGTGTCATGGATAAAACGCT 59.070 45.455 0.00 0.00 35.31 5.07
2854 4156 3.000322 CGAGTGTCATGGATAAAACGCTC 60.000 47.826 11.54 11.54 42.82 5.03
2855 4157 2.930040 AGTGTCATGGATAAAACGCTCG 59.070 45.455 0.00 0.00 0.00 5.03
2856 4158 2.030457 GTGTCATGGATAAAACGCTCGG 59.970 50.000 0.00 0.00 0.00 4.63
2857 4159 2.277084 GTCATGGATAAAACGCTCGGT 58.723 47.619 0.00 0.00 0.00 4.69
2858 4160 3.119065 TGTCATGGATAAAACGCTCGGTA 60.119 43.478 0.00 0.00 0.00 4.02
2859 4161 3.866910 GTCATGGATAAAACGCTCGGTAA 59.133 43.478 0.00 0.00 0.00 2.85
2860 4162 4.330620 GTCATGGATAAAACGCTCGGTAAA 59.669 41.667 0.00 0.00 0.00 2.01
2861 4163 4.936411 TCATGGATAAAACGCTCGGTAAAA 59.064 37.500 0.00 0.00 0.00 1.52
2862 4164 4.666928 TGGATAAAACGCTCGGTAAAAC 57.333 40.909 0.00 0.00 0.00 2.43
2863 4165 4.063689 TGGATAAAACGCTCGGTAAAACA 58.936 39.130 0.00 0.00 0.00 2.83
2864 4166 4.514441 TGGATAAAACGCTCGGTAAAACAA 59.486 37.500 0.00 0.00 0.00 2.83
2865 4167 4.847757 GGATAAAACGCTCGGTAAAACAAC 59.152 41.667 0.00 0.00 0.00 3.32
2866 4168 3.761311 AAAACGCTCGGTAAAACAACA 57.239 38.095 0.00 0.00 0.00 3.33
2867 4169 3.761311 AAACGCTCGGTAAAACAACAA 57.239 38.095 0.00 0.00 0.00 2.83
2868 4170 3.761311 AACGCTCGGTAAAACAACAAA 57.239 38.095 0.00 0.00 0.00 2.83
2869 4171 3.761311 ACGCTCGGTAAAACAACAAAA 57.239 38.095 0.00 0.00 0.00 2.44
2870 4172 4.295857 ACGCTCGGTAAAACAACAAAAT 57.704 36.364 0.00 0.00 0.00 1.82
2871 4173 4.674475 ACGCTCGGTAAAACAACAAAATT 58.326 34.783 0.00 0.00 0.00 1.82
2872 4174 4.736307 ACGCTCGGTAAAACAACAAAATTC 59.264 37.500 0.00 0.00 0.00 2.17
2873 4175 4.143906 CGCTCGGTAAAACAACAAAATTCG 60.144 41.667 0.00 0.00 0.00 3.34
2874 4176 4.147479 GCTCGGTAAAACAACAAAATTCGG 59.853 41.667 0.00 0.00 0.00 4.30
2875 4177 4.043073 TCGGTAAAACAACAAAATTCGGC 58.957 39.130 0.00 0.00 0.00 5.54
2876 4178 3.797256 CGGTAAAACAACAAAATTCGGCA 59.203 39.130 0.00 0.00 0.00 5.69
2877 4179 4.267928 CGGTAAAACAACAAAATTCGGCAA 59.732 37.500 0.00 0.00 0.00 4.52
2878 4180 5.220416 CGGTAAAACAACAAAATTCGGCAAA 60.220 36.000 0.00 0.00 0.00 3.68
2879 4181 5.960683 GGTAAAACAACAAAATTCGGCAAAC 59.039 36.000 0.00 0.00 0.00 2.93
2880 4182 5.613358 AAAACAACAAAATTCGGCAAACA 57.387 30.435 0.00 0.00 0.00 2.83
2881 4183 4.856115 AACAACAAAATTCGGCAAACAG 57.144 36.364 0.00 0.00 0.00 3.16
2882 4184 3.194062 ACAACAAAATTCGGCAAACAGG 58.806 40.909 0.00 0.00 0.00 4.00
2883 4185 2.524569 ACAAAATTCGGCAAACAGGG 57.475 45.000 0.00 0.00 0.00 4.45
2884 4186 1.147473 CAAAATTCGGCAAACAGGGC 58.853 50.000 0.00 0.00 0.00 5.19
2885 4187 1.047801 AAAATTCGGCAAACAGGGCT 58.952 45.000 0.00 0.00 0.00 5.19
2886 4188 1.047801 AAATTCGGCAAACAGGGCTT 58.952 45.000 0.00 0.00 0.00 4.35
2887 4189 1.047801 AATTCGGCAAACAGGGCTTT 58.952 45.000 0.00 0.00 0.00 3.51
2888 4190 0.318120 ATTCGGCAAACAGGGCTTTG 59.682 50.000 0.00 0.00 34.71 2.77
2901 4203 2.162716 GCTTTGCCACTACACTCGG 58.837 57.895 0.00 0.00 0.00 4.63
2902 4204 1.912371 GCTTTGCCACTACACTCGGC 61.912 60.000 0.00 0.00 46.43 5.54
2905 4207 4.371975 GCCACTACACTCGGCAAA 57.628 55.556 0.00 0.00 45.52 3.68
2906 4208 2.624169 GCCACTACACTCGGCAAAA 58.376 52.632 0.00 0.00 45.52 2.44
2907 4209 0.517316 GCCACTACACTCGGCAAAAG 59.483 55.000 0.00 0.00 45.52 2.27
2908 4210 1.156736 CCACTACACTCGGCAAAAGG 58.843 55.000 0.00 0.00 0.00 3.11
2909 4211 1.156736 CACTACACTCGGCAAAAGGG 58.843 55.000 0.00 0.00 0.00 3.95
2910 4212 0.036306 ACTACACTCGGCAAAAGGGG 59.964 55.000 0.00 0.00 0.00 4.79
2911 4213 0.323629 CTACACTCGGCAAAAGGGGA 59.676 55.000 0.00 0.00 0.00 4.81
2912 4214 0.988832 TACACTCGGCAAAAGGGGAT 59.011 50.000 0.00 0.00 0.00 3.85
2913 4215 0.322546 ACACTCGGCAAAAGGGGATC 60.323 55.000 0.00 0.00 0.00 3.36
2914 4216 0.035056 CACTCGGCAAAAGGGGATCT 60.035 55.000 0.00 0.00 0.00 2.75
2915 4217 0.698818 ACTCGGCAAAAGGGGATCTT 59.301 50.000 0.00 0.00 37.28 2.40
2916 4218 1.075536 ACTCGGCAAAAGGGGATCTTT 59.924 47.619 0.00 0.00 46.82 2.52
2917 4219 2.307686 ACTCGGCAAAAGGGGATCTTTA 59.692 45.455 0.00 0.00 44.30 1.85
2918 4220 2.683362 CTCGGCAAAAGGGGATCTTTAC 59.317 50.000 0.00 0.00 44.30 2.01
2919 4221 1.749063 CGGCAAAAGGGGATCTTTACC 59.251 52.381 0.00 0.00 44.30 2.85
2920 4222 1.749063 GGCAAAAGGGGATCTTTACCG 59.251 52.381 0.00 0.00 44.30 4.02
2921 4223 2.619590 GGCAAAAGGGGATCTTTACCGA 60.620 50.000 0.00 0.00 44.30 4.69
2922 4224 2.683362 GCAAAAGGGGATCTTTACCGAG 59.317 50.000 0.00 0.00 44.30 4.63
2923 4225 3.872630 GCAAAAGGGGATCTTTACCGAGT 60.873 47.826 0.00 0.00 44.30 4.18
2924 4226 3.629142 AAAGGGGATCTTTACCGAGTG 57.371 47.619 0.00 0.00 43.35 3.51
2925 4227 2.249309 AGGGGATCTTTACCGAGTGT 57.751 50.000 0.00 0.00 0.00 3.55
2926 4228 2.108970 AGGGGATCTTTACCGAGTGTC 58.891 52.381 0.00 0.00 0.00 3.67
2927 4229 1.829222 GGGGATCTTTACCGAGTGTCA 59.171 52.381 0.00 0.00 0.00 3.58
2928 4230 2.418334 GGGGATCTTTACCGAGTGTCAC 60.418 54.545 0.00 0.00 0.00 3.67
2929 4231 2.527100 GGATCTTTACCGAGTGTCACG 58.473 52.381 0.00 0.00 0.00 4.35
2930 4232 1.918609 GATCTTTACCGAGTGTCACGC 59.081 52.381 0.00 0.00 0.00 5.34
2931 4233 0.956633 TCTTTACCGAGTGTCACGCT 59.043 50.000 5.14 0.00 0.00 5.07
2932 4234 1.068748 TCTTTACCGAGTGTCACGCTC 60.069 52.381 8.43 8.43 37.61 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 6.668541 AATCAAACAGATTATCCGTCACTG 57.331 37.500 0.00 0.00 45.00 3.66
200 201 2.223711 TGCATTCTGATGACATGCATGC 60.224 45.455 26.53 18.59 42.46 4.06
205 206 4.634443 TGAGTTCTGCATTCTGATGACATG 59.366 41.667 0.00 0.00 35.16 3.21
206 207 4.840271 TGAGTTCTGCATTCTGATGACAT 58.160 39.130 0.00 0.00 35.16 3.06
207 208 4.251268 CTGAGTTCTGCATTCTGATGACA 58.749 43.478 0.00 0.00 35.16 3.58
208 209 4.252073 ACTGAGTTCTGCATTCTGATGAC 58.748 43.478 0.00 0.00 35.16 3.06
209 210 4.548451 ACTGAGTTCTGCATTCTGATGA 57.452 40.909 0.00 0.00 35.16 2.92
210 211 6.732531 TTTACTGAGTTCTGCATTCTGATG 57.267 37.500 0.00 0.00 36.32 3.07
211 212 7.108194 TGATTTACTGAGTTCTGCATTCTGAT 58.892 34.615 0.00 0.00 0.00 2.90
212 213 6.466812 TGATTTACTGAGTTCTGCATTCTGA 58.533 36.000 0.00 0.00 0.00 3.27
213 214 6.732531 TGATTTACTGAGTTCTGCATTCTG 57.267 37.500 0.00 0.00 0.00 3.02
214 215 7.828223 AGATTGATTTACTGAGTTCTGCATTCT 59.172 33.333 0.00 0.00 0.00 2.40
215 216 7.983307 AGATTGATTTACTGAGTTCTGCATTC 58.017 34.615 0.00 0.00 0.00 2.67
262 285 7.143340 GTGTTTGCTGACGACCTGTATATATA 58.857 38.462 0.00 0.00 0.00 0.86
263 286 5.983720 GTGTTTGCTGACGACCTGTATATAT 59.016 40.000 0.00 0.00 0.00 0.86
264 287 5.345702 GTGTTTGCTGACGACCTGTATATA 58.654 41.667 0.00 0.00 0.00 0.86
265 288 4.181578 GTGTTTGCTGACGACCTGTATAT 58.818 43.478 0.00 0.00 0.00 0.86
270 293 1.507141 GGGTGTTTGCTGACGACCTG 61.507 60.000 0.00 0.00 0.00 4.00
273 296 2.935955 CGGGTGTTTGCTGACGAC 59.064 61.111 0.00 0.00 0.00 4.34
296 319 4.121961 GTTGCTGACGAACTCTCTTTTC 57.878 45.455 0.00 0.00 0.00 2.29
334 359 4.139786 CCTTGAGGCTATGCATTGTACAT 58.860 43.478 3.54 0.00 0.00 2.29
335 360 3.054434 ACCTTGAGGCTATGCATTGTACA 60.054 43.478 3.54 2.41 39.32 2.90
336 361 3.313526 CACCTTGAGGCTATGCATTGTAC 59.686 47.826 3.54 0.42 39.32 2.90
337 362 3.199727 TCACCTTGAGGCTATGCATTGTA 59.800 43.478 3.54 0.00 39.32 2.41
338 363 2.025981 TCACCTTGAGGCTATGCATTGT 60.026 45.455 3.54 0.00 39.32 2.71
339 364 2.646930 TCACCTTGAGGCTATGCATTG 58.353 47.619 3.54 3.55 39.32 2.82
340 365 3.220110 CATCACCTTGAGGCTATGCATT 58.780 45.455 3.54 0.00 39.32 3.56
341 366 2.860009 CATCACCTTGAGGCTATGCAT 58.140 47.619 3.79 3.79 39.32 3.96
342 367 2.336945 CATCACCTTGAGGCTATGCA 57.663 50.000 0.00 0.00 39.32 3.96
361 386 2.256591 CCTACATGGCATGCGAGGC 61.257 63.158 26.96 0.00 32.09 4.70
362 387 0.035881 ATCCTACATGGCATGCGAGG 59.964 55.000 30.04 30.04 37.80 4.63
363 388 1.436600 GATCCTACATGGCATGCGAG 58.563 55.000 26.70 22.01 35.26 5.03
364 389 0.319813 CGATCCTACATGGCATGCGA 60.320 55.000 26.70 19.03 35.26 5.10
365 390 1.293963 CCGATCCTACATGGCATGCG 61.294 60.000 26.70 19.33 35.26 4.73
366 391 0.035317 TCCGATCCTACATGGCATGC 59.965 55.000 26.70 9.90 35.26 4.06
367 392 2.775911 ATCCGATCCTACATGGCATG 57.224 50.000 25.31 25.31 35.26 4.06
368 393 4.033009 TCATATCCGATCCTACATGGCAT 58.967 43.478 0.00 0.00 35.26 4.40
369 394 3.195610 GTCATATCCGATCCTACATGGCA 59.804 47.826 0.00 0.00 35.26 4.92
370 395 3.735208 CGTCATATCCGATCCTACATGGC 60.735 52.174 0.00 0.00 35.26 4.40
371 396 3.444034 ACGTCATATCCGATCCTACATGG 59.556 47.826 0.00 0.00 37.10 3.66
372 397 4.703645 ACGTCATATCCGATCCTACATG 57.296 45.455 0.00 0.00 0.00 3.21
373 398 6.433404 ACTTTACGTCATATCCGATCCTACAT 59.567 38.462 0.00 0.00 0.00 2.29
374 399 5.766670 ACTTTACGTCATATCCGATCCTACA 59.233 40.000 0.00 0.00 0.00 2.74
375 400 6.251655 ACTTTACGTCATATCCGATCCTAC 57.748 41.667 0.00 0.00 0.00 3.18
376 401 6.596888 CCTACTTTACGTCATATCCGATCCTA 59.403 42.308 0.00 0.00 0.00 2.94
377 402 5.415077 CCTACTTTACGTCATATCCGATCCT 59.585 44.000 0.00 0.00 0.00 3.24
378 403 5.182760 ACCTACTTTACGTCATATCCGATCC 59.817 44.000 0.00 0.00 0.00 3.36
379 404 6.251655 ACCTACTTTACGTCATATCCGATC 57.748 41.667 0.00 0.00 0.00 3.69
380 405 6.567321 CGAACCTACTTTACGTCATATCCGAT 60.567 42.308 0.00 0.00 0.00 4.18
381 406 5.277490 CGAACCTACTTTACGTCATATCCGA 60.277 44.000 0.00 0.00 0.00 4.55
382 407 4.908156 CGAACCTACTTTACGTCATATCCG 59.092 45.833 0.00 0.00 0.00 4.18
383 408 5.009010 TCCGAACCTACTTTACGTCATATCC 59.991 44.000 0.00 0.00 0.00 2.59
384 409 6.064846 TCCGAACCTACTTTACGTCATATC 57.935 41.667 0.00 0.00 0.00 1.63
385 410 6.645790 ATCCGAACCTACTTTACGTCATAT 57.354 37.500 0.00 0.00 0.00 1.78
386 411 6.205464 CCTATCCGAACCTACTTTACGTCATA 59.795 42.308 0.00 0.00 0.00 2.15
387 412 4.996788 ATCCGAACCTACTTTACGTCAT 57.003 40.909 0.00 0.00 0.00 3.06
388 413 4.336433 CCTATCCGAACCTACTTTACGTCA 59.664 45.833 0.00 0.00 0.00 4.35
389 414 4.261363 CCCTATCCGAACCTACTTTACGTC 60.261 50.000 0.00 0.00 0.00 4.34
390 415 3.633986 CCCTATCCGAACCTACTTTACGT 59.366 47.826 0.00 0.00 0.00 3.57
391 416 3.885297 TCCCTATCCGAACCTACTTTACG 59.115 47.826 0.00 0.00 0.00 3.18
392 417 5.738495 GCTTCCCTATCCGAACCTACTTTAC 60.738 48.000 0.00 0.00 0.00 2.01
393 418 4.343239 GCTTCCCTATCCGAACCTACTTTA 59.657 45.833 0.00 0.00 0.00 1.85
394 419 3.134262 GCTTCCCTATCCGAACCTACTTT 59.866 47.826 0.00 0.00 0.00 2.66
395 420 2.699321 GCTTCCCTATCCGAACCTACTT 59.301 50.000 0.00 0.00 0.00 2.24
396 421 2.317973 GCTTCCCTATCCGAACCTACT 58.682 52.381 0.00 0.00 0.00 2.57
397 422 1.000496 CGCTTCCCTATCCGAACCTAC 60.000 57.143 0.00 0.00 0.00 3.18
398 423 1.133699 TCGCTTCCCTATCCGAACCTA 60.134 52.381 0.00 0.00 0.00 3.08
399 424 0.396695 TCGCTTCCCTATCCGAACCT 60.397 55.000 0.00 0.00 0.00 3.50
400 425 0.032267 CTCGCTTCCCTATCCGAACC 59.968 60.000 0.00 0.00 0.00 3.62
401 426 1.030457 TCTCGCTTCCCTATCCGAAC 58.970 55.000 0.00 0.00 0.00 3.95
402 427 1.887198 GATCTCGCTTCCCTATCCGAA 59.113 52.381 0.00 0.00 0.00 4.30
403 428 1.074084 AGATCTCGCTTCCCTATCCGA 59.926 52.381 0.00 0.00 0.00 4.55
404 429 1.540267 AGATCTCGCTTCCCTATCCG 58.460 55.000 0.00 0.00 0.00 4.18
405 430 3.161866 AGAAGATCTCGCTTCCCTATCC 58.838 50.000 0.00 0.00 44.14 2.59
406 431 3.823873 TGAGAAGATCTCGCTTCCCTATC 59.176 47.826 0.00 0.00 46.25 2.08
407 432 3.838565 TGAGAAGATCTCGCTTCCCTAT 58.161 45.455 0.00 0.00 46.25 2.57
408 433 3.298686 TGAGAAGATCTCGCTTCCCTA 57.701 47.619 0.00 0.00 46.25 3.53
409 434 2.151502 TGAGAAGATCTCGCTTCCCT 57.848 50.000 0.00 0.00 46.25 4.20
410 435 2.482839 CCTTGAGAAGATCTCGCTTCCC 60.483 54.545 0.00 0.00 46.25 3.97
411 436 2.428890 TCCTTGAGAAGATCTCGCTTCC 59.571 50.000 0.00 0.00 46.25 3.46
412 437 3.490761 CCTCCTTGAGAAGATCTCGCTTC 60.491 52.174 0.00 0.00 46.25 3.86
413 438 2.430332 CCTCCTTGAGAAGATCTCGCTT 59.570 50.000 0.00 0.00 46.25 4.68
414 439 2.031120 CCTCCTTGAGAAGATCTCGCT 58.969 52.381 0.00 0.00 46.25 4.93
415 440 1.537990 GCCTCCTTGAGAAGATCTCGC 60.538 57.143 0.00 0.00 46.25 5.03
416 441 1.753649 TGCCTCCTTGAGAAGATCTCG 59.246 52.381 0.00 0.00 46.25 4.04
417 442 2.102925 CCTGCCTCCTTGAGAAGATCTC 59.897 54.545 0.00 0.39 43.65 2.75
418 443 2.117865 CCTGCCTCCTTGAGAAGATCT 58.882 52.381 0.00 0.00 0.00 2.75
419 444 1.836802 ACCTGCCTCCTTGAGAAGATC 59.163 52.381 0.00 0.00 0.00 2.75
420 445 1.558756 CACCTGCCTCCTTGAGAAGAT 59.441 52.381 0.00 0.00 0.00 2.40
421 446 0.979665 CACCTGCCTCCTTGAGAAGA 59.020 55.000 0.00 0.00 0.00 2.87
422 447 0.689623 ACACCTGCCTCCTTGAGAAG 59.310 55.000 0.00 0.00 0.00 2.85
423 448 1.140312 AACACCTGCCTCCTTGAGAA 58.860 50.000 0.00 0.00 0.00 2.87
424 449 1.140312 AAACACCTGCCTCCTTGAGA 58.860 50.000 0.00 0.00 0.00 3.27
425 450 1.202806 TCAAACACCTGCCTCCTTGAG 60.203 52.381 0.00 0.00 0.00 3.02
426 451 0.843309 TCAAACACCTGCCTCCTTGA 59.157 50.000 0.00 0.00 0.00 3.02
427 452 1.610522 CTTCAAACACCTGCCTCCTTG 59.389 52.381 0.00 0.00 0.00 3.61
428 453 1.494721 TCTTCAAACACCTGCCTCCTT 59.505 47.619 0.00 0.00 0.00 3.36
429 454 1.072965 CTCTTCAAACACCTGCCTCCT 59.927 52.381 0.00 0.00 0.00 3.69
430 455 1.072331 TCTCTTCAAACACCTGCCTCC 59.928 52.381 0.00 0.00 0.00 4.30
431 456 2.550830 TCTCTTCAAACACCTGCCTC 57.449 50.000 0.00 0.00 0.00 4.70
432 457 3.297134 TTTCTCTTCAAACACCTGCCT 57.703 42.857 0.00 0.00 0.00 4.75
433 458 4.142160 ACTTTTTCTCTTCAAACACCTGCC 60.142 41.667 0.00 0.00 0.00 4.85
434 459 4.800471 CACTTTTTCTCTTCAAACACCTGC 59.200 41.667 0.00 0.00 0.00 4.85
435 460 5.801947 CACACTTTTTCTCTTCAAACACCTG 59.198 40.000 0.00 0.00 0.00 4.00
436 461 5.105756 CCACACTTTTTCTCTTCAAACACCT 60.106 40.000 0.00 0.00 0.00 4.00
437 462 5.102313 CCACACTTTTTCTCTTCAAACACC 58.898 41.667 0.00 0.00 0.00 4.16
438 463 5.709966 ACCACACTTTTTCTCTTCAAACAC 58.290 37.500 0.00 0.00 0.00 3.32
439 464 5.105917 GGACCACACTTTTTCTCTTCAAACA 60.106 40.000 0.00 0.00 0.00 2.83
440 465 5.340803 GGACCACACTTTTTCTCTTCAAAC 58.659 41.667 0.00 0.00 0.00 2.93
441 466 4.095782 CGGACCACACTTTTTCTCTTCAAA 59.904 41.667 0.00 0.00 0.00 2.69
442 467 3.625764 CGGACCACACTTTTTCTCTTCAA 59.374 43.478 0.00 0.00 0.00 2.69
443 468 3.202906 CGGACCACACTTTTTCTCTTCA 58.797 45.455 0.00 0.00 0.00 3.02
444 469 2.548480 CCGGACCACACTTTTTCTCTTC 59.452 50.000 0.00 0.00 0.00 2.87
445 470 2.092592 ACCGGACCACACTTTTTCTCTT 60.093 45.455 9.46 0.00 0.00 2.85
446 471 1.489230 ACCGGACCACACTTTTTCTCT 59.511 47.619 9.46 0.00 0.00 3.10
447 472 1.602377 CACCGGACCACACTTTTTCTC 59.398 52.381 9.46 0.00 0.00 2.87
448 473 1.210967 TCACCGGACCACACTTTTTCT 59.789 47.619 9.46 0.00 0.00 2.52
449 474 1.332686 GTCACCGGACCACACTTTTTC 59.667 52.381 9.46 0.00 38.12 2.29
450 475 1.340211 TGTCACCGGACCACACTTTTT 60.340 47.619 9.46 0.00 43.65 1.94
451 476 0.253610 TGTCACCGGACCACACTTTT 59.746 50.000 9.46 0.00 43.65 2.27
452 477 0.253610 TTGTCACCGGACCACACTTT 59.746 50.000 9.46 0.00 43.65 2.66
453 478 0.253610 TTTGTCACCGGACCACACTT 59.746 50.000 9.46 0.00 43.65 3.16
454 479 0.253610 TTTTGTCACCGGACCACACT 59.746 50.000 9.46 0.00 43.65 3.55
455 480 1.096416 TTTTTGTCACCGGACCACAC 58.904 50.000 9.46 0.00 43.65 3.82
456 481 1.096416 GTTTTTGTCACCGGACCACA 58.904 50.000 9.46 4.37 43.65 4.17
457 482 1.064952 CAGTTTTTGTCACCGGACCAC 59.935 52.381 9.46 1.18 43.65 4.16
458 483 1.065345 TCAGTTTTTGTCACCGGACCA 60.065 47.619 9.46 0.00 43.65 4.02
459 484 1.670791 TCAGTTTTTGTCACCGGACC 58.329 50.000 9.46 0.00 43.65 4.46
460 485 3.768468 TTTCAGTTTTTGTCACCGGAC 57.232 42.857 9.46 0.00 44.57 4.79
461 486 3.129638 CCTTTTCAGTTTTTGTCACCGGA 59.870 43.478 9.46 0.00 0.00 5.14
462 487 3.119280 ACCTTTTCAGTTTTTGTCACCGG 60.119 43.478 0.00 0.00 0.00 5.28
463 488 4.104696 ACCTTTTCAGTTTTTGTCACCG 57.895 40.909 0.00 0.00 0.00 4.94
464 489 4.629634 CCAACCTTTTCAGTTTTTGTCACC 59.370 41.667 0.00 0.00 0.00 4.02
465 490 5.474825 TCCAACCTTTTCAGTTTTTGTCAC 58.525 37.500 0.00 0.00 0.00 3.67
466 491 5.245075 ACTCCAACCTTTTCAGTTTTTGTCA 59.755 36.000 0.00 0.00 0.00 3.58
467 492 5.576774 CACTCCAACCTTTTCAGTTTTTGTC 59.423 40.000 0.00 0.00 0.00 3.18
468 493 5.245075 TCACTCCAACCTTTTCAGTTTTTGT 59.755 36.000 0.00 0.00 0.00 2.83
469 494 5.719173 TCACTCCAACCTTTTCAGTTTTTG 58.281 37.500 0.00 0.00 0.00 2.44
470 495 5.993748 TCACTCCAACCTTTTCAGTTTTT 57.006 34.783 0.00 0.00 0.00 1.94
471 496 5.993748 TTCACTCCAACCTTTTCAGTTTT 57.006 34.783 0.00 0.00 0.00 2.43
472 497 5.993748 TTTCACTCCAACCTTTTCAGTTT 57.006 34.783 0.00 0.00 0.00 2.66
473 498 5.480422 ACTTTTCACTCCAACCTTTTCAGTT 59.520 36.000 0.00 0.00 0.00 3.16
474 499 5.016831 ACTTTTCACTCCAACCTTTTCAGT 58.983 37.500 0.00 0.00 0.00 3.41
475 500 5.582689 ACTTTTCACTCCAACCTTTTCAG 57.417 39.130 0.00 0.00 0.00 3.02
476 501 7.394923 TCTTTACTTTTCACTCCAACCTTTTCA 59.605 33.333 0.00 0.00 0.00 2.69
477 502 7.768240 TCTTTACTTTTCACTCCAACCTTTTC 58.232 34.615 0.00 0.00 0.00 2.29
478 503 7.712204 TCTTTACTTTTCACTCCAACCTTTT 57.288 32.000 0.00 0.00 0.00 2.27
479 504 7.684428 GCATCTTTACTTTTCACTCCAACCTTT 60.684 37.037 0.00 0.00 0.00 3.11
480 505 6.239036 GCATCTTTACTTTTCACTCCAACCTT 60.239 38.462 0.00 0.00 0.00 3.50
481 506 5.241728 GCATCTTTACTTTTCACTCCAACCT 59.758 40.000 0.00 0.00 0.00 3.50
482 507 5.009610 TGCATCTTTACTTTTCACTCCAACC 59.990 40.000 0.00 0.00 0.00 3.77
483 508 6.072112 TGCATCTTTACTTTTCACTCCAAC 57.928 37.500 0.00 0.00 0.00 3.77
484 509 6.899393 ATGCATCTTTACTTTTCACTCCAA 57.101 33.333 0.00 0.00 0.00 3.53
485 510 9.851686 ATATATGCATCTTTACTTTTCACTCCA 57.148 29.630 0.19 0.00 0.00 3.86
527 552 9.984590 ACTAGTGGGCCTAATTAAGAAATAAAA 57.015 29.630 4.53 0.00 0.00 1.52
528 553 9.403583 CACTAGTGGGCCTAATTAAGAAATAAA 57.596 33.333 15.49 0.00 0.00 1.40
529 554 7.996644 CCACTAGTGGGCCTAATTAAGAAATAA 59.003 37.037 31.15 0.00 46.81 1.40
530 555 7.514721 CCACTAGTGGGCCTAATTAAGAAATA 58.485 38.462 31.15 0.00 46.81 1.40
531 556 6.365520 CCACTAGTGGGCCTAATTAAGAAAT 58.634 40.000 31.15 0.00 46.81 2.17
532 557 5.751586 CCACTAGTGGGCCTAATTAAGAAA 58.248 41.667 31.15 0.00 46.81 2.52
533 558 5.367945 CCACTAGTGGGCCTAATTAAGAA 57.632 43.478 31.15 0.00 46.81 2.52
547 572 3.941483 CCCAATGAAAGCTACCACTAGTG 59.059 47.826 16.34 16.34 0.00 2.74
548 573 3.054361 CCCCAATGAAAGCTACCACTAGT 60.054 47.826 0.00 0.00 0.00 2.57
549 574 3.199946 TCCCCAATGAAAGCTACCACTAG 59.800 47.826 0.00 0.00 0.00 2.57
550 575 3.186283 TCCCCAATGAAAGCTACCACTA 58.814 45.455 0.00 0.00 0.00 2.74
551 576 1.992557 TCCCCAATGAAAGCTACCACT 59.007 47.619 0.00 0.00 0.00 4.00
552 577 2.026262 TCTCCCCAATGAAAGCTACCAC 60.026 50.000 0.00 0.00 0.00 4.16
553 578 2.274542 TCTCCCCAATGAAAGCTACCA 58.725 47.619 0.00 0.00 0.00 3.25
554 579 3.366052 TTCTCCCCAATGAAAGCTACC 57.634 47.619 0.00 0.00 0.00 3.18
555 580 5.722021 TTTTTCTCCCCAATGAAAGCTAC 57.278 39.130 0.00 0.00 34.29 3.58
575 600 9.869757 GTAATTTGAGGCACCTACATTTATTTT 57.130 29.630 0.00 0.00 0.00 1.82
576 601 9.255029 AGTAATTTGAGGCACCTACATTTATTT 57.745 29.630 0.00 0.00 0.00 1.40
577 602 8.823220 AGTAATTTGAGGCACCTACATTTATT 57.177 30.769 0.00 0.00 0.00 1.40
578 603 8.823220 AAGTAATTTGAGGCACCTACATTTAT 57.177 30.769 0.00 0.00 0.00 1.40
579 604 8.644374 AAAGTAATTTGAGGCACCTACATTTA 57.356 30.769 0.00 0.00 0.00 1.40
580 605 7.539034 AAAGTAATTTGAGGCACCTACATTT 57.461 32.000 0.00 0.00 0.00 2.32
581 606 7.539034 AAAAGTAATTTGAGGCACCTACATT 57.461 32.000 0.00 0.00 0.00 2.71
582 607 7.015195 ACAAAAAGTAATTTGAGGCACCTACAT 59.985 33.333 6.76 0.00 41.73 2.29
583 608 6.322712 ACAAAAAGTAATTTGAGGCACCTACA 59.677 34.615 6.76 0.00 41.73 2.74
584 609 6.745116 ACAAAAAGTAATTTGAGGCACCTAC 58.255 36.000 6.76 0.00 41.73 3.18
585 610 6.293735 CGACAAAAAGTAATTTGAGGCACCTA 60.294 38.462 6.76 0.00 41.73 3.08
586 611 5.507315 CGACAAAAAGTAATTTGAGGCACCT 60.507 40.000 6.76 0.00 41.73 4.00
587 612 4.679654 CGACAAAAAGTAATTTGAGGCACC 59.320 41.667 6.76 0.00 41.73 5.01
588 613 5.173131 CACGACAAAAAGTAATTTGAGGCAC 59.827 40.000 6.76 0.00 41.73 5.01
589 614 5.066634 TCACGACAAAAAGTAATTTGAGGCA 59.933 36.000 6.76 0.00 41.73 4.75
590 615 5.516090 TCACGACAAAAAGTAATTTGAGGC 58.484 37.500 6.76 0.00 41.73 4.70
591 616 6.142320 GCTTCACGACAAAAAGTAATTTGAGG 59.858 38.462 6.76 1.35 41.73 3.86
592 617 6.690957 TGCTTCACGACAAAAAGTAATTTGAG 59.309 34.615 6.76 3.48 41.73 3.02
593 618 6.556212 TGCTTCACGACAAAAAGTAATTTGA 58.444 32.000 6.76 0.00 41.73 2.69
594 619 6.804534 TGCTTCACGACAAAAAGTAATTTG 57.195 33.333 0.00 0.00 44.11 2.32
595 620 9.128107 CATATGCTTCACGACAAAAAGTAATTT 57.872 29.630 0.00 0.00 0.00 1.82
596 621 8.296713 ACATATGCTTCACGACAAAAAGTAATT 58.703 29.630 1.58 0.00 0.00 1.40
597 622 7.816640 ACATATGCTTCACGACAAAAAGTAAT 58.183 30.769 1.58 0.00 0.00 1.89
598 623 7.197071 ACATATGCTTCACGACAAAAAGTAA 57.803 32.000 1.58 0.00 0.00 2.24
599 624 6.795098 ACATATGCTTCACGACAAAAAGTA 57.205 33.333 1.58 0.00 0.00 2.24
600 625 5.689383 ACATATGCTTCACGACAAAAAGT 57.311 34.783 1.58 0.00 0.00 2.66
601 626 6.907212 GGATACATATGCTTCACGACAAAAAG 59.093 38.462 1.58 0.00 0.00 2.27
602 627 6.372937 TGGATACATATGCTTCACGACAAAAA 59.627 34.615 1.58 0.00 46.17 1.94
603 628 5.877564 TGGATACATATGCTTCACGACAAAA 59.122 36.000 1.58 0.00 46.17 2.44
604 629 5.423886 TGGATACATATGCTTCACGACAAA 58.576 37.500 1.58 0.00 46.17 2.83
605 630 5.017294 TGGATACATATGCTTCACGACAA 57.983 39.130 1.58 0.00 46.17 3.18
606 631 4.664150 TGGATACATATGCTTCACGACA 57.336 40.909 1.58 0.00 46.17 4.35
620 645 6.777782 TGTACAATGATGGCATATGGATACA 58.222 36.000 0.00 4.71 43.07 2.29
621 646 7.680350 GCATGTACAATGATGGCATATGGATAC 60.680 40.741 0.00 2.02 33.44 2.24
622 647 6.319405 GCATGTACAATGATGGCATATGGATA 59.681 38.462 0.00 0.00 33.44 2.59
623 648 5.126545 GCATGTACAATGATGGCATATGGAT 59.873 40.000 0.00 0.00 33.44 3.41
624 649 4.460034 GCATGTACAATGATGGCATATGGA 59.540 41.667 0.00 0.00 33.44 3.41
625 650 4.381185 GGCATGTACAATGATGGCATATGG 60.381 45.833 14.01 0.00 43.00 2.74
626 651 4.381185 GGGCATGTACAATGATGGCATATG 60.381 45.833 18.87 2.78 44.77 1.78
627 652 3.765511 GGGCATGTACAATGATGGCATAT 59.234 43.478 18.87 0.00 44.77 1.78
628 653 3.156293 GGGCATGTACAATGATGGCATA 58.844 45.455 18.87 0.00 44.77 3.14
629 654 1.965643 GGGCATGTACAATGATGGCAT 59.034 47.619 18.87 0.00 44.77 4.40
630 655 1.401761 GGGCATGTACAATGATGGCA 58.598 50.000 18.87 0.00 44.77 4.92
631 656 0.675633 GGGGCATGTACAATGATGGC 59.324 55.000 11.25 11.25 42.82 4.40
632 657 1.133388 AGGGGGCATGTACAATGATGG 60.133 52.381 0.00 0.00 0.00 3.51
633 658 2.369983 AGGGGGCATGTACAATGATG 57.630 50.000 0.00 0.00 0.00 3.07
634 659 4.473444 CTTTAGGGGGCATGTACAATGAT 58.527 43.478 0.00 0.00 0.00 2.45
635 660 3.372566 CCTTTAGGGGGCATGTACAATGA 60.373 47.826 0.00 0.00 0.00 2.57
636 661 2.958355 CCTTTAGGGGGCATGTACAATG 59.042 50.000 0.00 0.12 0.00 2.82
637 662 3.312736 CCTTTAGGGGGCATGTACAAT 57.687 47.619 0.00 0.00 0.00 2.71
638 663 2.818751 CCTTTAGGGGGCATGTACAA 57.181 50.000 0.00 0.00 0.00 2.41
1293 2167 4.002506 TCAGCCGCCGCTTCTTGA 62.003 61.111 0.00 0.00 45.55 3.02
1600 2476 2.615447 CAGCTTGTGCAAGAACAGAGAA 59.385 45.455 15.31 0.00 40.79 2.87
1956 3161 5.045872 TCGATCTGCATGAAGTTGATAGTG 58.954 41.667 0.00 0.00 0.00 2.74
1957 3162 5.268118 TCGATCTGCATGAAGTTGATAGT 57.732 39.130 0.00 0.00 0.00 2.12
1958 3163 6.782298 AATCGATCTGCATGAAGTTGATAG 57.218 37.500 0.00 0.00 0.00 2.08
1959 3164 7.436933 AGTAATCGATCTGCATGAAGTTGATA 58.563 34.615 0.00 0.00 0.00 2.15
1960 3165 6.286758 AGTAATCGATCTGCATGAAGTTGAT 58.713 36.000 0.00 0.88 0.00 2.57
1961 3166 5.664457 AGTAATCGATCTGCATGAAGTTGA 58.336 37.500 0.00 0.00 0.00 3.18
2180 3407 5.351948 TGATTGCCAACTAGCACATACTA 57.648 39.130 0.00 0.00 43.97 1.82
2181 3408 4.220693 TGATTGCCAACTAGCACATACT 57.779 40.909 0.00 0.00 43.97 2.12
2244 3481 7.449395 CACCACCACCATCATCAATATTTAGAT 59.551 37.037 0.00 0.00 0.00 1.98
2262 3502 1.965643 TGTACTACCAGTCACCACCAC 59.034 52.381 0.00 0.00 0.00 4.16
2265 3505 5.649395 TGTATACTGTACTACCAGTCACCAC 59.351 44.000 4.17 0.00 44.36 4.16
2272 3515 9.395707 GATCGAAATTGTATACTGTACTACCAG 57.604 37.037 4.17 0.00 38.45 4.00
2273 3516 9.128404 AGATCGAAATTGTATACTGTACTACCA 57.872 33.333 4.17 0.00 0.00 3.25
2274 3517 9.395707 CAGATCGAAATTGTATACTGTACTACC 57.604 37.037 4.17 0.00 0.00 3.18
2275 3518 9.947669 ACAGATCGAAATTGTATACTGTACTAC 57.052 33.333 4.17 0.00 35.95 2.73
2401 3695 6.149633 CACAAGGGCTAACATACAAAACTTC 58.850 40.000 0.00 0.00 0.00 3.01
2476 3777 1.064611 TGGAACTCGGGACAAAACCAA 60.065 47.619 0.00 0.00 0.00 3.67
2503 3804 7.187824 AGTTCTAGATAGAATGAACTTGGCA 57.812 36.000 5.64 0.00 44.32 4.92
2507 3808 6.508777 GCCGAGTTCTAGATAGAATGAACTT 58.491 40.000 5.64 0.00 45.95 2.66
2520 3821 2.095161 ACAGAAGTTCGCCGAGTTCTAG 60.095 50.000 11.94 9.72 37.24 2.43
2521 3822 1.884579 ACAGAAGTTCGCCGAGTTCTA 59.115 47.619 11.94 0.00 37.24 2.10
2522 3823 0.674534 ACAGAAGTTCGCCGAGTTCT 59.325 50.000 7.71 7.71 39.33 3.01
2535 3836 2.154854 TCAAACTCGGCAGACAGAAG 57.845 50.000 0.00 0.00 0.00 2.85
2540 3841 3.896648 TTTGAATCAAACTCGGCAGAC 57.103 42.857 4.03 0.00 0.00 3.51
2556 3857 1.442769 GCTGCCGAGTCAGATTTTGA 58.557 50.000 3.96 0.00 36.19 2.69
2557 3858 0.095935 CGCTGCCGAGTCAGATTTTG 59.904 55.000 0.00 0.00 36.19 2.44
2558 3859 0.037326 TCGCTGCCGAGTCAGATTTT 60.037 50.000 0.00 0.00 38.82 1.82
2569 3870 1.638467 GAGTTGCTTATCGCTGCCG 59.362 57.895 0.00 0.00 40.11 5.69
2604 3906 2.552315 TCGTTTTTCATCAGAACCTGGC 59.448 45.455 0.00 0.00 32.39 4.85
2605 3907 5.376854 AATCGTTTTTCATCAGAACCTGG 57.623 39.130 0.00 0.00 32.39 4.45
2624 3926 6.245710 CCGAGTTTTTGTTTATTCGTCGAATC 59.754 38.462 23.11 10.50 33.95 2.52
2626 3928 5.433855 CCGAGTTTTTGTTTATTCGTCGAA 58.566 37.500 10.61 10.61 0.00 3.71
2628 3930 3.596562 GCCGAGTTTTTGTTTATTCGTCG 59.403 43.478 0.00 0.00 0.00 5.12
2630 3932 4.555348 TGCCGAGTTTTTGTTTATTCGT 57.445 36.364 0.00 0.00 0.00 3.85
2635 3937 8.543774 CATGTAATTTTGCCGAGTTTTTGTTTA 58.456 29.630 0.00 0.00 0.00 2.01
2649 3951 4.794169 ACTCGGTGAACATGTAATTTTGC 58.206 39.130 0.00 0.00 0.00 3.68
2652 3954 4.457949 GGGAACTCGGTGAACATGTAATTT 59.542 41.667 0.00 0.00 0.00 1.82
2656 3958 1.972075 TGGGAACTCGGTGAACATGTA 59.028 47.619 0.00 0.00 0.00 2.29
2664 3966 1.067142 TCTTTCGATGGGAACTCGGTG 60.067 52.381 0.00 0.00 36.78 4.94
2665 3967 1.204941 CTCTTTCGATGGGAACTCGGT 59.795 52.381 0.00 0.00 36.78 4.69
2685 3987 3.553096 CCAGTAGTGATTATGGCCGAGTC 60.553 52.174 0.00 0.00 0.00 3.36
2687 3989 2.628178 TCCAGTAGTGATTATGGCCGAG 59.372 50.000 0.00 0.00 32.63 4.63
2707 4009 3.253432 ACACTCGGCAAAGAGGAAAATTC 59.747 43.478 7.77 0.00 42.31 2.17
2708 4010 3.222603 ACACTCGGCAAAGAGGAAAATT 58.777 40.909 7.77 0.00 42.31 1.82
2709 4011 2.863809 ACACTCGGCAAAGAGGAAAAT 58.136 42.857 7.77 0.00 42.31 1.82
2710 4012 2.341846 ACACTCGGCAAAGAGGAAAA 57.658 45.000 7.77 0.00 42.31 2.29
2711 4013 2.341846 AACACTCGGCAAAGAGGAAA 57.658 45.000 7.77 0.00 42.31 3.13
2712 4014 2.289444 CCTAACACTCGGCAAAGAGGAA 60.289 50.000 7.77 0.00 42.31 3.36
2713 4015 1.275291 CCTAACACTCGGCAAAGAGGA 59.725 52.381 7.77 0.00 42.31 3.71
2714 4016 1.726853 CCTAACACTCGGCAAAGAGG 58.273 55.000 7.77 0.00 42.31 3.69
2715 4017 1.079503 GCCTAACACTCGGCAAAGAG 58.920 55.000 0.00 2.16 45.59 2.85
2716 4018 3.226884 GCCTAACACTCGGCAAAGA 57.773 52.632 0.00 0.00 45.59 2.52
2721 4023 1.079503 CAAAGAGCCTAACACTCGGC 58.920 55.000 0.00 0.00 46.65 5.54
2722 4024 1.079503 GCAAAGAGCCTAACACTCGG 58.920 55.000 0.00 0.00 39.23 4.63
2740 4042 1.498865 CCCGACATAATGCACTCGGC 61.499 60.000 11.27 0.00 43.63 5.54
2741 4043 1.498865 GCCCGACATAATGCACTCGG 61.499 60.000 10.22 10.22 44.42 4.63
2742 4044 0.809636 TGCCCGACATAATGCACTCG 60.810 55.000 0.00 0.00 0.00 4.18
2743 4045 3.079131 TGCCCGACATAATGCACTC 57.921 52.632 0.00 0.00 0.00 3.51
2746 4048 0.809636 CGAGTGCCCGACATAATGCA 60.810 55.000 0.00 0.00 0.00 3.96
2747 4049 1.498865 CCGAGTGCCCGACATAATGC 61.499 60.000 0.00 0.00 0.00 3.56
2748 4050 1.498865 GCCGAGTGCCCGACATAATG 61.499 60.000 0.00 0.00 0.00 1.90
2749 4051 1.227556 GCCGAGTGCCCGACATAAT 60.228 57.895 0.00 0.00 0.00 1.28
2750 4052 2.173758 TTGCCGAGTGCCCGACATAA 62.174 55.000 0.00 0.00 40.16 1.90
2751 4053 1.966901 ATTGCCGAGTGCCCGACATA 61.967 55.000 0.00 0.00 40.16 2.29
2752 4054 1.966901 TATTGCCGAGTGCCCGACAT 61.967 55.000 0.00 0.00 40.16 3.06
2753 4055 2.651105 TATTGCCGAGTGCCCGACA 61.651 57.895 0.00 0.00 40.16 4.35
2754 4056 2.171725 GTATTGCCGAGTGCCCGAC 61.172 63.158 0.00 0.00 40.16 4.79
2755 4057 1.038681 TAGTATTGCCGAGTGCCCGA 61.039 55.000 0.00 0.00 40.16 5.14
2756 4058 0.033504 ATAGTATTGCCGAGTGCCCG 59.966 55.000 0.00 0.00 40.16 6.13
2757 4059 1.344763 AGATAGTATTGCCGAGTGCCC 59.655 52.381 0.00 0.00 40.16 5.36
2758 4060 2.821991 AGATAGTATTGCCGAGTGCC 57.178 50.000 0.00 0.00 40.16 5.01
2759 4061 3.303395 GCAAAGATAGTATTGCCGAGTGC 60.303 47.826 0.00 0.00 44.72 4.40
2760 4062 4.458951 GCAAAGATAGTATTGCCGAGTG 57.541 45.455 0.00 0.00 44.72 3.51
2766 4068 6.516194 TAGGTACTCGGCAAAGATAGTATTGC 60.516 42.308 2.03 2.03 45.06 3.56
2767 4069 5.844004 AGGTACTCGGCAAAGATAGTATTG 58.156 41.667 0.00 0.00 0.00 1.90
2768 4070 7.287235 AGTTAGGTACTCGGCAAAGATAGTATT 59.713 37.037 0.00 0.00 41.75 1.89
2769 4071 6.776603 AGTTAGGTACTCGGCAAAGATAGTAT 59.223 38.462 0.00 0.00 41.75 2.12
2770 4072 6.125029 AGTTAGGTACTCGGCAAAGATAGTA 58.875 40.000 0.00 0.00 41.75 1.82
2771 4073 4.954826 AGTTAGGTACTCGGCAAAGATAGT 59.045 41.667 0.00 0.00 41.75 2.12
2772 4074 5.517322 AGTTAGGTACTCGGCAAAGATAG 57.483 43.478 0.00 0.00 41.75 2.08
2773 4075 5.511234 GAGTTAGGTACTCGGCAAAGATA 57.489 43.478 0.00 0.00 43.59 1.98
2774 4076 4.388378 GAGTTAGGTACTCGGCAAAGAT 57.612 45.455 0.00 0.00 43.59 2.40
2775 4077 3.863142 GAGTTAGGTACTCGGCAAAGA 57.137 47.619 0.00 0.00 43.59 2.52
2784 4086 3.062042 CGTTTTTGCCGAGTTAGGTACT 58.938 45.455 0.00 0.00 46.37 2.73
2785 4087 2.411935 GCGTTTTTGCCGAGTTAGGTAC 60.412 50.000 0.00 0.00 0.00 3.34
2786 4088 1.799994 GCGTTTTTGCCGAGTTAGGTA 59.200 47.619 0.00 0.00 0.00 3.08
2787 4089 0.589708 GCGTTTTTGCCGAGTTAGGT 59.410 50.000 0.00 0.00 0.00 3.08
2788 4090 0.452122 CGCGTTTTTGCCGAGTTAGG 60.452 55.000 0.00 0.00 0.00 2.69
2789 4091 0.509499 TCGCGTTTTTGCCGAGTTAG 59.491 50.000 5.77 0.00 0.00 2.34
2790 4092 0.935898 TTCGCGTTTTTGCCGAGTTA 59.064 45.000 5.77 0.00 0.00 2.24
2791 4093 0.099082 TTTCGCGTTTTTGCCGAGTT 59.901 45.000 5.77 0.00 0.00 3.01
2792 4094 0.309612 ATTTCGCGTTTTTGCCGAGT 59.690 45.000 5.77 0.00 0.00 4.18
2793 4095 1.382088 GAATTTCGCGTTTTTGCCGAG 59.618 47.619 5.77 0.00 0.00 4.63
2794 4096 1.400550 GAATTTCGCGTTTTTGCCGA 58.599 45.000 5.77 0.00 0.00 5.54
2795 4097 0.088858 CGAATTTCGCGTTTTTGCCG 59.911 50.000 5.77 0.00 31.14 5.69
2796 4098 0.433115 CCGAATTTCGCGTTTTTGCC 59.567 50.000 13.26 0.00 38.82 4.52
2797 4099 0.179285 GCCGAATTTCGCGTTTTTGC 60.179 50.000 13.26 5.82 38.82 3.68
2798 4100 1.124462 TGCCGAATTTCGCGTTTTTG 58.876 45.000 13.26 2.45 38.82 2.44
2799 4101 1.841450 TTGCCGAATTTCGCGTTTTT 58.159 40.000 13.26 0.00 38.82 1.94
2800 4102 1.519343 GTTTGCCGAATTTCGCGTTTT 59.481 42.857 13.26 0.00 38.82 2.43
2801 4103 1.125270 GTTTGCCGAATTTCGCGTTT 58.875 45.000 13.26 0.00 38.82 3.60
2802 4104 0.029567 TGTTTGCCGAATTTCGCGTT 59.970 45.000 13.26 0.00 38.82 4.84
2803 4105 0.239879 ATGTTTGCCGAATTTCGCGT 59.760 45.000 13.26 0.00 38.82 6.01
2804 4106 0.634731 CATGTTTGCCGAATTTCGCG 59.365 50.000 13.26 0.00 38.82 5.87
2805 4107 1.696988 ACATGTTTGCCGAATTTCGC 58.303 45.000 13.26 9.32 38.82 4.70
2806 4108 4.078363 AGTACATGTTTGCCGAATTTCG 57.922 40.909 11.81 11.81 40.07 3.46
2807 4109 6.139672 CAAAGTACATGTTTGCCGAATTTC 57.860 37.500 2.30 0.00 0.00 2.17
2816 4118 3.003275 ACACTCGGCAAAGTACATGTTTG 59.997 43.478 2.30 3.78 37.85 2.93
2817 4119 3.211045 ACACTCGGCAAAGTACATGTTT 58.789 40.909 2.30 0.00 0.00 2.83
2818 4120 2.806244 GACACTCGGCAAAGTACATGTT 59.194 45.455 2.30 0.00 0.00 2.71
2819 4121 2.224185 TGACACTCGGCAAAGTACATGT 60.224 45.455 2.69 2.69 0.00 3.21
2820 4122 2.412870 TGACACTCGGCAAAGTACATG 58.587 47.619 0.00 0.00 0.00 3.21
2821 4123 2.831685 TGACACTCGGCAAAGTACAT 57.168 45.000 0.00 0.00 0.00 2.29
2822 4124 2.412870 CATGACACTCGGCAAAGTACA 58.587 47.619 0.00 0.00 0.00 2.90
2823 4125 1.732259 CCATGACACTCGGCAAAGTAC 59.268 52.381 0.00 0.00 0.00 2.73
2824 4126 1.621317 TCCATGACACTCGGCAAAGTA 59.379 47.619 0.00 0.00 0.00 2.24
2825 4127 0.396435 TCCATGACACTCGGCAAAGT 59.604 50.000 0.00 0.00 0.00 2.66
2826 4128 1.742761 ATCCATGACACTCGGCAAAG 58.257 50.000 0.00 0.00 0.00 2.77
2827 4129 3.342377 TTATCCATGACACTCGGCAAA 57.658 42.857 0.00 0.00 0.00 3.68
2828 4130 3.342377 TTTATCCATGACACTCGGCAA 57.658 42.857 0.00 0.00 0.00 4.52
2829 4131 3.006940 GTTTTATCCATGACACTCGGCA 58.993 45.455 0.00 0.00 0.00 5.69
2830 4132 2.030457 CGTTTTATCCATGACACTCGGC 59.970 50.000 0.00 0.00 0.00 5.54
2831 4133 2.030457 GCGTTTTATCCATGACACTCGG 59.970 50.000 0.00 0.00 0.00 4.63
2832 4134 2.930040 AGCGTTTTATCCATGACACTCG 59.070 45.455 0.00 0.00 0.00 4.18
2833 4135 3.000322 CGAGCGTTTTATCCATGACACTC 60.000 47.826 0.00 0.00 0.00 3.51
2834 4136 2.930040 CGAGCGTTTTATCCATGACACT 59.070 45.455 0.00 0.00 0.00 3.55
2835 4137 2.030457 CCGAGCGTTTTATCCATGACAC 59.970 50.000 0.00 0.00 0.00 3.67
2836 4138 2.276201 CCGAGCGTTTTATCCATGACA 58.724 47.619 0.00 0.00 0.00 3.58
2837 4139 2.277084 ACCGAGCGTTTTATCCATGAC 58.723 47.619 0.00 0.00 0.00 3.06
2838 4140 2.684001 ACCGAGCGTTTTATCCATGA 57.316 45.000 0.00 0.00 0.00 3.07
2839 4141 4.868450 TTTACCGAGCGTTTTATCCATG 57.132 40.909 0.00 0.00 0.00 3.66
2840 4142 4.696402 TGTTTTACCGAGCGTTTTATCCAT 59.304 37.500 0.00 0.00 0.00 3.41
2841 4143 4.063689 TGTTTTACCGAGCGTTTTATCCA 58.936 39.130 0.00 0.00 0.00 3.41
2842 4144 4.666928 TGTTTTACCGAGCGTTTTATCC 57.333 40.909 0.00 0.00 0.00 2.59
2843 4145 5.442402 TGTTGTTTTACCGAGCGTTTTATC 58.558 37.500 0.00 0.00 0.00 1.75
2844 4146 5.421212 TGTTGTTTTACCGAGCGTTTTAT 57.579 34.783 0.00 0.00 0.00 1.40
2845 4147 4.871993 TGTTGTTTTACCGAGCGTTTTA 57.128 36.364 0.00 0.00 0.00 1.52
2846 4148 3.761311 TGTTGTTTTACCGAGCGTTTT 57.239 38.095 0.00 0.00 0.00 2.43
2847 4149 3.761311 TTGTTGTTTTACCGAGCGTTT 57.239 38.095 0.00 0.00 0.00 3.60
2848 4150 3.761311 TTTGTTGTTTTACCGAGCGTT 57.239 38.095 0.00 0.00 0.00 4.84
2849 4151 3.761311 TTTTGTTGTTTTACCGAGCGT 57.239 38.095 0.00 0.00 0.00 5.07
2850 4152 4.143906 CGAATTTTGTTGTTTTACCGAGCG 60.144 41.667 0.00 0.00 0.00 5.03
2851 4153 4.147479 CCGAATTTTGTTGTTTTACCGAGC 59.853 41.667 0.00 0.00 0.00 5.03
2852 4154 4.147479 GCCGAATTTTGTTGTTTTACCGAG 59.853 41.667 0.00 0.00 0.00 4.63
2853 4155 4.043073 GCCGAATTTTGTTGTTTTACCGA 58.957 39.130 0.00 0.00 0.00 4.69
2854 4156 3.797256 TGCCGAATTTTGTTGTTTTACCG 59.203 39.130 0.00 0.00 0.00 4.02
2855 4157 5.720261 TTGCCGAATTTTGTTGTTTTACC 57.280 34.783 0.00 0.00 0.00 2.85
2856 4158 6.534934 TGTTTGCCGAATTTTGTTGTTTTAC 58.465 32.000 0.00 0.00 0.00 2.01
2857 4159 6.183360 CCTGTTTGCCGAATTTTGTTGTTTTA 60.183 34.615 0.00 0.00 0.00 1.52
2858 4160 5.391416 CCTGTTTGCCGAATTTTGTTGTTTT 60.391 36.000 0.00 0.00 0.00 2.43
2859 4161 4.094146 CCTGTTTGCCGAATTTTGTTGTTT 59.906 37.500 0.00 0.00 0.00 2.83
2860 4162 3.620821 CCTGTTTGCCGAATTTTGTTGTT 59.379 39.130 0.00 0.00 0.00 2.83
2861 4163 3.194062 CCTGTTTGCCGAATTTTGTTGT 58.806 40.909 0.00 0.00 0.00 3.32
2862 4164 2.543430 CCCTGTTTGCCGAATTTTGTTG 59.457 45.455 0.00 0.00 0.00 3.33
2863 4165 2.832563 CCCTGTTTGCCGAATTTTGTT 58.167 42.857 0.00 0.00 0.00 2.83
2864 4166 1.540146 GCCCTGTTTGCCGAATTTTGT 60.540 47.619 0.00 0.00 0.00 2.83
2865 4167 1.147473 GCCCTGTTTGCCGAATTTTG 58.853 50.000 0.00 0.00 0.00 2.44
2866 4168 1.047801 AGCCCTGTTTGCCGAATTTT 58.952 45.000 0.00 0.00 0.00 1.82
2867 4169 1.047801 AAGCCCTGTTTGCCGAATTT 58.952 45.000 0.00 0.00 0.00 1.82
2868 4170 1.047801 AAAGCCCTGTTTGCCGAATT 58.952 45.000 0.00 0.00 0.00 2.17
2869 4171 0.318120 CAAAGCCCTGTTTGCCGAAT 59.682 50.000 0.00 0.00 30.94 3.34
2870 4172 1.739049 CAAAGCCCTGTTTGCCGAA 59.261 52.632 0.00 0.00 30.94 4.30
2871 4173 3.442441 CAAAGCCCTGTTTGCCGA 58.558 55.556 0.00 0.00 30.94 5.54
2883 4185 2.162716 CCGAGTGTAGTGGCAAAGC 58.837 57.895 0.00 0.00 0.00 3.51
2889 4191 1.156736 CCTTTTGCCGAGTGTAGTGG 58.843 55.000 0.00 0.00 0.00 4.00
2890 4192 1.156736 CCCTTTTGCCGAGTGTAGTG 58.843 55.000 0.00 0.00 0.00 2.74
2891 4193 0.036306 CCCCTTTTGCCGAGTGTAGT 59.964 55.000 0.00 0.00 0.00 2.73
2892 4194 0.323629 TCCCCTTTTGCCGAGTGTAG 59.676 55.000 0.00 0.00 0.00 2.74
2893 4195 0.988832 ATCCCCTTTTGCCGAGTGTA 59.011 50.000 0.00 0.00 0.00 2.90
2894 4196 0.322546 GATCCCCTTTTGCCGAGTGT 60.323 55.000 0.00 0.00 0.00 3.55
2895 4197 0.035056 AGATCCCCTTTTGCCGAGTG 60.035 55.000 0.00 0.00 0.00 3.51
2896 4198 0.698818 AAGATCCCCTTTTGCCGAGT 59.301 50.000 0.00 0.00 0.00 4.18
2897 4199 1.839424 AAAGATCCCCTTTTGCCGAG 58.161 50.000 0.00 0.00 42.13 4.63
2898 4200 2.619590 GGTAAAGATCCCCTTTTGCCGA 60.620 50.000 0.00 0.00 42.13 5.54
2899 4201 1.749063 GGTAAAGATCCCCTTTTGCCG 59.251 52.381 0.00 0.00 42.13 5.69
2900 4202 1.749063 CGGTAAAGATCCCCTTTTGCC 59.251 52.381 0.00 3.18 42.13 4.52
2901 4203 2.683362 CTCGGTAAAGATCCCCTTTTGC 59.317 50.000 0.00 0.00 42.13 3.68
2902 4204 3.689649 CACTCGGTAAAGATCCCCTTTTG 59.310 47.826 0.00 0.00 42.13 2.44
2903 4205 3.329814 ACACTCGGTAAAGATCCCCTTTT 59.670 43.478 0.00 0.00 42.13 2.27
2904 4206 2.910977 ACACTCGGTAAAGATCCCCTTT 59.089 45.455 0.00 0.00 46.21 3.11
2905 4207 2.500504 GACACTCGGTAAAGATCCCCTT 59.499 50.000 0.00 0.00 36.47 3.95
2906 4208 2.108970 GACACTCGGTAAAGATCCCCT 58.891 52.381 0.00 0.00 0.00 4.79
2907 4209 1.829222 TGACACTCGGTAAAGATCCCC 59.171 52.381 0.00 0.00 0.00 4.81
2908 4210 2.734492 CGTGACACTCGGTAAAGATCCC 60.734 54.545 3.68 0.00 0.00 3.85
2909 4211 2.527100 CGTGACACTCGGTAAAGATCC 58.473 52.381 3.68 0.00 0.00 3.36
2910 4212 1.918609 GCGTGACACTCGGTAAAGATC 59.081 52.381 3.68 0.00 0.00 2.75
2911 4213 1.544691 AGCGTGACACTCGGTAAAGAT 59.455 47.619 3.68 0.00 37.26 2.40
2912 4214 0.956633 AGCGTGACACTCGGTAAAGA 59.043 50.000 3.68 0.00 37.26 2.52
2913 4215 1.337821 GAGCGTGACACTCGGTAAAG 58.662 55.000 3.68 0.00 39.08 1.85
2914 4216 3.484524 GAGCGTGACACTCGGTAAA 57.515 52.632 3.68 0.00 39.08 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.