Multiple sequence alignment - TraesCS2B01G215200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G215200 chr2B 100.000 8260 0 0 1 8260 200565139 200573398 0.000000e+00 15254.0
1 TraesCS2B01G215200 chr2B 100.000 28 0 0 6378 6405 39416300 39416273 1.500000e-02 52.8
2 TraesCS2B01G215200 chr2D 95.955 2126 55 15 872 2991 142660530 142662630 0.000000e+00 3421.0
3 TraesCS2B01G215200 chr2D 96.671 1682 45 3 3513 5187 142663107 142664784 0.000000e+00 2785.0
4 TraesCS2B01G215200 chr2D 94.794 1191 42 7 5189 6378 142664899 142666070 0.000000e+00 1838.0
5 TraesCS2B01G215200 chr2D 96.676 1053 16 11 7218 8260 142666760 142667803 0.000000e+00 1733.0
6 TraesCS2B01G215200 chr2D 85.509 697 54 32 6549 7229 142666073 142666738 0.000000e+00 684.0
7 TraesCS2B01G215200 chr2D 95.148 371 8 4 3153 3514 142662629 142662998 2.000000e-160 577.0
8 TraesCS2B01G215200 chr2D 96.774 31 1 0 6375 6405 22212322 22212352 1.500000e-02 52.8
9 TraesCS2B01G215200 chr2A 95.503 1601 42 11 872 2467 158460382 158458807 0.000000e+00 2531.0
10 TraesCS2B01G215200 chr2A 95.986 1470 41 7 4675 6132 158456365 158454902 0.000000e+00 2372.0
11 TraesCS2B01G215200 chr2A 92.791 1401 58 15 6897 8255 158454240 158452841 0.000000e+00 1988.0
12 TraesCS2B01G215200 chr2A 95.641 1170 33 11 3513 4679 158457641 158456487 0.000000e+00 1862.0
13 TraesCS2B01G215200 chr2A 97.917 528 9 2 2466 2991 158458645 158458118 0.000000e+00 913.0
14 TraesCS2B01G215200 chr2A 97.521 363 8 1 3153 3514 158458119 158457757 3.270000e-173 619.0
15 TraesCS2B01G215200 chr2A 94.064 219 12 1 6159 6376 158454905 158454687 1.720000e-86 331.0
16 TraesCS2B01G215200 chr2A 84.751 341 24 11 6549 6888 158454682 158454369 4.810000e-82 316.0
17 TraesCS2B01G215200 chr2A 91.954 174 12 2 2982 3155 94112556 94112385 8.280000e-60 243.0
18 TraesCS2B01G215200 chr4D 94.444 594 33 0 283 876 389567739 389568332 0.000000e+00 915.0
19 TraesCS2B01G215200 chr4D 96.186 236 8 1 1 235 389522000 389522235 1.300000e-102 385.0
20 TraesCS2B01G215200 chr4D 93.567 171 11 0 2988 3158 75782219 75782049 1.060000e-63 255.0
21 TraesCS2B01G215200 chr7B 76.145 830 187 9 49 874 402784194 402783372 7.660000e-115 425.0
22 TraesCS2B01G215200 chr7B 75.610 492 111 8 83 569 323831429 323831916 1.390000e-57 235.0
23 TraesCS2B01G215200 chr7B 92.661 109 7 1 6402 6510 458512285 458512392 1.110000e-33 156.0
24 TraesCS2B01G215200 chr1A 77.455 550 117 6 100 645 320293629 320293083 1.030000e-83 322.0
25 TraesCS2B01G215200 chr1A 74.067 563 137 9 11 567 487725016 487724457 1.080000e-53 222.0
26 TraesCS2B01G215200 chr1A 91.228 114 8 2 6397 6510 427816467 427816356 3.990000e-33 154.0
27 TraesCS2B01G215200 chr1A 89.362 94 7 3 2815 2907 417400619 417400710 1.880000e-21 115.0
28 TraesCS2B01G215200 chr1A 89.362 94 7 3 2815 2907 425264028 425264119 1.880000e-21 115.0
29 TraesCS2B01G215200 chr1B 94.286 175 9 1 2984 3157 323683345 323683519 4.910000e-67 267.0
30 TraesCS2B01G215200 chr1B 74.612 516 115 13 89 596 11869601 11869094 6.490000e-51 213.0
31 TraesCS2B01G215200 chr1B 92.437 119 8 1 6392 6510 610352098 610352215 1.430000e-37 169.0
32 TraesCS2B01G215200 chr6D 95.152 165 8 0 2990 3154 293177404 293177240 2.290000e-65 261.0
33 TraesCS2B01G215200 chr6D 92.571 175 13 0 2982 3156 392896967 392897141 1.380000e-62 252.0
34 TraesCS2B01G215200 chr6D 75.394 508 120 5 83 587 419777446 419776941 2.980000e-59 241.0
35 TraesCS2B01G215200 chr6D 91.818 110 8 1 6402 6511 79857104 79857212 1.440000e-32 152.0
36 TraesCS2B01G215200 chr4A 94.118 170 10 0 2989 3158 30396538 30396707 8.220000e-65 259.0
37 TraesCS2B01G215200 chr4A 74.800 500 119 6 83 578 720026654 720026158 1.400000e-52 219.0
38 TraesCS2B01G215200 chr1D 77.212 452 98 5 121 569 452109782 452110231 8.220000e-65 259.0
39 TraesCS2B01G215200 chr1D 93.103 174 11 1 2987 3159 238940383 238940210 3.830000e-63 254.0
40 TraesCS2B01G215200 chr7D 93.103 174 11 1 2983 3155 480637877 480637704 3.830000e-63 254.0
41 TraesCS2B01G215200 chr7D 87.209 86 10 1 2815 2900 582304882 582304798 6.820000e-16 97.1
42 TraesCS2B01G215200 chr4B 92.135 178 12 2 2983 3160 592024404 592024229 4.950000e-62 250.0
43 TraesCS2B01G215200 chr4B 91.597 119 8 2 6392 6510 600375695 600375811 6.630000e-36 163.0
44 TraesCS2B01G215200 chr3B 75.197 508 120 6 83 587 661588533 661588029 1.390000e-57 235.0
45 TraesCS2B01G215200 chr5D 73.896 498 114 14 89 578 8432064 8432553 1.420000e-42 185.0
46 TraesCS2B01G215200 chr3A 92.857 112 7 1 6401 6512 482063237 482063127 2.390000e-35 161.0
47 TraesCS2B01G215200 chr7A 92.661 109 7 1 6399 6507 538102525 538102632 1.110000e-33 156.0
48 TraesCS2B01G215200 chr7A 89.076 119 11 2 6393 6511 700533348 700533232 6.680000e-31 147.0
49 TraesCS2B01G215200 chr7A 93.243 74 2 3 2815 2888 103155681 103155751 1.130000e-18 106.0
50 TraesCS2B01G215200 chr5B 89.831 118 10 2 6394 6511 115399112 115399227 5.160000e-32 150.0
51 TraesCS2B01G215200 chr5B 93.243 74 4 1 2815 2888 559679765 559679693 3.150000e-19 108.0
52 TraesCS2B01G215200 chr3D 91.463 82 6 1 2819 2900 75147964 75148044 2.440000e-20 111.0
53 TraesCS2B01G215200 chr5A 87.209 86 10 1 2815 2900 3613005 3613089 6.820000e-16 97.1
54 TraesCS2B01G215200 chr5A 100.000 28 0 0 6374 6401 7746323 7746296 1.500000e-02 52.8
55 TraesCS2B01G215200 chr6B 73.828 256 55 10 346 596 117640112 117639864 3.170000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G215200 chr2B 200565139 200573398 8259 False 15254.000000 15254 100.00000 1 8260 1 chr2B.!!$F1 8259
1 TraesCS2B01G215200 chr2D 142660530 142667803 7273 False 1839.666667 3421 94.12550 872 8260 6 chr2D.!!$F2 7388
2 TraesCS2B01G215200 chr2A 158452841 158460382 7541 True 1366.500000 2531 94.27175 872 8255 8 chr2A.!!$R2 7383
3 TraesCS2B01G215200 chr4D 389567739 389568332 593 False 915.000000 915 94.44400 283 876 1 chr4D.!!$F2 593
4 TraesCS2B01G215200 chr7B 402783372 402784194 822 True 425.000000 425 76.14500 49 874 1 chr7B.!!$R1 825
5 TraesCS2B01G215200 chr1A 320293083 320293629 546 True 322.000000 322 77.45500 100 645 1 chr1A.!!$R1 545
6 TraesCS2B01G215200 chr1A 487724457 487725016 559 True 222.000000 222 74.06700 11 567 1 chr1A.!!$R3 556
7 TraesCS2B01G215200 chr1B 11869094 11869601 507 True 213.000000 213 74.61200 89 596 1 chr1B.!!$R1 507
8 TraesCS2B01G215200 chr6D 419776941 419777446 505 True 241.000000 241 75.39400 83 587 1 chr6D.!!$R2 504
9 TraesCS2B01G215200 chr3B 661588029 661588533 504 True 235.000000 235 75.19700 83 587 1 chr3B.!!$R1 504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
835 838 0.104304 AAACGCGTGTTCTGGTCTCT 59.896 50.000 14.98 0.0 37.31 3.10 F
1555 1562 1.110442 TGGGGCAAAGTGTGTTTGAG 58.890 50.000 1.68 0.0 0.00 3.02 F
1556 1563 1.111277 GGGGCAAAGTGTGTTTGAGT 58.889 50.000 1.68 0.0 0.00 3.41 F
1589 1596 1.616374 GGGGATTCGGATGAGAGACTC 59.384 57.143 0.00 0.0 0.00 3.36 F
1590 1597 1.616374 GGGATTCGGATGAGAGACTCC 59.384 57.143 0.00 0.0 36.03 3.85 F
2892 3067 1.734163 GACACTTATGTTGGACCGGG 58.266 55.000 6.32 0.0 39.95 5.73 F
4622 4926 0.908198 AGAGCCAGAGGTTGTCATCC 59.092 55.000 0.00 0.0 0.00 3.51 F
6391 6946 0.470341 GCAAGTACTCCCTCCATCCC 59.530 60.000 0.00 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1636 1643 0.034670 ATTGCTGCCCTTGACCTCTC 60.035 55.000 0.0 0.0 0.00 3.20 R
3185 3364 0.396435 TAACACACAGCACCTCAGGG 59.604 55.000 0.0 0.0 38.88 4.45 R
3648 3951 1.159285 CGTGACATGAGCCACACAAT 58.841 50.000 0.0 0.0 33.13 2.71 R
3689 3992 3.434641 CAGAAACGAGTGATGAACATGCT 59.565 43.478 0.0 0.0 0.00 3.79 R
3928 4231 1.238439 CCACATATTCCCATCCGTGC 58.762 55.000 0.0 0.0 0.00 5.34 R
4743 5178 1.396301 GCGCAAGGAGATTCAACTCAG 59.604 52.381 0.3 0.0 38.51 3.35 R
6532 7087 0.031414 TAACCTACTCCCTCTGGCCC 60.031 60.000 0.0 0.0 0.00 5.80 R
7834 8598 0.179097 GAAGATCGAGTGGGAGTGCC 60.179 60.000 0.0 0.0 0.00 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 8.730680 TGTTCTAGCTTTTCTCCATTGAATAAC 58.269 33.333 0.00 0.00 0.00 1.89
30 31 6.272822 AGCTTTTCTCCATTGAATAACACC 57.727 37.500 0.00 0.00 0.00 4.16
31 32 5.774690 AGCTTTTCTCCATTGAATAACACCA 59.225 36.000 0.00 0.00 0.00 4.17
34 35 6.588719 TTTCTCCATTGAATAACACCAAGG 57.411 37.500 0.00 0.00 0.00 3.61
36 37 5.886609 TCTCCATTGAATAACACCAAGGAA 58.113 37.500 0.00 0.00 0.00 3.36
38 39 5.640147 TCCATTGAATAACACCAAGGAAGT 58.360 37.500 0.00 0.00 0.00 3.01
39 40 6.785076 TCCATTGAATAACACCAAGGAAGTA 58.215 36.000 0.00 0.00 0.00 2.24
42 43 6.887626 TTGAATAACACCAAGGAAGTAACC 57.112 37.500 0.00 0.00 0.00 2.85
45 46 3.782656 AACACCAAGGAAGTAACCGAT 57.217 42.857 0.00 0.00 34.73 4.18
46 47 3.782656 ACACCAAGGAAGTAACCGATT 57.217 42.857 0.00 0.00 34.73 3.34
60 61 6.281405 AGTAACCGATTTGACCATACTCATC 58.719 40.000 0.00 0.00 0.00 2.92
66 67 5.233050 CGATTTGACCATACTCATCACTGTC 59.767 44.000 0.00 0.00 0.00 3.51
67 68 5.482163 TTTGACCATACTCATCACTGTCA 57.518 39.130 0.00 0.00 0.00 3.58
75 76 0.686789 TCATCACTGTCACCACCCAG 59.313 55.000 0.00 0.00 34.82 4.45
77 78 2.129555 ATCACTGTCACCACCCAGGC 62.130 60.000 0.00 0.00 43.14 4.85
81 82 2.985847 GTCACCACCCAGGCTTGC 60.986 66.667 0.00 0.00 43.14 4.01
111 112 4.019174 CAAGTTTCTCCATAATGGCCTGT 58.981 43.478 3.32 0.00 37.47 4.00
113 114 5.450818 AGTTTCTCCATAATGGCCTGTAA 57.549 39.130 3.32 0.00 37.47 2.41
133 134 0.543749 ATAGGACCACTCAAGCCTGC 59.456 55.000 0.00 0.00 32.04 4.85
218 220 8.483218 CGCTTCATAAAATGTAGACACTCATAG 58.517 37.037 0.00 0.00 30.18 2.23
248 250 8.768955 CAGATAATGTTGTCAGTAATTAGCCTC 58.231 37.037 0.00 0.00 0.00 4.70
289 291 8.367156 TGATTGTTCATGTGAGATTATATCCGA 58.633 33.333 0.00 0.00 0.00 4.55
369 371 3.490249 GCATAAACTTATGGGGCGAAACC 60.490 47.826 10.65 0.00 40.61 3.27
387 390 1.702957 ACCGAGAAAGATGGGTTGGAA 59.297 47.619 0.00 0.00 0.00 3.53
565 568 3.490348 ACTTTGTGGGGAACATCTGAAG 58.510 45.455 0.00 0.00 38.99 3.02
580 583 7.992754 ACATCTGAAGAAGAGCTGTTTTTAT 57.007 32.000 0.00 0.00 38.67 1.40
638 641 2.543777 TGTGCTGAGTAACCTTCACC 57.456 50.000 0.00 0.00 0.00 4.02
672 675 1.003355 ACTTGGTCCATGCCGACTG 60.003 57.895 4.67 0.00 33.07 3.51
741 744 1.152567 AGCTCCTCCGGATCCTCTG 60.153 63.158 3.57 0.00 0.00 3.35
750 753 0.741326 CGGATCCTCTGTGATGACGT 59.259 55.000 10.75 0.00 0.00 4.34
756 759 3.951663 TCCTCTGTGATGACGTCTAAGA 58.048 45.455 17.92 10.77 0.00 2.10
779 782 5.664294 AATTTGCAAGTGCCTTGATCATA 57.336 34.783 16.28 4.51 43.42 2.15
829 832 0.934496 TGGAAGAAACGCGTGTTCTG 59.066 50.000 26.13 0.00 37.31 3.02
835 838 0.104304 AAACGCGTGTTCTGGTCTCT 59.896 50.000 14.98 0.00 37.31 3.10
1028 1033 2.811799 GCTCCGAAGCTCCTCCTC 59.188 66.667 0.00 0.00 45.55 3.71
1302 1309 5.263948 TCGTCGCGATAGATTTATATCAGC 58.736 41.667 14.06 0.00 39.76 4.26
1310 1317 7.594758 GCGATAGATTTATATCAGCTGGATCTC 59.405 40.741 15.13 6.30 36.19 2.75
1454 1461 4.876679 GGTAGTAGGTCTCTTTCAATTGGC 59.123 45.833 5.42 0.00 0.00 4.52
1460 1467 3.149196 GTCTCTTTCAATTGGCCACAGA 58.851 45.455 3.88 0.00 0.00 3.41
1551 1558 3.168035 TGATATGGGGCAAAGTGTGTT 57.832 42.857 0.00 0.00 0.00 3.32
1552 1559 3.505386 TGATATGGGGCAAAGTGTGTTT 58.495 40.909 0.00 0.00 0.00 2.83
1553 1560 3.257873 TGATATGGGGCAAAGTGTGTTTG 59.742 43.478 0.00 0.00 0.00 2.93
1554 1561 1.786937 ATGGGGCAAAGTGTGTTTGA 58.213 45.000 1.68 0.00 0.00 2.69
1555 1562 1.110442 TGGGGCAAAGTGTGTTTGAG 58.890 50.000 1.68 0.00 0.00 3.02
1556 1563 1.111277 GGGGCAAAGTGTGTTTGAGT 58.889 50.000 1.68 0.00 0.00 3.41
1589 1596 1.616374 GGGGATTCGGATGAGAGACTC 59.384 57.143 0.00 0.00 0.00 3.36
1590 1597 1.616374 GGGATTCGGATGAGAGACTCC 59.384 57.143 0.00 0.00 36.03 3.85
1631 1638 5.725551 AAATGGGTAGAGAGAGAGAGAGA 57.274 43.478 0.00 0.00 0.00 3.10
1632 1639 4.982241 ATGGGTAGAGAGAGAGAGAGAG 57.018 50.000 0.00 0.00 0.00 3.20
1633 1640 4.002256 TGGGTAGAGAGAGAGAGAGAGA 57.998 50.000 0.00 0.00 0.00 3.10
1634 1641 3.967326 TGGGTAGAGAGAGAGAGAGAGAG 59.033 52.174 0.00 0.00 0.00 3.20
1635 1642 4.223953 GGGTAGAGAGAGAGAGAGAGAGA 58.776 52.174 0.00 0.00 0.00 3.10
1636 1643 4.282195 GGGTAGAGAGAGAGAGAGAGAGAG 59.718 54.167 0.00 0.00 0.00 3.20
1688 1695 5.446473 CGCTCTGTGACTTTGGATAAATGAC 60.446 44.000 0.00 0.00 0.00 3.06
1824 1831 6.833933 AGTTTTGGGTCAGAAACTGTATCTTT 59.166 34.615 1.11 0.00 42.67 2.52
1849 1856 3.629855 TGTTTGCGGTATGATGGGTTATG 59.370 43.478 0.00 0.00 0.00 1.90
1970 1978 6.825610 AGCCCAAGTTGTTTTTATTTCATCA 58.174 32.000 1.45 0.00 0.00 3.07
1982 1991 8.575589 GTTTTTATTTCATCATTTTGCCCCTTT 58.424 29.630 0.00 0.00 0.00 3.11
1985 1994 5.565455 TTTCATCATTTTGCCCCTTTTCT 57.435 34.783 0.00 0.00 0.00 2.52
1988 1997 6.678568 TCATCATTTTGCCCCTTTTCTAAA 57.321 33.333 0.00 0.00 0.00 1.85
2243 2253 8.507524 AAGCCTCATGTAAATTTAACCTAGAC 57.492 34.615 0.00 0.00 0.00 2.59
2509 2683 6.827727 AGGTATTGTATTTATCGAGGCACTT 58.172 36.000 0.00 0.00 41.55 3.16
2839 3014 5.888982 ACCTCCGATCCATAATAAGTGTT 57.111 39.130 0.00 0.00 0.00 3.32
2882 3057 5.095691 AGTTCAAAACTGCGACACTTATG 57.904 39.130 0.00 0.00 41.01 1.90
2892 3067 1.734163 GACACTTATGTTGGACCGGG 58.266 55.000 6.32 0.00 39.95 5.73
2992 3167 9.959721 AACAAACATCTCCAACATAGTTATACT 57.040 29.630 0.00 0.00 0.00 2.12
2993 3168 9.601217 ACAAACATCTCCAACATAGTTATACTC 57.399 33.333 0.00 0.00 0.00 2.59
2994 3169 9.046296 CAAACATCTCCAACATAGTTATACTCC 57.954 37.037 0.00 0.00 0.00 3.85
2995 3170 7.304497 ACATCTCCAACATAGTTATACTCCC 57.696 40.000 0.00 0.00 0.00 4.30
2996 3171 7.076446 ACATCTCCAACATAGTTATACTCCCT 58.924 38.462 0.00 0.00 0.00 4.20
2997 3172 7.233757 ACATCTCCAACATAGTTATACTCCCTC 59.766 40.741 0.00 0.00 0.00 4.30
2998 3173 6.075984 TCTCCAACATAGTTATACTCCCTCC 58.924 44.000 0.00 0.00 0.00 4.30
2999 3174 4.831155 TCCAACATAGTTATACTCCCTCCG 59.169 45.833 0.00 0.00 0.00 4.63
3000 3175 4.587684 CCAACATAGTTATACTCCCTCCGT 59.412 45.833 0.00 0.00 0.00 4.69
3001 3176 5.070047 CCAACATAGTTATACTCCCTCCGTT 59.930 44.000 0.00 0.00 0.00 4.44
3002 3177 6.214399 CAACATAGTTATACTCCCTCCGTTC 58.786 44.000 0.00 0.00 0.00 3.95
3003 3178 4.831710 ACATAGTTATACTCCCTCCGTTCC 59.168 45.833 0.00 0.00 0.00 3.62
3004 3179 3.684408 AGTTATACTCCCTCCGTTCCT 57.316 47.619 0.00 0.00 0.00 3.36
3005 3180 4.803329 AGTTATACTCCCTCCGTTCCTA 57.197 45.455 0.00 0.00 0.00 2.94
3006 3181 5.134725 AGTTATACTCCCTCCGTTCCTAA 57.865 43.478 0.00 0.00 0.00 2.69
3007 3182 5.522641 AGTTATACTCCCTCCGTTCCTAAA 58.477 41.667 0.00 0.00 0.00 1.85
3008 3183 6.141790 AGTTATACTCCCTCCGTTCCTAAAT 58.858 40.000 0.00 0.00 0.00 1.40
3009 3184 7.300658 AGTTATACTCCCTCCGTTCCTAAATA 58.699 38.462 0.00 0.00 0.00 1.40
3010 3185 7.954620 AGTTATACTCCCTCCGTTCCTAAATAT 59.045 37.037 0.00 0.00 0.00 1.28
3011 3186 8.591940 GTTATACTCCCTCCGTTCCTAAATATT 58.408 37.037 0.00 0.00 0.00 1.28
3012 3187 5.291905 ACTCCCTCCGTTCCTAAATATTG 57.708 43.478 0.00 0.00 0.00 1.90
3013 3188 4.102681 ACTCCCTCCGTTCCTAAATATTGG 59.897 45.833 0.00 0.00 0.00 3.16
3014 3189 4.042174 TCCCTCCGTTCCTAAATATTGGT 58.958 43.478 0.00 0.00 0.00 3.67
3015 3190 4.102054 TCCCTCCGTTCCTAAATATTGGTC 59.898 45.833 0.00 0.00 0.00 4.02
3016 3191 4.102681 CCCTCCGTTCCTAAATATTGGTCT 59.897 45.833 0.00 0.00 0.00 3.85
3017 3192 5.397559 CCCTCCGTTCCTAAATATTGGTCTT 60.398 44.000 0.00 0.00 0.00 3.01
3018 3193 6.120220 CCTCCGTTCCTAAATATTGGTCTTT 58.880 40.000 0.00 0.00 0.00 2.52
3019 3194 6.260271 CCTCCGTTCCTAAATATTGGTCTTTC 59.740 42.308 0.00 0.00 0.00 2.62
3020 3195 6.954232 TCCGTTCCTAAATATTGGTCTTTCT 58.046 36.000 0.00 0.00 0.00 2.52
3021 3196 8.081517 TCCGTTCCTAAATATTGGTCTTTCTA 57.918 34.615 0.00 0.00 0.00 2.10
3022 3197 8.202137 TCCGTTCCTAAATATTGGTCTTTCTAG 58.798 37.037 0.00 0.00 0.00 2.43
3023 3198 8.202137 CCGTTCCTAAATATTGGTCTTTCTAGA 58.798 37.037 0.00 0.00 0.00 2.43
3024 3199 9.250624 CGTTCCTAAATATTGGTCTTTCTAGAG 57.749 37.037 0.00 0.00 0.00 2.43
3034 3209 7.969536 TTGGTCTTTCTAGAGATTTCAACAG 57.030 36.000 0.00 0.00 0.00 3.16
3035 3210 6.467677 TGGTCTTTCTAGAGATTTCAACAGG 58.532 40.000 0.00 0.00 0.00 4.00
3036 3211 6.043243 TGGTCTTTCTAGAGATTTCAACAGGT 59.957 38.462 0.00 0.00 0.00 4.00
3037 3212 6.370166 GGTCTTTCTAGAGATTTCAACAGGTG 59.630 42.308 0.00 0.00 0.00 4.00
3038 3213 7.155328 GTCTTTCTAGAGATTTCAACAGGTGA 58.845 38.462 0.00 0.00 0.00 4.02
3039 3214 7.117092 GTCTTTCTAGAGATTTCAACAGGTGAC 59.883 40.741 0.00 0.00 35.39 3.67
3040 3215 6.672266 TTCTAGAGATTTCAACAGGTGACT 57.328 37.500 0.00 0.00 46.44 3.41
3041 3216 7.776618 TTCTAGAGATTTCAACAGGTGACTA 57.223 36.000 0.00 0.00 40.21 2.59
3042 3217 7.159322 TCTAGAGATTTCAACAGGTGACTAC 57.841 40.000 0.00 0.00 40.21 2.73
3043 3218 5.808366 AGAGATTTCAACAGGTGACTACA 57.192 39.130 0.00 0.00 40.21 2.74
3044 3219 6.365970 AGAGATTTCAACAGGTGACTACAT 57.634 37.500 0.00 0.00 40.21 2.29
3045 3220 7.482169 AGAGATTTCAACAGGTGACTACATA 57.518 36.000 0.00 0.00 40.21 2.29
3046 3221 7.324178 AGAGATTTCAACAGGTGACTACATAC 58.676 38.462 0.00 0.00 40.21 2.39
3047 3222 6.100004 AGATTTCAACAGGTGACTACATACG 58.900 40.000 0.00 0.00 40.21 3.06
3048 3223 5.456548 TTTCAACAGGTGACTACATACGA 57.543 39.130 0.00 0.00 40.21 3.43
3049 3224 5.456548 TTCAACAGGTGACTACATACGAA 57.543 39.130 0.00 0.00 40.21 3.85
3050 3225 5.055642 TCAACAGGTGACTACATACGAAG 57.944 43.478 0.00 0.00 40.21 3.79
3051 3226 3.505464 ACAGGTGACTACATACGAAGC 57.495 47.619 0.00 0.00 40.21 3.86
3052 3227 2.823747 ACAGGTGACTACATACGAAGCA 59.176 45.455 0.00 0.00 40.21 3.91
3053 3228 3.257375 ACAGGTGACTACATACGAAGCAA 59.743 43.478 0.00 0.00 40.21 3.91
3054 3229 4.242475 CAGGTGACTACATACGAAGCAAA 58.758 43.478 0.00 0.00 40.21 3.68
3055 3230 4.688879 CAGGTGACTACATACGAAGCAAAA 59.311 41.667 0.00 0.00 40.21 2.44
3056 3231 5.351465 CAGGTGACTACATACGAAGCAAAAT 59.649 40.000 0.00 0.00 40.21 1.82
3057 3232 5.351465 AGGTGACTACATACGAAGCAAAATG 59.649 40.000 0.00 0.00 40.61 2.32
3058 3233 5.350365 GGTGACTACATACGAAGCAAAATGA 59.650 40.000 0.00 0.00 0.00 2.57
3059 3234 6.128391 GGTGACTACATACGAAGCAAAATGAA 60.128 38.462 0.00 0.00 0.00 2.57
3060 3235 7.414098 GGTGACTACATACGAAGCAAAATGAAT 60.414 37.037 0.00 0.00 0.00 2.57
3061 3236 7.426456 GTGACTACATACGAAGCAAAATGAATG 59.574 37.037 0.00 0.00 0.00 2.67
3062 3237 7.333174 TGACTACATACGAAGCAAAATGAATGA 59.667 33.333 0.00 0.00 0.00 2.57
3063 3238 8.039603 ACTACATACGAAGCAAAATGAATGAA 57.960 30.769 0.00 0.00 0.00 2.57
3064 3239 8.677300 ACTACATACGAAGCAAAATGAATGAAT 58.323 29.630 0.00 0.00 0.00 2.57
3065 3240 7.975866 ACATACGAAGCAAAATGAATGAATC 57.024 32.000 0.00 0.00 0.00 2.52
3066 3241 7.765307 ACATACGAAGCAAAATGAATGAATCT 58.235 30.769 0.00 0.00 0.00 2.40
3067 3242 8.892723 ACATACGAAGCAAAATGAATGAATCTA 58.107 29.630 0.00 0.00 0.00 1.98
3068 3243 9.888878 CATACGAAGCAAAATGAATGAATCTAT 57.111 29.630 0.00 0.00 0.00 1.98
3069 3244 9.888878 ATACGAAGCAAAATGAATGAATCTATG 57.111 29.630 0.00 0.00 0.00 2.23
3070 3245 6.694411 ACGAAGCAAAATGAATGAATCTATGC 59.306 34.615 0.00 0.00 0.00 3.14
3071 3246 6.916387 CGAAGCAAAATGAATGAATCTATGCT 59.084 34.615 0.00 0.00 0.00 3.79
3072 3247 7.113124 CGAAGCAAAATGAATGAATCTATGCTC 59.887 37.037 0.00 0.00 0.00 4.26
3073 3248 7.584122 AGCAAAATGAATGAATCTATGCTCT 57.416 32.000 0.00 0.00 0.00 4.09
3074 3249 8.687292 AGCAAAATGAATGAATCTATGCTCTA 57.313 30.769 0.00 0.00 0.00 2.43
3075 3250 9.128404 AGCAAAATGAATGAATCTATGCTCTAA 57.872 29.630 0.00 0.00 0.00 2.10
3076 3251 9.740239 GCAAAATGAATGAATCTATGCTCTAAA 57.260 29.630 0.00 0.00 0.00 1.85
3106 3281 9.524496 TGTCTATATACATCCGTATTTGGTAGT 57.476 33.333 0.00 0.00 39.17 2.73
3108 3283 9.182214 TCTATATACATCCGTATTTGGTAGTCC 57.818 37.037 0.00 0.00 39.17 3.85
3109 3284 7.786046 ATATACATCCGTATTTGGTAGTCCA 57.214 36.000 0.00 0.00 39.17 4.02
3110 3285 6.681729 ATACATCCGTATTTGGTAGTCCAT 57.318 37.500 0.00 0.00 35.32 3.41
3111 3286 5.367945 ACATCCGTATTTGGTAGTCCATT 57.632 39.130 0.00 0.00 43.91 3.16
3112 3287 5.751586 ACATCCGTATTTGGTAGTCCATTT 58.248 37.500 0.00 0.00 43.91 2.32
3113 3288 5.588648 ACATCCGTATTTGGTAGTCCATTTG 59.411 40.000 0.00 0.00 43.91 2.32
3114 3289 5.423704 TCCGTATTTGGTAGTCCATTTGA 57.576 39.130 0.00 0.00 43.91 2.69
3115 3290 5.806818 TCCGTATTTGGTAGTCCATTTGAA 58.193 37.500 0.00 0.00 43.91 2.69
3116 3291 6.239396 TCCGTATTTGGTAGTCCATTTGAAA 58.761 36.000 0.00 0.00 43.91 2.69
3117 3292 6.887545 TCCGTATTTGGTAGTCCATTTGAAAT 59.112 34.615 0.00 0.00 43.91 2.17
3118 3293 7.066525 TCCGTATTTGGTAGTCCATTTGAAATC 59.933 37.037 0.00 0.00 43.91 2.17
3119 3294 7.067008 CCGTATTTGGTAGTCCATTTGAAATCT 59.933 37.037 0.00 0.00 43.91 2.40
3120 3295 8.122952 CGTATTTGGTAGTCCATTTGAAATCTC 58.877 37.037 0.00 0.00 43.91 2.75
3121 3296 9.178758 GTATTTGGTAGTCCATTTGAAATCTCT 57.821 33.333 0.00 0.00 43.91 3.10
3123 3298 9.753674 ATTTGGTAGTCCATTTGAAATCTCTAA 57.246 29.630 0.00 0.00 43.91 2.10
3124 3299 9.581289 TTTGGTAGTCCATTTGAAATCTCTAAA 57.419 29.630 0.00 0.00 43.91 1.85
3125 3300 9.581289 TTGGTAGTCCATTTGAAATCTCTAAAA 57.419 29.630 0.00 0.00 43.91 1.52
3126 3301 9.231297 TGGTAGTCCATTTGAAATCTCTAAAAG 57.769 33.333 0.00 0.00 39.03 2.27
3127 3302 8.678199 GGTAGTCCATTTGAAATCTCTAAAAGG 58.322 37.037 0.00 0.00 0.00 3.11
3128 3303 9.449719 GTAGTCCATTTGAAATCTCTAAAAGGA 57.550 33.333 0.00 0.00 0.00 3.36
3129 3304 8.341892 AGTCCATTTGAAATCTCTAAAAGGAC 57.658 34.615 12.72 12.72 41.02 3.85
3130 3305 8.166726 AGTCCATTTGAAATCTCTAAAAGGACT 58.833 33.333 15.86 15.86 43.14 3.85
3131 3306 8.797438 GTCCATTTGAAATCTCTAAAAGGACTT 58.203 33.333 13.13 0.00 39.55 3.01
3147 3322 8.959705 AAAAGGACTTATATTTAGGAACGGAG 57.040 34.615 0.00 0.00 0.00 4.63
3148 3323 6.667558 AGGACTTATATTTAGGAACGGAGG 57.332 41.667 0.00 0.00 0.00 4.30
3149 3324 6.379579 AGGACTTATATTTAGGAACGGAGGA 58.620 40.000 0.00 0.00 0.00 3.71
3150 3325 6.842807 AGGACTTATATTTAGGAACGGAGGAA 59.157 38.462 0.00 0.00 0.00 3.36
3151 3326 7.015389 AGGACTTATATTTAGGAACGGAGGAAG 59.985 40.741 0.00 0.00 0.00 3.46
3152 3327 7.201983 GGACTTATATTTAGGAACGGAGGAAGT 60.202 40.741 0.00 0.00 0.00 3.01
3153 3328 8.773033 ACTTATATTTAGGAACGGAGGAAGTA 57.227 34.615 0.00 0.00 0.00 2.24
3451 3634 5.056894 AGAACATGAAAAGAATGCTCTGC 57.943 39.130 0.00 0.00 31.04 4.26
3555 3856 3.266772 TGCTGGATGTTTAGAGGTTCCAT 59.733 43.478 0.00 0.00 35.99 3.41
3648 3951 2.629137 TGAGGTGTTAGCGTGTCCTTTA 59.371 45.455 0.00 0.00 0.00 1.85
3689 3992 3.625764 GGCTCATGCAGTTATTCCGTTTA 59.374 43.478 0.00 0.00 41.91 2.01
3928 4231 1.723003 GCGAAGGCATTTGCTGAAAAG 59.277 47.619 15.97 0.00 41.85 2.27
4005 4308 4.081087 TCTGGTAGATAAGTTGACTTGGCC 60.081 45.833 6.64 0.00 37.40 5.36
4150 4453 1.677552 CTGGGCAGGTCGTAAAGGT 59.322 57.895 0.00 0.00 0.00 3.50
4243 4546 8.427902 AGATTTCATGCTAGTCATATACTCCA 57.572 34.615 0.00 0.00 39.80 3.86
4545 4849 8.316946 TCCTTTATATGTCTTGGAGATATGCTG 58.683 37.037 7.24 0.00 32.17 4.41
4622 4926 0.908198 AGAGCCAGAGGTTGTCATCC 59.092 55.000 0.00 0.00 0.00 3.51
4743 5178 9.331282 AGTCTATTTCTGGAGTAAAATGTATGC 57.669 33.333 0.00 0.00 0.00 3.14
4809 5244 1.473677 CATTCTTCTTGGAATGCGCCA 59.526 47.619 4.18 0.00 43.63 5.69
5056 5491 8.614469 TCTGTTTGTGTTTACATGTATCATCA 57.386 30.769 6.36 7.71 36.53 3.07
5063 5498 8.720562 TGTGTTTACATGTATCATCACTTTCAG 58.279 33.333 6.36 0.00 0.00 3.02
5109 5544 6.463360 GTTGTTTTCCCAATACAACATGGAT 58.537 36.000 14.21 0.00 46.67 3.41
5226 5775 3.021269 CACTTAGTGCGTGTAACTCCA 57.979 47.619 0.00 0.00 31.75 3.86
5241 5790 6.000840 TGTAACTCCACAAGTAATGCAATCA 58.999 36.000 0.00 0.00 37.17 2.57
5253 5802 7.337480 AGTAATGCAATCAATGTTAGATGCA 57.663 32.000 0.37 0.37 35.56 3.96
5360 5912 0.985760 TTGGGTATTGCCACCTACGT 59.014 50.000 0.00 0.00 38.73 3.57
5429 5981 5.440610 AGGGAGAATGAAATGTCATGGTAC 58.559 41.667 0.00 0.00 44.02 3.34
5514 6066 2.198906 TTACGTACTCCCGGTGCACG 62.199 60.000 11.45 13.62 43.80 5.34
5652 6206 9.274206 GTTACTCCAAAAACAAGAGACTAATCT 57.726 33.333 0.00 0.00 38.15 2.40
5855 6409 1.609072 GGTTTTCTGTCCTTGAGCACC 59.391 52.381 0.00 0.00 0.00 5.01
5948 6502 2.393764 GCCTGACCAAATTTGTTGACG 58.606 47.619 16.73 3.86 0.00 4.35
6032 6586 6.037610 CCATGAAAACTAGCTAGACATTGGTC 59.962 42.308 27.45 13.26 44.66 4.02
6143 6697 2.865670 GCACTTGACCAGAGACAGAGTG 60.866 54.545 0.00 0.00 33.98 3.51
6155 6709 2.697751 AGACAGAGTGATACCATGCTCC 59.302 50.000 0.00 0.00 0.00 4.70
6232 6786 1.885887 GCTGCCATACTGTTTGAACCA 59.114 47.619 0.00 0.00 0.00 3.67
6332 6886 2.872858 GGATTTGACTTCGCTATCCCAC 59.127 50.000 0.00 0.00 30.74 4.61
6333 6887 3.531538 GATTTGACTTCGCTATCCCACA 58.468 45.455 0.00 0.00 0.00 4.17
6355 6910 5.650703 ACAAACACAACTATATTACCAGGGC 59.349 40.000 0.00 0.00 0.00 5.19
6378 6933 6.150474 GGCTTTCAGGTTTATGTTAGCAAGTA 59.850 38.462 0.00 0.00 32.84 2.24
6379 6934 7.021790 GCTTTCAGGTTTATGTTAGCAAGTAC 58.978 38.462 0.00 0.00 32.09 2.73
6380 6935 7.094762 GCTTTCAGGTTTATGTTAGCAAGTACT 60.095 37.037 0.00 0.00 32.09 2.73
6381 6936 7.900782 TTCAGGTTTATGTTAGCAAGTACTC 57.099 36.000 0.00 0.00 0.00 2.59
6382 6937 6.403878 TCAGGTTTATGTTAGCAAGTACTCC 58.596 40.000 0.00 0.00 0.00 3.85
6383 6938 5.585047 CAGGTTTATGTTAGCAAGTACTCCC 59.415 44.000 0.00 0.00 0.00 4.30
6384 6939 5.487845 AGGTTTATGTTAGCAAGTACTCCCT 59.512 40.000 0.00 0.00 0.00 4.20
6385 6940 5.816258 GGTTTATGTTAGCAAGTACTCCCTC 59.184 44.000 0.00 0.00 0.00 4.30
6386 6941 5.609533 TTATGTTAGCAAGTACTCCCTCC 57.390 43.478 0.00 0.00 0.00 4.30
6387 6942 2.897350 TGTTAGCAAGTACTCCCTCCA 58.103 47.619 0.00 0.00 0.00 3.86
6388 6943 3.450904 TGTTAGCAAGTACTCCCTCCAT 58.549 45.455 0.00 0.00 0.00 3.41
6389 6944 3.451178 TGTTAGCAAGTACTCCCTCCATC 59.549 47.826 0.00 0.00 0.00 3.51
6390 6945 1.501582 AGCAAGTACTCCCTCCATCC 58.498 55.000 0.00 0.00 0.00 3.51
6391 6946 0.470341 GCAAGTACTCCCTCCATCCC 59.530 60.000 0.00 0.00 0.00 3.85
6392 6947 1.879575 CAAGTACTCCCTCCATCCCA 58.120 55.000 0.00 0.00 0.00 4.37
6393 6948 2.196595 CAAGTACTCCCTCCATCCCAA 58.803 52.381 0.00 0.00 0.00 4.12
6394 6949 2.576191 CAAGTACTCCCTCCATCCCAAA 59.424 50.000 0.00 0.00 0.00 3.28
6395 6950 2.929301 AGTACTCCCTCCATCCCAAAA 58.071 47.619 0.00 0.00 0.00 2.44
6396 6951 3.474920 AGTACTCCCTCCATCCCAAAAT 58.525 45.455 0.00 0.00 0.00 1.82
6397 6952 4.641868 AGTACTCCCTCCATCCCAAAATA 58.358 43.478 0.00 0.00 0.00 1.40
6398 6953 5.235534 AGTACTCCCTCCATCCCAAAATAT 58.764 41.667 0.00 0.00 0.00 1.28
6399 6954 6.399013 AGTACTCCCTCCATCCCAAAATATA 58.601 40.000 0.00 0.00 0.00 0.86
6400 6955 6.855061 AGTACTCCCTCCATCCCAAAATATAA 59.145 38.462 0.00 0.00 0.00 0.98
6401 6956 6.803587 ACTCCCTCCATCCCAAAATATAAT 57.196 37.500 0.00 0.00 0.00 1.28
6402 6957 7.905144 ACTCCCTCCATCCCAAAATATAATA 57.095 36.000 0.00 0.00 0.00 0.98
6403 6958 7.699878 ACTCCCTCCATCCCAAAATATAATAC 58.300 38.462 0.00 0.00 0.00 1.89
6404 6959 7.521115 ACTCCCTCCATCCCAAAATATAATACT 59.479 37.037 0.00 0.00 0.00 2.12
6405 6960 7.928873 TCCCTCCATCCCAAAATATAATACTC 58.071 38.462 0.00 0.00 0.00 2.59
6406 6961 7.036863 TCCCTCCATCCCAAAATATAATACTCC 60.037 40.741 0.00 0.00 0.00 3.85
6407 6962 7.119387 CCTCCATCCCAAAATATAATACTCCC 58.881 42.308 0.00 0.00 0.00 4.30
6408 6963 7.036571 CCTCCATCCCAAAATATAATACTCCCT 60.037 40.741 0.00 0.00 0.00 4.20
6409 6964 7.928873 TCCATCCCAAAATATAATACTCCCTC 58.071 38.462 0.00 0.00 0.00 4.30
6410 6965 7.744068 TCCATCCCAAAATATAATACTCCCTCT 59.256 37.037 0.00 0.00 0.00 3.69
6411 6966 7.831193 CCATCCCAAAATATAATACTCCCTCTG 59.169 40.741 0.00 0.00 0.00 3.35
6412 6967 7.947782 TCCCAAAATATAATACTCCCTCTGT 57.052 36.000 0.00 0.00 0.00 3.41
6413 6968 8.344939 TCCCAAAATATAATACTCCCTCTGTT 57.655 34.615 0.00 0.00 0.00 3.16
6414 6969 8.437575 TCCCAAAATATAATACTCCCTCTGTTC 58.562 37.037 0.00 0.00 0.00 3.18
6415 6970 8.217799 CCCAAAATATAATACTCCCTCTGTTCA 58.782 37.037 0.00 0.00 0.00 3.18
6416 6971 9.799106 CCAAAATATAATACTCCCTCTGTTCAT 57.201 33.333 0.00 0.00 0.00 2.57
6424 6979 8.934023 AATACTCCCTCTGTTCATTTTTGTAA 57.066 30.769 0.00 0.00 0.00 2.41
6425 6980 6.884280 ACTCCCTCTGTTCATTTTTGTAAG 57.116 37.500 0.00 0.00 0.00 2.34
6426 6981 6.601332 ACTCCCTCTGTTCATTTTTGTAAGA 58.399 36.000 0.00 0.00 0.00 2.10
6427 6982 6.486993 ACTCCCTCTGTTCATTTTTGTAAGAC 59.513 38.462 0.00 0.00 0.00 3.01
6428 6983 5.468746 TCCCTCTGTTCATTTTTGTAAGACG 59.531 40.000 0.00 0.00 0.00 4.18
6429 6984 5.238650 CCCTCTGTTCATTTTTGTAAGACGT 59.761 40.000 0.00 0.00 0.00 4.34
6430 6985 6.238648 CCCTCTGTTCATTTTTGTAAGACGTT 60.239 38.462 0.00 0.00 0.00 3.99
6431 6986 7.193595 CCTCTGTTCATTTTTGTAAGACGTTT 58.806 34.615 0.00 0.00 0.00 3.60
6432 6987 7.700656 CCTCTGTTCATTTTTGTAAGACGTTTT 59.299 33.333 0.00 0.00 0.00 2.43
6433 6988 9.710979 CTCTGTTCATTTTTGTAAGACGTTTTA 57.289 29.630 0.00 0.00 0.00 1.52
6434 6989 9.710979 TCTGTTCATTTTTGTAAGACGTTTTAG 57.289 29.630 0.00 0.00 0.00 1.85
6435 6990 9.710979 CTGTTCATTTTTGTAAGACGTTTTAGA 57.289 29.630 0.00 0.00 0.00 2.10
6436 6991 9.493206 TGTTCATTTTTGTAAGACGTTTTAGAC 57.507 29.630 0.00 0.00 0.00 2.59
6437 6992 9.493206 GTTCATTTTTGTAAGACGTTTTAGACA 57.507 29.630 0.00 0.00 0.00 3.41
6446 7001 9.531942 TGTAAGACGTTTTAGACATTTAAGACA 57.468 29.630 0.00 0.00 0.00 3.41
6449 7004 8.428186 AGACGTTTTAGACATTTAAGACAACA 57.572 30.769 0.00 0.00 0.00 3.33
6450 7005 9.052759 AGACGTTTTAGACATTTAAGACAACAT 57.947 29.630 0.00 0.00 0.00 2.71
6451 7006 9.314501 GACGTTTTAGACATTTAAGACAACATC 57.685 33.333 0.00 0.00 0.00 3.06
6452 7007 9.052759 ACGTTTTAGACATTTAAGACAACATCT 57.947 29.630 0.00 0.00 40.46 2.90
6482 7037 9.899226 ATAGTTCAATTTTCAGCTGTCTTAAAC 57.101 29.630 14.67 10.52 0.00 2.01
6483 7038 7.771183 AGTTCAATTTTCAGCTGTCTTAAACA 58.229 30.769 14.67 0.00 36.18 2.83
6484 7039 8.250332 AGTTCAATTTTCAGCTGTCTTAAACAA 58.750 29.630 14.67 0.00 37.45 2.83
6485 7040 7.985634 TCAATTTTCAGCTGTCTTAAACAAC 57.014 32.000 14.67 0.00 37.45 3.32
6486 7041 7.771183 TCAATTTTCAGCTGTCTTAAACAACT 58.229 30.769 14.67 0.00 37.45 3.16
6487 7042 8.250332 TCAATTTTCAGCTGTCTTAAACAACTT 58.750 29.630 14.67 0.22 37.45 2.66
6488 7043 9.515020 CAATTTTCAGCTGTCTTAAACAACTTA 57.485 29.630 14.67 0.00 37.45 2.24
6489 7044 9.516314 AATTTTCAGCTGTCTTAAACAACTTAC 57.484 29.630 14.67 0.00 37.45 2.34
6490 7045 7.618502 TTTCAGCTGTCTTAAACAACTTACA 57.381 32.000 14.67 0.00 37.45 2.41
6491 7046 7.618502 TTCAGCTGTCTTAAACAACTTACAA 57.381 32.000 14.67 0.00 37.45 2.41
6492 7047 7.618502 TCAGCTGTCTTAAACAACTTACAAA 57.381 32.000 14.67 0.00 37.45 2.83
6493 7048 8.046294 TCAGCTGTCTTAAACAACTTACAAAA 57.954 30.769 14.67 0.00 37.45 2.44
6494 7049 8.181573 TCAGCTGTCTTAAACAACTTACAAAAG 58.818 33.333 14.67 0.00 37.45 2.27
6496 7051 7.968405 AGCTGTCTTAAACAACTTACAAAAGTG 59.032 33.333 0.00 0.00 45.37 3.16
6497 7052 7.966204 GCTGTCTTAAACAACTTACAAAAGTGA 59.034 33.333 0.00 0.00 45.37 3.41
6498 7053 9.834628 CTGTCTTAAACAACTTACAAAAGTGAA 57.165 29.630 0.00 0.00 45.37 3.18
6499 7054 9.615295 TGTCTTAAACAACTTACAAAAGTGAAC 57.385 29.630 0.00 0.00 45.37 3.18
6500 7055 8.782327 GTCTTAAACAACTTACAAAAGTGAACG 58.218 33.333 0.00 0.00 45.37 3.95
6501 7056 7.964011 TCTTAAACAACTTACAAAAGTGAACGG 59.036 33.333 0.00 0.00 45.37 4.44
6502 7057 5.883503 AACAACTTACAAAAGTGAACGGA 57.116 34.783 0.00 0.00 45.37 4.69
6503 7058 5.479716 ACAACTTACAAAAGTGAACGGAG 57.520 39.130 0.00 0.00 45.37 4.63
6504 7059 4.334481 ACAACTTACAAAAGTGAACGGAGG 59.666 41.667 0.00 0.00 45.37 4.30
6505 7060 3.473625 ACTTACAAAAGTGAACGGAGGG 58.526 45.455 0.00 0.00 44.40 4.30
6506 7061 3.135167 ACTTACAAAAGTGAACGGAGGGA 59.865 43.478 0.00 0.00 44.40 4.20
6507 7062 2.256117 ACAAAAGTGAACGGAGGGAG 57.744 50.000 0.00 0.00 0.00 4.30
6508 7063 1.489230 ACAAAAGTGAACGGAGGGAGT 59.511 47.619 0.00 0.00 0.00 3.85
6509 7064 2.701951 ACAAAAGTGAACGGAGGGAGTA 59.298 45.455 0.00 0.00 0.00 2.59
6510 7065 3.326880 ACAAAAGTGAACGGAGGGAGTAT 59.673 43.478 0.00 0.00 0.00 2.12
6511 7066 3.889520 AAAGTGAACGGAGGGAGTATC 57.110 47.619 0.00 0.00 0.00 2.24
6512 7067 2.526888 AGTGAACGGAGGGAGTATCA 57.473 50.000 0.00 0.00 36.25 2.15
6513 7068 3.033659 AGTGAACGGAGGGAGTATCAT 57.966 47.619 0.00 0.00 36.25 2.45
6514 7069 3.375699 AGTGAACGGAGGGAGTATCATT 58.624 45.455 0.00 0.00 36.25 2.57
6515 7070 3.775316 AGTGAACGGAGGGAGTATCATTT 59.225 43.478 0.00 0.00 36.25 2.32
6516 7071 4.225267 AGTGAACGGAGGGAGTATCATTTT 59.775 41.667 0.00 0.00 36.25 1.82
6517 7072 4.941873 GTGAACGGAGGGAGTATCATTTTT 59.058 41.667 0.00 0.00 36.25 1.94
6518 7073 4.941263 TGAACGGAGGGAGTATCATTTTTG 59.059 41.667 0.00 0.00 36.25 2.44
6519 7074 4.837093 ACGGAGGGAGTATCATTTTTGA 57.163 40.909 0.00 0.00 36.25 2.69
6520 7075 4.514401 ACGGAGGGAGTATCATTTTTGAC 58.486 43.478 0.00 0.00 36.25 3.18
6521 7076 4.019681 ACGGAGGGAGTATCATTTTTGACA 60.020 41.667 0.00 0.00 36.25 3.58
6522 7077 4.332819 CGGAGGGAGTATCATTTTTGACAC 59.667 45.833 0.00 0.00 36.25 3.67
6523 7078 5.501156 GGAGGGAGTATCATTTTTGACACT 58.499 41.667 0.00 0.00 36.25 3.55
6524 7079 5.946377 GGAGGGAGTATCATTTTTGACACTT 59.054 40.000 0.00 0.00 36.25 3.16
6525 7080 7.110155 GGAGGGAGTATCATTTTTGACACTTA 58.890 38.462 0.00 0.00 36.25 2.24
6526 7081 7.775561 GGAGGGAGTATCATTTTTGACACTTAT 59.224 37.037 0.00 0.00 36.25 1.73
6527 7082 9.832445 GAGGGAGTATCATTTTTGACACTTATA 57.168 33.333 0.00 0.00 36.25 0.98
6535 7090 8.770438 TCATTTTTGACACTTATATTTTGGGC 57.230 30.769 0.00 0.00 0.00 5.36
6536 7091 7.821846 TCATTTTTGACACTTATATTTTGGGCC 59.178 33.333 0.00 0.00 0.00 5.80
6537 7092 6.672266 TTTTGACACTTATATTTTGGGCCA 57.328 33.333 0.00 0.00 0.00 5.36
6538 7093 5.913137 TTGACACTTATATTTTGGGCCAG 57.087 39.130 6.23 0.00 0.00 4.85
6539 7094 5.186256 TGACACTTATATTTTGGGCCAGA 57.814 39.130 6.23 0.00 0.00 3.86
6540 7095 5.192927 TGACACTTATATTTTGGGCCAGAG 58.807 41.667 6.23 0.35 0.00 3.35
6541 7096 4.536765 ACACTTATATTTTGGGCCAGAGG 58.463 43.478 6.23 0.00 0.00 3.69
6542 7097 3.891366 CACTTATATTTTGGGCCAGAGGG 59.109 47.826 6.23 0.00 37.18 4.30
6543 7098 3.791545 ACTTATATTTTGGGCCAGAGGGA 59.208 43.478 6.23 0.00 35.59 4.20
6544 7099 4.141158 ACTTATATTTTGGGCCAGAGGGAG 60.141 45.833 6.23 3.23 35.59 4.30
6545 7100 1.681229 TATTTTGGGCCAGAGGGAGT 58.319 50.000 6.23 0.00 35.59 3.85
6546 7101 1.681229 ATTTTGGGCCAGAGGGAGTA 58.319 50.000 6.23 0.00 35.59 2.59
6547 7102 0.991920 TTTTGGGCCAGAGGGAGTAG 59.008 55.000 6.23 0.00 35.59 2.57
6572 7127 9.173021 AGGTTATATGATTCTCTAGAGTCATCG 57.827 37.037 22.55 0.00 44.74 3.84
6589 7145 3.871006 TCATCGCATACAAGTGAATCACC 59.129 43.478 10.12 0.00 34.49 4.02
6594 7150 5.935206 TCGCATACAAGTGAATCACCTAAAA 59.065 36.000 10.12 0.00 34.49 1.52
6646 7202 0.884514 GGCCAGTTTGGAAGAAGAGC 59.115 55.000 0.00 0.00 40.96 4.09
6650 7206 3.376546 GCCAGTTTGGAAGAAGAGCATAG 59.623 47.826 0.00 0.00 40.96 2.23
6655 7221 5.409826 AGTTTGGAAGAAGAGCATAGTTTCG 59.590 40.000 0.00 0.00 0.00 3.46
6656 7222 4.801330 TGGAAGAAGAGCATAGTTTCGA 57.199 40.909 0.00 0.00 0.00 3.71
6659 7225 6.273825 TGGAAGAAGAGCATAGTTTCGATAC 58.726 40.000 0.00 0.00 0.00 2.24
6775 7341 9.899661 ACTAAATATTTACATGTTACTCCTGCA 57.100 29.630 2.30 0.00 0.00 4.41
6777 7343 8.574251 AAATATTTACATGTTACTCCTGCACA 57.426 30.769 2.30 0.00 0.00 4.57
6778 7344 8.752005 AATATTTACATGTTACTCCTGCACAT 57.248 30.769 2.30 0.00 0.00 3.21
6779 7345 9.845740 AATATTTACATGTTACTCCTGCACATA 57.154 29.630 2.30 0.00 29.78 2.29
6780 7346 7.792374 ATTTACATGTTACTCCTGCACATAG 57.208 36.000 2.30 0.00 29.78 2.23
6781 7347 4.142609 ACATGTTACTCCTGCACATAGG 57.857 45.455 0.00 0.00 39.29 2.57
6784 7350 3.937814 TGTTACTCCTGCACATAGGTTG 58.062 45.455 0.00 0.00 38.99 3.77
6785 7351 3.270877 GTTACTCCTGCACATAGGTTGG 58.729 50.000 0.00 0.00 38.99 3.77
6787 7353 1.279271 ACTCCTGCACATAGGTTGGAC 59.721 52.381 0.00 0.00 38.99 4.02
6788 7354 1.278985 CTCCTGCACATAGGTTGGACA 59.721 52.381 0.00 0.00 38.99 4.02
6790 7356 1.679944 CCTGCACATAGGTTGGACAGG 60.680 57.143 0.00 0.00 42.56 4.00
6792 7358 0.328258 GCACATAGGTTGGACAGGGT 59.672 55.000 0.00 0.00 0.00 4.34
6793 7359 1.679032 GCACATAGGTTGGACAGGGTC 60.679 57.143 0.00 0.00 0.00 4.46
6796 7362 2.187958 CATAGGTTGGACAGGGTCTGA 58.812 52.381 1.59 0.00 35.18 3.27
6797 7363 1.938585 TAGGTTGGACAGGGTCTGAG 58.061 55.000 1.59 0.00 35.18 3.35
6799 7365 0.765510 GGTTGGACAGGGTCTGAGTT 59.234 55.000 1.59 0.00 35.18 3.01
6813 7388 9.535878 CAGGGTCTGAGTTCTTAATTATAGTTC 57.464 37.037 0.00 0.00 32.44 3.01
6833 7408 4.191033 TCGTTTACCCTGCTTCGAAATA 57.809 40.909 0.00 0.00 0.00 1.40
6873 7448 7.591426 GTCTTTTCATTCATGGAACTAACACAC 59.409 37.037 0.00 0.00 0.00 3.82
6874 7449 6.951062 TTTCATTCATGGAACTAACACACA 57.049 33.333 0.00 0.00 0.00 3.72
6875 7450 5.940192 TCATTCATGGAACTAACACACAC 57.060 39.130 0.00 0.00 0.00 3.82
6876 7451 4.450757 TCATTCATGGAACTAACACACACG 59.549 41.667 0.00 0.00 0.00 4.49
6944 7641 5.221244 GGTTGTATTTACAGGATGGATTGGC 60.221 44.000 0.00 0.00 43.62 4.52
6954 7651 4.999950 CAGGATGGATTGGCTGTTATACTC 59.000 45.833 0.00 0.00 0.00 2.59
6996 7694 1.832883 TCATGCAGCCCAAAACGTAT 58.167 45.000 0.00 0.00 0.00 3.06
7097 7796 9.358872 GAGATTTTCATAAGATGTTGTTTTCCC 57.641 33.333 0.00 0.00 0.00 3.97
7166 7865 5.627182 ATGAGCTAGAACATGTCTCCATT 57.373 39.130 0.00 0.00 37.84 3.16
7200 7899 1.678360 CACGCATTGCAACTGAACTC 58.322 50.000 0.00 0.00 0.00 3.01
7273 8005 3.571401 CCTTCACACAGAATTTCTTGGCT 59.429 43.478 0.00 0.00 35.25 4.75
7274 8006 4.761739 CCTTCACACAGAATTTCTTGGCTA 59.238 41.667 0.00 0.00 35.25 3.93
7275 8007 5.335191 CCTTCACACAGAATTTCTTGGCTAC 60.335 44.000 0.00 0.00 35.25 3.58
7276 8008 4.973168 TCACACAGAATTTCTTGGCTACT 58.027 39.130 0.00 0.00 0.00 2.57
7277 8009 6.109156 TCACACAGAATTTCTTGGCTACTA 57.891 37.500 0.00 0.00 0.00 1.82
7278 8010 6.530120 TCACACAGAATTTCTTGGCTACTAA 58.470 36.000 0.00 0.00 0.00 2.24
7319 8082 1.898574 CACGCAAAGAAGGCCAGGT 60.899 57.895 5.01 0.00 0.00 4.00
7429 8193 4.017808 ACGGAGTACAAGAAGCTCACTAT 58.982 43.478 0.00 0.00 41.94 2.12
7441 8205 5.244851 AGAAGCTCACTATCTCAGAACACAA 59.755 40.000 0.00 0.00 0.00 3.33
7673 8437 0.234625 TTAGTTTCGCACGCTGCTTG 59.765 50.000 1.22 1.22 42.25 4.01
8246 9019 1.610873 GACGTCCCTCTCCTCCTCT 59.389 63.158 3.51 0.00 0.00 3.69
8249 9022 1.098712 CGTCCCTCTCCTCCTCTTCG 61.099 65.000 0.00 0.00 0.00 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 8.730680 TGTTATTCAATGGAGAAAAGCTAGAAC 58.269 33.333 0.00 0.00 0.00 3.01
6 7 6.945435 TGGTGTTATTCAATGGAGAAAAGCTA 59.055 34.615 0.00 0.00 0.00 3.32
7 8 5.774690 TGGTGTTATTCAATGGAGAAAAGCT 59.225 36.000 0.00 0.00 0.00 3.74
8 9 6.024552 TGGTGTTATTCAATGGAGAAAAGC 57.975 37.500 0.00 0.00 0.00 3.51
9 10 7.039784 TCCTTGGTGTTATTCAATGGAGAAAAG 60.040 37.037 0.00 0.00 0.00 2.27
10 11 6.780031 TCCTTGGTGTTATTCAATGGAGAAAA 59.220 34.615 0.00 0.00 0.00 2.29
11 12 6.310941 TCCTTGGTGTTATTCAATGGAGAAA 58.689 36.000 0.00 0.00 0.00 2.52
12 13 5.886609 TCCTTGGTGTTATTCAATGGAGAA 58.113 37.500 0.00 0.00 0.00 2.87
13 14 5.512942 TCCTTGGTGTTATTCAATGGAGA 57.487 39.130 0.00 0.00 0.00 3.71
14 15 5.711976 ACTTCCTTGGTGTTATTCAATGGAG 59.288 40.000 0.00 0.00 0.00 3.86
21 22 5.240121 TCGGTTACTTCCTTGGTGTTATTC 58.760 41.667 0.00 0.00 0.00 1.75
27 28 4.069304 TCAAATCGGTTACTTCCTTGGTG 58.931 43.478 0.00 0.00 0.00 4.17
30 31 4.069304 TGGTCAAATCGGTTACTTCCTTG 58.931 43.478 0.00 0.00 0.00 3.61
31 32 4.360951 TGGTCAAATCGGTTACTTCCTT 57.639 40.909 0.00 0.00 0.00 3.36
34 35 6.103997 TGAGTATGGTCAAATCGGTTACTTC 58.896 40.000 0.00 0.00 0.00 3.01
36 37 5.670792 TGAGTATGGTCAAATCGGTTACT 57.329 39.130 0.00 0.00 0.00 2.24
38 39 6.046593 GTGATGAGTATGGTCAAATCGGTTA 58.953 40.000 0.00 0.00 0.00 2.85
39 40 4.876107 GTGATGAGTATGGTCAAATCGGTT 59.124 41.667 0.00 0.00 0.00 4.44
42 43 5.111989 ACAGTGATGAGTATGGTCAAATCG 58.888 41.667 0.00 0.00 0.00 3.34
45 46 5.237815 GTGACAGTGATGAGTATGGTCAAA 58.762 41.667 0.00 0.00 35.79 2.69
46 47 4.322725 GGTGACAGTGATGAGTATGGTCAA 60.323 45.833 0.00 0.00 35.79 3.18
60 61 2.281761 GCCTGGGTGGTGACAGTG 60.282 66.667 0.00 0.00 44.46 3.66
77 78 2.535574 GAGAAACTTGGTTTTGCGCAAG 59.464 45.455 23.68 13.03 35.77 4.01
81 82 2.861462 TGGAGAAACTTGGTTTTGCG 57.139 45.000 0.00 0.00 35.77 4.85
111 112 3.370527 GCAGGCTTGAGTGGTCCTATTTA 60.371 47.826 0.00 0.00 0.00 1.40
113 114 1.065126 GCAGGCTTGAGTGGTCCTATT 60.065 52.381 0.00 0.00 0.00 1.73
133 134 7.698506 AACTTGATATGATGAAGGCATATGG 57.301 36.000 4.56 0.00 38.64 2.74
218 220 6.683974 ATTACTGACAACATTATCTGTGCC 57.316 37.500 0.00 0.00 38.39 5.01
248 250 1.067635 CAATCAGCTTTTGTTCCCGGG 60.068 52.381 16.85 16.85 0.00 5.73
289 291 6.153340 TGCAAATAGGCTCAAGCTAATTCTTT 59.847 34.615 1.46 0.00 41.70 2.52
369 371 5.428253 TCTAATTCCAACCCATCTTTCTCG 58.572 41.667 0.00 0.00 0.00 4.04
387 390 4.263905 TGTGCTCATCCCAAAGGTTCTAAT 60.264 41.667 0.00 0.00 0.00 1.73
565 568 6.242508 ACGAGGAAATAAAAACAGCTCTTC 57.757 37.500 0.00 0.00 0.00 2.87
580 583 3.499338 TCACCCTACACTAACGAGGAAA 58.501 45.455 0.00 0.00 31.45 3.13
638 641 2.223829 CCAAGTCCTATCTACTGTGCCG 60.224 54.545 0.00 0.00 0.00 5.69
668 671 2.674796 ATACTTTCGAGGGTGCAGTC 57.325 50.000 0.00 0.00 0.00 3.51
672 675 3.258622 AGCCTATATACTTTCGAGGGTGC 59.741 47.826 3.17 0.00 36.67 5.01
741 744 5.927030 TGCAAATTTCTTAGACGTCATCAC 58.073 37.500 19.50 0.00 0.00 3.06
779 782 2.508526 AGCCAAAGACGCAAGAGAAAT 58.491 42.857 0.00 0.00 43.62 2.17
829 832 1.831580 ATGGCTTTCAGCAAGAGACC 58.168 50.000 0.00 0.00 44.75 3.85
835 838 2.030893 CGACTTGAATGGCTTTCAGCAA 60.031 45.455 14.45 1.71 44.90 3.91
1026 1031 1.341156 AAAGGAGAGATGCGGGGGAG 61.341 60.000 0.00 0.00 0.00 4.30
1027 1032 1.306997 AAAGGAGAGATGCGGGGGA 60.307 57.895 0.00 0.00 0.00 4.81
1028 1033 1.147153 GAAAGGAGAGATGCGGGGG 59.853 63.158 0.00 0.00 0.00 5.40
1302 1309 1.129917 AGATGCCCACAGAGATCCAG 58.870 55.000 0.00 0.00 0.00 3.86
1310 1317 2.489329 ACATTTCGAAAGATGCCCACAG 59.511 45.455 16.80 0.00 41.60 3.66
1460 1467 1.988107 ACACATTCCTCCTCACCACAT 59.012 47.619 0.00 0.00 0.00 3.21
1551 1558 2.490718 CCCCCAAGATGGTCAAACTCAA 60.491 50.000 0.00 0.00 35.17 3.02
1552 1559 1.075374 CCCCCAAGATGGTCAAACTCA 59.925 52.381 0.00 0.00 35.17 3.41
1553 1560 1.354368 TCCCCCAAGATGGTCAAACTC 59.646 52.381 0.00 0.00 35.17 3.01
1554 1561 1.455822 TCCCCCAAGATGGTCAAACT 58.544 50.000 0.00 0.00 35.17 2.66
1555 1562 2.532250 ATCCCCCAAGATGGTCAAAC 57.468 50.000 0.00 0.00 35.17 2.93
1556 1563 2.620367 CGAATCCCCCAAGATGGTCAAA 60.620 50.000 0.00 0.00 35.17 2.69
1589 1596 8.370182 CCCATTTTTCATTTTCCCAGATATAGG 58.630 37.037 0.00 0.00 0.00 2.57
1590 1597 8.927411 ACCCATTTTTCATTTTCCCAGATATAG 58.073 33.333 0.00 0.00 0.00 1.31
1631 1638 0.411452 TGCCCTTGACCTCTCTCTCT 59.589 55.000 0.00 0.00 0.00 3.10
1632 1639 0.823460 CTGCCCTTGACCTCTCTCTC 59.177 60.000 0.00 0.00 0.00 3.20
1633 1640 1.264045 GCTGCCCTTGACCTCTCTCT 61.264 60.000 0.00 0.00 0.00 3.10
1634 1641 1.220477 GCTGCCCTTGACCTCTCTC 59.780 63.158 0.00 0.00 0.00 3.20
1635 1642 1.130054 TTGCTGCCCTTGACCTCTCT 61.130 55.000 0.00 0.00 0.00 3.10
1636 1643 0.034670 ATTGCTGCCCTTGACCTCTC 60.035 55.000 0.00 0.00 0.00 3.20
1688 1695 4.142381 GGCAGAATACAAAGCAAACTAGGG 60.142 45.833 0.00 0.00 0.00 3.53
1784 1791 3.304659 CCAAAACTGTCAACTCCCATTCG 60.305 47.826 0.00 0.00 0.00 3.34
1824 1831 1.458398 CCATCATACCGCAAACACCA 58.542 50.000 0.00 0.00 0.00 4.17
1849 1856 9.216117 TCCTTCTGAAAGTTTTATAACTAGCAC 57.784 33.333 0.00 0.00 43.74 4.40
1970 1978 4.904853 TGACCTTTAGAAAAGGGGCAAAAT 59.095 37.500 19.73 0.29 46.39 1.82
1982 1991 6.271391 TCACAAGGATAAGGTGACCTTTAGAA 59.729 38.462 23.55 4.38 41.69 2.10
1985 1994 6.214615 TGATCACAAGGATAAGGTGACCTTTA 59.785 38.462 23.55 8.95 44.25 1.85
1988 1997 4.104086 TGATCACAAGGATAAGGTGACCT 58.896 43.478 0.00 0.00 43.58 3.85
2305 2315 7.549134 CCTCATGTGAGTGCTAGTTTGTTATTA 59.451 37.037 9.03 0.00 40.48 0.98
2408 2418 6.910536 ATAAGAACATTCGGAAGTTAGCTG 57.089 37.500 0.00 0.00 0.00 4.24
2452 2462 6.929606 AGCTAAGATTATAGTAACCCAAAGCG 59.070 38.462 0.00 0.00 0.00 4.68
2715 2890 3.803778 CCAAAAGTGAGGTGATTGCAAAC 59.196 43.478 1.71 0.04 0.00 2.93
2839 3014 2.294074 AGGCGTTAGTTCAAAACTGCA 58.706 42.857 2.65 0.00 42.84 4.41
2892 3067 8.519799 TCAATTCTTCATAAACATTACTCCCC 57.480 34.615 0.00 0.00 0.00 4.81
2991 3166 4.102681 ACCAATATTTAGGAACGGAGGGAG 59.897 45.833 0.00 0.00 0.00 4.30
2992 3167 4.042174 ACCAATATTTAGGAACGGAGGGA 58.958 43.478 0.00 0.00 0.00 4.20
2993 3168 4.102681 AGACCAATATTTAGGAACGGAGGG 59.897 45.833 0.00 0.00 0.00 4.30
2994 3169 5.291905 AGACCAATATTTAGGAACGGAGG 57.708 43.478 0.00 0.00 0.00 4.30
2995 3170 7.048512 AGAAAGACCAATATTTAGGAACGGAG 58.951 38.462 0.00 0.00 0.00 4.63
2996 3171 6.954232 AGAAAGACCAATATTTAGGAACGGA 58.046 36.000 0.00 0.00 0.00 4.69
2997 3172 8.202137 TCTAGAAAGACCAATATTTAGGAACGG 58.798 37.037 0.00 0.00 0.00 4.44
2998 3173 9.250624 CTCTAGAAAGACCAATATTTAGGAACG 57.749 37.037 0.00 0.00 0.00 3.95
3008 3183 9.658799 CTGTTGAAATCTCTAGAAAGACCAATA 57.341 33.333 0.00 0.00 0.00 1.90
3009 3184 7.609532 CCTGTTGAAATCTCTAGAAAGACCAAT 59.390 37.037 0.00 0.00 0.00 3.16
3010 3185 6.936900 CCTGTTGAAATCTCTAGAAAGACCAA 59.063 38.462 0.00 0.00 0.00 3.67
3011 3186 6.043243 ACCTGTTGAAATCTCTAGAAAGACCA 59.957 38.462 0.00 0.00 0.00 4.02
3012 3187 6.370166 CACCTGTTGAAATCTCTAGAAAGACC 59.630 42.308 0.00 0.00 0.00 3.85
3013 3188 7.117092 GTCACCTGTTGAAATCTCTAGAAAGAC 59.883 40.741 0.00 0.00 35.39 3.01
3014 3189 7.015682 AGTCACCTGTTGAAATCTCTAGAAAGA 59.984 37.037 0.00 0.00 35.39 2.52
3015 3190 7.158021 AGTCACCTGTTGAAATCTCTAGAAAG 58.842 38.462 0.00 0.00 35.39 2.62
3016 3191 7.067496 AGTCACCTGTTGAAATCTCTAGAAA 57.933 36.000 0.00 0.00 35.39 2.52
3017 3192 6.672266 AGTCACCTGTTGAAATCTCTAGAA 57.328 37.500 0.00 0.00 35.39 2.10
3018 3193 6.719829 TGTAGTCACCTGTTGAAATCTCTAGA 59.280 38.462 0.00 0.00 35.39 2.43
3019 3194 6.925211 TGTAGTCACCTGTTGAAATCTCTAG 58.075 40.000 0.00 0.00 35.39 2.43
3020 3195 6.911250 TGTAGTCACCTGTTGAAATCTCTA 57.089 37.500 0.00 0.00 35.39 2.43
3021 3196 5.808366 TGTAGTCACCTGTTGAAATCTCT 57.192 39.130 0.00 0.00 35.39 3.10
3022 3197 6.253727 CGTATGTAGTCACCTGTTGAAATCTC 59.746 42.308 0.00 0.00 35.39 2.75
3023 3198 6.071560 TCGTATGTAGTCACCTGTTGAAATCT 60.072 38.462 0.00 0.00 35.39 2.40
3024 3199 6.097356 TCGTATGTAGTCACCTGTTGAAATC 58.903 40.000 0.00 0.00 35.39 2.17
3025 3200 6.032956 TCGTATGTAGTCACCTGTTGAAAT 57.967 37.500 0.00 0.00 35.39 2.17
3026 3201 5.456548 TCGTATGTAGTCACCTGTTGAAA 57.543 39.130 0.00 0.00 35.39 2.69
3027 3202 5.456548 TTCGTATGTAGTCACCTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
3028 3203 4.617530 GCTTCGTATGTAGTCACCTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
3029 3204 3.612860 GCTTCGTATGTAGTCACCTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
3030 3205 3.257375 TGCTTCGTATGTAGTCACCTGTT 59.743 43.478 0.00 0.00 0.00 3.16
3031 3206 2.823747 TGCTTCGTATGTAGTCACCTGT 59.176 45.455 0.00 0.00 0.00 4.00
3032 3207 3.503827 TGCTTCGTATGTAGTCACCTG 57.496 47.619 0.00 0.00 0.00 4.00
3033 3208 4.530710 TTTGCTTCGTATGTAGTCACCT 57.469 40.909 0.00 0.00 0.00 4.00
3034 3209 5.350365 TCATTTTGCTTCGTATGTAGTCACC 59.650 40.000 0.00 0.00 0.00 4.02
3035 3210 6.403333 TCATTTTGCTTCGTATGTAGTCAC 57.597 37.500 0.00 0.00 0.00 3.67
3036 3211 7.333174 TCATTCATTTTGCTTCGTATGTAGTCA 59.667 33.333 0.00 0.00 0.00 3.41
3037 3212 7.684670 TCATTCATTTTGCTTCGTATGTAGTC 58.315 34.615 0.00 0.00 0.00 2.59
3038 3213 7.609760 TCATTCATTTTGCTTCGTATGTAGT 57.390 32.000 0.00 0.00 0.00 2.73
3039 3214 9.162793 GATTCATTCATTTTGCTTCGTATGTAG 57.837 33.333 0.00 0.00 0.00 2.74
3040 3215 8.892723 AGATTCATTCATTTTGCTTCGTATGTA 58.107 29.630 0.00 0.00 0.00 2.29
3041 3216 7.765307 AGATTCATTCATTTTGCTTCGTATGT 58.235 30.769 0.00 0.00 0.00 2.29
3042 3217 9.888878 ATAGATTCATTCATTTTGCTTCGTATG 57.111 29.630 0.00 0.00 0.00 2.39
3043 3218 9.888878 CATAGATTCATTCATTTTGCTTCGTAT 57.111 29.630 0.00 0.00 0.00 3.06
3044 3219 7.857389 GCATAGATTCATTCATTTTGCTTCGTA 59.143 33.333 0.00 0.00 0.00 3.43
3045 3220 6.694411 GCATAGATTCATTCATTTTGCTTCGT 59.306 34.615 0.00 0.00 0.00 3.85
3046 3221 6.916387 AGCATAGATTCATTCATTTTGCTTCG 59.084 34.615 0.00 0.00 0.00 3.79
3047 3222 8.136165 AGAGCATAGATTCATTCATTTTGCTTC 58.864 33.333 0.00 0.00 0.00 3.86
3048 3223 8.008513 AGAGCATAGATTCATTCATTTTGCTT 57.991 30.769 0.00 0.00 0.00 3.91
3049 3224 7.584122 AGAGCATAGATTCATTCATTTTGCT 57.416 32.000 0.00 0.00 0.00 3.91
3050 3225 9.740239 TTTAGAGCATAGATTCATTCATTTTGC 57.260 29.630 0.00 0.00 0.00 3.68
3080 3255 9.524496 ACTACCAAATACGGATGTATATAGACA 57.476 33.333 2.07 2.07 40.42 3.41
3082 3257 9.182214 GGACTACCAAATACGGATGTATATAGA 57.818 37.037 0.00 0.00 36.89 1.98
3083 3258 8.963725 TGGACTACCAAATACGGATGTATATAG 58.036 37.037 0.00 0.00 43.91 1.31
3084 3259 8.882557 TGGACTACCAAATACGGATGTATATA 57.117 34.615 0.00 0.00 43.91 0.86
3085 3260 7.786046 TGGACTACCAAATACGGATGTATAT 57.214 36.000 0.00 0.00 43.91 0.86
3101 3276 8.678199 CCTTTTAGAGATTTCAAATGGACTACC 58.322 37.037 0.00 0.00 31.44 3.18
3102 3277 9.449719 TCCTTTTAGAGATTTCAAATGGACTAC 57.550 33.333 0.00 0.00 33.17 2.73
3103 3278 9.449719 GTCCTTTTAGAGATTTCAAATGGACTA 57.550 33.333 21.88 0.00 44.76 2.59
3104 3279 8.341892 GTCCTTTTAGAGATTTCAAATGGACT 57.658 34.615 21.88 0.00 44.76 3.85
3105 3280 8.341892 AGTCCTTTTAGAGATTTCAAATGGAC 57.658 34.615 21.78 21.78 46.54 4.02
3106 3281 8.940397 AAGTCCTTTTAGAGATTTCAAATGGA 57.060 30.769 0.00 9.53 34.75 3.41
3122 3297 7.991460 CCTCCGTTCCTAAATATAAGTCCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
3123 3298 7.346436 TCCTCCGTTCCTAAATATAAGTCCTTT 59.654 37.037 0.00 0.00 0.00 3.11
3124 3299 6.842807 TCCTCCGTTCCTAAATATAAGTCCTT 59.157 38.462 0.00 0.00 0.00 3.36
3125 3300 6.379579 TCCTCCGTTCCTAAATATAAGTCCT 58.620 40.000 0.00 0.00 0.00 3.85
3126 3301 6.661304 TCCTCCGTTCCTAAATATAAGTCC 57.339 41.667 0.00 0.00 0.00 3.85
3127 3302 7.724287 ACTTCCTCCGTTCCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
3128 3303 7.672122 ACTTCCTCCGTTCCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
3138 3313 9.993454 GTATTAATAAATACTTCCTCCGTTCCT 57.007 33.333 0.00 0.00 42.79 3.36
3185 3364 0.396435 TAACACACAGCACCTCAGGG 59.604 55.000 0.00 0.00 38.88 4.45
3648 3951 1.159285 CGTGACATGAGCCACACAAT 58.841 50.000 0.00 0.00 33.13 2.71
3689 3992 3.434641 CAGAAACGAGTGATGAACATGCT 59.565 43.478 0.00 0.00 0.00 3.79
3928 4231 1.238439 CCACATATTCCCATCCGTGC 58.762 55.000 0.00 0.00 0.00 5.34
4005 4308 8.206867 TCCAGTCCTGAATAGAACATCTTATTG 58.793 37.037 0.00 0.00 0.00 1.90
4150 4453 2.158475 GCACCTATGGGATGATGGGAAA 60.158 50.000 0.25 0.00 36.25 3.13
4457 4760 8.974060 TCTAATCAAACAACTGACCTTTAAGT 57.026 30.769 0.00 0.00 0.00 2.24
4622 4926 3.629398 GGAAAGAATACAGTGAGCCCATG 59.371 47.826 0.00 0.00 0.00 3.66
4743 5178 1.396301 GCGCAAGGAGATTCAACTCAG 59.604 52.381 0.30 0.00 38.51 3.35
4862 5297 2.109126 GGCGCTTCCTAACCTGCAG 61.109 63.158 7.64 6.78 0.00 4.41
4982 5417 9.150348 CAGAAAAGGTGTATTCAGTTTTTGTTT 57.850 29.630 0.41 0.00 0.00 2.83
4983 5418 8.311109 ACAGAAAAGGTGTATTCAGTTTTTGTT 58.689 29.630 0.41 0.00 0.00 2.83
4984 5419 7.836842 ACAGAAAAGGTGTATTCAGTTTTTGT 58.163 30.769 0.41 0.00 0.00 2.83
4985 5420 9.965824 ATACAGAAAAGGTGTATTCAGTTTTTG 57.034 29.630 0.00 0.00 37.77 2.44
5217 5766 6.000840 TGATTGCATTACTTGTGGAGTTACA 58.999 36.000 0.00 0.00 39.86 2.41
5226 5775 7.703621 GCATCTAACATTGATTGCATTACTTGT 59.296 33.333 0.00 0.00 0.00 3.16
5360 5912 2.440147 CACCATTGCCCTCCACCA 59.560 61.111 0.00 0.00 0.00 4.17
5429 5981 1.609208 CCAAGTTGGTCTTCACCCAG 58.391 55.000 14.21 0.00 42.99 4.45
5463 6015 2.416547 CCTGCCTTGTCTACACATTTCG 59.583 50.000 0.00 0.00 30.55 3.46
5507 6059 3.043340 AAAAACACTTGCGTGCACC 57.957 47.368 12.15 4.74 45.10 5.01
5652 6206 8.684520 GTTTGAACTAGCTACTATTCAGAGGTA 58.315 37.037 9.24 0.00 32.90 3.08
5855 6409 1.067582 GGGTATTCGCAGACTCCCG 59.932 63.158 0.00 0.00 34.32 5.14
5948 6502 3.306166 CCGGAGACACGAATAATGTGAAC 59.694 47.826 0.00 0.00 39.73 3.18
6032 6586 2.500098 TGAGAACTAATGGAGAACCCGG 59.500 50.000 0.00 0.00 37.93 5.73
6143 6697 0.318762 GGGTCGAGGAGCATGGTATC 59.681 60.000 0.00 0.00 0.00 2.24
6155 6709 7.010275 GCTAGTAACAAAAAGATAAGGGTCGAG 59.990 40.741 0.00 0.00 0.00 4.04
6232 6786 2.173519 CCTTGCATCAGTGGGAACATT 58.826 47.619 0.00 0.00 46.14 2.71
6332 6886 5.885912 AGCCCTGGTAATATAGTTGTGTTTG 59.114 40.000 0.00 0.00 0.00 2.93
6333 6887 6.074698 AGCCCTGGTAATATAGTTGTGTTT 57.925 37.500 0.00 0.00 0.00 2.83
6355 6910 8.324163 AGTACTTGCTAACATAAACCTGAAAG 57.676 34.615 0.00 0.00 0.00 2.62
6378 6933 6.803587 ATTATATTTTGGGATGGAGGGAGT 57.196 37.500 0.00 0.00 0.00 3.85
6379 6934 7.933223 AGTATTATATTTTGGGATGGAGGGAG 58.067 38.462 0.00 0.00 0.00 4.30
6380 6935 7.036863 GGAGTATTATATTTTGGGATGGAGGGA 60.037 40.741 0.00 0.00 0.00 4.20
6381 6936 7.119387 GGAGTATTATATTTTGGGATGGAGGG 58.881 42.308 0.00 0.00 0.00 4.30
6382 6937 7.036571 AGGGAGTATTATATTTTGGGATGGAGG 60.037 40.741 0.00 0.00 0.00 4.30
6383 6938 7.933223 AGGGAGTATTATATTTTGGGATGGAG 58.067 38.462 0.00 0.00 0.00 3.86
6384 6939 7.744068 AGAGGGAGTATTATATTTTGGGATGGA 59.256 37.037 0.00 0.00 0.00 3.41
6385 6940 7.831193 CAGAGGGAGTATTATATTTTGGGATGG 59.169 40.741 0.00 0.00 0.00 3.51
6386 6941 8.386264 ACAGAGGGAGTATTATATTTTGGGATG 58.614 37.037 0.00 0.00 0.00 3.51
6387 6942 8.525729 ACAGAGGGAGTATTATATTTTGGGAT 57.474 34.615 0.00 0.00 0.00 3.85
6388 6943 7.947782 ACAGAGGGAGTATTATATTTTGGGA 57.052 36.000 0.00 0.00 0.00 4.37
6389 6944 8.217799 TGAACAGAGGGAGTATTATATTTTGGG 58.782 37.037 0.00 0.00 0.00 4.12
6390 6945 9.799106 ATGAACAGAGGGAGTATTATATTTTGG 57.201 33.333 0.00 0.00 0.00 3.28
6399 6954 8.934023 TTACAAAAATGAACAGAGGGAGTATT 57.066 30.769 0.00 0.00 0.00 1.89
6400 6955 8.383175 TCTTACAAAAATGAACAGAGGGAGTAT 58.617 33.333 0.00 0.00 0.00 2.12
6401 6956 7.660208 GTCTTACAAAAATGAACAGAGGGAGTA 59.340 37.037 0.00 0.00 0.00 2.59
6402 6957 6.486993 GTCTTACAAAAATGAACAGAGGGAGT 59.513 38.462 0.00 0.00 0.00 3.85
6403 6958 6.347725 CGTCTTACAAAAATGAACAGAGGGAG 60.348 42.308 0.00 0.00 0.00 4.30
6404 6959 5.468746 CGTCTTACAAAAATGAACAGAGGGA 59.531 40.000 0.00 0.00 0.00 4.20
6405 6960 5.238650 ACGTCTTACAAAAATGAACAGAGGG 59.761 40.000 0.00 0.00 0.00 4.30
6406 6961 6.300354 ACGTCTTACAAAAATGAACAGAGG 57.700 37.500 0.00 0.00 0.00 3.69
6407 6962 8.614994 AAAACGTCTTACAAAAATGAACAGAG 57.385 30.769 0.00 0.00 0.00 3.35
6408 6963 9.710979 CTAAAACGTCTTACAAAAATGAACAGA 57.289 29.630 0.00 0.00 0.00 3.41
6409 6964 9.710979 TCTAAAACGTCTTACAAAAATGAACAG 57.289 29.630 0.00 0.00 0.00 3.16
6410 6965 9.493206 GTCTAAAACGTCTTACAAAAATGAACA 57.507 29.630 0.00 0.00 0.00 3.18
6411 6966 9.493206 TGTCTAAAACGTCTTACAAAAATGAAC 57.507 29.630 0.00 0.00 0.00 3.18
6420 6975 9.531942 TGTCTTAAATGTCTAAAACGTCTTACA 57.468 29.630 0.00 0.00 0.00 2.41
6423 6978 8.885722 TGTTGTCTTAAATGTCTAAAACGTCTT 58.114 29.630 0.00 0.00 0.00 3.01
6424 6979 8.428186 TGTTGTCTTAAATGTCTAAAACGTCT 57.572 30.769 0.00 0.00 0.00 4.18
6425 6980 9.314501 GATGTTGTCTTAAATGTCTAAAACGTC 57.685 33.333 0.00 0.00 0.00 4.34
6426 6981 9.052759 AGATGTTGTCTTAAATGTCTAAAACGT 57.947 29.630 0.00 0.00 31.47 3.99
6456 7011 9.899226 GTTTAAGACAGCTGAAAATTGAACTAT 57.101 29.630 23.35 0.00 0.00 2.12
6457 7012 8.898761 TGTTTAAGACAGCTGAAAATTGAACTA 58.101 29.630 23.35 9.53 33.40 2.24
6458 7013 7.771183 TGTTTAAGACAGCTGAAAATTGAACT 58.229 30.769 23.35 0.00 33.40 3.01
6459 7014 7.985634 TGTTTAAGACAGCTGAAAATTGAAC 57.014 32.000 23.35 19.10 33.40 3.18
6460 7015 8.250332 AGTTGTTTAAGACAGCTGAAAATTGAA 58.750 29.630 23.35 9.05 46.47 2.69
6461 7016 7.771183 AGTTGTTTAAGACAGCTGAAAATTGA 58.229 30.769 23.35 3.18 46.47 2.57
6462 7017 7.992180 AGTTGTTTAAGACAGCTGAAAATTG 57.008 32.000 23.35 0.00 46.47 2.32
6471 7026 7.966204 TCACTTTTGTAAGTTGTTTAAGACAGC 59.034 33.333 0.00 0.00 41.85 4.40
6472 7027 9.834628 TTCACTTTTGTAAGTTGTTTAAGACAG 57.165 29.630 0.00 0.00 41.85 3.51
6473 7028 9.615295 GTTCACTTTTGTAAGTTGTTTAAGACA 57.385 29.630 0.00 0.00 41.85 3.41
6474 7029 8.782327 CGTTCACTTTTGTAAGTTGTTTAAGAC 58.218 33.333 0.00 0.00 41.85 3.01
6475 7030 7.964011 CCGTTCACTTTTGTAAGTTGTTTAAGA 59.036 33.333 0.00 0.00 41.85 2.10
6476 7031 7.964011 TCCGTTCACTTTTGTAAGTTGTTTAAG 59.036 33.333 0.00 0.00 41.85 1.85
6477 7032 7.814642 TCCGTTCACTTTTGTAAGTTGTTTAA 58.185 30.769 0.00 0.00 41.85 1.52
6478 7033 7.375106 TCCGTTCACTTTTGTAAGTTGTTTA 57.625 32.000 0.00 0.00 41.85 2.01
6479 7034 6.256912 TCCGTTCACTTTTGTAAGTTGTTT 57.743 33.333 0.00 0.00 41.85 2.83
6480 7035 5.163693 CCTCCGTTCACTTTTGTAAGTTGTT 60.164 40.000 0.00 0.00 41.85 2.83
6481 7036 4.334481 CCTCCGTTCACTTTTGTAAGTTGT 59.666 41.667 0.00 0.00 41.85 3.32
6482 7037 4.261031 CCCTCCGTTCACTTTTGTAAGTTG 60.261 45.833 0.00 0.00 41.85 3.16
6483 7038 3.881089 CCCTCCGTTCACTTTTGTAAGTT 59.119 43.478 0.00 0.00 41.85 2.66
6484 7039 3.135167 TCCCTCCGTTCACTTTTGTAAGT 59.865 43.478 0.00 0.00 45.40 2.24
6485 7040 3.735591 TCCCTCCGTTCACTTTTGTAAG 58.264 45.455 0.00 0.00 37.40 2.34
6486 7041 3.135167 ACTCCCTCCGTTCACTTTTGTAA 59.865 43.478 0.00 0.00 0.00 2.41
6487 7042 2.701951 ACTCCCTCCGTTCACTTTTGTA 59.298 45.455 0.00 0.00 0.00 2.41
6488 7043 1.489230 ACTCCCTCCGTTCACTTTTGT 59.511 47.619 0.00 0.00 0.00 2.83
6489 7044 2.256117 ACTCCCTCCGTTCACTTTTG 57.744 50.000 0.00 0.00 0.00 2.44
6490 7045 3.581332 TGATACTCCCTCCGTTCACTTTT 59.419 43.478 0.00 0.00 0.00 2.27
6491 7046 3.170717 TGATACTCCCTCCGTTCACTTT 58.829 45.455 0.00 0.00 0.00 2.66
6492 7047 2.816411 TGATACTCCCTCCGTTCACTT 58.184 47.619 0.00 0.00 0.00 3.16
6493 7048 2.526888 TGATACTCCCTCCGTTCACT 57.473 50.000 0.00 0.00 0.00 3.41
6494 7049 3.821421 AATGATACTCCCTCCGTTCAC 57.179 47.619 0.00 0.00 0.00 3.18
6495 7050 4.837093 AAAATGATACTCCCTCCGTTCA 57.163 40.909 0.00 0.00 0.00 3.18
6496 7051 5.064834 GTCAAAAATGATACTCCCTCCGTTC 59.935 44.000 0.00 0.00 0.00 3.95
6497 7052 4.941873 GTCAAAAATGATACTCCCTCCGTT 59.058 41.667 0.00 0.00 0.00 4.44
6498 7053 4.019681 TGTCAAAAATGATACTCCCTCCGT 60.020 41.667 0.00 0.00 0.00 4.69
6499 7054 4.332819 GTGTCAAAAATGATACTCCCTCCG 59.667 45.833 0.00 0.00 0.00 4.63
6500 7055 5.501156 AGTGTCAAAAATGATACTCCCTCC 58.499 41.667 2.84 0.00 35.79 4.30
6501 7056 8.738645 ATAAGTGTCAAAAATGATACTCCCTC 57.261 34.615 8.38 0.00 38.93 4.30
6509 7064 9.382275 GCCCAAAATATAAGTGTCAAAAATGAT 57.618 29.630 0.00 0.00 0.00 2.45
6510 7065 7.821846 GGCCCAAAATATAAGTGTCAAAAATGA 59.178 33.333 0.00 0.00 0.00 2.57
6511 7066 7.605691 TGGCCCAAAATATAAGTGTCAAAAATG 59.394 33.333 0.00 0.00 0.00 2.32
6512 7067 7.684529 TGGCCCAAAATATAAGTGTCAAAAAT 58.315 30.769 0.00 0.00 0.00 1.82
6513 7068 7.015682 TCTGGCCCAAAATATAAGTGTCAAAAA 59.984 33.333 0.00 0.00 0.00 1.94
6514 7069 6.495181 TCTGGCCCAAAATATAAGTGTCAAAA 59.505 34.615 0.00 0.00 0.00 2.44
6515 7070 6.013379 TCTGGCCCAAAATATAAGTGTCAAA 58.987 36.000 0.00 0.00 0.00 2.69
6516 7071 5.575157 TCTGGCCCAAAATATAAGTGTCAA 58.425 37.500 0.00 0.00 0.00 3.18
6517 7072 5.186256 TCTGGCCCAAAATATAAGTGTCA 57.814 39.130 0.00 0.00 0.00 3.58
6518 7073 4.580580 CCTCTGGCCCAAAATATAAGTGTC 59.419 45.833 0.00 0.00 0.00 3.67
6519 7074 4.536765 CCTCTGGCCCAAAATATAAGTGT 58.463 43.478 0.00 0.00 0.00 3.55
6520 7075 3.891366 CCCTCTGGCCCAAAATATAAGTG 59.109 47.826 0.00 0.00 0.00 3.16
6521 7076 3.791545 TCCCTCTGGCCCAAAATATAAGT 59.208 43.478 0.00 0.00 0.00 2.24
6522 7077 4.141158 ACTCCCTCTGGCCCAAAATATAAG 60.141 45.833 0.00 0.00 0.00 1.73
6523 7078 3.791545 ACTCCCTCTGGCCCAAAATATAA 59.208 43.478 0.00 0.00 0.00 0.98
6524 7079 3.403322 ACTCCCTCTGGCCCAAAATATA 58.597 45.455 0.00 0.00 0.00 0.86
6525 7080 2.217776 ACTCCCTCTGGCCCAAAATAT 58.782 47.619 0.00 0.00 0.00 1.28
6526 7081 1.681229 ACTCCCTCTGGCCCAAAATA 58.319 50.000 0.00 0.00 0.00 1.40
6527 7082 1.566231 CTACTCCCTCTGGCCCAAAAT 59.434 52.381 0.00 0.00 0.00 1.82
6528 7083 0.991920 CTACTCCCTCTGGCCCAAAA 59.008 55.000 0.00 0.00 0.00 2.44
6529 7084 0.914417 CCTACTCCCTCTGGCCCAAA 60.914 60.000 0.00 0.00 0.00 3.28
6530 7085 1.306997 CCTACTCCCTCTGGCCCAA 60.307 63.158 0.00 0.00 0.00 4.12
6531 7086 2.119847 AACCTACTCCCTCTGGCCCA 62.120 60.000 0.00 0.00 0.00 5.36
6532 7087 0.031414 TAACCTACTCCCTCTGGCCC 60.031 60.000 0.00 0.00 0.00 5.80
6533 7088 2.104669 ATAACCTACTCCCTCTGGCC 57.895 55.000 0.00 0.00 0.00 5.36
6534 7089 4.417437 TCATATAACCTACTCCCTCTGGC 58.583 47.826 0.00 0.00 0.00 4.85
6535 7090 6.957020 AGAATCATATAACCTACTCCCTCTGG 59.043 42.308 0.00 0.00 0.00 3.86
6536 7091 7.893302 AGAGAATCATATAACCTACTCCCTCTG 59.107 40.741 0.00 0.00 37.82 3.35
6537 7092 8.006967 AGAGAATCATATAACCTACTCCCTCT 57.993 38.462 0.00 0.00 37.82 3.69
6538 7093 9.403583 CTAGAGAATCATATAACCTACTCCCTC 57.596 40.741 0.00 0.00 37.82 4.30
6539 7094 9.129870 TCTAGAGAATCATATAACCTACTCCCT 57.870 37.037 0.00 0.00 37.82 4.20
6540 7095 9.403583 CTCTAGAGAATCATATAACCTACTCCC 57.596 40.741 15.05 0.00 37.82 4.30
6541 7096 9.969001 ACTCTAGAGAATCATATAACCTACTCC 57.031 37.037 26.57 0.00 37.82 3.85
6546 7101 9.173021 CGATGACTCTAGAGAATCATATAACCT 57.827 37.037 26.57 3.72 37.82 3.50
6547 7102 7.913297 GCGATGACTCTAGAGAATCATATAACC 59.087 40.741 26.57 11.45 37.82 2.85
6571 7126 5.794687 TTTAGGTGATTCACTTGTATGCG 57.205 39.130 16.02 0.00 34.40 4.73
6594 7150 3.670625 TGTCCGAATCCGATGTCTTTTT 58.329 40.909 0.00 0.00 38.22 1.94
6672 7238 3.660865 ACGAGCTTTGGTACTTGGTTAG 58.339 45.455 0.00 0.00 0.00 2.34
6673 7239 3.756933 ACGAGCTTTGGTACTTGGTTA 57.243 42.857 0.00 0.00 0.00 2.85
6685 7251 0.749049 GGGGTATCCGTACGAGCTTT 59.251 55.000 18.76 0.00 0.00 3.51
6767 7333 1.279271 GTCCAACCTATGTGCAGGAGT 59.721 52.381 0.00 0.00 39.18 3.85
6768 7334 1.278985 TGTCCAACCTATGTGCAGGAG 59.721 52.381 0.00 0.00 39.18 3.69
6769 7335 1.278985 CTGTCCAACCTATGTGCAGGA 59.721 52.381 0.00 0.00 39.18 3.86
6770 7336 1.679944 CCTGTCCAACCTATGTGCAGG 60.680 57.143 0.00 0.00 40.35 4.85
6771 7337 1.679944 CCCTGTCCAACCTATGTGCAG 60.680 57.143 0.00 0.00 0.00 4.41
6772 7338 0.327924 CCCTGTCCAACCTATGTGCA 59.672 55.000 0.00 0.00 0.00 4.57
6773 7339 0.328258 ACCCTGTCCAACCTATGTGC 59.672 55.000 0.00 0.00 0.00 4.57
6775 7341 1.909302 CAGACCCTGTCCAACCTATGT 59.091 52.381 0.00 0.00 32.18 2.29
6776 7342 2.169352 CTCAGACCCTGTCCAACCTATG 59.831 54.545 0.00 0.00 32.18 2.23
6777 7343 2.225650 ACTCAGACCCTGTCCAACCTAT 60.226 50.000 0.00 0.00 32.18 2.57
6778 7344 1.149288 ACTCAGACCCTGTCCAACCTA 59.851 52.381 0.00 0.00 32.18 3.08
6779 7345 0.104934 ACTCAGACCCTGTCCAACCT 60.105 55.000 0.00 0.00 32.18 3.50
6780 7346 0.765510 AACTCAGACCCTGTCCAACC 59.234 55.000 0.00 0.00 32.18 3.77
6781 7347 1.694696 AGAACTCAGACCCTGTCCAAC 59.305 52.381 0.00 0.00 32.18 3.77
6784 7350 4.828072 ATTAAGAACTCAGACCCTGTCC 57.172 45.455 0.00 0.00 32.18 4.02
6785 7351 8.697292 ACTATAATTAAGAACTCAGACCCTGTC 58.303 37.037 0.00 0.00 32.61 3.51
6787 7353 9.535878 GAACTATAATTAAGAACTCAGACCCTG 57.464 37.037 0.00 0.00 0.00 4.45
6788 7354 8.414778 CGAACTATAATTAAGAACTCAGACCCT 58.585 37.037 0.00 0.00 0.00 4.34
6790 7356 9.583765 AACGAACTATAATTAAGAACTCAGACC 57.416 33.333 0.00 0.00 0.00 3.85
6799 7365 8.480501 AGCAGGGTAAACGAACTATAATTAAGA 58.519 33.333 0.00 0.00 0.00 2.10
6813 7388 3.242316 GCTATTTCGAAGCAGGGTAAACG 60.242 47.826 2.70 0.00 39.83 3.60
6833 7408 8.514594 TGAATGAAAAGACGATCTATTTTTGCT 58.485 29.630 0.00 0.00 0.00 3.91
6974 7672 1.337074 ACGTTTTGGGCTGCATGATTG 60.337 47.619 0.50 0.00 0.00 2.67
6996 7694 3.470709 CTTCCACTTGAAGTTCTCTGCA 58.529 45.455 4.17 0.00 44.59 4.41
7200 7899 3.843868 GCATTTTGATGAGATGAGCGACG 60.844 47.826 0.00 0.00 0.00 5.12
7278 8010 9.031360 CGTGCACTAAGTTGACAAATATAGTAT 57.969 33.333 16.19 0.00 0.00 2.12
7319 8082 0.457443 CTGGCAGCAGTCACGATCTA 59.543 55.000 0.00 0.00 0.00 1.98
7429 8193 2.799562 CGTCTGCTGTTGTGTTCTGAGA 60.800 50.000 0.00 0.00 0.00 3.27
7441 8205 0.588252 GTCAATTGCACGTCTGCTGT 59.412 50.000 0.00 0.00 44.57 4.40
7458 8222 6.741358 GGAAAAATATGACGTGTGCTTTAGTC 59.259 38.462 0.00 0.00 0.00 2.59
7673 8437 1.677217 GCATGAGACACTCAAGACCCC 60.677 57.143 0.00 0.00 44.04 4.95
7834 8598 0.179097 GAAGATCGAGTGGGAGTGCC 60.179 60.000 0.00 0.00 0.00 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.