Multiple sequence alignment - TraesCS2B01G217400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G217400 chr2B 100.000 9167 0 0 1 9167 206108893 206118059 0.000000e+00 16929.0
1 TraesCS2B01G217400 chr2B 94.015 401 21 2 8769 9167 525523963 525523564 1.020000e-168 604.0
2 TraesCS2B01G217400 chr2B 94.000 400 23 1 8768 9167 525559524 525559922 1.020000e-168 604.0
3 TraesCS2B01G217400 chr2B 93.000 400 26 2 8769 9167 690994027 690994425 4.770000e-162 582.0
4 TraesCS2B01G217400 chr2B 95.652 46 1 1 7026 7070 572791723 572791768 1.280000e-08 73.1
5 TraesCS2B01G217400 chr2B 93.478 46 2 1 7026 7070 152179387 152179432 5.940000e-07 67.6
6 TraesCS2B01G217400 chr2B 96.774 31 1 0 5361 5391 741446511 741446541 1.700000e-02 52.8
7 TraesCS2B01G217400 chr2D 95.701 8653 230 55 191 8771 145884776 145893358 0.000000e+00 13788.0
8 TraesCS2B01G217400 chr2D 92.784 97 5 1 5835 5929 242331541 242331445 1.240000e-28 139.0
9 TraesCS2B01G217400 chr2D 93.506 77 5 0 2115 2191 145886629 145886705 2.090000e-21 115.0
10 TraesCS2B01G217400 chr2A 95.123 6418 209 40 240 6587 156375991 156369608 0.000000e+00 10022.0
11 TraesCS2B01G217400 chr2A 91.478 1549 75 30 7231 8771 156368680 156367181 0.000000e+00 2076.0
12 TraesCS2B01G217400 chr2A 94.554 661 27 6 6574 7230 156369418 156368763 0.000000e+00 1013.0
13 TraesCS2B01G217400 chr2A 94.805 77 4 0 2115 2191 156374163 156374087 4.500000e-23 121.0
14 TraesCS2B01G217400 chr2A 97.826 46 0 1 7026 7070 632952953 632952998 2.740000e-10 78.7
15 TraesCS2B01G217400 chr2A 97.561 41 1 0 7025 7065 550866096 550866056 4.590000e-08 71.3
16 TraesCS2B01G217400 chr1B 96.742 399 13 0 8769 9167 306888280 306887882 0.000000e+00 665.0
17 TraesCS2B01G217400 chr1B 92.784 97 5 1 5835 5929 411568789 411568693 1.240000e-28 139.0
18 TraesCS2B01G217400 chr1B 94.737 57 0 1 5335 5388 446029277 446029221 1.640000e-12 86.1
19 TraesCS2B01G217400 chr1B 92.593 54 1 3 7026 7077 115751942 115751994 3.550000e-09 75.0
20 TraesCS2B01G217400 chr1B 91.892 37 3 0 3807 3843 406340807 406340843 1.700000e-02 52.8
21 TraesCS2B01G217400 chrUn 93.750 400 21 4 8769 9166 352657394 352657791 1.700000e-166 597.0
22 TraesCS2B01G217400 chrUn 93.750 400 21 4 8769 9166 449510960 449510563 1.700000e-166 597.0
23 TraesCS2B01G217400 chrUn 93.500 400 25 1 8769 9167 47864433 47864034 2.200000e-165 593.0
24 TraesCS2B01G217400 chr3B 93.250 400 25 2 8769 9167 44403044 44402646 1.030000e-163 588.0
25 TraesCS2B01G217400 chr3B 93.250 400 25 2 8769 9167 228211869 228211471 1.030000e-163 588.0
26 TraesCS2B01G217400 chr3B 95.652 46 1 1 7026 7070 10956959 10957004 1.280000e-08 73.1
27 TraesCS2B01G217400 chr7A 92.373 118 5 3 5829 5942 581374242 581374359 2.050000e-36 165.0
28 TraesCS2B01G217400 chr7A 100.000 37 0 0 5352 5388 473011837 473011801 1.650000e-07 69.4
29 TraesCS2B01G217400 chr7A 95.349 43 1 1 3807 3848 625617735 625617693 5.940000e-07 67.6
30 TraesCS2B01G217400 chr3A 93.137 102 4 2 5834 5932 589797202 589797303 7.420000e-31 147.0
31 TraesCS2B01G217400 chr3A 94.118 85 5 0 4962 5046 213131980 213131896 7.470000e-26 130.0
32 TraesCS2B01G217400 chr7B 92.308 104 5 2 5829 5929 539218276 539218379 2.670000e-30 145.0
33 TraesCS2B01G217400 chr7B 93.814 97 4 1 5835 5929 685247257 685247161 2.670000e-30 145.0
34 TraesCS2B01G217400 chr7B 90.625 96 9 0 4962 5057 156955452 156955547 2.690000e-25 128.0
35 TraesCS2B01G217400 chr7B 96.970 33 0 1 5362 5393 668366275 668366307 5.000000e-03 54.7
36 TraesCS2B01G217400 chr7B 96.970 33 0 1 5362 5393 668385021 668385053 5.000000e-03 54.7
37 TraesCS2B01G217400 chr7B 100.000 28 0 0 167 194 12189808 12189835 1.700000e-02 52.8
38 TraesCS2B01G217400 chr6D 92.929 99 5 2 5833 5929 41640907 41640809 9.590000e-30 143.0
39 TraesCS2B01G217400 chr6D 95.455 88 3 1 4960 5046 84938456 84938543 1.240000e-28 139.0
40 TraesCS2B01G217400 chr6D 92.708 96 4 3 4962 5055 84938543 84938449 1.610000e-27 135.0
41 TraesCS2B01G217400 chr6D 89.362 94 10 0 4953 5046 301102143 301102236 1.620000e-22 119.0
42 TraesCS2B01G217400 chr5B 93.750 96 5 1 5835 5929 34252183 34252088 9.590000e-30 143.0
43 TraesCS2B01G217400 chr4A 89.474 95 10 0 4962 5056 47630472 47630566 4.500000e-23 121.0
44 TraesCS2B01G217400 chr4A 96.970 33 0 1 5330 5362 699895939 699895970 5.000000e-03 54.7
45 TraesCS2B01G217400 chr5D 87.037 108 11 3 4945 5049 362406774 362406667 1.620000e-22 119.0
46 TraesCS2B01G217400 chr5D 100.000 32 0 0 5334 5365 175781918 175781949 9.940000e-05 60.2
47 TraesCS2B01G217400 chr1D 92.982 57 1 1 5335 5388 331917701 331917645 7.630000e-11 80.5
48 TraesCS2B01G217400 chr1D 84.058 69 3 4 5328 5388 298637798 298637730 9.940000e-05 60.2
49 TraesCS2B01G217400 chr1D 91.892 37 3 0 3807 3843 301232565 301232601 1.700000e-02 52.8
50 TraesCS2B01G217400 chr7D 94.872 39 2 0 3807 3845 545222037 545221999 2.760000e-05 62.1
51 TraesCS2B01G217400 chr7D 94.595 37 2 0 3807 3843 397992142 397992106 3.580000e-04 58.4
52 TraesCS2B01G217400 chr6A 94.737 38 0 2 5330 5365 529567117 529567080 3.580000e-04 58.4
53 TraesCS2B01G217400 chr4B 85.000 60 6 3 7013 7070 315738093 315738151 3.580000e-04 58.4
54 TraesCS2B01G217400 chr1A 94.737 38 0 2 5328 5363 372532630 372532593 3.580000e-04 58.4
55 TraesCS2B01G217400 chr1A 91.892 37 3 0 3807 3843 376137934 376137970 1.700000e-02 52.8
56 TraesCS2B01G217400 chr4D 100.000 30 0 0 3816 3845 495974494 495974465 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G217400 chr2B 206108893 206118059 9166 False 16929 16929 100.000 1 9167 1 chr2B.!!$F2 9166
1 TraesCS2B01G217400 chr2D 145884776 145893358 8582 False 13788 13788 95.701 191 8771 1 chr2D.!!$F1 8580
2 TraesCS2B01G217400 chr2A 156367181 156375991 8810 True 3308 10022 93.990 240 8771 4 chr2A.!!$R2 8531

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
46 47 0.038166 ACCGCTGTCCCATGTTTCAT 59.962 50.000 0.00 0.00 0.00 2.57 F
1368 1416 0.104855 TTCCGATGCGCATTAGCTCT 59.895 50.000 26.12 0.00 39.10 4.09 F
1550 1602 0.322546 GTCTTTTGGAGCGTCCCCAT 60.323 55.000 2.23 0.00 35.03 4.00 F
1681 1733 1.076513 ACATTCCTTTTACGGGGGCTT 59.923 47.619 0.00 0.00 0.00 4.35 F
1923 1975 1.134670 GCCTAGTGCCCTAGTCACTTG 60.135 57.143 16.79 14.81 41.61 3.16 F
3673 3738 1.388547 TTTACGATCCCATTGCTGCC 58.611 50.000 0.00 0.00 0.00 4.85 F
4329 4397 2.604174 GCCCCGTGTTGTCGTTCAG 61.604 63.158 0.00 0.00 0.00 3.02 F
5498 5584 0.578683 CGAAGTCCATATGTGCAGCG 59.421 55.000 1.24 0.00 0.00 5.18 F
5992 6078 1.032014 ACCGTGCCATATGAAATGCC 58.968 50.000 3.65 0.00 0.00 4.40 F
7483 7893 0.036022 TCAACCACATGGATCGCACA 59.964 50.000 4.53 0.00 38.94 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1531 1583 0.322546 ATGGGGACGCTCCAAAAGAC 60.323 55.000 2.50 0.00 38.64 3.01 R
2551 2613 3.181434 GGCCAGATATATTTGTGGGGTCA 60.181 47.826 10.66 0.00 0.00 4.02 R
2759 2821 5.773575 AGACGTAATGCTACATATGGACAG 58.226 41.667 7.80 2.48 0.00 3.51 R
3658 3723 0.383231 GAAAGGCAGCAATGGGATCG 59.617 55.000 0.00 0.00 0.00 3.69 R
3791 3856 6.053632 TGGAGTGAGAATTAGATTTGAGCA 57.946 37.500 0.00 0.00 0.00 4.26 R
4519 4588 2.223144 TGTCGCAAAATACAGAGTGCAC 59.777 45.455 9.40 9.40 36.80 4.57 R
6206 6292 0.248215 GAAAGCCGATGATGCGTTGG 60.248 55.000 0.00 0.00 30.57 3.77 R
6638 6927 0.250338 GTGGGAGTGAACTCACCACC 60.250 60.000 25.44 16.08 46.71 4.61 R
7577 7999 0.183492 ACTCCTGCAGCCAAGAACAA 59.817 50.000 8.66 0.00 0.00 2.83 R
9102 9544 0.035317 TCATTGGCTCGTTGCAGACT 59.965 50.000 5.65 0.00 45.15 3.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.499197 TCGTTAATTTGCTGAGTGCCA 58.501 42.857 0.00 0.00 42.00 4.92
21 22 2.225491 TCGTTAATTTGCTGAGTGCCAC 59.775 45.455 0.00 0.00 42.00 5.01
22 23 2.584791 GTTAATTTGCTGAGTGCCACG 58.415 47.619 0.00 0.00 42.00 4.94
23 24 0.521291 TAATTTGCTGAGTGCCACGC 59.479 50.000 0.00 0.00 42.00 5.34
24 25 2.146073 AATTTGCTGAGTGCCACGCC 62.146 55.000 0.00 0.00 42.00 5.68
25 26 4.560743 TTGCTGAGTGCCACGCCA 62.561 61.111 0.00 0.00 42.00 5.69
26 27 4.560743 TGCTGAGTGCCACGCCAA 62.561 61.111 0.00 0.00 42.00 4.52
27 28 3.286751 GCTGAGTGCCACGCCAAA 61.287 61.111 0.00 0.00 35.15 3.28
28 29 2.639286 CTGAGTGCCACGCCAAAC 59.361 61.111 0.00 0.00 0.00 2.93
29 30 2.904866 TGAGTGCCACGCCAAACC 60.905 61.111 0.00 0.00 0.00 3.27
30 31 4.025401 GAGTGCCACGCCAAACCG 62.025 66.667 0.00 0.00 0.00 4.44
35 36 4.025401 CCACGCCAAACCGCTGTC 62.025 66.667 0.00 0.00 0.00 3.51
36 37 4.025401 CACGCCAAACCGCTGTCC 62.025 66.667 0.00 0.00 0.00 4.02
39 40 2.676471 GCCAAACCGCTGTCCCAT 60.676 61.111 0.00 0.00 0.00 4.00
40 41 2.993471 GCCAAACCGCTGTCCCATG 61.993 63.158 0.00 0.00 0.00 3.66
41 42 1.603455 CCAAACCGCTGTCCCATGT 60.603 57.895 0.00 0.00 0.00 3.21
42 43 1.178534 CCAAACCGCTGTCCCATGTT 61.179 55.000 0.00 0.00 0.00 2.71
43 44 0.673437 CAAACCGCTGTCCCATGTTT 59.327 50.000 0.00 0.00 0.00 2.83
44 45 0.958822 AAACCGCTGTCCCATGTTTC 59.041 50.000 0.00 0.00 0.00 2.78
45 46 0.179004 AACCGCTGTCCCATGTTTCA 60.179 50.000 0.00 0.00 0.00 2.69
46 47 0.038166 ACCGCTGTCCCATGTTTCAT 59.962 50.000 0.00 0.00 0.00 2.57
47 48 0.452987 CCGCTGTCCCATGTTTCATG 59.547 55.000 3.11 3.11 0.00 3.07
48 49 1.452110 CGCTGTCCCATGTTTCATGA 58.548 50.000 10.75 0.00 0.00 3.07
49 50 2.019249 CGCTGTCCCATGTTTCATGAT 58.981 47.619 10.75 0.00 0.00 2.45
50 51 2.223409 CGCTGTCCCATGTTTCATGATG 60.223 50.000 10.75 0.00 0.00 3.07
51 52 2.100252 GCTGTCCCATGTTTCATGATGG 59.900 50.000 10.75 6.15 39.18 3.51
52 53 3.623703 CTGTCCCATGTTTCATGATGGA 58.376 45.455 13.62 7.29 41.63 3.41
53 54 4.018490 CTGTCCCATGTTTCATGATGGAA 58.982 43.478 13.62 0.00 41.63 3.53
54 55 4.612401 TGTCCCATGTTTCATGATGGAAT 58.388 39.130 13.62 0.00 41.63 3.01
55 56 5.764432 TGTCCCATGTTTCATGATGGAATA 58.236 37.500 13.62 0.00 41.63 1.75
56 57 6.375418 TGTCCCATGTTTCATGATGGAATAT 58.625 36.000 13.62 0.00 41.63 1.28
57 58 7.525165 TGTCCCATGTTTCATGATGGAATATA 58.475 34.615 13.62 0.00 41.63 0.86
58 59 8.003629 TGTCCCATGTTTCATGATGGAATATAA 58.996 33.333 13.62 0.00 41.63 0.98
59 60 8.517878 GTCCCATGTTTCATGATGGAATATAAG 58.482 37.037 13.62 0.00 41.63 1.73
60 61 8.447200 TCCCATGTTTCATGATGGAATATAAGA 58.553 33.333 13.62 0.00 41.63 2.10
61 62 9.251440 CCCATGTTTCATGATGGAATATAAGAT 57.749 33.333 13.62 0.00 41.63 2.40
88 89 9.783256 CTATTTTTCTGTTCCTAATTTTACGGG 57.217 33.333 0.00 0.00 0.00 5.28
89 90 7.820578 TTTTTCTGTTCCTAATTTTACGGGA 57.179 32.000 0.00 0.00 0.00 5.14
90 91 7.443259 TTTTCTGTTCCTAATTTTACGGGAG 57.557 36.000 0.00 0.00 0.00 4.30
91 92 4.510571 TCTGTTCCTAATTTTACGGGAGC 58.489 43.478 0.00 0.00 0.00 4.70
92 93 4.020039 TCTGTTCCTAATTTTACGGGAGCA 60.020 41.667 0.00 0.00 36.88 4.26
93 94 4.653868 TGTTCCTAATTTTACGGGAGCAA 58.346 39.130 0.00 0.00 36.44 3.91
94 95 4.456566 TGTTCCTAATTTTACGGGAGCAAC 59.543 41.667 0.00 0.00 36.44 4.17
95 96 4.289238 TCCTAATTTTACGGGAGCAACA 57.711 40.909 0.00 0.00 0.00 3.33
96 97 4.258543 TCCTAATTTTACGGGAGCAACAG 58.741 43.478 0.00 0.00 0.00 3.16
97 98 4.020039 TCCTAATTTTACGGGAGCAACAGA 60.020 41.667 0.00 0.00 0.00 3.41
98 99 4.094442 CCTAATTTTACGGGAGCAACAGAC 59.906 45.833 0.00 0.00 0.00 3.51
99 100 1.504359 TTTTACGGGAGCAACAGACG 58.496 50.000 0.00 0.00 0.00 4.18
100 101 0.390124 TTTACGGGAGCAACAGACGT 59.610 50.000 0.00 0.00 41.10 4.34
101 102 1.246649 TTACGGGAGCAACAGACGTA 58.753 50.000 0.00 0.00 38.79 3.57
102 103 1.246649 TACGGGAGCAACAGACGTAA 58.753 50.000 0.00 0.00 37.13 3.18
103 104 0.390124 ACGGGAGCAACAGACGTAAA 59.610 50.000 0.00 0.00 35.85 2.01
104 105 1.202557 ACGGGAGCAACAGACGTAAAA 60.203 47.619 0.00 0.00 35.85 1.52
105 106 2.073816 CGGGAGCAACAGACGTAAAAT 58.926 47.619 0.00 0.00 0.00 1.82
106 107 3.255725 CGGGAGCAACAGACGTAAAATA 58.744 45.455 0.00 0.00 0.00 1.40
107 108 3.306166 CGGGAGCAACAGACGTAAAATAG 59.694 47.826 0.00 0.00 0.00 1.73
108 109 3.621715 GGGAGCAACAGACGTAAAATAGG 59.378 47.826 0.00 0.00 0.00 2.57
109 110 4.501071 GGAGCAACAGACGTAAAATAGGA 58.499 43.478 0.00 0.00 0.00 2.94
110 111 4.933400 GGAGCAACAGACGTAAAATAGGAA 59.067 41.667 0.00 0.00 0.00 3.36
111 112 5.063564 GGAGCAACAGACGTAAAATAGGAAG 59.936 44.000 0.00 0.00 0.00 3.46
112 113 5.548406 AGCAACAGACGTAAAATAGGAAGT 58.452 37.500 0.00 0.00 0.00 3.01
113 114 5.638234 AGCAACAGACGTAAAATAGGAAGTC 59.362 40.000 0.00 0.00 0.00 3.01
114 115 5.638234 GCAACAGACGTAAAATAGGAAGTCT 59.362 40.000 0.00 0.00 39.24 3.24
118 119 7.050281 CAGACGTAAAATAGGAAGTCTGTTG 57.950 40.000 13.37 0.00 45.98 3.33
119 120 6.645415 CAGACGTAAAATAGGAAGTCTGTTGT 59.355 38.462 13.37 0.00 45.98 3.32
120 121 7.811236 CAGACGTAAAATAGGAAGTCTGTTGTA 59.189 37.037 13.37 0.00 45.98 2.41
121 122 7.811713 AGACGTAAAATAGGAAGTCTGTTGTAC 59.188 37.037 0.00 0.00 37.54 2.90
122 123 7.436118 ACGTAAAATAGGAAGTCTGTTGTACA 58.564 34.615 0.00 0.00 37.22 2.90
124 125 7.063074 CGTAAAATAGGAAGTCTGTTGTACAGG 59.937 40.741 6.96 0.00 45.94 4.00
125 126 5.422214 AATAGGAAGTCTGTTGTACAGGG 57.578 43.478 6.96 0.00 45.94 4.45
126 127 2.690840 AGGAAGTCTGTTGTACAGGGT 58.309 47.619 6.96 0.00 45.94 4.34
127 128 2.368875 AGGAAGTCTGTTGTACAGGGTG 59.631 50.000 6.96 0.00 45.94 4.61
128 129 2.104281 GGAAGTCTGTTGTACAGGGTGT 59.896 50.000 6.96 0.00 45.94 4.16
129 130 3.391049 GAAGTCTGTTGTACAGGGTGTC 58.609 50.000 6.96 0.00 45.94 3.67
130 131 2.679082 AGTCTGTTGTACAGGGTGTCT 58.321 47.619 6.96 0.00 45.94 3.41
131 132 3.039011 AGTCTGTTGTACAGGGTGTCTT 58.961 45.455 6.96 0.00 45.94 3.01
132 133 3.454812 AGTCTGTTGTACAGGGTGTCTTT 59.545 43.478 6.96 0.00 45.94 2.52
133 134 4.652421 AGTCTGTTGTACAGGGTGTCTTTA 59.348 41.667 6.96 0.00 45.94 1.85
134 135 4.748600 GTCTGTTGTACAGGGTGTCTTTAC 59.251 45.833 6.96 0.00 45.94 2.01
135 136 4.652421 TCTGTTGTACAGGGTGTCTTTACT 59.348 41.667 6.96 0.00 45.94 2.24
136 137 4.699637 TGTTGTACAGGGTGTCTTTACTG 58.300 43.478 0.00 0.00 37.01 2.74
137 138 3.396260 TGTACAGGGTGTCTTTACTGC 57.604 47.619 0.00 0.00 34.40 4.40
138 139 2.969950 TGTACAGGGTGTCTTTACTGCT 59.030 45.455 0.00 0.00 34.40 4.24
139 140 2.550830 ACAGGGTGTCTTTACTGCTG 57.449 50.000 0.00 0.00 34.40 4.41
140 141 1.768870 ACAGGGTGTCTTTACTGCTGT 59.231 47.619 0.66 0.66 34.40 4.40
141 142 2.224305 ACAGGGTGTCTTTACTGCTGTC 60.224 50.000 0.00 0.00 34.40 3.51
142 143 2.037772 CAGGGTGTCTTTACTGCTGTCT 59.962 50.000 0.00 0.00 0.00 3.41
143 144 3.258372 CAGGGTGTCTTTACTGCTGTCTA 59.742 47.826 0.00 0.00 0.00 2.59
144 145 3.258622 AGGGTGTCTTTACTGCTGTCTAC 59.741 47.826 0.00 0.00 0.00 2.59
145 146 3.006537 GGGTGTCTTTACTGCTGTCTACA 59.993 47.826 0.00 0.00 0.00 2.74
146 147 4.322801 GGGTGTCTTTACTGCTGTCTACAT 60.323 45.833 0.00 0.00 0.00 2.29
147 148 5.105473 GGGTGTCTTTACTGCTGTCTACATA 60.105 44.000 0.00 0.00 0.00 2.29
148 149 6.407074 GGGTGTCTTTACTGCTGTCTACATAT 60.407 42.308 0.00 0.00 0.00 1.78
149 150 6.477033 GGTGTCTTTACTGCTGTCTACATATG 59.523 42.308 0.00 0.00 0.00 1.78
150 151 7.258441 GTGTCTTTACTGCTGTCTACATATGA 58.742 38.462 10.38 0.00 0.00 2.15
151 152 7.923344 GTGTCTTTACTGCTGTCTACATATGAT 59.077 37.037 10.38 0.00 0.00 2.45
152 153 8.478066 TGTCTTTACTGCTGTCTACATATGATT 58.522 33.333 10.38 0.00 0.00 2.57
153 154 8.759641 GTCTTTACTGCTGTCTACATATGATTG 58.240 37.037 10.38 0.00 0.00 2.67
154 155 7.928167 TCTTTACTGCTGTCTACATATGATTGG 59.072 37.037 10.38 0.00 0.00 3.16
155 156 5.620738 ACTGCTGTCTACATATGATTGGT 57.379 39.130 10.38 0.00 0.00 3.67
156 157 6.731292 ACTGCTGTCTACATATGATTGGTA 57.269 37.500 10.38 0.00 0.00 3.25
157 158 7.308450 ACTGCTGTCTACATATGATTGGTAT 57.692 36.000 10.38 0.00 0.00 2.73
158 159 8.422577 ACTGCTGTCTACATATGATTGGTATA 57.577 34.615 10.38 0.00 0.00 1.47
159 160 8.526978 ACTGCTGTCTACATATGATTGGTATAG 58.473 37.037 10.38 0.00 0.00 1.31
160 161 8.650143 TGCTGTCTACATATGATTGGTATAGA 57.350 34.615 10.38 1.36 0.00 1.98
161 162 8.523658 TGCTGTCTACATATGATTGGTATAGAC 58.476 37.037 10.38 13.69 33.92 2.59
162 163 8.523658 GCTGTCTACATATGATTGGTATAGACA 58.476 37.037 20.30 20.30 39.00 3.41
164 165 8.523658 TGTCTACATATGATTGGTATAGACAGC 58.476 37.037 18.78 3.01 37.20 4.40
165 166 7.698550 GTCTACATATGATTGGTATAGACAGCG 59.301 40.741 10.38 0.00 33.63 5.18
166 167 6.346477 ACATATGATTGGTATAGACAGCGT 57.654 37.500 10.38 0.00 0.00 5.07
167 168 6.759272 ACATATGATTGGTATAGACAGCGTT 58.241 36.000 10.38 0.00 0.00 4.84
168 169 6.646653 ACATATGATTGGTATAGACAGCGTTG 59.353 38.462 10.38 0.00 0.00 4.10
169 170 4.465632 TGATTGGTATAGACAGCGTTGT 57.534 40.909 3.93 3.93 41.18 3.32
183 184 6.701432 ACAGCGTTGTCTAAACTAATGTAC 57.299 37.500 0.00 0.00 29.46 2.90
184 185 6.218019 ACAGCGTTGTCTAAACTAATGTACA 58.782 36.000 0.00 0.00 29.46 2.90
185 186 6.872020 ACAGCGTTGTCTAAACTAATGTACAT 59.128 34.615 1.41 1.41 29.46 2.29
186 187 7.148639 ACAGCGTTGTCTAAACTAATGTACATG 60.149 37.037 9.63 0.00 29.46 3.21
187 188 5.957796 GCGTTGTCTAAACTAATGTACATGC 59.042 40.000 9.63 0.00 0.00 4.06
188 189 6.475207 CGTTGTCTAAACTAATGTACATGCC 58.525 40.000 9.63 0.00 0.00 4.40
189 190 6.456449 CGTTGTCTAAACTAATGTACATGCCC 60.456 42.308 9.63 0.00 0.00 5.36
206 207 2.210961 GCCCTTAGATAGCCGTGTTTC 58.789 52.381 0.00 0.00 0.00 2.78
230 231 0.260230 TTGTCCCTTTGGTGCAGGAA 59.740 50.000 0.00 0.00 32.41 3.36
254 255 9.236006 GAAATAGCAGATATCCCAATACACAAT 57.764 33.333 0.00 0.00 0.00 2.71
302 303 2.212900 CTGTCGCCAGTCGTCCATGA 62.213 60.000 0.00 0.00 39.67 3.07
314 318 4.960469 AGTCGTCCATGATTTTCTACCCTA 59.040 41.667 0.00 0.00 0.00 3.53
328 332 4.999751 CTACCCTACGTAGAATCGGTAC 57.000 50.000 24.15 0.00 46.53 3.34
329 333 3.281727 ACCCTACGTAGAATCGGTACA 57.718 47.619 24.15 0.00 34.94 2.90
330 334 2.945668 ACCCTACGTAGAATCGGTACAC 59.054 50.000 24.15 0.00 34.94 2.90
331 335 2.945008 CCCTACGTAGAATCGGTACACA 59.055 50.000 24.15 0.00 34.94 3.72
332 336 3.242870 CCCTACGTAGAATCGGTACACAC 60.243 52.174 24.15 0.00 34.94 3.82
412 419 3.175929 CCCGCGACATTTTAAAATCCAC 58.824 45.455 8.23 4.84 0.00 4.02
416 423 3.672241 GCGACATTTTAAAATCCACGCCT 60.672 43.478 26.99 3.60 36.35 5.52
510 517 6.451960 GCCGAATTTAAAACACGCATTTACTC 60.452 38.462 0.00 0.00 0.00 2.59
571 583 3.775654 CCTCACCCCCTCGCTGAC 61.776 72.222 0.00 0.00 0.00 3.51
572 584 2.997315 CTCACCCCCTCGCTGACA 60.997 66.667 0.00 0.00 0.00 3.58
616 629 3.625897 CCGACAGCCACACCCAGA 61.626 66.667 0.00 0.00 0.00 3.86
826 860 3.341469 ATCCAGGGGCGGAAGGGTA 62.341 63.158 0.00 0.00 38.95 3.69
1134 1168 1.451387 GTACAAGGCCATGTCCCCG 60.451 63.158 18.52 0.00 34.75 5.73
1206 1240 4.924187 CCCTCCGCCCTCCTCGAT 62.924 72.222 0.00 0.00 0.00 3.59
1368 1416 0.104855 TTCCGATGCGCATTAGCTCT 59.895 50.000 26.12 0.00 39.10 4.09
1396 1444 3.389687 AGTTTATGAGACAATTGCGCG 57.610 42.857 5.05 0.00 0.00 6.86
1434 1486 1.278238 CTCGGAATAACGCGCTTTCT 58.722 50.000 5.73 0.00 0.00 2.52
1493 1545 2.104111 TCTGGAACTTCCTTTTCTGCGA 59.896 45.455 9.31 0.00 37.46 5.10
1511 1563 2.481449 GCGAGGGTTCTTCGTGATATGT 60.481 50.000 1.78 0.00 0.00 2.29
1531 1583 3.110358 GTTTTGTTTTCCCTCCGTTTCG 58.890 45.455 0.00 0.00 0.00 3.46
1549 1601 1.072505 GTCTTTTGGAGCGTCCCCA 59.927 57.895 2.23 0.00 35.03 4.96
1550 1602 0.322546 GTCTTTTGGAGCGTCCCCAT 60.323 55.000 2.23 0.00 35.03 4.00
1681 1733 1.076513 ACATTCCTTTTACGGGGGCTT 59.923 47.619 0.00 0.00 0.00 4.35
1682 1734 1.749063 CATTCCTTTTACGGGGGCTTC 59.251 52.381 0.00 0.00 0.00 3.86
1712 1764 4.993905 CTTATTTAAGGAAACGCCCCTTG 58.006 43.478 12.22 0.00 43.39 3.61
1748 1800 2.403252 ATACTGGTGGTGTGCTAAGC 57.597 50.000 0.00 0.00 0.00 3.09
1749 1801 1.348064 TACTGGTGGTGTGCTAAGCT 58.652 50.000 0.00 0.00 0.00 3.74
1756 1808 1.628340 TGGTGTGCTAAGCTATGGTGT 59.372 47.619 0.00 0.00 0.00 4.16
1761 1813 2.603560 GTGCTAAGCTATGGTGTTCGTC 59.396 50.000 0.00 0.00 0.00 4.20
1764 1816 2.386661 AAGCTATGGTGTTCGTCCAG 57.613 50.000 0.00 0.00 38.42 3.86
1840 1892 1.737793 CGGGATTGGTTGTAGAAGTGC 59.262 52.381 0.00 0.00 0.00 4.40
1910 1962 1.303561 TTGCTTGCTGGGCCTAGTG 60.304 57.895 18.47 9.47 0.00 2.74
1911 1963 3.136791 GCTTGCTGGGCCTAGTGC 61.137 66.667 18.47 15.26 40.16 4.40
1921 1973 2.903404 GCCTAGTGCCCTAGTCACT 58.097 57.895 16.10 16.10 45.71 3.41
1922 1974 1.196012 GCCTAGTGCCCTAGTCACTT 58.804 55.000 16.79 5.41 41.61 3.16
1923 1975 1.134670 GCCTAGTGCCCTAGTCACTTG 60.135 57.143 16.79 14.81 41.61 3.16
2019 2075 6.376581 CCTCTTTCAAGCATAGGAGAAAATGT 59.623 38.462 0.00 0.00 30.49 2.71
2040 2096 6.473397 TGTTTGGCAAACTTGTTACTTTTG 57.527 33.333 35.03 0.00 41.90 2.44
2043 2099 6.713792 TTGGCAAACTTGTTACTTTTGAAC 57.286 33.333 0.00 0.00 32.91 3.18
2125 2182 6.012658 TGCAGGCTGTAGTAAAGAAAAATG 57.987 37.500 17.16 0.00 0.00 2.32
2172 2229 7.116736 TCAGAGGGCGATGTACTTCATATATA 58.883 38.462 9.22 0.00 36.83 0.86
2260 2322 4.945246 AGCGTGGTAGACATCGAAAATAT 58.055 39.130 0.00 0.00 0.00 1.28
2868 2932 4.698780 GTTTGGGGAGAAACTATGGTACAC 59.301 45.833 0.00 0.00 35.36 2.90
3673 3738 1.388547 TTTACGATCCCATTGCTGCC 58.611 50.000 0.00 0.00 0.00 4.85
3800 3865 7.826690 TCCCTTAAAGTTACAATGCTCAAATC 58.173 34.615 0.00 0.00 0.00 2.17
4239 4307 5.932303 TCAAGTGCTAATCTTGTCTACAACC 59.068 40.000 5.74 0.00 41.78 3.77
4329 4397 2.604174 GCCCCGTGTTGTCGTTCAG 61.604 63.158 0.00 0.00 0.00 3.02
4597 4666 4.632688 CAGTCATGAGTCATGCATGTGTTA 59.367 41.667 25.53 11.56 42.77 2.41
4736 4806 6.228258 TGAACAAGTATTCTACTTCACACCC 58.772 40.000 0.00 0.00 45.38 4.61
5138 5209 8.523915 AAGATCACATTTAAAGGCACATATGA 57.476 30.769 10.38 0.00 0.00 2.15
5206 5277 9.379811 CATATAATGCAAAAACAAAAACACACC 57.620 29.630 0.00 0.00 0.00 4.16
5433 5515 5.499004 TCCCTAAGCATACAAAGTGAAGT 57.501 39.130 0.00 0.00 0.00 3.01
5498 5584 0.578683 CGAAGTCCATATGTGCAGCG 59.421 55.000 1.24 0.00 0.00 5.18
5659 5745 9.463443 GTAAGAATTGCTAGTGTTGAAAATGTT 57.537 29.630 0.00 0.00 0.00 2.71
5699 5785 2.884639 TGCTGCCTAAGTTTTGACTTCC 59.115 45.455 0.00 0.00 0.00 3.46
5750 5836 2.029110 CACGGGCATGACCAGAATTTTT 60.029 45.455 20.22 0.00 42.05 1.94
5848 5934 2.068834 TTCACTACTCCCTCCGATCC 57.931 55.000 0.00 0.00 0.00 3.36
5992 6078 1.032014 ACCGTGCCATATGAAATGCC 58.968 50.000 3.65 0.00 0.00 4.40
6206 6292 3.553511 CAGTTTACATGTCAGATCGGAGC 59.446 47.826 0.00 0.00 0.00 4.70
6295 6381 9.593134 AACTTTTGCACTAATTGACAAACAATA 57.407 25.926 0.00 0.00 46.90 1.90
6438 6524 1.493022 GGTACCCATAATGCAGGTCCA 59.507 52.381 0.00 0.00 35.02 4.02
6486 6572 5.813672 ACATACTTGATCAAATGCAAATGGC 59.186 36.000 16.61 0.00 45.13 4.40
6638 6927 5.964958 AACAATTGGAGTTAGTGGTGATG 57.035 39.130 10.83 0.00 0.00 3.07
6790 7082 2.740981 CTCAGTCAAACTAGCAAGCCAG 59.259 50.000 0.00 0.00 0.00 4.85
6837 7130 5.997385 AGAAAATACTTTACAAGTGCACGG 58.003 37.500 12.01 10.63 42.84 4.94
7024 7317 6.434652 GCTACTAATCTAATACTCCCTCTGCA 59.565 42.308 0.00 0.00 0.00 4.41
7137 7430 9.145865 GCTAGTCCTCTATAACAAATAAGATGC 57.854 37.037 0.00 0.00 0.00 3.91
7339 7719 6.423182 ACCATAACATACAGCACCAAGTAAT 58.577 36.000 0.00 0.00 0.00 1.89
7340 7720 7.570132 ACCATAACATACAGCACCAAGTAATA 58.430 34.615 0.00 0.00 0.00 0.98
7341 7721 8.050325 ACCATAACATACAGCACCAAGTAATAA 58.950 33.333 0.00 0.00 0.00 1.40
7342 7722 9.066892 CCATAACATACAGCACCAAGTAATAAT 57.933 33.333 0.00 0.00 0.00 1.28
7343 7723 9.882996 CATAACATACAGCACCAAGTAATAATG 57.117 33.333 0.00 0.00 0.00 1.90
7344 7724 6.942532 ACATACAGCACCAAGTAATAATGG 57.057 37.500 0.00 0.00 42.60 3.16
7345 7725 6.658849 ACATACAGCACCAAGTAATAATGGA 58.341 36.000 0.00 0.00 39.12 3.41
7346 7726 6.542370 ACATACAGCACCAAGTAATAATGGAC 59.458 38.462 0.00 0.00 39.12 4.02
7347 7727 4.917385 ACAGCACCAAGTAATAATGGACA 58.083 39.130 0.00 0.00 39.12 4.02
7348 7728 5.321102 ACAGCACCAAGTAATAATGGACAA 58.679 37.500 0.00 0.00 39.12 3.18
7349 7729 5.951747 ACAGCACCAAGTAATAATGGACAAT 59.048 36.000 0.00 0.00 39.12 2.71
7350 7730 7.116075 ACAGCACCAAGTAATAATGGACAATA 58.884 34.615 0.00 0.00 39.12 1.90
7351 7731 7.613801 ACAGCACCAAGTAATAATGGACAATAA 59.386 33.333 0.00 0.00 39.12 1.40
7352 7732 7.915397 CAGCACCAAGTAATAATGGACAATAAC 59.085 37.037 0.00 0.00 39.12 1.89
7353 7733 7.613801 AGCACCAAGTAATAATGGACAATAACA 59.386 33.333 0.00 0.00 39.12 2.41
7354 7734 8.413229 GCACCAAGTAATAATGGACAATAACAT 58.587 33.333 0.00 0.00 39.12 2.71
7363 7743 9.639563 AATAATGGACAATAACATACATCACCA 57.360 29.630 0.00 0.00 0.00 4.17
7364 7744 7.953005 AATGGACAATAACATACATCACCAA 57.047 32.000 0.00 0.00 0.00 3.67
7365 7745 7.572523 ATGGACAATAACATACATCACCAAG 57.427 36.000 0.00 0.00 0.00 3.61
7373 7783 9.905713 AATAACATACATCACCAAGTAATGAGT 57.094 29.630 0.00 0.00 0.00 3.41
7386 7796 5.349061 AGTAATGAGTCACATGAGCATGA 57.651 39.130 16.70 0.00 41.20 3.07
7443 7853 6.096846 GGCTTTTAAGGGCTTGATTGATTCTA 59.903 38.462 0.00 0.00 0.00 2.10
7483 7893 0.036022 TCAACCACATGGATCGCACA 59.964 50.000 4.53 0.00 38.94 4.57
7528 7938 6.449635 TTGTGAATGGATTTGTATGTAGCC 57.550 37.500 0.00 0.00 0.00 3.93
7577 7999 9.135189 TGAGCCATTGCACTCTTATATATTTTT 57.865 29.630 3.97 0.00 41.13 1.94
7656 8078 1.326852 CATGTTGAGAGAGCATCGCAC 59.673 52.381 0.00 0.00 42.67 5.34
7781 8203 2.931969 TCGTGCATCAGATTAACAGCAG 59.068 45.455 0.00 0.00 32.03 4.24
7914 8336 3.706373 AGCCCGAACCACAGCGAT 61.706 61.111 0.00 0.00 0.00 4.58
7959 8381 2.697751 AGGTCCTGATCAGATGCAGTAC 59.302 50.000 24.62 9.45 0.00 2.73
8124 8546 2.439507 ACCGATGGACCATTCAGCTAAT 59.560 45.455 8.78 0.00 0.00 1.73
8294 8717 2.805295 CGGTTACAAGTCAGTTCAGCCA 60.805 50.000 0.00 0.00 0.00 4.75
8356 8779 4.433283 GCAAATGCGCATGTGTCTTTTTAG 60.433 41.667 34.71 12.52 0.00 1.85
8358 8781 1.068610 TGCGCATGTGTCTTTTTAGGC 60.069 47.619 5.66 0.00 0.00 3.93
8393 8817 0.528466 GCTGTATGTAGCGCTGCAGA 60.528 55.000 31.14 25.54 33.46 4.26
8535 8961 8.628882 AATTTTCTTTTCCTGTTAAGACAACG 57.371 30.769 0.00 0.00 34.85 4.10
8587 9013 4.803088 GCTTAGTCTCTGTGCTTACATCTG 59.197 45.833 0.00 0.00 0.00 2.90
8589 9015 6.682611 GCTTAGTCTCTGTGCTTACATCTGAT 60.683 42.308 0.00 0.00 0.00 2.90
8619 9051 4.846779 TGATTGGGTTTACTTTGTGCTC 57.153 40.909 0.00 0.00 0.00 4.26
8620 9052 4.211125 TGATTGGGTTTACTTTGTGCTCA 58.789 39.130 0.00 0.00 0.00 4.26
8621 9053 4.037446 TGATTGGGTTTACTTTGTGCTCAC 59.963 41.667 0.00 0.00 0.00 3.51
8643 9085 4.079385 ACTTCCAACCCTACTCCAAAAAGT 60.079 41.667 0.00 0.00 0.00 2.66
8655 9097 2.762887 TCCAAAAAGTGCATGGACAACA 59.237 40.909 20.21 0.00 38.30 3.33
8657 9099 3.937706 CCAAAAAGTGCATGGACAACAAA 59.062 39.130 20.21 0.00 36.27 2.83
8667 9109 3.077229 TGGACAACAAAAAGTGCATCG 57.923 42.857 0.00 0.00 30.92 3.84
8713 9155 4.882671 CGGAGGGTCATGTTAAATTGAG 57.117 45.455 0.00 0.00 0.00 3.02
8719 9161 7.556275 GGAGGGTCATGTTAAATTGAGTATTGA 59.444 37.037 0.00 0.00 0.00 2.57
8727 9169 3.976793 AATTGAGTATTGATGCTGCCG 57.023 42.857 0.00 0.00 0.00 5.69
8771 9213 2.886862 CTACTGGAGCAGTGATCAGG 57.113 55.000 11.09 4.60 45.01 3.86
8772 9214 1.411977 CTACTGGAGCAGTGATCAGGG 59.588 57.143 11.09 2.08 45.01 4.45
8773 9215 1.153208 CTGGAGCAGTGATCAGGGC 60.153 63.158 11.09 9.90 0.00 5.19
8774 9216 2.191641 GGAGCAGTGATCAGGGCC 59.808 66.667 11.09 0.00 0.00 5.80
8775 9217 2.202987 GAGCAGTGATCAGGGCCG 60.203 66.667 13.40 0.00 0.00 6.13
8776 9218 3.746949 GAGCAGTGATCAGGGCCGG 62.747 68.421 13.40 0.00 0.00 6.13
8778 9220 4.864334 CAGTGATCAGGGCCGGCC 62.864 72.222 38.57 38.57 0.00 6.13
8841 9283 3.674278 GGGGGCCCATGATGTAGT 58.326 61.111 26.86 0.00 35.81 2.73
8842 9284 2.862780 GGGGGCCCATGATGTAGTA 58.137 57.895 26.86 0.00 35.81 1.82
8843 9285 1.372501 GGGGGCCCATGATGTAGTAT 58.627 55.000 26.86 0.00 35.81 2.12
8844 9286 2.557869 GGGGGCCCATGATGTAGTATA 58.442 52.381 26.86 0.00 35.81 1.47
8845 9287 3.123273 GGGGGCCCATGATGTAGTATAT 58.877 50.000 26.86 0.00 35.81 0.86
8846 9288 4.303794 GGGGGCCCATGATGTAGTATATA 58.696 47.826 26.86 0.00 35.81 0.86
8847 9289 4.913968 GGGGGCCCATGATGTAGTATATAT 59.086 45.833 26.86 0.00 35.81 0.86
8848 9290 6.088819 GGGGGCCCATGATGTAGTATATATA 58.911 44.000 26.86 0.00 35.81 0.86
8849 9291 6.013639 GGGGGCCCATGATGTAGTATATATAC 60.014 46.154 26.86 14.05 35.81 1.47
8850 9292 6.557253 GGGGCCCATGATGTAGTATATATACA 59.443 42.308 26.86 7.37 37.53 2.29
8851 9293 7.237679 GGGGCCCATGATGTAGTATATATACAT 59.762 40.741 26.86 11.57 44.52 2.29
8852 9294 9.321532 GGGCCCATGATGTAGTATATATACATA 57.678 37.037 19.95 10.50 42.48 2.29
8865 9307 9.434275 AGTATATATACATACTAATGCCCAGCA 57.566 33.333 22.00 0.00 40.16 4.41
8868 9310 9.973661 ATATATACATACTAATGCCCAGCAAAA 57.026 29.630 0.00 0.00 43.62 2.44
8869 9311 8.704849 ATATACATACTAATGCCCAGCAAAAA 57.295 30.769 0.00 0.00 43.62 1.94
8896 9338 2.420058 AAAAACGAGATGGGCTAGGG 57.580 50.000 0.00 0.00 0.00 3.53
8897 9339 1.286248 AAAACGAGATGGGCTAGGGT 58.714 50.000 0.00 0.00 0.00 4.34
8898 9340 0.541863 AAACGAGATGGGCTAGGGTG 59.458 55.000 0.00 0.00 0.00 4.61
8899 9341 0.617820 AACGAGATGGGCTAGGGTGT 60.618 55.000 0.00 0.00 0.00 4.16
8900 9342 1.330655 ACGAGATGGGCTAGGGTGTG 61.331 60.000 0.00 0.00 0.00 3.82
8901 9343 1.043116 CGAGATGGGCTAGGGTGTGA 61.043 60.000 0.00 0.00 0.00 3.58
8902 9344 0.755686 GAGATGGGCTAGGGTGTGAG 59.244 60.000 0.00 0.00 0.00 3.51
8903 9345 0.692419 AGATGGGCTAGGGTGTGAGG 60.692 60.000 0.00 0.00 0.00 3.86
8904 9346 2.330924 GATGGGCTAGGGTGTGAGGC 62.331 65.000 0.00 0.00 37.52 4.70
8906 9348 3.798511 GGCTAGGGTGTGAGGCCC 61.799 72.222 0.00 0.00 46.43 5.80
8912 9354 4.408821 GGTGTGAGGCCCATGCGA 62.409 66.667 0.00 0.00 38.85 5.10
8913 9355 2.124570 GTGTGAGGCCCATGCGAT 60.125 61.111 0.00 0.00 38.85 4.58
8914 9356 2.182842 GTGTGAGGCCCATGCGATC 61.183 63.158 0.00 0.00 38.85 3.69
8915 9357 2.190313 GTGAGGCCCATGCGATCA 59.810 61.111 0.00 0.00 38.85 2.92
8916 9358 1.890979 GTGAGGCCCATGCGATCAG 60.891 63.158 0.00 0.00 35.37 2.90
8917 9359 2.369633 TGAGGCCCATGCGATCAGT 61.370 57.895 0.00 0.00 38.85 3.41
8918 9360 1.153086 GAGGCCCATGCGATCAGTT 60.153 57.895 0.00 0.00 38.85 3.16
8919 9361 0.106708 GAGGCCCATGCGATCAGTTA 59.893 55.000 0.00 0.00 38.85 2.24
8920 9362 0.179045 AGGCCCATGCGATCAGTTAC 60.179 55.000 0.00 0.00 38.85 2.50
8921 9363 1.498865 GGCCCATGCGATCAGTTACG 61.499 60.000 0.00 0.00 38.85 3.18
8922 9364 0.529773 GCCCATGCGATCAGTTACGA 60.530 55.000 0.00 0.00 0.00 3.43
8923 9365 1.934589 CCCATGCGATCAGTTACGAA 58.065 50.000 0.00 0.00 0.00 3.85
8924 9366 1.860950 CCCATGCGATCAGTTACGAAG 59.139 52.381 0.00 0.00 0.00 3.79
8925 9367 1.258982 CCATGCGATCAGTTACGAAGC 59.741 52.381 0.00 0.00 0.00 3.86
8926 9368 1.071894 CATGCGATCAGTTACGAAGCG 60.072 52.381 0.00 0.00 0.00 4.68
8927 9369 0.109458 TGCGATCAGTTACGAAGCGT 60.109 50.000 0.00 0.00 44.35 5.07
8928 9370 0.989890 GCGATCAGTTACGAAGCGTT 59.010 50.000 0.00 0.00 41.54 4.84
8929 9371 2.179589 GCGATCAGTTACGAAGCGTTA 58.820 47.619 0.00 0.00 41.54 3.18
8930 9372 2.035921 GCGATCAGTTACGAAGCGTTAC 60.036 50.000 0.00 0.00 41.54 2.50
8931 9373 2.210485 CGATCAGTTACGAAGCGTTACG 59.790 50.000 0.00 0.00 42.81 3.18
8962 9404 4.331622 TCGGTACCGACTGCTCAT 57.668 55.556 32.61 0.00 44.01 2.90
8963 9405 2.575108 TCGGTACCGACTGCTCATT 58.425 52.632 32.61 0.00 44.01 2.57
8964 9406 0.892755 TCGGTACCGACTGCTCATTT 59.107 50.000 32.61 0.00 44.01 2.32
8965 9407 1.274167 TCGGTACCGACTGCTCATTTT 59.726 47.619 32.61 0.00 44.01 1.82
8966 9408 1.659098 CGGTACCGACTGCTCATTTTC 59.341 52.381 30.64 0.00 42.83 2.29
8967 9409 2.674177 CGGTACCGACTGCTCATTTTCT 60.674 50.000 30.64 0.00 42.83 2.52
8968 9410 3.335579 GGTACCGACTGCTCATTTTCTT 58.664 45.455 0.00 0.00 0.00 2.52
8969 9411 3.751698 GGTACCGACTGCTCATTTTCTTT 59.248 43.478 0.00 0.00 0.00 2.52
8970 9412 4.215613 GGTACCGACTGCTCATTTTCTTTT 59.784 41.667 0.00 0.00 0.00 2.27
8971 9413 4.489679 ACCGACTGCTCATTTTCTTTTC 57.510 40.909 0.00 0.00 0.00 2.29
8972 9414 3.253432 ACCGACTGCTCATTTTCTTTTCC 59.747 43.478 0.00 0.00 0.00 3.13
8973 9415 3.503748 CCGACTGCTCATTTTCTTTTCCT 59.496 43.478 0.00 0.00 0.00 3.36
8974 9416 4.022849 CCGACTGCTCATTTTCTTTTCCTT 60.023 41.667 0.00 0.00 0.00 3.36
8975 9417 5.149977 CGACTGCTCATTTTCTTTTCCTTC 58.850 41.667 0.00 0.00 0.00 3.46
8976 9418 5.113502 ACTGCTCATTTTCTTTTCCTTCG 57.886 39.130 0.00 0.00 0.00 3.79
8977 9419 4.580580 ACTGCTCATTTTCTTTTCCTTCGT 59.419 37.500 0.00 0.00 0.00 3.85
8978 9420 5.108385 TGCTCATTTTCTTTTCCTTCGTC 57.892 39.130 0.00 0.00 0.00 4.20
8979 9421 4.821805 TGCTCATTTTCTTTTCCTTCGTCT 59.178 37.500 0.00 0.00 0.00 4.18
8980 9422 5.149977 GCTCATTTTCTTTTCCTTCGTCTG 58.850 41.667 0.00 0.00 0.00 3.51
8981 9423 5.689383 TCATTTTCTTTTCCTTCGTCTGG 57.311 39.130 0.00 0.00 0.00 3.86
8982 9424 5.373222 TCATTTTCTTTTCCTTCGTCTGGA 58.627 37.500 0.00 0.00 0.00 3.86
8983 9425 5.470098 TCATTTTCTTTTCCTTCGTCTGGAG 59.530 40.000 0.00 0.00 34.76 3.86
8984 9426 4.417426 TTTCTTTTCCTTCGTCTGGAGT 57.583 40.909 0.00 0.00 34.76 3.85
8985 9427 3.662247 TCTTTTCCTTCGTCTGGAGTC 57.338 47.619 0.00 0.00 34.76 3.36
8986 9428 3.231818 TCTTTTCCTTCGTCTGGAGTCT 58.768 45.455 0.00 0.00 34.76 3.24
8987 9429 3.005897 TCTTTTCCTTCGTCTGGAGTCTG 59.994 47.826 0.00 0.00 34.76 3.51
8988 9430 1.257743 TTCCTTCGTCTGGAGTCTGG 58.742 55.000 0.00 0.00 34.76 3.86
8989 9431 0.404426 TCCTTCGTCTGGAGTCTGGA 59.596 55.000 0.00 0.00 0.00 3.86
8990 9432 0.528470 CCTTCGTCTGGAGTCTGGAC 59.472 60.000 6.13 6.13 0.00 4.02
8991 9433 1.540267 CTTCGTCTGGAGTCTGGACT 58.460 55.000 2.62 2.62 45.84 3.85
8992 9434 1.201181 CTTCGTCTGGAGTCTGGACTG 59.799 57.143 8.06 0.00 42.66 3.51
8993 9435 0.110678 TCGTCTGGAGTCTGGACTGT 59.889 55.000 8.06 0.00 42.66 3.55
8994 9436 0.962489 CGTCTGGAGTCTGGACTGTT 59.038 55.000 8.06 0.00 42.66 3.16
8995 9437 1.336332 CGTCTGGAGTCTGGACTGTTG 60.336 57.143 8.06 0.00 42.66 3.33
8996 9438 1.001406 GTCTGGAGTCTGGACTGTTGG 59.999 57.143 8.06 0.00 42.66 3.77
8997 9439 1.051812 CTGGAGTCTGGACTGTTGGT 58.948 55.000 8.06 0.00 42.66 3.67
8998 9440 1.001406 CTGGAGTCTGGACTGTTGGTC 59.999 57.143 8.06 0.00 42.66 4.02
8999 9441 1.343069 GGAGTCTGGACTGTTGGTCT 58.657 55.000 8.06 0.00 42.66 3.85
9000 9442 1.273886 GGAGTCTGGACTGTTGGTCTC 59.726 57.143 8.06 0.00 42.66 3.36
9001 9443 2.243810 GAGTCTGGACTGTTGGTCTCT 58.756 52.381 8.06 0.00 42.66 3.10
9002 9444 3.422796 GAGTCTGGACTGTTGGTCTCTA 58.577 50.000 8.06 0.00 42.66 2.43
9003 9445 3.827302 GAGTCTGGACTGTTGGTCTCTAA 59.173 47.826 8.06 0.00 42.66 2.10
9004 9446 4.421131 AGTCTGGACTGTTGGTCTCTAAT 58.579 43.478 2.15 0.00 43.97 1.73
9005 9447 4.464597 AGTCTGGACTGTTGGTCTCTAATC 59.535 45.833 2.15 0.00 43.97 1.75
9006 9448 4.464597 GTCTGGACTGTTGGTCTCTAATCT 59.535 45.833 0.00 0.00 43.97 2.40
9007 9449 5.046950 GTCTGGACTGTTGGTCTCTAATCTT 60.047 44.000 0.00 0.00 43.97 2.40
9008 9450 5.544176 TCTGGACTGTTGGTCTCTAATCTTT 59.456 40.000 0.00 0.00 43.97 2.52
9009 9451 6.043243 TCTGGACTGTTGGTCTCTAATCTTTT 59.957 38.462 0.00 0.00 43.97 2.27
9010 9452 6.231211 TGGACTGTTGGTCTCTAATCTTTTC 58.769 40.000 0.00 0.00 43.97 2.29
9011 9453 5.348997 GGACTGTTGGTCTCTAATCTTTTCG 59.651 44.000 0.00 0.00 43.97 3.46
9012 9454 5.855045 ACTGTTGGTCTCTAATCTTTTCGT 58.145 37.500 0.00 0.00 0.00 3.85
9013 9455 5.927115 ACTGTTGGTCTCTAATCTTTTCGTC 59.073 40.000 0.00 0.00 0.00 4.20
9014 9456 5.235516 TGTTGGTCTCTAATCTTTTCGTCC 58.764 41.667 0.00 0.00 0.00 4.79
9015 9457 5.011738 TGTTGGTCTCTAATCTTTTCGTCCT 59.988 40.000 0.00 0.00 0.00 3.85
9016 9458 5.073311 TGGTCTCTAATCTTTTCGTCCTG 57.927 43.478 0.00 0.00 0.00 3.86
9017 9459 3.866327 GGTCTCTAATCTTTTCGTCCTGC 59.134 47.826 0.00 0.00 0.00 4.85
9018 9460 3.866327 GTCTCTAATCTTTTCGTCCTGCC 59.134 47.826 0.00 0.00 0.00 4.85
9019 9461 3.769844 TCTCTAATCTTTTCGTCCTGCCT 59.230 43.478 0.00 0.00 0.00 4.75
9020 9462 3.861840 TCTAATCTTTTCGTCCTGCCTG 58.138 45.455 0.00 0.00 0.00 4.85
9021 9463 1.168714 AATCTTTTCGTCCTGCCTGC 58.831 50.000 0.00 0.00 0.00 4.85
9022 9464 0.678048 ATCTTTTCGTCCTGCCTGCC 60.678 55.000 0.00 0.00 0.00 4.85
9023 9465 2.668212 TTTTCGTCCTGCCTGCCG 60.668 61.111 0.00 0.00 0.00 5.69
9094 9536 4.530857 GCCGCATAGCAGTCCGGT 62.531 66.667 0.00 0.00 42.54 5.28
9095 9537 3.125607 CCGCATAGCAGTCCGGTA 58.874 61.111 0.00 0.00 36.18 4.02
9096 9538 1.440060 CCGCATAGCAGTCCGGTAA 59.560 57.895 0.00 0.00 36.18 2.85
9097 9539 0.874607 CCGCATAGCAGTCCGGTAAC 60.875 60.000 0.00 0.00 36.18 2.50
9098 9540 0.874607 CGCATAGCAGTCCGGTAACC 60.875 60.000 0.00 0.00 0.00 2.85
9099 9541 0.532196 GCATAGCAGTCCGGTAACCC 60.532 60.000 0.00 0.00 0.00 4.11
9100 9542 0.828022 CATAGCAGTCCGGTAACCCA 59.172 55.000 0.00 0.00 0.00 4.51
9101 9543 1.208535 CATAGCAGTCCGGTAACCCAA 59.791 52.381 0.00 0.00 0.00 4.12
9102 9544 1.350071 TAGCAGTCCGGTAACCCAAA 58.650 50.000 0.00 0.00 0.00 3.28
9103 9545 0.036306 AGCAGTCCGGTAACCCAAAG 59.964 55.000 0.00 0.00 0.00 2.77
9104 9546 0.250597 GCAGTCCGGTAACCCAAAGT 60.251 55.000 0.00 0.00 0.00 2.66
9105 9547 1.804601 CAGTCCGGTAACCCAAAGTC 58.195 55.000 0.00 0.00 0.00 3.01
9106 9548 1.346722 CAGTCCGGTAACCCAAAGTCT 59.653 52.381 0.00 0.00 0.00 3.24
9107 9549 1.346722 AGTCCGGTAACCCAAAGTCTG 59.653 52.381 0.00 0.00 0.00 3.51
9108 9550 0.035739 TCCGGTAACCCAAAGTCTGC 59.964 55.000 0.00 0.00 0.00 4.26
9109 9551 0.250553 CCGGTAACCCAAAGTCTGCA 60.251 55.000 0.00 0.00 0.00 4.41
9110 9552 1.600023 CGGTAACCCAAAGTCTGCAA 58.400 50.000 0.00 0.00 0.00 4.08
9111 9553 1.265905 CGGTAACCCAAAGTCTGCAAC 59.734 52.381 0.00 0.00 0.00 4.17
9112 9554 1.265905 GGTAACCCAAAGTCTGCAACG 59.734 52.381 0.00 0.00 0.00 4.10
9113 9555 2.215196 GTAACCCAAAGTCTGCAACGA 58.785 47.619 0.00 0.00 0.00 3.85
9114 9556 1.308998 AACCCAAAGTCTGCAACGAG 58.691 50.000 0.00 0.00 0.00 4.18
9115 9557 1.166531 ACCCAAAGTCTGCAACGAGC 61.167 55.000 0.00 0.00 45.96 5.03
9116 9558 1.576421 CCAAAGTCTGCAACGAGCC 59.424 57.895 0.00 0.00 44.83 4.70
9117 9559 1.165907 CCAAAGTCTGCAACGAGCCA 61.166 55.000 0.00 0.00 44.83 4.75
9118 9560 0.662619 CAAAGTCTGCAACGAGCCAA 59.337 50.000 0.00 0.00 44.83 4.52
9119 9561 1.267806 CAAAGTCTGCAACGAGCCAAT 59.732 47.619 0.00 0.00 44.83 3.16
9120 9562 0.877071 AAGTCTGCAACGAGCCAATG 59.123 50.000 0.00 0.00 44.83 2.82
9121 9563 0.035317 AGTCTGCAACGAGCCAATGA 59.965 50.000 0.00 0.00 44.83 2.57
9122 9564 0.445436 GTCTGCAACGAGCCAATGAG 59.555 55.000 0.00 0.00 44.83 2.90
9123 9565 0.674581 TCTGCAACGAGCCAATGAGG 60.675 55.000 0.00 0.00 44.83 3.86
9124 9566 0.957395 CTGCAACGAGCCAATGAGGT 60.957 55.000 0.00 0.00 44.83 3.85
9125 9567 0.323302 TGCAACGAGCCAATGAGGTA 59.677 50.000 0.00 0.00 44.83 3.08
9126 9568 1.271108 TGCAACGAGCCAATGAGGTAA 60.271 47.619 0.00 0.00 44.83 2.85
9127 9569 2.017049 GCAACGAGCCAATGAGGTAAT 58.983 47.619 0.00 0.00 40.61 1.89
9128 9570 2.032178 GCAACGAGCCAATGAGGTAATC 59.968 50.000 0.00 0.00 40.61 1.75
9129 9571 2.614057 CAACGAGCCAATGAGGTAATCC 59.386 50.000 0.00 0.00 40.61 3.01
9130 9572 1.837439 ACGAGCCAATGAGGTAATCCA 59.163 47.619 0.00 0.00 40.61 3.41
9131 9573 2.439507 ACGAGCCAATGAGGTAATCCAT 59.560 45.455 0.00 0.00 40.61 3.41
9132 9574 2.810274 CGAGCCAATGAGGTAATCCATG 59.190 50.000 0.00 0.00 40.61 3.66
9133 9575 3.494924 CGAGCCAATGAGGTAATCCATGA 60.495 47.826 0.00 0.00 40.61 3.07
9134 9576 4.660168 GAGCCAATGAGGTAATCCATGAT 58.340 43.478 0.00 0.00 40.61 2.45
9135 9577 4.660168 AGCCAATGAGGTAATCCATGATC 58.340 43.478 0.00 0.00 40.61 2.92
9136 9578 3.760684 GCCAATGAGGTAATCCATGATCC 59.239 47.826 0.00 0.00 40.61 3.36
9137 9579 4.750717 GCCAATGAGGTAATCCATGATCCA 60.751 45.833 0.00 0.00 40.61 3.41
9138 9580 5.577100 CCAATGAGGTAATCCATGATCCAT 58.423 41.667 0.00 0.00 35.89 3.41
9139 9581 6.014647 CCAATGAGGTAATCCATGATCCATT 58.985 40.000 0.00 0.00 35.89 3.16
9140 9582 6.152323 CCAATGAGGTAATCCATGATCCATTC 59.848 42.308 0.00 0.00 35.89 2.67
9141 9583 5.246981 TGAGGTAATCCATGATCCATTCC 57.753 43.478 0.00 0.00 35.89 3.01
9142 9584 4.664536 TGAGGTAATCCATGATCCATTCCA 59.335 41.667 0.00 0.00 35.89 3.53
9143 9585 4.990526 AGGTAATCCATGATCCATTCCAC 58.009 43.478 0.00 0.00 35.89 4.02
9144 9586 4.082125 GGTAATCCATGATCCATTCCACC 58.918 47.826 0.00 0.00 0.00 4.61
9145 9587 2.986534 ATCCATGATCCATTCCACCC 57.013 50.000 0.00 0.00 0.00 4.61
9146 9588 0.473755 TCCATGATCCATTCCACCCG 59.526 55.000 0.00 0.00 0.00 5.28
9147 9589 0.183492 CCATGATCCATTCCACCCGT 59.817 55.000 0.00 0.00 0.00 5.28
9148 9590 1.597742 CATGATCCATTCCACCCGTC 58.402 55.000 0.00 0.00 0.00 4.79
9149 9591 1.134128 CATGATCCATTCCACCCGTCA 60.134 52.381 0.00 0.00 0.00 4.35
9150 9592 0.541392 TGATCCATTCCACCCGTCAG 59.459 55.000 0.00 0.00 0.00 3.51
9151 9593 0.541863 GATCCATTCCACCCGTCAGT 59.458 55.000 0.00 0.00 0.00 3.41
9152 9594 0.991920 ATCCATTCCACCCGTCAGTT 59.008 50.000 0.00 0.00 0.00 3.16
9153 9595 0.768622 TCCATTCCACCCGTCAGTTT 59.231 50.000 0.00 0.00 0.00 2.66
9154 9596 1.144093 TCCATTCCACCCGTCAGTTTT 59.856 47.619 0.00 0.00 0.00 2.43
9155 9597 1.960689 CCATTCCACCCGTCAGTTTTT 59.039 47.619 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 3.286751 TTTGGCGTGGCACTCAGC 61.287 61.111 16.72 11.66 44.65 4.26
11 12 2.639286 GTTTGGCGTGGCACTCAG 59.361 61.111 16.72 0.93 0.00 3.35
12 13 2.904866 GGTTTGGCGTGGCACTCA 60.905 61.111 16.72 11.02 0.00 3.41
13 14 4.025401 CGGTTTGGCGTGGCACTC 62.025 66.667 16.72 7.71 0.00 3.51
18 19 4.025401 GACAGCGGTTTGGCGTGG 62.025 66.667 0.00 0.00 38.18 4.94
19 20 4.025401 GGACAGCGGTTTGGCGTG 62.025 66.667 0.00 0.00 38.18 5.34
33 34 6.906157 ATATTCCATCATGAAACATGGGAC 57.094 37.500 12.15 0.00 40.21 4.46
34 35 8.447200 TCTTATATTCCATCATGAAACATGGGA 58.553 33.333 12.15 5.01 40.21 4.37
35 36 8.640063 TCTTATATTCCATCATGAAACATGGG 57.360 34.615 12.15 6.36 40.21 4.00
62 63 9.783256 CCCGTAAAATTAGGAACAGAAAAATAG 57.217 33.333 0.00 0.00 0.00 1.73
63 64 9.517868 TCCCGTAAAATTAGGAACAGAAAAATA 57.482 29.630 0.00 0.00 0.00 1.40
64 65 8.411991 TCCCGTAAAATTAGGAACAGAAAAAT 57.588 30.769 0.00 0.00 0.00 1.82
65 66 7.522562 GCTCCCGTAAAATTAGGAACAGAAAAA 60.523 37.037 0.00 0.00 0.00 1.94
66 67 6.072342 GCTCCCGTAAAATTAGGAACAGAAAA 60.072 38.462 0.00 0.00 0.00 2.29
67 68 5.413523 GCTCCCGTAAAATTAGGAACAGAAA 59.586 40.000 0.00 0.00 0.00 2.52
68 69 4.939439 GCTCCCGTAAAATTAGGAACAGAA 59.061 41.667 0.00 0.00 0.00 3.02
69 70 4.020039 TGCTCCCGTAAAATTAGGAACAGA 60.020 41.667 0.00 0.00 0.00 3.41
70 71 4.258543 TGCTCCCGTAAAATTAGGAACAG 58.741 43.478 0.00 0.00 0.00 3.16
71 72 4.289238 TGCTCCCGTAAAATTAGGAACA 57.711 40.909 0.00 0.00 0.00 3.18
72 73 4.456566 TGTTGCTCCCGTAAAATTAGGAAC 59.543 41.667 0.00 0.00 38.52 3.62
73 74 4.653868 TGTTGCTCCCGTAAAATTAGGAA 58.346 39.130 0.00 0.00 0.00 3.36
74 75 4.020039 TCTGTTGCTCCCGTAAAATTAGGA 60.020 41.667 0.00 0.00 0.00 2.94
75 76 4.094442 GTCTGTTGCTCCCGTAAAATTAGG 59.906 45.833 0.00 0.00 0.00 2.69
76 77 4.201685 CGTCTGTTGCTCCCGTAAAATTAG 60.202 45.833 0.00 0.00 0.00 1.73
77 78 3.680937 CGTCTGTTGCTCCCGTAAAATTA 59.319 43.478 0.00 0.00 0.00 1.40
78 79 2.482721 CGTCTGTTGCTCCCGTAAAATT 59.517 45.455 0.00 0.00 0.00 1.82
79 80 2.073816 CGTCTGTTGCTCCCGTAAAAT 58.926 47.619 0.00 0.00 0.00 1.82
80 81 1.202557 ACGTCTGTTGCTCCCGTAAAA 60.203 47.619 0.00 0.00 0.00 1.52
81 82 0.390124 ACGTCTGTTGCTCCCGTAAA 59.610 50.000 0.00 0.00 0.00 2.01
82 83 1.246649 TACGTCTGTTGCTCCCGTAA 58.753 50.000 0.00 0.00 31.77 3.18
83 84 1.246649 TTACGTCTGTTGCTCCCGTA 58.753 50.000 0.00 0.00 33.32 4.02
84 85 0.390124 TTTACGTCTGTTGCTCCCGT 59.610 50.000 0.00 0.00 35.68 5.28
85 86 1.504359 TTTTACGTCTGTTGCTCCCG 58.496 50.000 0.00 0.00 0.00 5.14
86 87 3.621715 CCTATTTTACGTCTGTTGCTCCC 59.378 47.826 0.00 0.00 0.00 4.30
87 88 4.501071 TCCTATTTTACGTCTGTTGCTCC 58.499 43.478 0.00 0.00 0.00 4.70
88 89 5.638234 ACTTCCTATTTTACGTCTGTTGCTC 59.362 40.000 0.00 0.00 0.00 4.26
89 90 5.548406 ACTTCCTATTTTACGTCTGTTGCT 58.452 37.500 0.00 0.00 0.00 3.91
90 91 5.638234 AGACTTCCTATTTTACGTCTGTTGC 59.362 40.000 0.00 0.00 31.19 4.17
91 92 7.050281 CAGACTTCCTATTTTACGTCTGTTG 57.950 40.000 0.00 0.00 41.88 3.33
95 96 6.756221 ACAACAGACTTCCTATTTTACGTCT 58.244 36.000 0.00 0.00 32.42 4.18
96 97 7.596248 TGTACAACAGACTTCCTATTTTACGTC 59.404 37.037 0.00 0.00 0.00 4.34
97 98 7.436118 TGTACAACAGACTTCCTATTTTACGT 58.564 34.615 0.00 0.00 0.00 3.57
98 99 7.878477 TGTACAACAGACTTCCTATTTTACG 57.122 36.000 0.00 0.00 0.00 3.18
113 114 4.750098 CAGTAAAGACACCCTGTACAACAG 59.250 45.833 0.00 0.00 45.53 3.16
114 115 4.699637 CAGTAAAGACACCCTGTACAACA 58.300 43.478 0.00 0.00 37.93 3.33
115 116 3.497262 GCAGTAAAGACACCCTGTACAAC 59.503 47.826 0.00 0.00 37.93 3.32
116 117 3.389983 AGCAGTAAAGACACCCTGTACAA 59.610 43.478 0.00 0.00 37.93 2.41
117 118 2.969950 AGCAGTAAAGACACCCTGTACA 59.030 45.455 0.00 0.00 37.93 2.90
118 119 3.244112 ACAGCAGTAAAGACACCCTGTAC 60.244 47.826 0.00 0.00 36.11 2.90
119 120 2.969950 ACAGCAGTAAAGACACCCTGTA 59.030 45.455 0.00 0.00 32.26 2.74
120 121 1.768870 ACAGCAGTAAAGACACCCTGT 59.231 47.619 0.00 0.00 0.00 4.00
121 122 2.037772 AGACAGCAGTAAAGACACCCTG 59.962 50.000 0.00 0.00 0.00 4.45
122 123 2.330216 AGACAGCAGTAAAGACACCCT 58.670 47.619 0.00 0.00 0.00 4.34
123 124 2.841442 AGACAGCAGTAAAGACACCC 57.159 50.000 0.00 0.00 0.00 4.61
124 125 4.252971 TGTAGACAGCAGTAAAGACACC 57.747 45.455 0.00 0.00 0.00 4.16
125 126 7.258441 TCATATGTAGACAGCAGTAAAGACAC 58.742 38.462 1.90 0.00 0.00 3.67
126 127 7.404671 TCATATGTAGACAGCAGTAAAGACA 57.595 36.000 1.90 0.00 0.00 3.41
127 128 8.759641 CAATCATATGTAGACAGCAGTAAAGAC 58.240 37.037 1.90 0.00 0.00 3.01
128 129 7.928167 CCAATCATATGTAGACAGCAGTAAAGA 59.072 37.037 1.90 0.00 0.00 2.52
129 130 7.712639 ACCAATCATATGTAGACAGCAGTAAAG 59.287 37.037 1.90 0.00 0.00 1.85
130 131 7.564793 ACCAATCATATGTAGACAGCAGTAAA 58.435 34.615 1.90 0.00 0.00 2.01
131 132 7.124573 ACCAATCATATGTAGACAGCAGTAA 57.875 36.000 1.90 0.00 0.00 2.24
132 133 6.731292 ACCAATCATATGTAGACAGCAGTA 57.269 37.500 1.90 0.00 0.00 2.74
133 134 5.620738 ACCAATCATATGTAGACAGCAGT 57.379 39.130 1.90 0.00 0.00 4.40
134 135 8.743714 TCTATACCAATCATATGTAGACAGCAG 58.256 37.037 1.90 0.00 0.00 4.24
135 136 8.523658 GTCTATACCAATCATATGTAGACAGCA 58.476 37.037 16.60 0.00 37.54 4.41
136 137 8.523658 TGTCTATACCAATCATATGTAGACAGC 58.476 37.037 18.78 3.01 40.66 4.40
138 139 8.523658 GCTGTCTATACCAATCATATGTAGACA 58.476 37.037 20.30 20.30 42.25 3.41
139 140 7.698550 CGCTGTCTATACCAATCATATGTAGAC 59.301 40.741 15.43 15.43 37.90 2.59
140 141 7.393515 ACGCTGTCTATACCAATCATATGTAGA 59.606 37.037 1.90 0.00 0.00 2.59
141 142 7.539436 ACGCTGTCTATACCAATCATATGTAG 58.461 38.462 1.90 0.00 0.00 2.74
142 143 7.462571 ACGCTGTCTATACCAATCATATGTA 57.537 36.000 1.90 0.00 0.00 2.29
143 144 6.346477 ACGCTGTCTATACCAATCATATGT 57.654 37.500 1.90 0.00 0.00 2.29
144 145 6.646653 ACAACGCTGTCTATACCAATCATATG 59.353 38.462 0.00 0.00 0.00 1.78
145 146 6.759272 ACAACGCTGTCTATACCAATCATAT 58.241 36.000 0.00 0.00 0.00 1.78
146 147 6.156748 ACAACGCTGTCTATACCAATCATA 57.843 37.500 0.00 0.00 0.00 2.15
147 148 5.023533 ACAACGCTGTCTATACCAATCAT 57.976 39.130 0.00 0.00 0.00 2.45
148 149 4.465632 ACAACGCTGTCTATACCAATCA 57.534 40.909 0.00 0.00 0.00 2.57
160 161 6.218019 TGTACATTAGTTTAGACAACGCTGT 58.782 36.000 0.00 0.00 38.98 4.40
161 162 6.699895 TGTACATTAGTTTAGACAACGCTG 57.300 37.500 0.00 0.00 0.00 5.18
162 163 6.183360 GCATGTACATTAGTTTAGACAACGCT 60.183 38.462 5.37 0.00 0.00 5.07
163 164 5.957796 GCATGTACATTAGTTTAGACAACGC 59.042 40.000 5.37 0.00 0.00 4.84
164 165 6.456449 GGGCATGTACATTAGTTTAGACAACG 60.456 42.308 5.37 0.00 0.00 4.10
165 166 6.598064 AGGGCATGTACATTAGTTTAGACAAC 59.402 38.462 5.37 0.00 0.00 3.32
166 167 6.717289 AGGGCATGTACATTAGTTTAGACAA 58.283 36.000 5.37 0.00 0.00 3.18
167 168 6.308015 AGGGCATGTACATTAGTTTAGACA 57.692 37.500 5.37 0.00 0.00 3.41
168 169 8.202137 TCTAAGGGCATGTACATTAGTTTAGAC 58.798 37.037 5.37 0.00 0.00 2.59
169 170 8.313944 TCTAAGGGCATGTACATTAGTTTAGA 57.686 34.615 5.37 13.63 0.00 2.10
172 173 7.661847 GCTATCTAAGGGCATGTACATTAGTTT 59.338 37.037 5.37 2.01 0.00 2.66
173 174 7.162082 GCTATCTAAGGGCATGTACATTAGTT 58.838 38.462 5.37 13.71 0.00 2.24
174 175 6.295916 GGCTATCTAAGGGCATGTACATTAGT 60.296 42.308 5.37 10.96 0.00 2.24
175 176 6.109359 GGCTATCTAAGGGCATGTACATTAG 58.891 44.000 5.37 13.96 0.00 1.73
176 177 5.337250 CGGCTATCTAAGGGCATGTACATTA 60.337 44.000 5.37 0.00 0.00 1.90
177 178 4.563580 CGGCTATCTAAGGGCATGTACATT 60.564 45.833 5.37 0.00 0.00 2.71
178 179 3.055819 CGGCTATCTAAGGGCATGTACAT 60.056 47.826 1.41 1.41 0.00 2.29
179 180 2.299013 CGGCTATCTAAGGGCATGTACA 59.701 50.000 0.00 0.00 0.00 2.90
180 181 2.299297 ACGGCTATCTAAGGGCATGTAC 59.701 50.000 0.00 0.00 0.00 2.90
181 182 2.299013 CACGGCTATCTAAGGGCATGTA 59.701 50.000 0.00 0.00 0.00 2.29
182 183 1.070758 CACGGCTATCTAAGGGCATGT 59.929 52.381 0.00 0.00 0.00 3.21
183 184 1.070758 ACACGGCTATCTAAGGGCATG 59.929 52.381 0.00 0.00 0.00 4.06
184 185 1.424638 ACACGGCTATCTAAGGGCAT 58.575 50.000 0.00 0.00 0.00 4.40
185 186 1.200519 AACACGGCTATCTAAGGGCA 58.799 50.000 0.00 0.00 0.00 5.36
186 187 2.158943 AGAAACACGGCTATCTAAGGGC 60.159 50.000 0.00 0.00 0.00 5.19
187 188 3.718815 GAGAAACACGGCTATCTAAGGG 58.281 50.000 0.00 0.00 0.00 3.95
188 189 3.181489 ACGAGAAACACGGCTATCTAAGG 60.181 47.826 0.00 0.00 34.93 2.69
189 190 4.030134 ACGAGAAACACGGCTATCTAAG 57.970 45.455 0.00 0.00 34.93 2.18
206 207 0.310854 GCACCAAAGGGACAAACGAG 59.689 55.000 0.00 0.00 38.05 4.18
230 231 9.017509 CAATTGTGTATTGGGATATCTGCTATT 57.982 33.333 2.05 0.00 40.00 1.73
314 318 2.816087 ACAGTGTGTACCGATTCTACGT 59.184 45.455 0.00 0.00 0.00 3.57
321 325 1.552578 TGGCTACAGTGTGTACCGAT 58.447 50.000 5.88 0.00 31.26 4.18
323 327 2.157834 TTTGGCTACAGTGTGTACCG 57.842 50.000 5.88 0.00 31.26 4.02
328 332 3.059597 CGACTCTTTTTGGCTACAGTGTG 60.060 47.826 5.88 0.00 0.00 3.82
329 333 3.131396 CGACTCTTTTTGGCTACAGTGT 58.869 45.455 0.00 0.00 0.00 3.55
330 334 3.131396 ACGACTCTTTTTGGCTACAGTG 58.869 45.455 0.00 0.00 0.00 3.66
331 335 3.470645 ACGACTCTTTTTGGCTACAGT 57.529 42.857 0.00 0.00 0.00 3.55
332 336 3.607078 GCAACGACTCTTTTTGGCTACAG 60.607 47.826 0.00 0.00 0.00 2.74
510 517 1.528824 CTGGGATACTGGTGGGCAG 59.471 63.158 0.00 0.00 0.00 4.85
616 629 1.966762 CACCGATGGGCTGCTTTTT 59.033 52.632 0.00 0.00 36.48 1.94
765 787 4.476410 TACGCACGCGAGCTCAGG 62.476 66.667 25.38 12.73 42.83 3.86
826 860 1.022903 TAATGGGGGCAGGGGAAATT 58.977 50.000 0.00 0.00 0.00 1.82
1206 1240 3.319198 GTGAGGAGCACGGGGGAA 61.319 66.667 0.00 0.00 37.83 3.97
1368 1416 4.450082 TTGTCTCATAAACTAGAGCGCA 57.550 40.909 11.47 0.00 0.00 6.09
1396 1444 2.440247 CCACGAGCCAATTCCCCC 60.440 66.667 0.00 0.00 0.00 5.40
1458 1510 0.548031 TCCAGAATCCTCATGGCACC 59.452 55.000 0.00 0.00 33.92 5.01
1459 1511 2.019984 GTTCCAGAATCCTCATGGCAC 58.980 52.381 0.00 0.00 33.92 5.01
1468 1520 4.082517 GCAGAAAAGGAAGTTCCAGAATCC 60.083 45.833 23.87 7.64 39.61 3.01
1470 1522 3.503748 CGCAGAAAAGGAAGTTCCAGAAT 59.496 43.478 23.87 6.93 39.61 2.40
1493 1545 5.313712 ACAAAACATATCACGAAGAACCCT 58.686 37.500 0.00 0.00 0.00 4.34
1511 1563 2.754002 ACGAAACGGAGGGAAAACAAAA 59.246 40.909 0.00 0.00 0.00 2.44
1531 1583 0.322546 ATGGGGACGCTCCAAAAGAC 60.323 55.000 2.50 0.00 38.64 3.01
1549 1601 0.391661 CCACAGCAAGTAGACGGCAT 60.392 55.000 0.00 0.00 0.00 4.40
1550 1602 1.005037 CCACAGCAAGTAGACGGCA 60.005 57.895 0.00 0.00 0.00 5.69
1670 1722 2.059786 CCCTACGAAGCCCCCGTAA 61.060 63.158 0.00 0.00 41.22 3.18
1725 1777 5.365605 AGCTTAGCACACCACCAGTATAATA 59.634 40.000 7.07 0.00 0.00 0.98
1726 1778 4.164221 AGCTTAGCACACCACCAGTATAAT 59.836 41.667 7.07 0.00 0.00 1.28
1748 1800 2.496070 TCCTTCTGGACGAACACCATAG 59.504 50.000 0.00 0.00 37.46 2.23
1749 1801 2.531771 TCCTTCTGGACGAACACCATA 58.468 47.619 0.00 0.00 37.46 2.74
1756 1808 2.370519 TGGTGATTTCCTTCTGGACGAA 59.629 45.455 0.00 0.00 43.06 3.85
1761 1813 6.209391 ACAATTACTTGGTGATTTCCTTCTGG 59.791 38.462 0.00 0.00 36.64 3.86
1764 1816 6.981722 ACACAATTACTTGGTGATTTCCTTC 58.018 36.000 0.00 0.00 36.64 3.46
1840 1892 6.348868 GCAAGAGGACTCAGGAAAACAAATAG 60.349 42.308 1.75 0.00 0.00 1.73
1910 1962 0.606401 TGCAAGCAAGTGACTAGGGC 60.606 55.000 0.00 0.00 0.00 5.19
1911 1963 1.446907 CTGCAAGCAAGTGACTAGGG 58.553 55.000 0.00 0.00 0.00 3.53
2019 2075 6.706270 TGTTCAAAAGTAACAAGTTTGCCAAA 59.294 30.769 0.00 0.00 34.04 3.28
2138 2195 3.316308 ACATCGCCCTCTGAAATAAATGC 59.684 43.478 0.00 0.00 0.00 3.56
2172 2229 4.766891 ACAACACTATAGCCTGCAAATTGT 59.233 37.500 0.00 0.00 0.00 2.71
2216 2273 7.033791 CGCTTTAAGACCTCTGAATACTTGTA 58.966 38.462 0.00 0.00 0.00 2.41
2551 2613 3.181434 GGCCAGATATATTTGTGGGGTCA 60.181 47.826 10.66 0.00 0.00 4.02
2759 2821 5.773575 AGACGTAATGCTACATATGGACAG 58.226 41.667 7.80 2.48 0.00 3.51
2814 2878 7.807977 TCAAAGTGCTTTCTTCAAACTCTAT 57.192 32.000 0.00 0.00 0.00 1.98
2868 2932 6.585702 GCAAGCACAGATAGATCTACTACATG 59.414 42.308 4.10 1.92 34.85 3.21
3658 3723 0.383231 GAAAGGCAGCAATGGGATCG 59.617 55.000 0.00 0.00 0.00 3.69
3791 3856 6.053632 TGGAGTGAGAATTAGATTTGAGCA 57.946 37.500 0.00 0.00 0.00 4.26
4239 4307 9.656040 TCCATTTTCCTGTTTTCATATTTGATG 57.344 29.630 0.00 0.00 0.00 3.07
4329 4397 5.140747 AGATGTCAACCTCACTTACAGTC 57.859 43.478 0.00 0.00 0.00 3.51
4457 4525 3.393089 TCTTCTCAAGAGCCAGACAAC 57.607 47.619 0.00 0.00 32.71 3.32
4519 4588 2.223144 TGTCGCAAAATACAGAGTGCAC 59.777 45.455 9.40 9.40 36.80 4.57
4580 4649 4.541973 ACTCTAACACATGCATGACTCA 57.458 40.909 32.75 13.55 0.00 3.41
4597 4666 8.425703 GCTCTCTTATGTTAGGGATAAAACTCT 58.574 37.037 0.00 0.00 0.00 3.24
4736 4806 7.015226 TCATTCATATAAAACCTTGAGCGTG 57.985 36.000 0.00 0.00 0.00 5.34
4768 4838 3.181440 ACCACATGTCTTCACCAGATGTT 60.181 43.478 0.00 0.00 32.60 2.71
4950 5020 2.478292 GGAGGGGGTAGAACTGAATGA 58.522 52.381 0.00 0.00 0.00 2.57
5194 5265 4.817318 AATGAAGTGGGTGTGTTTTTGT 57.183 36.364 0.00 0.00 0.00 2.83
5206 5277 6.499234 TGTGTCATGACATAAATGAAGTGG 57.501 37.500 30.10 0.00 43.97 4.00
5433 5515 4.343231 ACATACACCAGCCAATCAATTGA 58.657 39.130 11.26 11.26 40.14 2.57
5498 5584 3.891366 ACACCCCATGCATAAATAAGCTC 59.109 43.478 0.00 0.00 0.00 4.09
5659 5745 3.878103 AGCAAAGCAAATGCATGACAAAA 59.122 34.783 0.00 0.00 46.22 2.44
5750 5836 3.636300 AGTTTCCACTGCTAATGTTTGCA 59.364 39.130 2.21 2.21 37.37 4.08
5848 5934 0.655733 AGGCCGCGTCAATTAATTCG 59.344 50.000 4.92 1.34 0.00 3.34
5992 6078 5.060427 TCCCTTTGGTATACATGGGAATG 57.940 43.478 16.78 0.00 44.24 2.67
6051 6137 1.355720 GCATGGGTGGATATAGCCCTT 59.644 52.381 4.18 0.00 42.77 3.95
6206 6292 0.248215 GAAAGCCGATGATGCGTTGG 60.248 55.000 0.00 0.00 30.57 3.77
6438 6524 3.769300 ACAAGGTGAGCTTTTTGGAGTTT 59.231 39.130 0.00 0.00 0.00 2.66
6486 6572 1.676006 GAACAAGTGGGAGTTGTGGTG 59.324 52.381 0.00 0.00 40.60 4.17
6487 6573 1.409661 GGAACAAGTGGGAGTTGTGGT 60.410 52.381 0.00 0.00 40.60 4.16
6536 6622 3.240861 CGTGAAAGATCTACGCTTGTAGC 59.759 47.826 3.73 0.00 44.34 3.58
6617 6906 4.202567 ACCATCACCACTAACTCCAATTGT 60.203 41.667 4.43 0.00 0.00 2.71
6618 6907 4.156556 CACCATCACCACTAACTCCAATTG 59.843 45.833 0.00 0.00 0.00 2.32
6638 6927 0.250338 GTGGGAGTGAACTCACCACC 60.250 60.000 25.44 16.08 46.71 4.61
6725 7017 7.039152 TGTGGGGTCCATAATTGCATTATATTG 60.039 37.037 0.00 0.00 35.28 1.90
6780 7072 1.040893 TAGTAGGCGCTGGCTTGCTA 61.041 55.000 7.64 9.71 41.28 3.49
6837 7130 2.876550 AGTGGAAAAAGAAGTGTACGCC 59.123 45.455 1.98 0.00 0.00 5.68
7339 7719 9.119418 CTTGGTGATGTATGTTATTGTCCATTA 57.881 33.333 0.00 0.00 0.00 1.90
7340 7720 7.615365 ACTTGGTGATGTATGTTATTGTCCATT 59.385 33.333 0.00 0.00 0.00 3.16
7341 7721 7.118723 ACTTGGTGATGTATGTTATTGTCCAT 58.881 34.615 0.00 0.00 0.00 3.41
7342 7722 6.480763 ACTTGGTGATGTATGTTATTGTCCA 58.519 36.000 0.00 0.00 0.00 4.02
7343 7723 8.500753 TTACTTGGTGATGTATGTTATTGTCC 57.499 34.615 0.00 0.00 0.00 4.02
7344 7724 9.935682 CATTACTTGGTGATGTATGTTATTGTC 57.064 33.333 0.00 0.00 0.00 3.18
7345 7725 9.679661 TCATTACTTGGTGATGTATGTTATTGT 57.320 29.630 3.15 0.00 32.49 2.71
7347 7727 9.905713 ACTCATTACTTGGTGATGTATGTTATT 57.094 29.630 3.15 0.00 32.49 1.40
7348 7728 9.547753 GACTCATTACTTGGTGATGTATGTTAT 57.452 33.333 3.15 0.00 32.49 1.89
7349 7729 8.536175 TGACTCATTACTTGGTGATGTATGTTA 58.464 33.333 3.15 0.00 32.49 2.41
7350 7730 7.334421 GTGACTCATTACTTGGTGATGTATGTT 59.666 37.037 3.15 0.00 32.49 2.71
7351 7731 6.818644 GTGACTCATTACTTGGTGATGTATGT 59.181 38.462 3.15 2.18 32.49 2.29
7352 7732 6.818142 TGTGACTCATTACTTGGTGATGTATG 59.182 38.462 3.15 0.00 32.49 2.39
7353 7733 6.946340 TGTGACTCATTACTTGGTGATGTAT 58.054 36.000 3.15 0.00 32.49 2.29
7354 7734 6.353404 TGTGACTCATTACTTGGTGATGTA 57.647 37.500 3.15 0.00 32.49 2.29
7355 7735 5.227569 TGTGACTCATTACTTGGTGATGT 57.772 39.130 3.15 0.00 32.49 3.06
7356 7736 5.876460 TCATGTGACTCATTACTTGGTGATG 59.124 40.000 0.00 0.00 34.09 3.07
7357 7737 6.053632 TCATGTGACTCATTACTTGGTGAT 57.946 37.500 0.00 0.00 34.09 3.06
7358 7738 5.482006 CTCATGTGACTCATTACTTGGTGA 58.518 41.667 0.00 0.00 34.09 4.02
7359 7739 4.093998 GCTCATGTGACTCATTACTTGGTG 59.906 45.833 0.00 0.00 34.09 4.17
7360 7740 4.256920 GCTCATGTGACTCATTACTTGGT 58.743 43.478 0.00 0.00 34.09 3.67
7361 7741 4.256110 TGCTCATGTGACTCATTACTTGG 58.744 43.478 0.00 0.00 34.09 3.61
7362 7742 5.583457 TCATGCTCATGTGACTCATTACTTG 59.417 40.000 9.41 0.00 39.72 3.16
7363 7743 5.737860 TCATGCTCATGTGACTCATTACTT 58.262 37.500 9.41 0.00 39.72 2.24
7364 7744 5.349061 TCATGCTCATGTGACTCATTACT 57.651 39.130 9.41 0.00 39.72 2.24
7365 7745 6.615264 ATTCATGCTCATGTGACTCATTAC 57.385 37.500 9.41 0.00 39.72 1.89
7416 7826 4.929479 TCAATCAAGCCCTTAAAAGCCTA 58.071 39.130 0.00 0.00 0.00 3.93
7443 7853 7.492344 GGTTGACTTTTCAAAACATCAATCACT 59.508 33.333 9.25 0.00 43.52 3.41
7457 7867 3.501828 CGATCCATGTGGTTGACTTTTCA 59.498 43.478 0.00 0.00 36.34 2.69
7483 7893 5.099042 AGGTGATACAAATTTAGGTCGCT 57.901 39.130 0.00 0.00 0.00 4.93
7528 7938 7.090808 TCACATAACAAACTGAGTAGCTACTG 58.909 38.462 30.70 19.03 36.50 2.74
7577 7999 0.183492 ACTCCTGCAGCCAAGAACAA 59.817 50.000 8.66 0.00 0.00 2.83
7586 8008 3.181506 GCATTTGTAGTAACTCCTGCAGC 60.182 47.826 8.66 0.00 0.00 5.25
7656 8078 6.475727 ACGTTGTTATCACTGATTTAGGATCG 59.524 38.462 0.00 0.00 0.00 3.69
7914 8336 0.829333 ACTGCATTTGGTTTGTGGCA 59.171 45.000 0.00 0.00 0.00 4.92
7959 8381 1.340248 GAAGCCATGGATTGCATCTGG 59.660 52.381 22.29 0.00 0.00 3.86
8124 8546 1.546029 CCAGCACCGCTATAGCATAGA 59.454 52.381 23.99 0.00 42.21 1.98
8393 8817 2.229543 TCGCTGTACAACGAATGTAGGT 59.770 45.455 18.38 0.00 45.00 3.08
8520 8946 7.334921 CCATAAATAACCGTTGTCTTAACAGGA 59.665 37.037 0.00 0.00 36.57 3.86
8523 8949 8.670135 CATCCATAAATAACCGTTGTCTTAACA 58.330 33.333 0.00 0.00 0.00 2.41
8535 8961 6.563381 CGTTGTACGAGCATCCATAAATAACC 60.563 42.308 0.00 0.00 46.05 2.85
8619 9051 3.502123 TTTGGAGTAGGGTTGGAAGTG 57.498 47.619 0.00 0.00 0.00 3.16
8620 9052 4.079385 ACTTTTTGGAGTAGGGTTGGAAGT 60.079 41.667 0.00 0.00 0.00 3.01
8621 9053 4.278419 CACTTTTTGGAGTAGGGTTGGAAG 59.722 45.833 0.00 0.00 0.00 3.46
8643 9085 2.093816 TGCACTTTTTGTTGTCCATGCA 60.094 40.909 0.00 0.00 39.38 3.96
8655 9097 3.366679 CCATGCTTCTCGATGCACTTTTT 60.367 43.478 9.29 0.00 42.92 1.94
8657 9099 1.741706 CCATGCTTCTCGATGCACTTT 59.258 47.619 9.29 0.00 42.92 2.66
8667 9109 0.036388 TTCGACCACCCATGCTTCTC 60.036 55.000 0.00 0.00 0.00 2.87
8693 9135 7.556275 TCAATACTCAATTTAACATGACCCTCC 59.444 37.037 0.00 0.00 0.00 4.30
8697 9139 8.408601 AGCATCAATACTCAATTTAACATGACC 58.591 33.333 0.00 0.00 0.00 4.02
8700 9142 7.168637 GGCAGCATCAATACTCAATTTAACATG 59.831 37.037 0.00 0.00 0.00 3.21
8727 9169 1.138661 CATCTCCTCCTGAAGGCTGAC 59.861 57.143 0.00 0.00 45.78 3.51
8761 9203 4.864334 GGCCGGCCCTGATCACTG 62.864 72.222 36.64 0.00 0.00 3.66
8824 9266 1.372501 ATACTACATCATGGGCCCCC 58.627 55.000 22.27 0.00 0.00 5.40
8825 9267 6.557253 TGTATATATACTACATCATGGGCCCC 59.443 42.308 22.27 0.85 34.41 5.80
8826 9268 7.612065 TGTATATATACTACATCATGGGCCC 57.388 40.000 17.59 17.59 34.41 5.80
8839 9281 9.434275 TGCTGGGCATTAGTATGTATATATACT 57.566 33.333 21.47 21.47 39.17 2.12
8842 9284 9.973661 TTTTGCTGGGCATTAGTATGTATATAT 57.026 29.630 0.00 0.00 38.76 0.86
8843 9285 9.800572 TTTTTGCTGGGCATTAGTATGTATATA 57.199 29.630 0.00 0.00 38.76 0.86
8844 9286 8.704849 TTTTTGCTGGGCATTAGTATGTATAT 57.295 30.769 0.00 0.00 38.76 0.86
8877 9319 1.633945 ACCCTAGCCCATCTCGTTTTT 59.366 47.619 0.00 0.00 0.00 1.94
8878 9320 1.065418 CACCCTAGCCCATCTCGTTTT 60.065 52.381 0.00 0.00 0.00 2.43
8879 9321 0.541863 CACCCTAGCCCATCTCGTTT 59.458 55.000 0.00 0.00 0.00 3.60
8880 9322 0.617820 ACACCCTAGCCCATCTCGTT 60.618 55.000 0.00 0.00 0.00 3.85
8881 9323 1.001760 ACACCCTAGCCCATCTCGT 59.998 57.895 0.00 0.00 0.00 4.18
8882 9324 1.043116 TCACACCCTAGCCCATCTCG 61.043 60.000 0.00 0.00 0.00 4.04
8883 9325 0.755686 CTCACACCCTAGCCCATCTC 59.244 60.000 0.00 0.00 0.00 2.75
8884 9326 0.692419 CCTCACACCCTAGCCCATCT 60.692 60.000 0.00 0.00 0.00 2.90
8885 9327 1.832912 CCTCACACCCTAGCCCATC 59.167 63.158 0.00 0.00 0.00 3.51
8886 9328 2.378634 GCCTCACACCCTAGCCCAT 61.379 63.158 0.00 0.00 0.00 4.00
8887 9329 3.009115 GCCTCACACCCTAGCCCA 61.009 66.667 0.00 0.00 0.00 5.36
8888 9330 3.798511 GGCCTCACACCCTAGCCC 61.799 72.222 0.00 0.00 37.66 5.19
8889 9331 3.798511 GGGCCTCACACCCTAGCC 61.799 72.222 0.84 0.00 44.68 3.93
8895 9337 3.704231 ATCGCATGGGCCTCACACC 62.704 63.158 4.53 0.00 36.38 4.16
8896 9338 2.124570 ATCGCATGGGCCTCACAC 60.125 61.111 4.53 0.00 36.38 3.82
8897 9339 2.190313 GATCGCATGGGCCTCACA 59.810 61.111 4.53 0.00 36.38 3.58
8898 9340 1.890979 CTGATCGCATGGGCCTCAC 60.891 63.158 4.53 0.00 36.38 3.51
8899 9341 1.913951 AACTGATCGCATGGGCCTCA 61.914 55.000 4.53 9.38 36.38 3.86
8900 9342 0.106708 TAACTGATCGCATGGGCCTC 59.893 55.000 4.53 5.17 36.38 4.70
8901 9343 0.179045 GTAACTGATCGCATGGGCCT 60.179 55.000 4.53 0.00 36.38 5.19
8902 9344 1.498865 CGTAACTGATCGCATGGGCC 61.499 60.000 4.59 0.00 36.38 5.80
8903 9345 0.529773 TCGTAACTGATCGCATGGGC 60.530 55.000 4.59 0.00 0.00 5.36
8904 9346 1.860950 CTTCGTAACTGATCGCATGGG 59.139 52.381 2.76 2.76 0.00 4.00
8905 9347 1.258982 GCTTCGTAACTGATCGCATGG 59.741 52.381 0.00 0.00 0.00 3.66
8906 9348 1.071894 CGCTTCGTAACTGATCGCATG 60.072 52.381 0.00 0.00 0.00 4.06
8907 9349 1.200483 CGCTTCGTAACTGATCGCAT 58.800 50.000 0.00 0.00 0.00 4.73
8908 9350 0.109458 ACGCTTCGTAACTGATCGCA 60.109 50.000 0.00 0.00 38.73 5.10
8909 9351 0.989890 AACGCTTCGTAACTGATCGC 59.010 50.000 0.00 0.00 39.99 4.58
8910 9352 2.210485 CGTAACGCTTCGTAACTGATCG 59.790 50.000 0.00 0.00 39.99 3.69
8911 9353 3.795502 CGTAACGCTTCGTAACTGATC 57.204 47.619 0.00 0.00 39.99 2.92
8937 9379 3.896133 TCGGTACCGATCGCTGGC 61.896 66.667 32.61 0.00 44.01 4.85
8945 9387 0.892755 AAATGAGCAGTCGGTACCGA 59.107 50.000 32.61 32.61 46.87 4.69
8946 9388 1.659098 GAAAATGAGCAGTCGGTACCG 59.341 52.381 28.66 28.66 41.35 4.02
8947 9389 2.973945 AGAAAATGAGCAGTCGGTACC 58.026 47.619 0.16 0.16 0.00 3.34
8948 9390 5.358298 AAAAGAAAATGAGCAGTCGGTAC 57.642 39.130 0.00 0.00 0.00 3.34
8949 9391 4.454504 GGAAAAGAAAATGAGCAGTCGGTA 59.545 41.667 0.00 0.00 0.00 4.02
8950 9392 3.253432 GGAAAAGAAAATGAGCAGTCGGT 59.747 43.478 0.00 0.00 0.00 4.69
8951 9393 3.503748 AGGAAAAGAAAATGAGCAGTCGG 59.496 43.478 0.00 0.00 0.00 4.79
8952 9394 4.756084 AGGAAAAGAAAATGAGCAGTCG 57.244 40.909 0.00 0.00 0.00 4.18
8953 9395 5.149977 CGAAGGAAAAGAAAATGAGCAGTC 58.850 41.667 0.00 0.00 0.00 3.51
8954 9396 4.580580 ACGAAGGAAAAGAAAATGAGCAGT 59.419 37.500 0.00 0.00 0.00 4.40
8955 9397 5.049129 AGACGAAGGAAAAGAAAATGAGCAG 60.049 40.000 0.00 0.00 0.00 4.24
8956 9398 4.821805 AGACGAAGGAAAAGAAAATGAGCA 59.178 37.500 0.00 0.00 0.00 4.26
8957 9399 5.149977 CAGACGAAGGAAAAGAAAATGAGC 58.850 41.667 0.00 0.00 0.00 4.26
8958 9400 5.470098 TCCAGACGAAGGAAAAGAAAATGAG 59.530 40.000 0.00 0.00 30.71 2.90
8959 9401 5.373222 TCCAGACGAAGGAAAAGAAAATGA 58.627 37.500 0.00 0.00 30.71 2.57
8960 9402 5.239525 ACTCCAGACGAAGGAAAAGAAAATG 59.760 40.000 0.00 0.00 34.08 2.32
8961 9403 5.377478 ACTCCAGACGAAGGAAAAGAAAAT 58.623 37.500 0.00 0.00 34.08 1.82
8962 9404 4.777463 ACTCCAGACGAAGGAAAAGAAAA 58.223 39.130 0.00 0.00 34.08 2.29
8963 9405 4.101119 AGACTCCAGACGAAGGAAAAGAAA 59.899 41.667 0.00 0.00 34.08 2.52
8964 9406 3.641906 AGACTCCAGACGAAGGAAAAGAA 59.358 43.478 0.00 0.00 34.08 2.52
8965 9407 3.005897 CAGACTCCAGACGAAGGAAAAGA 59.994 47.826 0.00 0.00 34.08 2.52
8966 9408 3.321497 CAGACTCCAGACGAAGGAAAAG 58.679 50.000 0.00 0.00 34.08 2.27
8967 9409 2.037251 CCAGACTCCAGACGAAGGAAAA 59.963 50.000 0.00 0.00 34.08 2.29
8968 9410 1.618837 CCAGACTCCAGACGAAGGAAA 59.381 52.381 0.00 0.00 34.08 3.13
8969 9411 1.203013 TCCAGACTCCAGACGAAGGAA 60.203 52.381 0.00 0.00 34.08 3.36
8970 9412 0.404426 TCCAGACTCCAGACGAAGGA 59.596 55.000 0.00 0.00 0.00 3.36
8971 9413 0.528470 GTCCAGACTCCAGACGAAGG 59.472 60.000 0.00 0.00 0.00 3.46
8972 9414 1.201181 CAGTCCAGACTCCAGACGAAG 59.799 57.143 0.00 0.00 40.20 3.79
8973 9415 1.248486 CAGTCCAGACTCCAGACGAA 58.752 55.000 0.00 0.00 40.20 3.85
8974 9416 0.110678 ACAGTCCAGACTCCAGACGA 59.889 55.000 0.00 0.00 40.20 4.20
8975 9417 0.962489 AACAGTCCAGACTCCAGACG 59.038 55.000 0.00 0.00 40.20 4.18
8976 9418 1.001406 CCAACAGTCCAGACTCCAGAC 59.999 57.143 0.00 0.00 40.20 3.51
8977 9419 1.342074 CCAACAGTCCAGACTCCAGA 58.658 55.000 0.00 0.00 40.20 3.86
8978 9420 1.001406 GACCAACAGTCCAGACTCCAG 59.999 57.143 0.00 0.00 40.20 3.86
8979 9421 1.048601 GACCAACAGTCCAGACTCCA 58.951 55.000 0.00 0.00 40.20 3.86
8980 9422 3.917072 GACCAACAGTCCAGACTCC 57.083 57.895 0.00 0.00 40.20 3.85
8988 9430 5.927115 ACGAAAAGATTAGAGACCAACAGTC 59.073 40.000 0.00 0.00 46.71 3.51
8989 9431 5.855045 ACGAAAAGATTAGAGACCAACAGT 58.145 37.500 0.00 0.00 0.00 3.55
8990 9432 5.348997 GGACGAAAAGATTAGAGACCAACAG 59.651 44.000 0.00 0.00 0.00 3.16
8991 9433 5.011738 AGGACGAAAAGATTAGAGACCAACA 59.988 40.000 0.00 0.00 0.00 3.33
8992 9434 5.348997 CAGGACGAAAAGATTAGAGACCAAC 59.651 44.000 0.00 0.00 0.00 3.77
8993 9435 5.479306 CAGGACGAAAAGATTAGAGACCAA 58.521 41.667 0.00 0.00 0.00 3.67
8994 9436 4.620803 GCAGGACGAAAAGATTAGAGACCA 60.621 45.833 0.00 0.00 0.00 4.02
8995 9437 3.866327 GCAGGACGAAAAGATTAGAGACC 59.134 47.826 0.00 0.00 0.00 3.85
8996 9438 3.866327 GGCAGGACGAAAAGATTAGAGAC 59.134 47.826 0.00 0.00 0.00 3.36
8997 9439 3.769844 AGGCAGGACGAAAAGATTAGAGA 59.230 43.478 0.00 0.00 0.00 3.10
8998 9440 3.868077 CAGGCAGGACGAAAAGATTAGAG 59.132 47.826 0.00 0.00 0.00 2.43
8999 9441 3.861840 CAGGCAGGACGAAAAGATTAGA 58.138 45.455 0.00 0.00 0.00 2.10
9000 9442 2.352960 GCAGGCAGGACGAAAAGATTAG 59.647 50.000 0.00 0.00 0.00 1.73
9001 9443 2.356135 GCAGGCAGGACGAAAAGATTA 58.644 47.619 0.00 0.00 0.00 1.75
9002 9444 1.168714 GCAGGCAGGACGAAAAGATT 58.831 50.000 0.00 0.00 0.00 2.40
9003 9445 0.678048 GGCAGGCAGGACGAAAAGAT 60.678 55.000 0.00 0.00 0.00 2.40
9004 9446 1.302511 GGCAGGCAGGACGAAAAGA 60.303 57.895 0.00 0.00 0.00 2.52
9005 9447 2.680913 CGGCAGGCAGGACGAAAAG 61.681 63.158 0.00 0.00 43.61 2.27
9006 9448 2.668212 CGGCAGGCAGGACGAAAA 60.668 61.111 0.00 0.00 43.61 2.29
9079 9521 0.874607 GGTTACCGGACTGCTATGCG 60.875 60.000 9.46 0.00 0.00 4.73
9080 9522 0.532196 GGGTTACCGGACTGCTATGC 60.532 60.000 9.46 0.00 0.00 3.14
9081 9523 0.828022 TGGGTTACCGGACTGCTATG 59.172 55.000 9.46 0.00 40.75 2.23
9082 9524 1.575419 TTGGGTTACCGGACTGCTAT 58.425 50.000 9.46 0.00 40.75 2.97
9083 9525 1.276989 CTTTGGGTTACCGGACTGCTA 59.723 52.381 9.46 0.00 40.75 3.49
9084 9526 0.036306 CTTTGGGTTACCGGACTGCT 59.964 55.000 9.46 0.00 40.75 4.24
9085 9527 0.250597 ACTTTGGGTTACCGGACTGC 60.251 55.000 9.46 0.00 40.75 4.40
9086 9528 1.346722 AGACTTTGGGTTACCGGACTG 59.653 52.381 9.46 0.00 40.75 3.51
9087 9529 1.346722 CAGACTTTGGGTTACCGGACT 59.653 52.381 9.46 0.00 40.75 3.85
9088 9530 1.804601 CAGACTTTGGGTTACCGGAC 58.195 55.000 9.46 0.00 40.75 4.79
9089 9531 0.035739 GCAGACTTTGGGTTACCGGA 59.964 55.000 9.46 0.00 40.75 5.14
9090 9532 0.250553 TGCAGACTTTGGGTTACCGG 60.251 55.000 0.00 0.00 40.75 5.28
9091 9533 1.265905 GTTGCAGACTTTGGGTTACCG 59.734 52.381 0.00 0.00 40.75 4.02
9092 9534 1.265905 CGTTGCAGACTTTGGGTTACC 59.734 52.381 0.00 0.00 37.24 2.85
9093 9535 2.215196 TCGTTGCAGACTTTGGGTTAC 58.785 47.619 0.00 0.00 0.00 2.50
9094 9536 2.489971 CTCGTTGCAGACTTTGGGTTA 58.510 47.619 0.00 0.00 0.00 2.85
9095 9537 1.308998 CTCGTTGCAGACTTTGGGTT 58.691 50.000 0.00 0.00 0.00 4.11
9096 9538 1.166531 GCTCGTTGCAGACTTTGGGT 61.167 55.000 0.00 0.00 42.31 4.51
9097 9539 1.576421 GCTCGTTGCAGACTTTGGG 59.424 57.895 0.00 0.00 42.31 4.12
9098 9540 1.165907 TGGCTCGTTGCAGACTTTGG 61.166 55.000 5.65 0.00 45.15 3.28
9099 9541 0.662619 TTGGCTCGTTGCAGACTTTG 59.337 50.000 5.65 0.00 45.15 2.77
9100 9542 1.267806 CATTGGCTCGTTGCAGACTTT 59.732 47.619 5.65 0.00 45.15 2.66
9101 9543 0.877071 CATTGGCTCGTTGCAGACTT 59.123 50.000 5.65 0.00 45.15 3.01
9102 9544 0.035317 TCATTGGCTCGTTGCAGACT 59.965 50.000 5.65 0.00 45.15 3.24
9103 9545 0.445436 CTCATTGGCTCGTTGCAGAC 59.555 55.000 5.65 0.00 45.15 3.51
9104 9546 0.674581 CCTCATTGGCTCGTTGCAGA 60.675 55.000 5.65 0.00 45.15 4.26
9105 9547 0.957395 ACCTCATTGGCTCGTTGCAG 60.957 55.000 5.65 0.00 45.15 4.41
9106 9548 0.323302 TACCTCATTGGCTCGTTGCA 59.677 50.000 5.65 0.00 45.15 4.08
9107 9549 1.448985 TTACCTCATTGGCTCGTTGC 58.551 50.000 0.00 0.00 40.22 4.17
9108 9550 2.614057 GGATTACCTCATTGGCTCGTTG 59.386 50.000 0.00 0.00 40.22 4.10
9109 9551 2.238646 TGGATTACCTCATTGGCTCGTT 59.761 45.455 0.00 0.00 40.22 3.85
9110 9552 1.837439 TGGATTACCTCATTGGCTCGT 59.163 47.619 0.00 0.00 40.22 4.18
9111 9553 2.620251 TGGATTACCTCATTGGCTCG 57.380 50.000 0.00 0.00 40.22 5.03
9112 9554 4.090761 TCATGGATTACCTCATTGGCTC 57.909 45.455 0.00 0.00 40.22 4.70
9113 9555 4.508047 GGATCATGGATTACCTCATTGGCT 60.508 45.833 0.00 0.00 40.22 4.75
9114 9556 3.760684 GGATCATGGATTACCTCATTGGC 59.239 47.826 0.00 0.00 40.22 4.52
9115 9557 4.989277 TGGATCATGGATTACCTCATTGG 58.011 43.478 0.00 0.00 42.93 3.16
9116 9558 6.152323 GGAATGGATCATGGATTACCTCATTG 59.848 42.308 0.00 0.00 37.04 2.82
9117 9559 6.183361 TGGAATGGATCATGGATTACCTCATT 60.183 38.462 0.00 0.00 37.04 2.57
9118 9560 5.314039 TGGAATGGATCATGGATTACCTCAT 59.686 40.000 0.00 0.00 37.04 2.90
9119 9561 4.664536 TGGAATGGATCATGGATTACCTCA 59.335 41.667 0.00 0.00 37.04 3.86
9120 9562 5.006386 GTGGAATGGATCATGGATTACCTC 58.994 45.833 0.00 0.00 37.04 3.85
9121 9563 4.202609 GGTGGAATGGATCATGGATTACCT 60.203 45.833 0.00 0.00 37.04 3.08
9122 9564 4.082125 GGTGGAATGGATCATGGATTACC 58.918 47.826 0.00 0.00 0.00 2.85
9123 9565 4.082125 GGGTGGAATGGATCATGGATTAC 58.918 47.826 0.00 0.00 0.00 1.89
9124 9566 3.244875 CGGGTGGAATGGATCATGGATTA 60.245 47.826 0.00 0.00 0.00 1.75
9125 9567 2.489619 CGGGTGGAATGGATCATGGATT 60.490 50.000 0.00 0.00 0.00 3.01
9126 9568 1.074405 CGGGTGGAATGGATCATGGAT 59.926 52.381 0.00 0.00 0.00 3.41
9127 9569 0.473755 CGGGTGGAATGGATCATGGA 59.526 55.000 0.00 0.00 0.00 3.41
9128 9570 0.183492 ACGGGTGGAATGGATCATGG 59.817 55.000 0.00 0.00 0.00 3.66
9129 9571 1.134128 TGACGGGTGGAATGGATCATG 60.134 52.381 0.00 0.00 0.00 3.07
9130 9572 1.141657 CTGACGGGTGGAATGGATCAT 59.858 52.381 0.00 0.00 0.00 2.45
9131 9573 0.541392 CTGACGGGTGGAATGGATCA 59.459 55.000 0.00 0.00 0.00 2.92
9132 9574 0.541863 ACTGACGGGTGGAATGGATC 59.458 55.000 0.00 0.00 0.00 3.36
9133 9575 0.991920 AACTGACGGGTGGAATGGAT 59.008 50.000 0.00 0.00 0.00 3.41
9134 9576 0.768622 AAACTGACGGGTGGAATGGA 59.231 50.000 0.00 0.00 0.00 3.41
9135 9577 1.616159 AAAACTGACGGGTGGAATGG 58.384 50.000 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.