Multiple sequence alignment - TraesCS2B01G212100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G212100 chr2B 100.000 2825 0 0 1 2825 196010352 196013176 0.000000e+00 5217.0
1 TraesCS2B01G212100 chr2A 90.428 2382 96 40 517 2825 163855966 163853644 0.000000e+00 3014.0
2 TraesCS2B01G212100 chr2D 93.725 1753 68 21 512 2248 138162341 138164067 0.000000e+00 2590.0
3 TraesCS2B01G212100 chr2D 91.472 598 20 8 2242 2822 138174555 138175138 0.000000e+00 793.0
4 TraesCS2B01G212100 chr6B 90.598 468 32 1 1118 1585 492822288 492821833 6.690000e-171 610.0
5 TraesCS2B01G212100 chr1A 72.669 311 75 7 20 326 538177285 538176981 8.330000e-16 95.3
6 TraesCS2B01G212100 chr5D 76.316 152 30 4 175 322 560257729 560257580 3.020000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G212100 chr2B 196010352 196013176 2824 False 5217 5217 100.000 1 2825 1 chr2B.!!$F1 2824
1 TraesCS2B01G212100 chr2A 163853644 163855966 2322 True 3014 3014 90.428 517 2825 1 chr2A.!!$R1 2308
2 TraesCS2B01G212100 chr2D 138162341 138164067 1726 False 2590 2590 93.725 512 2248 1 chr2D.!!$F1 1736
3 TraesCS2B01G212100 chr2D 138174555 138175138 583 False 793 793 91.472 2242 2822 1 chr2D.!!$F2 580

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
665 667 0.028902 GCAACGTCGGGATAATTGCC 59.971 55.0 5.04 0.0 39.78 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2494 2557 1.421485 GAGAAACGTCTGCATGCGG 59.579 57.895 21.02 21.02 32.8 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.973835 TTTTGAGTTCGTTTAGATTTTTGTGT 57.026 26.923 0.00 0.00 0.00 3.72
27 28 9.493206 TTTGAGTTCGTTTAGATTTTTGTGTAC 57.507 29.630 0.00 0.00 0.00 2.90
28 29 8.428186 TGAGTTCGTTTAGATTTTTGTGTACT 57.572 30.769 0.00 0.00 0.00 2.73
29 30 8.332464 TGAGTTCGTTTAGATTTTTGTGTACTG 58.668 33.333 0.00 0.00 0.00 2.74
30 31 8.205131 AGTTCGTTTAGATTTTTGTGTACTGT 57.795 30.769 0.00 0.00 0.00 3.55
31 32 8.671028 AGTTCGTTTAGATTTTTGTGTACTGTT 58.329 29.630 0.00 0.00 0.00 3.16
32 33 9.281075 GTTCGTTTAGATTTTTGTGTACTGTTT 57.719 29.630 0.00 0.00 0.00 2.83
35 36 9.377383 CGTTTAGATTTTTGTGTACTGTTTAGG 57.623 33.333 0.00 0.00 0.00 2.69
39 40 8.166422 AGATTTTTGTGTACTGTTTAGGAAGG 57.834 34.615 0.00 0.00 0.00 3.46
40 41 5.761165 TTTTGTGTACTGTTTAGGAAGGC 57.239 39.130 0.00 0.00 0.00 4.35
41 42 4.425180 TTGTGTACTGTTTAGGAAGGCA 57.575 40.909 0.00 0.00 0.00 4.75
42 43 4.425180 TGTGTACTGTTTAGGAAGGCAA 57.575 40.909 0.00 0.00 0.00 4.52
43 44 4.385825 TGTGTACTGTTTAGGAAGGCAAG 58.614 43.478 0.00 0.00 0.00 4.01
44 45 3.751698 GTGTACTGTTTAGGAAGGCAAGG 59.248 47.826 0.00 0.00 0.00 3.61
45 46 1.911057 ACTGTTTAGGAAGGCAAGGC 58.089 50.000 0.00 0.00 0.00 4.35
46 47 1.144913 ACTGTTTAGGAAGGCAAGGCA 59.855 47.619 0.00 0.00 0.00 4.75
47 48 2.238521 CTGTTTAGGAAGGCAAGGCAA 58.761 47.619 0.00 0.00 0.00 4.52
48 49 1.960689 TGTTTAGGAAGGCAAGGCAAC 59.039 47.619 0.00 0.00 0.00 4.17
49 50 1.068541 GTTTAGGAAGGCAAGGCAACG 60.069 52.381 0.00 0.00 46.39 4.10
50 51 0.398696 TTAGGAAGGCAAGGCAACGA 59.601 50.000 0.00 0.00 46.39 3.85
51 52 0.321298 TAGGAAGGCAAGGCAACGAC 60.321 55.000 0.00 0.00 46.39 4.34
52 53 2.556287 GAAGGCAAGGCAACGACG 59.444 61.111 0.00 0.00 46.39 5.12
53 54 1.959226 GAAGGCAAGGCAACGACGA 60.959 57.895 0.00 0.00 46.39 4.20
54 55 2.171489 GAAGGCAAGGCAACGACGAC 62.171 60.000 0.00 0.00 46.39 4.34
55 56 4.072088 GGCAAGGCAACGACGACG 62.072 66.667 5.58 5.58 46.39 5.12
56 57 3.033764 GCAAGGCAACGACGACGA 61.034 61.111 15.32 0.00 46.39 4.20
57 58 2.844146 CAAGGCAACGACGACGAC 59.156 61.111 15.32 2.82 46.39 4.34
58 59 1.660575 CAAGGCAACGACGACGACT 60.661 57.895 15.32 3.71 46.39 4.18
59 60 1.371389 AAGGCAACGACGACGACTC 60.371 57.895 15.32 1.84 46.39 3.36
60 61 1.793134 AAGGCAACGACGACGACTCT 61.793 55.000 15.32 3.14 46.39 3.24
61 62 1.796749 GGCAACGACGACGACTCTC 60.797 63.158 15.32 0.00 42.66 3.20
62 63 1.207085 GCAACGACGACGACTCTCT 59.793 57.895 15.32 0.00 42.66 3.10
63 64 0.441533 GCAACGACGACGACTCTCTA 59.558 55.000 15.32 0.00 42.66 2.43
64 65 1.136141 GCAACGACGACGACTCTCTAA 60.136 52.381 15.32 0.00 42.66 2.10
65 66 2.663879 GCAACGACGACGACTCTCTAAA 60.664 50.000 15.32 0.00 42.66 1.85
66 67 3.154489 CAACGACGACGACTCTCTAAAG 58.846 50.000 15.32 0.00 42.66 1.85
67 68 2.681706 ACGACGACGACTCTCTAAAGA 58.318 47.619 15.32 0.00 42.66 2.52
68 69 3.260740 ACGACGACGACTCTCTAAAGAT 58.739 45.455 15.32 0.00 42.66 2.40
69 70 3.062369 ACGACGACGACTCTCTAAAGATG 59.938 47.826 15.32 0.00 42.66 2.90
70 71 3.306434 CGACGACGACTCTCTAAAGATGA 59.694 47.826 0.00 0.00 42.66 2.92
71 72 4.201695 CGACGACGACTCTCTAAAGATGAA 60.202 45.833 0.00 0.00 42.66 2.57
72 73 5.624344 ACGACGACTCTCTAAAGATGAAA 57.376 39.130 0.00 0.00 0.00 2.69
73 74 5.392286 ACGACGACTCTCTAAAGATGAAAC 58.608 41.667 0.00 0.00 0.00 2.78
74 75 5.048921 ACGACGACTCTCTAAAGATGAAACA 60.049 40.000 0.00 0.00 0.00 2.83
75 76 5.856986 CGACGACTCTCTAAAGATGAAACAA 59.143 40.000 0.00 0.00 0.00 2.83
76 77 6.362551 CGACGACTCTCTAAAGATGAAACAAA 59.637 38.462 0.00 0.00 0.00 2.83
77 78 7.409874 CGACGACTCTCTAAAGATGAAACAAAG 60.410 40.741 0.00 0.00 0.00 2.77
78 79 7.210873 ACGACTCTCTAAAGATGAAACAAAGT 58.789 34.615 0.00 0.00 0.00 2.66
79 80 7.711339 ACGACTCTCTAAAGATGAAACAAAGTT 59.289 33.333 0.00 0.00 0.00 2.66
80 81 8.217778 CGACTCTCTAAAGATGAAACAAAGTTC 58.782 37.037 0.00 0.00 0.00 3.01
81 82 9.267084 GACTCTCTAAAGATGAAACAAAGTTCT 57.733 33.333 0.00 0.00 0.00 3.01
82 83 9.267084 ACTCTCTAAAGATGAAACAAAGTTCTC 57.733 33.333 0.00 0.00 0.00 2.87
83 84 8.608844 TCTCTAAAGATGAAACAAAGTTCTCC 57.391 34.615 0.00 0.00 0.00 3.71
84 85 8.432805 TCTCTAAAGATGAAACAAAGTTCTCCT 58.567 33.333 0.00 0.00 0.00 3.69
85 86 8.608844 TCTAAAGATGAAACAAAGTTCTCCTC 57.391 34.615 0.00 0.00 0.00 3.71
86 87 5.931441 AAGATGAAACAAAGTTCTCCTCG 57.069 39.130 0.00 0.00 0.00 4.63
87 88 4.962155 AGATGAAACAAAGTTCTCCTCGT 58.038 39.130 0.00 0.00 0.00 4.18
88 89 5.368989 AGATGAAACAAAGTTCTCCTCGTT 58.631 37.500 0.00 0.00 0.00 3.85
89 90 5.823045 AGATGAAACAAAGTTCTCCTCGTTT 59.177 36.000 0.00 0.00 0.00 3.60
90 91 6.990349 AGATGAAACAAAGTTCTCCTCGTTTA 59.010 34.615 0.00 0.00 0.00 2.01
91 92 6.598753 TGAAACAAAGTTCTCCTCGTTTAG 57.401 37.500 0.00 0.00 0.00 1.85
92 93 6.110707 TGAAACAAAGTTCTCCTCGTTTAGT 58.889 36.000 0.00 0.00 0.00 2.24
93 94 7.267128 TGAAACAAAGTTCTCCTCGTTTAGTA 58.733 34.615 0.00 0.00 0.00 1.82
94 95 7.223387 TGAAACAAAGTTCTCCTCGTTTAGTAC 59.777 37.037 0.00 0.00 0.00 2.73
95 96 5.536260 ACAAAGTTCTCCTCGTTTAGTACC 58.464 41.667 0.00 0.00 0.00 3.34
96 97 5.303845 ACAAAGTTCTCCTCGTTTAGTACCT 59.696 40.000 0.00 0.00 0.00 3.08
97 98 5.388408 AAGTTCTCCTCGTTTAGTACCTG 57.612 43.478 0.00 0.00 0.00 4.00
98 99 4.405548 AGTTCTCCTCGTTTAGTACCTGT 58.594 43.478 0.00 0.00 0.00 4.00
99 100 4.458642 AGTTCTCCTCGTTTAGTACCTGTC 59.541 45.833 0.00 0.00 0.00 3.51
100 101 3.350833 TCTCCTCGTTTAGTACCTGTCC 58.649 50.000 0.00 0.00 0.00 4.02
101 102 3.009916 TCTCCTCGTTTAGTACCTGTCCT 59.990 47.826 0.00 0.00 0.00 3.85
102 103 3.087031 TCCTCGTTTAGTACCTGTCCTG 58.913 50.000 0.00 0.00 0.00 3.86
103 104 3.087031 CCTCGTTTAGTACCTGTCCTGA 58.913 50.000 0.00 0.00 0.00 3.86
104 105 3.119566 CCTCGTTTAGTACCTGTCCTGAC 60.120 52.174 0.00 0.00 0.00 3.51
105 106 2.485426 TCGTTTAGTACCTGTCCTGACG 59.515 50.000 0.00 0.00 0.00 4.35
106 107 2.485426 CGTTTAGTACCTGTCCTGACGA 59.515 50.000 0.00 0.00 0.00 4.20
107 108 3.128242 CGTTTAGTACCTGTCCTGACGAT 59.872 47.826 0.00 0.00 0.00 3.73
108 109 4.421948 GTTTAGTACCTGTCCTGACGATG 58.578 47.826 0.00 0.00 0.00 3.84
109 110 0.818296 AGTACCTGTCCTGACGATGC 59.182 55.000 0.00 0.00 0.00 3.91
110 111 0.530744 GTACCTGTCCTGACGATGCA 59.469 55.000 0.00 0.00 0.00 3.96
111 112 1.137086 GTACCTGTCCTGACGATGCAT 59.863 52.381 0.00 0.00 0.00 3.96
112 113 0.176680 ACCTGTCCTGACGATGCATC 59.823 55.000 17.10 17.10 0.00 3.91
125 126 4.684265 GCATCGAGCGTCGTTAGA 57.316 55.556 7.16 0.00 41.35 2.10
126 127 2.485933 GCATCGAGCGTCGTTAGAG 58.514 57.895 7.16 0.00 41.35 2.43
127 128 0.930742 GCATCGAGCGTCGTTAGAGG 60.931 60.000 0.00 0.00 41.35 3.69
128 129 0.317103 CATCGAGCGTCGTTAGAGGG 60.317 60.000 7.16 0.00 41.35 4.30
129 130 2.061182 ATCGAGCGTCGTTAGAGGGC 62.061 60.000 7.16 0.00 41.35 5.19
130 131 2.882876 GAGCGTCGTTAGAGGGCA 59.117 61.111 0.00 0.00 33.21 5.36
131 132 1.437986 GAGCGTCGTTAGAGGGCAT 59.562 57.895 0.00 0.00 33.21 4.40
132 133 0.872021 GAGCGTCGTTAGAGGGCATG 60.872 60.000 0.00 0.00 33.21 4.06
133 134 1.153628 GCGTCGTTAGAGGGCATGT 60.154 57.895 0.00 0.00 33.21 3.21
134 135 1.421410 GCGTCGTTAGAGGGCATGTG 61.421 60.000 0.00 0.00 33.21 3.21
135 136 0.172578 CGTCGTTAGAGGGCATGTGA 59.827 55.000 0.00 0.00 0.00 3.58
136 137 1.403647 CGTCGTTAGAGGGCATGTGAA 60.404 52.381 0.00 0.00 0.00 3.18
137 138 2.271800 GTCGTTAGAGGGCATGTGAAG 58.728 52.381 0.00 0.00 0.00 3.02
138 139 2.094182 GTCGTTAGAGGGCATGTGAAGA 60.094 50.000 0.00 0.00 0.00 2.87
139 140 2.766263 TCGTTAGAGGGCATGTGAAGAT 59.234 45.455 0.00 0.00 0.00 2.40
140 141 2.868583 CGTTAGAGGGCATGTGAAGATG 59.131 50.000 0.00 0.00 0.00 2.90
141 142 3.679917 CGTTAGAGGGCATGTGAAGATGT 60.680 47.826 0.00 0.00 0.00 3.06
142 143 2.414994 AGAGGGCATGTGAAGATGTG 57.585 50.000 0.00 0.00 0.00 3.21
143 144 1.632409 AGAGGGCATGTGAAGATGTGT 59.368 47.619 0.00 0.00 0.00 3.72
144 145 2.012673 GAGGGCATGTGAAGATGTGTC 58.987 52.381 0.00 0.00 0.00 3.67
145 146 1.632409 AGGGCATGTGAAGATGTGTCT 59.368 47.619 0.00 0.00 35.82 3.41
155 156 2.440539 AGATGTGTCTTCGGTGTGAC 57.559 50.000 0.00 0.00 0.00 3.67
156 157 1.060713 GATGTGTCTTCGGTGTGACG 58.939 55.000 0.00 0.00 36.10 4.35
157 158 0.319555 ATGTGTCTTCGGTGTGACGG 60.320 55.000 0.00 0.00 36.10 4.79
158 159 1.066918 GTGTCTTCGGTGTGACGGT 59.933 57.895 0.00 0.00 36.10 4.83
159 160 0.938168 GTGTCTTCGGTGTGACGGTC 60.938 60.000 0.00 0.00 36.10 4.79
160 161 1.105167 TGTCTTCGGTGTGACGGTCT 61.105 55.000 9.88 0.00 36.10 3.85
161 162 0.031721 GTCTTCGGTGTGACGGTCTT 59.968 55.000 9.88 0.00 0.00 3.01
162 163 0.031585 TCTTCGGTGTGACGGTCTTG 59.968 55.000 9.88 0.00 0.00 3.02
163 164 0.944311 CTTCGGTGTGACGGTCTTGG 60.944 60.000 9.88 0.00 0.00 3.61
164 165 2.357034 CGGTGTGACGGTCTTGGG 60.357 66.667 9.88 0.00 0.00 4.12
165 166 2.826702 GGTGTGACGGTCTTGGGT 59.173 61.111 9.88 0.00 0.00 4.51
166 167 1.597027 GGTGTGACGGTCTTGGGTG 60.597 63.158 9.88 0.00 0.00 4.61
167 168 1.597027 GTGTGACGGTCTTGGGTGG 60.597 63.158 9.88 0.00 0.00 4.61
168 169 1.762858 TGTGACGGTCTTGGGTGGA 60.763 57.895 9.88 0.00 0.00 4.02
169 170 1.125093 TGTGACGGTCTTGGGTGGAT 61.125 55.000 9.88 0.00 0.00 3.41
170 171 0.036306 GTGACGGTCTTGGGTGGATT 59.964 55.000 9.88 0.00 0.00 3.01
171 172 0.036164 TGACGGTCTTGGGTGGATTG 59.964 55.000 9.88 0.00 0.00 2.67
172 173 0.676782 GACGGTCTTGGGTGGATTGG 60.677 60.000 0.00 0.00 0.00 3.16
173 174 1.378762 CGGTCTTGGGTGGATTGGT 59.621 57.895 0.00 0.00 0.00 3.67
174 175 0.251165 CGGTCTTGGGTGGATTGGTT 60.251 55.000 0.00 0.00 0.00 3.67
175 176 1.821666 CGGTCTTGGGTGGATTGGTTT 60.822 52.381 0.00 0.00 0.00 3.27
176 177 1.618343 GGTCTTGGGTGGATTGGTTTG 59.382 52.381 0.00 0.00 0.00 2.93
177 178 1.618343 GTCTTGGGTGGATTGGTTTGG 59.382 52.381 0.00 0.00 0.00 3.28
178 179 1.501170 TCTTGGGTGGATTGGTTTGGA 59.499 47.619 0.00 0.00 0.00 3.53
179 180 2.111613 TCTTGGGTGGATTGGTTTGGAT 59.888 45.455 0.00 0.00 0.00 3.41
180 181 2.230130 TGGGTGGATTGGTTTGGATC 57.770 50.000 0.00 0.00 0.00 3.36
181 182 1.272985 TGGGTGGATTGGTTTGGATCC 60.273 52.381 4.20 4.20 41.78 3.36
185 186 3.085952 TGGATTGGTTTGGATCCAGTC 57.914 47.619 15.53 11.69 45.14 3.51
186 187 2.649312 TGGATTGGTTTGGATCCAGTCT 59.351 45.455 15.53 0.00 45.14 3.24
187 188 3.075882 TGGATTGGTTTGGATCCAGTCTT 59.924 43.478 15.53 0.00 45.14 3.01
188 189 4.089361 GGATTGGTTTGGATCCAGTCTTT 58.911 43.478 15.53 0.00 41.21 2.52
189 190 5.222233 TGGATTGGTTTGGATCCAGTCTTTA 60.222 40.000 15.53 0.00 45.14 1.85
190 191 5.893824 GGATTGGTTTGGATCCAGTCTTTAT 59.106 40.000 15.53 5.85 41.21 1.40
191 192 6.381133 GGATTGGTTTGGATCCAGTCTTTATT 59.619 38.462 15.53 0.00 41.21 1.40
192 193 7.093333 GGATTGGTTTGGATCCAGTCTTTATTT 60.093 37.037 15.53 0.00 41.21 1.40
193 194 6.588719 TGGTTTGGATCCAGTCTTTATTTG 57.411 37.500 15.53 0.00 0.00 2.32
194 195 6.074648 TGGTTTGGATCCAGTCTTTATTTGT 58.925 36.000 15.53 0.00 0.00 2.83
195 196 6.208599 TGGTTTGGATCCAGTCTTTATTTGTC 59.791 38.462 15.53 0.00 0.00 3.18
196 197 6.434340 GGTTTGGATCCAGTCTTTATTTGTCT 59.566 38.462 15.53 0.00 0.00 3.41
197 198 7.039714 GGTTTGGATCCAGTCTTTATTTGTCTT 60.040 37.037 15.53 0.00 0.00 3.01
198 199 7.687941 TTGGATCCAGTCTTTATTTGTCTTC 57.312 36.000 15.53 0.00 0.00 2.87
199 200 6.778821 TGGATCCAGTCTTTATTTGTCTTCA 58.221 36.000 11.44 0.00 0.00 3.02
200 201 7.405292 TGGATCCAGTCTTTATTTGTCTTCAT 58.595 34.615 11.44 0.00 0.00 2.57
201 202 7.890127 TGGATCCAGTCTTTATTTGTCTTCATT 59.110 33.333 11.44 0.00 0.00 2.57
202 203 8.743714 GGATCCAGTCTTTATTTGTCTTCATTT 58.256 33.333 6.95 0.00 0.00 2.32
203 204 9.565213 GATCCAGTCTTTATTTGTCTTCATTTG 57.435 33.333 0.00 0.00 0.00 2.32
204 205 8.463930 TCCAGTCTTTATTTGTCTTCATTTGT 57.536 30.769 0.00 0.00 0.00 2.83
205 206 8.352201 TCCAGTCTTTATTTGTCTTCATTTGTG 58.648 33.333 0.00 0.00 0.00 3.33
206 207 8.137437 CCAGTCTTTATTTGTCTTCATTTGTGT 58.863 33.333 0.00 0.00 0.00 3.72
214 215 8.635765 ATTTGTCTTCATTTGTGTATACAGGT 57.364 30.769 5.62 0.00 38.23 4.00
215 216 8.458573 TTTGTCTTCATTTGTGTATACAGGTT 57.541 30.769 5.62 0.00 38.23 3.50
216 217 9.562408 TTTGTCTTCATTTGTGTATACAGGTTA 57.438 29.630 5.62 0.00 38.23 2.85
217 218 8.771920 TGTCTTCATTTGTGTATACAGGTTAG 57.228 34.615 5.62 0.00 38.23 2.34
218 219 8.590204 TGTCTTCATTTGTGTATACAGGTTAGA 58.410 33.333 5.62 0.00 38.23 2.10
219 220 9.601217 GTCTTCATTTGTGTATACAGGTTAGAT 57.399 33.333 5.62 0.00 38.23 1.98
220 221 9.817809 TCTTCATTTGTGTATACAGGTTAGATC 57.182 33.333 5.62 0.00 38.23 2.75
221 222 8.958119 TTCATTTGTGTATACAGGTTAGATCC 57.042 34.615 5.62 0.00 38.23 3.36
222 223 8.319057 TCATTTGTGTATACAGGTTAGATCCT 57.681 34.615 5.62 0.00 38.23 3.24
223 224 8.768397 TCATTTGTGTATACAGGTTAGATCCTT 58.232 33.333 5.62 0.00 38.23 3.36
224 225 9.396022 CATTTGTGTATACAGGTTAGATCCTTT 57.604 33.333 5.62 0.00 38.23 3.11
225 226 9.614792 ATTTGTGTATACAGGTTAGATCCTTTC 57.385 33.333 5.62 0.00 38.23 2.62
226 227 6.802608 TGTGTATACAGGTTAGATCCTTTCG 58.197 40.000 5.62 0.00 35.37 3.46
227 228 6.604396 TGTGTATACAGGTTAGATCCTTTCGA 59.396 38.462 5.62 0.00 35.37 3.71
228 229 7.287005 TGTGTATACAGGTTAGATCCTTTCGAT 59.713 37.037 5.62 0.00 35.37 3.59
229 230 7.808856 GTGTATACAGGTTAGATCCTTTCGATC 59.191 40.741 5.62 0.00 46.86 3.69
241 242 7.835634 GATCCTTTCGATCTACACTTCTTTT 57.164 36.000 0.00 0.00 43.65 2.27
242 243 7.835634 ATCCTTTCGATCTACACTTCTTTTC 57.164 36.000 0.00 0.00 0.00 2.29
243 244 6.755206 TCCTTTCGATCTACACTTCTTTTCA 58.245 36.000 0.00 0.00 0.00 2.69
244 245 7.386851 TCCTTTCGATCTACACTTCTTTTCAT 58.613 34.615 0.00 0.00 0.00 2.57
245 246 7.331934 TCCTTTCGATCTACACTTCTTTTCATG 59.668 37.037 0.00 0.00 0.00 3.07
246 247 7.331934 CCTTTCGATCTACACTTCTTTTCATGA 59.668 37.037 0.00 0.00 0.00 3.07
247 248 7.818493 TTCGATCTACACTTCTTTTCATGAG 57.182 36.000 0.00 0.00 0.00 2.90
248 249 5.807520 TCGATCTACACTTCTTTTCATGAGC 59.192 40.000 0.00 0.00 0.00 4.26
249 250 5.578336 CGATCTACACTTCTTTTCATGAGCA 59.422 40.000 0.00 0.00 0.00 4.26
250 251 6.091305 CGATCTACACTTCTTTTCATGAGCAA 59.909 38.462 0.00 0.00 0.00 3.91
251 252 7.201591 CGATCTACACTTCTTTTCATGAGCAAT 60.202 37.037 0.00 0.00 0.00 3.56
252 253 9.102757 GATCTACACTTCTTTTCATGAGCAATA 57.897 33.333 0.00 0.00 0.00 1.90
253 254 8.484641 TCTACACTTCTTTTCATGAGCAATAG 57.515 34.615 0.00 0.00 0.00 1.73
254 255 8.097038 TCTACACTTCTTTTCATGAGCAATAGT 58.903 33.333 0.00 0.00 0.00 2.12
255 256 7.516198 ACACTTCTTTTCATGAGCAATAGTT 57.484 32.000 0.00 0.00 0.00 2.24
256 257 7.365741 ACACTTCTTTTCATGAGCAATAGTTG 58.634 34.615 0.00 0.00 0.00 3.16
257 258 7.013655 ACACTTCTTTTCATGAGCAATAGTTGT 59.986 33.333 0.00 0.00 0.00 3.32
258 259 7.864379 CACTTCTTTTCATGAGCAATAGTTGTT 59.136 33.333 0.00 0.00 0.00 2.83
259 260 7.864379 ACTTCTTTTCATGAGCAATAGTTGTTG 59.136 33.333 0.00 0.00 0.00 3.33
260 261 7.275888 TCTTTTCATGAGCAATAGTTGTTGT 57.724 32.000 0.00 0.00 0.00 3.32
261 262 7.715657 TCTTTTCATGAGCAATAGTTGTTGTT 58.284 30.769 0.00 0.00 0.00 2.83
262 263 7.862372 TCTTTTCATGAGCAATAGTTGTTGTTC 59.138 33.333 0.00 0.00 39.06 3.18
263 264 6.882610 TTCATGAGCAATAGTTGTTGTTCT 57.117 33.333 0.00 0.00 39.27 3.01
264 265 6.245115 TCATGAGCAATAGTTGTTGTTCTG 57.755 37.500 0.00 4.06 39.27 3.02
265 266 5.997129 TCATGAGCAATAGTTGTTGTTCTGA 59.003 36.000 0.00 5.72 39.27 3.27
266 267 6.656270 TCATGAGCAATAGTTGTTGTTCTGAT 59.344 34.615 0.00 0.00 39.27 2.90
267 268 6.245115 TGAGCAATAGTTGTTGTTCTGATG 57.755 37.500 6.92 0.00 39.27 3.07
268 269 5.997129 TGAGCAATAGTTGTTGTTCTGATGA 59.003 36.000 6.92 0.00 39.27 2.92
269 270 6.486320 TGAGCAATAGTTGTTGTTCTGATGAA 59.514 34.615 6.92 0.00 39.27 2.57
270 271 7.175467 TGAGCAATAGTTGTTGTTCTGATGAAT 59.825 33.333 6.92 0.00 39.27 2.57
271 272 7.889469 AGCAATAGTTGTTGTTCTGATGAATT 58.111 30.769 0.00 0.00 34.40 2.17
272 273 7.811236 AGCAATAGTTGTTGTTCTGATGAATTG 59.189 33.333 0.00 0.00 34.40 2.32
273 274 7.062605 GCAATAGTTGTTGTTCTGATGAATTGG 59.937 37.037 0.00 0.00 34.40 3.16
274 275 7.765695 ATAGTTGTTGTTCTGATGAATTGGT 57.234 32.000 0.00 0.00 34.40 3.67
275 276 6.076981 AGTTGTTGTTCTGATGAATTGGTC 57.923 37.500 0.00 0.00 34.40 4.02
276 277 5.593909 AGTTGTTGTTCTGATGAATTGGTCA 59.406 36.000 0.00 0.00 41.67 4.02
284 285 1.488390 ATGAATTGGTCATGTGGGGC 58.512 50.000 0.00 0.00 45.69 5.80
285 286 0.614415 TGAATTGGTCATGTGGGGCC 60.614 55.000 0.00 0.00 0.00 5.80
286 287 0.324645 GAATTGGTCATGTGGGGCCT 60.325 55.000 0.84 0.00 0.00 5.19
287 288 0.324645 AATTGGTCATGTGGGGCCTC 60.325 55.000 0.84 0.00 0.00 4.70
288 289 1.508667 ATTGGTCATGTGGGGCCTCA 61.509 55.000 0.00 0.00 0.00 3.86
289 290 1.724148 TTGGTCATGTGGGGCCTCAA 61.724 55.000 7.05 0.00 0.00 3.02
290 291 1.678970 GGTCATGTGGGGCCTCAAC 60.679 63.158 7.05 0.24 0.00 3.18
291 292 1.380302 GTCATGTGGGGCCTCAACT 59.620 57.895 7.05 0.00 0.00 3.16
292 293 0.678048 GTCATGTGGGGCCTCAACTC 60.678 60.000 7.05 0.00 0.00 3.01
293 294 1.746615 CATGTGGGGCCTCAACTCG 60.747 63.158 7.05 0.00 0.00 4.18
294 295 1.918293 ATGTGGGGCCTCAACTCGA 60.918 57.895 7.05 0.00 0.00 4.04
295 296 2.047179 GTGGGGCCTCAACTCGAC 60.047 66.667 7.05 0.00 0.00 4.20
296 297 3.691342 TGGGGCCTCAACTCGACG 61.691 66.667 0.25 0.00 0.00 5.12
297 298 3.379445 GGGGCCTCAACTCGACGA 61.379 66.667 0.84 0.00 0.00 4.20
298 299 2.182030 GGGCCTCAACTCGACGAG 59.818 66.667 22.97 22.97 35.52 4.18
299 300 2.637383 GGGCCTCAACTCGACGAGT 61.637 63.158 24.44 24.44 45.64 4.18
307 308 3.325902 ACTCGACGAGTTCCTGACT 57.674 52.632 24.44 0.00 40.28 3.41
308 309 0.875728 ACTCGACGAGTTCCTGACTG 59.124 55.000 24.44 0.00 40.28 3.51
309 310 1.157585 CTCGACGAGTTCCTGACTGA 58.842 55.000 16.83 0.00 39.19 3.41
310 311 0.873054 TCGACGAGTTCCTGACTGAC 59.127 55.000 0.00 0.00 39.19 3.51
311 312 0.875728 CGACGAGTTCCTGACTGACT 59.124 55.000 0.00 0.00 39.19 3.41
312 313 2.074576 CGACGAGTTCCTGACTGACTA 58.925 52.381 0.00 0.00 39.19 2.59
313 314 2.159680 CGACGAGTTCCTGACTGACTAC 60.160 54.545 0.00 0.00 39.19 2.73
314 315 3.075884 GACGAGTTCCTGACTGACTACT 58.924 50.000 0.00 0.00 39.19 2.57
315 316 4.252073 GACGAGTTCCTGACTGACTACTA 58.748 47.826 0.00 0.00 39.19 1.82
316 317 4.002316 ACGAGTTCCTGACTGACTACTAC 58.998 47.826 0.00 0.00 39.19 2.73
317 318 4.001652 CGAGTTCCTGACTGACTACTACA 58.998 47.826 0.00 0.00 39.19 2.74
318 319 4.454847 CGAGTTCCTGACTGACTACTACAA 59.545 45.833 0.00 0.00 39.19 2.41
319 320 5.617308 CGAGTTCCTGACTGACTACTACAAC 60.617 48.000 0.00 0.00 39.19 3.32
320 321 5.138276 AGTTCCTGACTGACTACTACAACA 58.862 41.667 0.00 0.00 37.17 3.33
321 322 5.597182 AGTTCCTGACTGACTACTACAACAA 59.403 40.000 0.00 0.00 37.17 2.83
322 323 6.097839 AGTTCCTGACTGACTACTACAACAAA 59.902 38.462 0.00 0.00 37.17 2.83
323 324 6.665992 TCCTGACTGACTACTACAACAAAT 57.334 37.500 0.00 0.00 0.00 2.32
324 325 7.062749 TCCTGACTGACTACTACAACAAATT 57.937 36.000 0.00 0.00 0.00 1.82
325 326 7.506114 TCCTGACTGACTACTACAACAAATTT 58.494 34.615 0.00 0.00 0.00 1.82
326 327 8.644216 TCCTGACTGACTACTACAACAAATTTA 58.356 33.333 0.00 0.00 0.00 1.40
327 328 9.268268 CCTGACTGACTACTACAACAAATTTAA 57.732 33.333 0.00 0.00 0.00 1.52
329 330 9.048446 TGACTGACTACTACAACAAATTTAACC 57.952 33.333 0.00 0.00 0.00 2.85
330 331 9.269453 GACTGACTACTACAACAAATTTAACCT 57.731 33.333 0.00 0.00 0.00 3.50
331 332 9.052759 ACTGACTACTACAACAAATTTAACCTG 57.947 33.333 0.00 0.00 0.00 4.00
332 333 9.268268 CTGACTACTACAACAAATTTAACCTGA 57.732 33.333 0.00 0.00 0.00 3.86
333 334 9.616156 TGACTACTACAACAAATTTAACCTGAA 57.384 29.630 0.00 0.00 0.00 3.02
334 335 9.874215 GACTACTACAACAAATTTAACCTGAAC 57.126 33.333 0.00 0.00 0.00 3.18
335 336 8.843262 ACTACTACAACAAATTTAACCTGAACC 58.157 33.333 0.00 0.00 0.00 3.62
336 337 7.891498 ACTACAACAAATTTAACCTGAACCT 57.109 32.000 0.00 0.00 0.00 3.50
337 338 7.712797 ACTACAACAAATTTAACCTGAACCTG 58.287 34.615 0.00 0.00 0.00 4.00
338 339 5.912892 ACAACAAATTTAACCTGAACCTGG 58.087 37.500 0.00 0.00 0.00 4.45
339 340 5.423931 ACAACAAATTTAACCTGAACCTGGT 59.576 36.000 0.00 0.00 37.28 4.00
340 341 5.529581 ACAAATTTAACCTGAACCTGGTG 57.470 39.130 0.00 0.00 35.88 4.17
341 342 5.205056 ACAAATTTAACCTGAACCTGGTGA 58.795 37.500 0.00 0.00 35.88 4.02
342 343 5.301805 ACAAATTTAACCTGAACCTGGTGAG 59.698 40.000 0.00 0.00 35.88 3.51
343 344 4.993705 ATTTAACCTGAACCTGGTGAGA 57.006 40.909 0.00 0.00 35.88 3.27
344 345 4.351874 TTTAACCTGAACCTGGTGAGAG 57.648 45.455 0.00 0.00 35.88 3.20
345 346 2.103153 AACCTGAACCTGGTGAGAGA 57.897 50.000 0.00 0.00 35.88 3.10
346 347 1.638529 ACCTGAACCTGGTGAGAGAG 58.361 55.000 0.00 0.00 34.44 3.20
347 348 0.901124 CCTGAACCTGGTGAGAGAGG 59.099 60.000 0.00 0.00 35.26 3.69
348 349 1.551099 CCTGAACCTGGTGAGAGAGGA 60.551 57.143 0.00 0.00 33.16 3.71
349 350 2.465813 CTGAACCTGGTGAGAGAGGAT 58.534 52.381 0.00 0.00 33.16 3.24
350 351 2.430332 CTGAACCTGGTGAGAGAGGATC 59.570 54.545 0.00 0.00 32.96 3.36
351 352 1.407258 GAACCTGGTGAGAGAGGATCG 59.593 57.143 0.00 0.00 42.67 3.69
352 353 0.626382 ACCTGGTGAGAGAGGATCGA 59.374 55.000 0.00 0.00 42.67 3.59
353 354 1.216678 ACCTGGTGAGAGAGGATCGAT 59.783 52.381 0.00 0.00 42.67 3.59
354 355 1.612950 CCTGGTGAGAGAGGATCGATG 59.387 57.143 0.54 0.00 42.67 3.84
355 356 2.580962 CTGGTGAGAGAGGATCGATGA 58.419 52.381 0.54 0.00 42.67 2.92
356 357 2.553602 CTGGTGAGAGAGGATCGATGAG 59.446 54.545 0.54 0.00 42.67 2.90
357 358 1.885887 GGTGAGAGAGGATCGATGAGG 59.114 57.143 0.54 0.00 42.67 3.86
358 359 1.885887 GTGAGAGAGGATCGATGAGGG 59.114 57.143 0.54 0.00 42.67 4.30
359 360 0.887933 GAGAGAGGATCGATGAGGGC 59.112 60.000 0.54 0.00 42.67 5.19
360 361 0.893270 AGAGAGGATCGATGAGGGCG 60.893 60.000 0.54 0.00 42.67 6.13
361 362 1.872197 GAGAGGATCGATGAGGGCGG 61.872 65.000 0.54 0.00 42.67 6.13
362 363 3.581687 GAGGATCGATGAGGGCGGC 62.582 68.421 0.54 0.00 0.00 6.53
379 380 3.176578 CGCGCTTTCGGTTCGCTA 61.177 61.111 5.56 0.00 45.87 4.26
380 381 2.722731 CGCGCTTTCGGTTCGCTAA 61.723 57.895 5.56 0.00 45.87 3.09
381 382 1.713830 GCGCTTTCGGTTCGCTAAT 59.286 52.632 0.00 0.00 44.79 1.73
382 383 0.315140 GCGCTTTCGGTTCGCTAATC 60.315 55.000 0.00 0.00 44.79 1.75
383 384 1.278238 CGCTTTCGGTTCGCTAATCT 58.722 50.000 0.00 0.00 0.00 2.40
384 385 2.456989 CGCTTTCGGTTCGCTAATCTA 58.543 47.619 0.00 0.00 0.00 1.98
385 386 2.468040 CGCTTTCGGTTCGCTAATCTAG 59.532 50.000 0.00 0.00 0.00 2.43
386 387 3.445857 GCTTTCGGTTCGCTAATCTAGT 58.554 45.455 0.00 0.00 0.00 2.57
387 388 3.864003 GCTTTCGGTTCGCTAATCTAGTT 59.136 43.478 0.00 0.00 0.00 2.24
388 389 4.259850 GCTTTCGGTTCGCTAATCTAGTTG 60.260 45.833 0.00 0.00 0.00 3.16
389 390 4.445452 TTCGGTTCGCTAATCTAGTTGT 57.555 40.909 0.00 0.00 0.00 3.32
390 391 5.565592 TTCGGTTCGCTAATCTAGTTGTA 57.434 39.130 0.00 0.00 0.00 2.41
391 392 4.913376 TCGGTTCGCTAATCTAGTTGTAC 58.087 43.478 0.00 0.00 0.00 2.90
392 393 4.637534 TCGGTTCGCTAATCTAGTTGTACT 59.362 41.667 0.00 0.00 0.00 2.73
393 394 5.124457 TCGGTTCGCTAATCTAGTTGTACTT 59.876 40.000 0.00 0.00 0.00 2.24
394 395 5.229469 CGGTTCGCTAATCTAGTTGTACTTG 59.771 44.000 0.00 0.00 0.00 3.16
395 396 6.098017 GGTTCGCTAATCTAGTTGTACTTGT 58.902 40.000 0.00 0.00 0.00 3.16
396 397 6.034683 GGTTCGCTAATCTAGTTGTACTTGTG 59.965 42.308 0.00 0.00 0.00 3.33
397 398 6.263516 TCGCTAATCTAGTTGTACTTGTGT 57.736 37.500 0.00 0.00 0.00 3.72
398 399 6.684686 TCGCTAATCTAGTTGTACTTGTGTT 58.315 36.000 0.00 0.00 0.00 3.32
399 400 6.805271 TCGCTAATCTAGTTGTACTTGTGTTC 59.195 38.462 0.00 0.00 0.00 3.18
400 401 6.807230 CGCTAATCTAGTTGTACTTGTGTTCT 59.193 38.462 0.00 0.00 0.00 3.01
401 402 7.328737 CGCTAATCTAGTTGTACTTGTGTTCTT 59.671 37.037 0.00 0.00 0.00 2.52
402 403 8.989980 GCTAATCTAGTTGTACTTGTGTTCTTT 58.010 33.333 0.00 0.00 0.00 2.52
404 405 8.732746 AATCTAGTTGTACTTGTGTTCTTTGT 57.267 30.769 0.00 0.00 0.00 2.83
405 406 9.826574 AATCTAGTTGTACTTGTGTTCTTTGTA 57.173 29.630 0.00 0.00 0.00 2.41
406 407 8.638685 TCTAGTTGTACTTGTGTTCTTTGTAC 57.361 34.615 0.00 0.00 35.43 2.90
407 408 8.472413 TCTAGTTGTACTTGTGTTCTTTGTACT 58.528 33.333 0.00 0.00 35.76 2.73
408 409 7.303634 AGTTGTACTTGTGTTCTTTGTACTG 57.696 36.000 0.00 0.00 35.76 2.74
409 410 5.728351 TGTACTTGTGTTCTTTGTACTGC 57.272 39.130 0.00 0.00 35.76 4.40
410 411 5.179533 TGTACTTGTGTTCTTTGTACTGCA 58.820 37.500 0.00 0.00 35.76 4.41
411 412 5.820423 TGTACTTGTGTTCTTTGTACTGCAT 59.180 36.000 0.00 0.00 35.76 3.96
412 413 5.424121 ACTTGTGTTCTTTGTACTGCATC 57.576 39.130 0.00 0.00 0.00 3.91
413 414 5.126067 ACTTGTGTTCTTTGTACTGCATCT 58.874 37.500 0.00 0.00 0.00 2.90
414 415 5.008019 ACTTGTGTTCTTTGTACTGCATCTG 59.992 40.000 0.00 0.00 0.00 2.90
415 416 4.702831 TGTGTTCTTTGTACTGCATCTGA 58.297 39.130 0.00 0.00 0.00 3.27
416 417 5.308014 TGTGTTCTTTGTACTGCATCTGAT 58.692 37.500 0.00 0.00 0.00 2.90
417 418 5.764686 TGTGTTCTTTGTACTGCATCTGATT 59.235 36.000 0.00 0.00 0.00 2.57
418 419 6.262944 TGTGTTCTTTGTACTGCATCTGATTT 59.737 34.615 0.00 0.00 0.00 2.17
419 420 7.141363 GTGTTCTTTGTACTGCATCTGATTTT 58.859 34.615 0.00 0.00 0.00 1.82
420 421 7.649306 GTGTTCTTTGTACTGCATCTGATTTTT 59.351 33.333 0.00 0.00 0.00 1.94
442 443 8.488651 TTTTTCCCGCAAAACTTATTTAAACA 57.511 26.923 0.00 0.00 33.47 2.83
443 444 8.488651 TTTTCCCGCAAAACTTATTTAAACAA 57.511 26.923 0.00 0.00 0.00 2.83
444 445 8.488651 TTTCCCGCAAAACTTATTTAAACAAA 57.511 26.923 0.00 0.00 0.00 2.83
445 446 8.664211 TTCCCGCAAAACTTATTTAAACAAAT 57.336 26.923 0.00 0.00 0.00 2.32
446 447 8.664211 TCCCGCAAAACTTATTTAAACAAATT 57.336 26.923 0.00 0.00 0.00 1.82
447 448 8.552034 TCCCGCAAAACTTATTTAAACAAATTG 58.448 29.630 0.00 0.00 0.00 2.32
448 449 8.338986 CCCGCAAAACTTATTTAAACAAATTGT 58.661 29.630 0.00 0.00 0.00 2.71
449 450 9.709600 CCGCAAAACTTATTTAAACAAATTGTT 57.290 25.926 5.41 5.41 43.41 2.83
464 465 6.847400 ACAAATTGTTGTTTAGTTTTTGGCC 58.153 32.000 0.00 0.00 46.01 5.36
465 466 6.657117 ACAAATTGTTGTTTAGTTTTTGGCCT 59.343 30.769 3.32 0.00 46.01 5.19
466 467 6.676237 AATTGTTGTTTAGTTTTTGGCCTG 57.324 33.333 3.32 0.00 0.00 4.85
467 468 4.810191 TGTTGTTTAGTTTTTGGCCTGT 57.190 36.364 3.32 0.00 0.00 4.00
468 469 5.153950 TGTTGTTTAGTTTTTGGCCTGTT 57.846 34.783 3.32 0.00 0.00 3.16
469 470 5.172205 TGTTGTTTAGTTTTTGGCCTGTTC 58.828 37.500 3.32 0.00 0.00 3.18
470 471 4.035278 TGTTTAGTTTTTGGCCTGTTCG 57.965 40.909 3.32 0.00 0.00 3.95
471 472 3.695060 TGTTTAGTTTTTGGCCTGTTCGA 59.305 39.130 3.32 0.00 0.00 3.71
472 473 4.339814 TGTTTAGTTTTTGGCCTGTTCGAT 59.660 37.500 3.32 0.00 0.00 3.59
473 474 4.497473 TTAGTTTTTGGCCTGTTCGATG 57.503 40.909 3.32 0.00 0.00 3.84
474 475 2.306847 AGTTTTTGGCCTGTTCGATGT 58.693 42.857 3.32 0.00 0.00 3.06
475 476 3.482436 AGTTTTTGGCCTGTTCGATGTA 58.518 40.909 3.32 0.00 0.00 2.29
476 477 3.252458 AGTTTTTGGCCTGTTCGATGTAC 59.748 43.478 3.32 0.00 0.00 2.90
477 478 1.434555 TTTGGCCTGTTCGATGTACG 58.565 50.000 3.32 0.00 44.09 3.67
491 492 5.705902 TCGATGTACGATGACAGAAAAAGA 58.294 37.500 0.00 0.00 46.45 2.52
492 493 5.800438 TCGATGTACGATGACAGAAAAAGAG 59.200 40.000 0.00 0.00 46.45 2.85
493 494 5.800438 CGATGTACGATGACAGAAAAAGAGA 59.200 40.000 0.00 0.00 45.77 3.10
494 495 6.308041 CGATGTACGATGACAGAAAAAGAGAA 59.692 38.462 0.00 0.00 45.77 2.87
495 496 7.148804 CGATGTACGATGACAGAAAAAGAGAAA 60.149 37.037 0.00 0.00 45.77 2.52
496 497 7.173863 TGTACGATGACAGAAAAAGAGAAAC 57.826 36.000 0.00 0.00 0.00 2.78
497 498 6.984474 TGTACGATGACAGAAAAAGAGAAACT 59.016 34.615 0.00 0.00 0.00 2.66
498 499 6.292389 ACGATGACAGAAAAAGAGAAACTG 57.708 37.500 0.00 0.00 35.14 3.16
499 500 5.817816 ACGATGACAGAAAAAGAGAAACTGT 59.182 36.000 0.00 0.00 43.10 3.55
500 501 6.132056 CGATGACAGAAAAAGAGAAACTGTG 58.868 40.000 0.00 0.00 41.01 3.66
501 502 5.235305 TGACAGAAAAAGAGAAACTGTGC 57.765 39.130 0.00 0.00 41.01 4.57
502 503 4.699735 TGACAGAAAAAGAGAAACTGTGCA 59.300 37.500 0.00 0.00 41.01 4.57
503 504 5.357878 TGACAGAAAAAGAGAAACTGTGCAT 59.642 36.000 0.00 0.00 41.01 3.96
504 505 6.127647 TGACAGAAAAAGAGAAACTGTGCATT 60.128 34.615 0.00 0.00 41.01 3.56
505 506 6.633856 ACAGAAAAAGAGAAACTGTGCATTT 58.366 32.000 0.00 0.00 39.76 2.32
506 507 7.771183 ACAGAAAAAGAGAAACTGTGCATTTA 58.229 30.769 0.00 0.00 39.76 1.40
507 508 8.416329 ACAGAAAAAGAGAAACTGTGCATTTAT 58.584 29.630 0.00 0.00 39.76 1.40
508 509 9.897744 CAGAAAAAGAGAAACTGTGCATTTATA 57.102 29.630 0.00 0.00 0.00 0.98
509 510 9.899226 AGAAAAAGAGAAACTGTGCATTTATAC 57.101 29.630 0.00 0.00 0.00 1.47
510 511 9.677567 GAAAAAGAGAAACTGTGCATTTATACA 57.322 29.630 0.00 0.00 0.00 2.29
538 539 9.744468 GTGGAGTAATGAGTAAAATGTGTTTTT 57.256 29.630 0.00 0.00 40.59 1.94
623 624 3.656045 GCAACAACGGGGTGGTCG 61.656 66.667 0.00 0.00 0.00 4.79
639 641 1.131315 GGTCGAGCCAATTTGAGCTTC 59.869 52.381 2.39 7.46 40.11 3.86
665 667 0.028902 GCAACGTCGGGATAATTGCC 59.971 55.000 5.04 0.00 39.78 4.52
671 673 2.260869 CGGGATAATTGCCCCAGCG 61.261 63.158 14.83 1.14 42.92 5.18
688 690 2.943843 GCGGTAGCGTCATAAATTCC 57.056 50.000 16.63 0.00 0.00 3.01
950 974 1.838073 AAACCCCGCGACCATCTCTT 61.838 55.000 8.23 0.00 0.00 2.85
951 975 2.107141 CCCCGCGACCATCTCTTC 59.893 66.667 8.23 0.00 0.00 2.87
952 976 2.427245 CCCCGCGACCATCTCTTCT 61.427 63.158 8.23 0.00 0.00 2.85
967 991 3.835395 TCTCTTCTTCTTCTTCCCCACTC 59.165 47.826 0.00 0.00 0.00 3.51
1047 1071 4.314440 GCCACCGACAGCTCCACA 62.314 66.667 0.00 0.00 0.00 4.17
1191 1215 4.452733 CTCCGCCCCTCGTCAACC 62.453 72.222 0.00 0.00 36.19 3.77
1196 1220 4.452733 CCCCTCGTCAACCGCCTC 62.453 72.222 0.00 0.00 36.19 4.70
1197 1221 4.452733 CCCTCGTCAACCGCCTCC 62.453 72.222 0.00 0.00 36.19 4.30
1198 1222 4.796231 CCTCGTCAACCGCCTCCG 62.796 72.222 0.00 0.00 36.19 4.63
1224 1248 2.113139 CCCACCGTTGTCCTGCTT 59.887 61.111 0.00 0.00 0.00 3.91
1743 1767 2.202892 GGACTCGCGGATGGGAAC 60.203 66.667 6.13 0.00 36.52 3.62
1745 1769 3.352338 GACTCGCGGATGGGAACGT 62.352 63.158 6.13 0.00 36.52 3.99
1817 1841 0.742281 CTGTCCATCACCAAGGCGAG 60.742 60.000 0.00 0.00 0.00 5.03
1848 1872 6.312399 TCTTGTGTAAAGATCGTGCATTTT 57.688 33.333 0.00 0.00 0.00 1.82
1947 1972 7.955864 AGACGCTTAATTCGAAACAAATAACTC 59.044 33.333 0.00 0.00 0.00 3.01
1950 1975 7.046442 CGCTTAATTCGAAACAAATAACTCGTC 60.046 37.037 0.00 0.00 33.15 4.20
1964 1989 7.392494 AATAACTCGTCTGTACAGATCTCAA 57.608 36.000 27.54 12.82 39.97 3.02
1969 1994 3.692101 CGTCTGTACAGATCTCAAGGAGT 59.308 47.826 27.54 0.00 39.97 3.85
2019 2071 5.872635 AGAGTATTTGATCGTGCATTTGTG 58.127 37.500 0.00 0.00 0.00 3.33
2140 2192 0.178967 TTGCTGGAATCTTGCCACCA 60.179 50.000 0.00 0.00 0.00 4.17
2143 2195 3.963733 TGGAATCTTGCCACCAGAG 57.036 52.632 0.00 0.00 0.00 3.35
2144 2196 1.361204 TGGAATCTTGCCACCAGAGA 58.639 50.000 0.00 0.00 0.00 3.10
2147 2199 3.245371 TGGAATCTTGCCACCAGAGAAAT 60.245 43.478 0.00 0.00 0.00 2.17
2148 2200 3.766051 GGAATCTTGCCACCAGAGAAATT 59.234 43.478 0.00 0.00 0.00 1.82
2149 2201 4.142293 GGAATCTTGCCACCAGAGAAATTC 60.142 45.833 0.00 0.00 0.00 2.17
2286 2338 3.026630 ACACGACTAATCCACACACAG 57.973 47.619 0.00 0.00 0.00 3.66
2329 2381 1.865865 TTCCAGCACGTGAACTCTTC 58.134 50.000 22.23 0.00 0.00 2.87
2727 2796 4.047822 CGTCTACCTCCTGTACTACGTAG 58.952 52.174 20.97 20.97 32.77 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.973835 ACACAAAAATCTAAACGAACTCAAAA 57.026 26.923 0.00 0.00 0.00 2.44
1 2 9.493206 GTACACAAAAATCTAAACGAACTCAAA 57.507 29.630 0.00 0.00 0.00 2.69
2 3 8.885722 AGTACACAAAAATCTAAACGAACTCAA 58.114 29.630 0.00 0.00 0.00 3.02
3 4 8.332464 CAGTACACAAAAATCTAAACGAACTCA 58.668 33.333 0.00 0.00 0.00 3.41
4 5 8.333186 ACAGTACACAAAAATCTAAACGAACTC 58.667 33.333 0.00 0.00 0.00 3.01
5 6 8.205131 ACAGTACACAAAAATCTAAACGAACT 57.795 30.769 0.00 0.00 0.00 3.01
6 7 8.831000 AACAGTACACAAAAATCTAAACGAAC 57.169 30.769 0.00 0.00 0.00 3.95
9 10 9.377383 CCTAAACAGTACACAAAAATCTAAACG 57.623 33.333 0.00 0.00 0.00 3.60
13 14 9.280174 CCTTCCTAAACAGTACACAAAAATCTA 57.720 33.333 0.00 0.00 0.00 1.98
14 15 7.255486 GCCTTCCTAAACAGTACACAAAAATCT 60.255 37.037 0.00 0.00 0.00 2.40
15 16 6.861572 GCCTTCCTAAACAGTACACAAAAATC 59.138 38.462 0.00 0.00 0.00 2.17
16 17 6.322712 TGCCTTCCTAAACAGTACACAAAAAT 59.677 34.615 0.00 0.00 0.00 1.82
17 18 5.652891 TGCCTTCCTAAACAGTACACAAAAA 59.347 36.000 0.00 0.00 0.00 1.94
18 19 5.194432 TGCCTTCCTAAACAGTACACAAAA 58.806 37.500 0.00 0.00 0.00 2.44
19 20 4.783055 TGCCTTCCTAAACAGTACACAAA 58.217 39.130 0.00 0.00 0.00 2.83
20 21 4.425180 TGCCTTCCTAAACAGTACACAA 57.575 40.909 0.00 0.00 0.00 3.33
21 22 4.385825 CTTGCCTTCCTAAACAGTACACA 58.614 43.478 0.00 0.00 0.00 3.72
22 23 3.751698 CCTTGCCTTCCTAAACAGTACAC 59.248 47.826 0.00 0.00 0.00 2.90
23 24 3.809324 GCCTTGCCTTCCTAAACAGTACA 60.809 47.826 0.00 0.00 0.00 2.90
24 25 2.747989 GCCTTGCCTTCCTAAACAGTAC 59.252 50.000 0.00 0.00 0.00 2.73
25 26 2.373836 TGCCTTGCCTTCCTAAACAGTA 59.626 45.455 0.00 0.00 0.00 2.74
26 27 1.144913 TGCCTTGCCTTCCTAAACAGT 59.855 47.619 0.00 0.00 0.00 3.55
27 28 1.909700 TGCCTTGCCTTCCTAAACAG 58.090 50.000 0.00 0.00 0.00 3.16
28 29 1.960689 GTTGCCTTGCCTTCCTAAACA 59.039 47.619 0.00 0.00 0.00 2.83
29 30 1.068541 CGTTGCCTTGCCTTCCTAAAC 60.069 52.381 0.00 0.00 0.00 2.01
30 31 1.202830 TCGTTGCCTTGCCTTCCTAAA 60.203 47.619 0.00 0.00 0.00 1.85
31 32 0.398696 TCGTTGCCTTGCCTTCCTAA 59.601 50.000 0.00 0.00 0.00 2.69
32 33 0.321298 GTCGTTGCCTTGCCTTCCTA 60.321 55.000 0.00 0.00 0.00 2.94
33 34 1.600916 GTCGTTGCCTTGCCTTCCT 60.601 57.895 0.00 0.00 0.00 3.36
34 35 2.954611 GTCGTTGCCTTGCCTTCC 59.045 61.111 0.00 0.00 0.00 3.46
35 36 1.959226 TCGTCGTTGCCTTGCCTTC 60.959 57.895 0.00 0.00 0.00 3.46
36 37 2.110213 TCGTCGTTGCCTTGCCTT 59.890 55.556 0.00 0.00 0.00 4.35
37 38 2.665185 GTCGTCGTTGCCTTGCCT 60.665 61.111 0.00 0.00 0.00 4.75
38 39 4.072088 CGTCGTCGTTGCCTTGCC 62.072 66.667 0.00 0.00 0.00 4.52
39 40 3.033764 TCGTCGTCGTTGCCTTGC 61.034 61.111 1.33 0.00 38.33 4.01
40 41 1.606350 GAGTCGTCGTCGTTGCCTTG 61.606 60.000 1.33 0.00 38.33 3.61
41 42 1.371389 GAGTCGTCGTCGTTGCCTT 60.371 57.895 1.33 0.00 38.33 4.35
42 43 2.185103 GAGAGTCGTCGTCGTTGCCT 62.185 60.000 1.33 0.00 38.33 4.75
43 44 1.796749 GAGAGTCGTCGTCGTTGCC 60.797 63.158 1.33 0.00 38.33 4.52
44 45 0.441533 TAGAGAGTCGTCGTCGTTGC 59.558 55.000 1.33 0.00 38.33 4.17
45 46 2.869358 TTAGAGAGTCGTCGTCGTTG 57.131 50.000 1.33 0.00 38.33 4.10
46 47 3.062763 TCTTTAGAGAGTCGTCGTCGTT 58.937 45.455 1.33 0.00 38.33 3.85
47 48 2.681706 TCTTTAGAGAGTCGTCGTCGT 58.318 47.619 1.33 0.00 38.33 4.34
48 49 3.306434 TCATCTTTAGAGAGTCGTCGTCG 59.694 47.826 0.00 0.00 34.85 5.12
49 50 4.861389 TCATCTTTAGAGAGTCGTCGTC 57.139 45.455 0.00 0.00 34.85 4.20
50 51 5.048921 TGTTTCATCTTTAGAGAGTCGTCGT 60.049 40.000 0.00 0.00 34.85 4.34
51 52 5.391449 TGTTTCATCTTTAGAGAGTCGTCG 58.609 41.667 0.00 0.00 34.85 5.12
52 53 7.382759 ACTTTGTTTCATCTTTAGAGAGTCGTC 59.617 37.037 0.00 0.00 34.85 4.20
53 54 7.210873 ACTTTGTTTCATCTTTAGAGAGTCGT 58.789 34.615 0.00 0.00 34.85 4.34
54 55 7.644986 ACTTTGTTTCATCTTTAGAGAGTCG 57.355 36.000 0.00 0.00 34.85 4.18
55 56 9.267084 AGAACTTTGTTTCATCTTTAGAGAGTC 57.733 33.333 0.00 0.00 34.85 3.36
56 57 9.267084 GAGAACTTTGTTTCATCTTTAGAGAGT 57.733 33.333 0.00 0.00 34.85 3.24
57 58 8.716909 GGAGAACTTTGTTTCATCTTTAGAGAG 58.283 37.037 0.00 0.00 34.85 3.20
58 59 8.432805 AGGAGAACTTTGTTTCATCTTTAGAGA 58.567 33.333 0.00 0.00 36.09 3.10
59 60 8.614469 AGGAGAACTTTGTTTCATCTTTAGAG 57.386 34.615 0.00 0.00 0.00 2.43
60 61 7.385205 CGAGGAGAACTTTGTTTCATCTTTAGA 59.615 37.037 0.00 0.00 0.00 2.10
61 62 7.171678 ACGAGGAGAACTTTGTTTCATCTTTAG 59.828 37.037 0.00 0.00 0.00 1.85
62 63 6.990349 ACGAGGAGAACTTTGTTTCATCTTTA 59.010 34.615 0.00 0.00 0.00 1.85
63 64 5.823045 ACGAGGAGAACTTTGTTTCATCTTT 59.177 36.000 0.00 0.00 0.00 2.52
64 65 5.368989 ACGAGGAGAACTTTGTTTCATCTT 58.631 37.500 0.00 0.00 0.00 2.40
65 66 4.962155 ACGAGGAGAACTTTGTTTCATCT 58.038 39.130 0.00 0.00 0.00 2.90
66 67 5.674933 AACGAGGAGAACTTTGTTTCATC 57.325 39.130 0.00 0.00 0.00 2.92
67 68 6.766467 ACTAAACGAGGAGAACTTTGTTTCAT 59.234 34.615 0.00 0.00 38.34 2.57
68 69 6.110707 ACTAAACGAGGAGAACTTTGTTTCA 58.889 36.000 0.00 0.00 38.34 2.69
69 70 6.600246 ACTAAACGAGGAGAACTTTGTTTC 57.400 37.500 0.00 0.00 38.34 2.78
70 71 6.481313 GGTACTAAACGAGGAGAACTTTGTTT 59.519 38.462 0.00 0.00 39.67 2.83
71 72 5.987953 GGTACTAAACGAGGAGAACTTTGTT 59.012 40.000 0.00 0.00 31.79 2.83
72 73 5.303845 AGGTACTAAACGAGGAGAACTTTGT 59.696 40.000 0.00 0.00 36.02 2.83
73 74 5.634020 CAGGTACTAAACGAGGAGAACTTTG 59.366 44.000 0.00 0.00 36.02 2.77
74 75 5.303845 ACAGGTACTAAACGAGGAGAACTTT 59.696 40.000 0.00 0.00 36.02 2.66
75 76 4.831710 ACAGGTACTAAACGAGGAGAACTT 59.168 41.667 0.00 0.00 36.02 2.66
76 77 4.405548 ACAGGTACTAAACGAGGAGAACT 58.594 43.478 0.00 0.00 36.02 3.01
77 78 4.380339 GGACAGGTACTAAACGAGGAGAAC 60.380 50.000 0.00 0.00 36.02 3.01
78 79 3.760684 GGACAGGTACTAAACGAGGAGAA 59.239 47.826 0.00 0.00 36.02 2.87
79 80 3.009916 AGGACAGGTACTAAACGAGGAGA 59.990 47.826 0.00 0.00 36.02 3.71
80 81 3.128938 CAGGACAGGTACTAAACGAGGAG 59.871 52.174 0.00 0.00 36.02 3.69
81 82 3.087031 CAGGACAGGTACTAAACGAGGA 58.913 50.000 0.00 0.00 36.02 3.71
82 83 3.087031 TCAGGACAGGTACTAAACGAGG 58.913 50.000 0.00 0.00 36.02 4.63
83 84 3.425892 CGTCAGGACAGGTACTAAACGAG 60.426 52.174 11.32 0.00 36.02 4.18
84 85 2.485426 CGTCAGGACAGGTACTAAACGA 59.515 50.000 11.32 0.00 36.02 3.85
85 86 2.485426 TCGTCAGGACAGGTACTAAACG 59.515 50.000 10.77 10.77 36.02 3.60
86 87 4.421948 CATCGTCAGGACAGGTACTAAAC 58.578 47.826 0.00 0.00 36.02 2.01
87 88 3.119245 GCATCGTCAGGACAGGTACTAAA 60.119 47.826 0.00 0.00 36.02 1.85
88 89 2.426024 GCATCGTCAGGACAGGTACTAA 59.574 50.000 0.00 0.00 36.02 2.24
89 90 2.022195 GCATCGTCAGGACAGGTACTA 58.978 52.381 0.00 0.00 36.02 1.82
90 91 0.818296 GCATCGTCAGGACAGGTACT 59.182 55.000 0.00 0.00 43.88 2.73
91 92 0.530744 TGCATCGTCAGGACAGGTAC 59.469 55.000 0.00 0.00 0.00 3.34
92 93 1.409064 GATGCATCGTCAGGACAGGTA 59.591 52.381 11.68 0.00 0.00 3.08
93 94 0.176680 GATGCATCGTCAGGACAGGT 59.823 55.000 11.68 0.00 0.00 4.00
94 95 0.873312 CGATGCATCGTCAGGACAGG 60.873 60.000 35.19 8.55 44.74 4.00
95 96 2.586418 CGATGCATCGTCAGGACAG 58.414 57.895 35.19 9.26 44.74 3.51
96 97 4.812814 CGATGCATCGTCAGGACA 57.187 55.556 35.19 0.00 44.74 4.02
105 106 0.772926 CTAACGACGCTCGATGCATC 59.227 55.000 17.10 17.10 43.74 3.91
106 107 0.380733 TCTAACGACGCTCGATGCAT 59.619 50.000 0.00 0.00 43.74 3.96
107 108 0.248094 CTCTAACGACGCTCGATGCA 60.248 55.000 13.06 0.00 43.74 3.96
108 109 0.930742 CCTCTAACGACGCTCGATGC 60.931 60.000 13.06 0.00 43.74 3.91
109 110 0.317103 CCCTCTAACGACGCTCGATG 60.317 60.000 13.06 4.42 43.74 3.84
110 111 2.023318 CCCTCTAACGACGCTCGAT 58.977 57.895 13.06 5.20 43.74 3.59
111 112 2.758089 GCCCTCTAACGACGCTCGA 61.758 63.158 13.06 0.00 43.74 4.04
112 113 2.278013 GCCCTCTAACGACGCTCG 60.278 66.667 0.00 5.97 46.93 5.03
113 114 0.872021 CATGCCCTCTAACGACGCTC 60.872 60.000 0.00 0.00 0.00 5.03
114 115 1.141881 CATGCCCTCTAACGACGCT 59.858 57.895 0.00 0.00 0.00 5.07
115 116 1.153628 ACATGCCCTCTAACGACGC 60.154 57.895 0.00 0.00 0.00 5.19
116 117 0.172578 TCACATGCCCTCTAACGACG 59.827 55.000 0.00 0.00 0.00 5.12
117 118 2.094182 TCTTCACATGCCCTCTAACGAC 60.094 50.000 0.00 0.00 0.00 4.34
118 119 2.176045 TCTTCACATGCCCTCTAACGA 58.824 47.619 0.00 0.00 0.00 3.85
119 120 2.672961 TCTTCACATGCCCTCTAACG 57.327 50.000 0.00 0.00 0.00 3.18
120 121 3.624861 CACATCTTCACATGCCCTCTAAC 59.375 47.826 0.00 0.00 0.00 2.34
121 122 3.264193 ACACATCTTCACATGCCCTCTAA 59.736 43.478 0.00 0.00 0.00 2.10
122 123 2.840038 ACACATCTTCACATGCCCTCTA 59.160 45.455 0.00 0.00 0.00 2.43
123 124 1.632409 ACACATCTTCACATGCCCTCT 59.368 47.619 0.00 0.00 0.00 3.69
124 125 2.012673 GACACATCTTCACATGCCCTC 58.987 52.381 0.00 0.00 0.00 4.30
125 126 1.632409 AGACACATCTTCACATGCCCT 59.368 47.619 0.00 0.00 0.00 5.19
126 127 2.119801 AGACACATCTTCACATGCCC 57.880 50.000 0.00 0.00 0.00 5.36
136 137 1.335964 CGTCACACCGAAGACACATCT 60.336 52.381 0.00 0.00 36.42 2.90
137 138 1.060713 CGTCACACCGAAGACACATC 58.939 55.000 0.00 0.00 34.48 3.06
138 139 0.319555 CCGTCACACCGAAGACACAT 60.320 55.000 0.00 0.00 34.48 3.21
139 140 1.066752 CCGTCACACCGAAGACACA 59.933 57.895 0.00 0.00 34.48 3.72
140 141 0.938168 GACCGTCACACCGAAGACAC 60.938 60.000 0.00 0.00 34.48 3.67
141 142 1.105167 AGACCGTCACACCGAAGACA 61.105 55.000 0.40 0.00 34.48 3.41
142 143 0.031721 AAGACCGTCACACCGAAGAC 59.968 55.000 0.40 0.00 0.00 3.01
143 144 0.031585 CAAGACCGTCACACCGAAGA 59.968 55.000 0.40 0.00 0.00 2.87
144 145 0.944311 CCAAGACCGTCACACCGAAG 60.944 60.000 0.40 0.00 0.00 3.79
145 146 1.068417 CCAAGACCGTCACACCGAA 59.932 57.895 0.40 0.00 0.00 4.30
146 147 2.732016 CCAAGACCGTCACACCGA 59.268 61.111 0.40 0.00 0.00 4.69
147 148 2.357034 CCCAAGACCGTCACACCG 60.357 66.667 0.40 0.00 0.00 4.94
148 149 1.597027 CACCCAAGACCGTCACACC 60.597 63.158 0.40 0.00 0.00 4.16
149 150 1.597027 CCACCCAAGACCGTCACAC 60.597 63.158 0.40 0.00 0.00 3.82
150 151 1.125093 ATCCACCCAAGACCGTCACA 61.125 55.000 0.40 0.00 0.00 3.58
151 152 0.036306 AATCCACCCAAGACCGTCAC 59.964 55.000 0.40 0.00 0.00 3.67
152 153 0.036164 CAATCCACCCAAGACCGTCA 59.964 55.000 0.40 0.00 0.00 4.35
153 154 0.676782 CCAATCCACCCAAGACCGTC 60.677 60.000 0.00 0.00 0.00 4.79
154 155 1.378762 CCAATCCACCCAAGACCGT 59.621 57.895 0.00 0.00 0.00 4.83
155 156 0.251165 AACCAATCCACCCAAGACCG 60.251 55.000 0.00 0.00 0.00 4.79
156 157 1.618343 CAAACCAATCCACCCAAGACC 59.382 52.381 0.00 0.00 0.00 3.85
157 158 1.618343 CCAAACCAATCCACCCAAGAC 59.382 52.381 0.00 0.00 0.00 3.01
158 159 1.501170 TCCAAACCAATCCACCCAAGA 59.499 47.619 0.00 0.00 0.00 3.02
159 160 2.008242 TCCAAACCAATCCACCCAAG 57.992 50.000 0.00 0.00 0.00 3.61
160 161 2.534990 GATCCAAACCAATCCACCCAA 58.465 47.619 0.00 0.00 0.00 4.12
161 162 1.272985 GGATCCAAACCAATCCACCCA 60.273 52.381 6.95 0.00 41.02 4.51
162 163 1.272985 TGGATCCAAACCAATCCACCC 60.273 52.381 13.46 0.00 45.05 4.61
163 164 2.102578 CTGGATCCAAACCAATCCACC 58.897 52.381 17.00 0.00 45.05 4.61
164 165 2.755103 GACTGGATCCAAACCAATCCAC 59.245 50.000 17.00 0.00 45.05 4.02
166 167 3.372440 AGACTGGATCCAAACCAATCC 57.628 47.619 17.00 0.00 41.60 3.01
167 168 7.410120 AATAAAGACTGGATCCAAACCAATC 57.590 36.000 17.00 6.77 36.95 2.67
168 169 7.235399 ACAAATAAAGACTGGATCCAAACCAAT 59.765 33.333 17.00 2.78 36.95 3.16
169 170 6.553100 ACAAATAAAGACTGGATCCAAACCAA 59.447 34.615 17.00 0.26 36.95 3.67
170 171 6.074648 ACAAATAAAGACTGGATCCAAACCA 58.925 36.000 17.00 0.00 35.96 3.67
171 172 6.434340 AGACAAATAAAGACTGGATCCAAACC 59.566 38.462 17.00 7.69 0.00 3.27
172 173 7.454260 AGACAAATAAAGACTGGATCCAAAC 57.546 36.000 17.00 12.41 0.00 2.93
173 174 7.723616 TGAAGACAAATAAAGACTGGATCCAAA 59.276 33.333 17.00 0.00 0.00 3.28
174 175 7.230747 TGAAGACAAATAAAGACTGGATCCAA 58.769 34.615 17.00 0.00 0.00 3.53
175 176 6.778821 TGAAGACAAATAAAGACTGGATCCA 58.221 36.000 15.27 15.27 0.00 3.41
176 177 7.872113 ATGAAGACAAATAAAGACTGGATCC 57.128 36.000 4.20 4.20 0.00 3.36
177 178 9.565213 CAAATGAAGACAAATAAAGACTGGATC 57.435 33.333 0.00 0.00 0.00 3.36
178 179 9.082313 ACAAATGAAGACAAATAAAGACTGGAT 57.918 29.630 0.00 0.00 0.00 3.41
179 180 8.352201 CACAAATGAAGACAAATAAAGACTGGA 58.648 33.333 0.00 0.00 0.00 3.86
180 181 8.137437 ACACAAATGAAGACAAATAAAGACTGG 58.863 33.333 0.00 0.00 0.00 4.00
188 189 9.733556 ACCTGTATACACAAATGAAGACAAATA 57.266 29.630 0.08 0.00 33.22 1.40
189 190 8.635765 ACCTGTATACACAAATGAAGACAAAT 57.364 30.769 0.08 0.00 33.22 2.32
190 191 8.458573 AACCTGTATACACAAATGAAGACAAA 57.541 30.769 0.08 0.00 33.22 2.83
191 192 9.214957 CTAACCTGTATACACAAATGAAGACAA 57.785 33.333 0.08 0.00 33.22 3.18
192 193 8.590204 TCTAACCTGTATACACAAATGAAGACA 58.410 33.333 0.08 0.00 33.22 3.41
193 194 8.997621 TCTAACCTGTATACACAAATGAAGAC 57.002 34.615 0.08 0.00 33.22 3.01
194 195 9.817809 GATCTAACCTGTATACACAAATGAAGA 57.182 33.333 0.08 0.01 33.22 2.87
195 196 9.046296 GGATCTAACCTGTATACACAAATGAAG 57.954 37.037 0.08 0.00 33.22 3.02
196 197 8.768397 AGGATCTAACCTGTATACACAAATGAA 58.232 33.333 0.08 0.00 39.01 2.57
197 198 8.319057 AGGATCTAACCTGTATACACAAATGA 57.681 34.615 0.08 0.00 39.01 2.57
198 199 8.964476 AAGGATCTAACCTGTATACACAAATG 57.036 34.615 0.08 0.00 40.49 2.32
199 200 9.614792 GAAAGGATCTAACCTGTATACACAAAT 57.385 33.333 0.08 0.00 40.49 2.32
200 201 7.762615 CGAAAGGATCTAACCTGTATACACAAA 59.237 37.037 0.08 0.00 40.49 2.83
201 202 7.123098 TCGAAAGGATCTAACCTGTATACACAA 59.877 37.037 0.08 0.00 40.49 3.33
202 203 6.604396 TCGAAAGGATCTAACCTGTATACACA 59.396 38.462 0.08 0.00 40.49 3.72
203 204 7.035840 TCGAAAGGATCTAACCTGTATACAC 57.964 40.000 0.08 0.00 40.49 2.90
204 205 7.834881 ATCGAAAGGATCTAACCTGTATACA 57.165 36.000 5.25 5.25 40.49 2.29
218 219 7.386851 TGAAAAGAAGTGTAGATCGAAAGGAT 58.613 34.615 0.00 0.00 38.35 3.24
219 220 6.755206 TGAAAAGAAGTGTAGATCGAAAGGA 58.245 36.000 0.00 0.00 0.00 3.36
220 221 7.331934 TCATGAAAAGAAGTGTAGATCGAAAGG 59.668 37.037 0.00 0.00 0.00 3.11
221 222 8.244494 TCATGAAAAGAAGTGTAGATCGAAAG 57.756 34.615 0.00 0.00 0.00 2.62
222 223 7.148573 GCTCATGAAAAGAAGTGTAGATCGAAA 60.149 37.037 0.00 0.00 0.00 3.46
223 224 6.311445 GCTCATGAAAAGAAGTGTAGATCGAA 59.689 38.462 0.00 0.00 0.00 3.71
224 225 5.807520 GCTCATGAAAAGAAGTGTAGATCGA 59.192 40.000 0.00 0.00 0.00 3.59
225 226 5.578336 TGCTCATGAAAAGAAGTGTAGATCG 59.422 40.000 0.00 0.00 0.00 3.69
226 227 6.974932 TGCTCATGAAAAGAAGTGTAGATC 57.025 37.500 0.00 0.00 0.00 2.75
227 228 7.934855 ATTGCTCATGAAAAGAAGTGTAGAT 57.065 32.000 0.00 0.00 0.00 1.98
228 229 8.097038 ACTATTGCTCATGAAAAGAAGTGTAGA 58.903 33.333 0.00 0.00 0.00 2.59
229 230 8.261492 ACTATTGCTCATGAAAAGAAGTGTAG 57.739 34.615 0.00 0.00 0.00 2.74
230 231 8.506437 CAACTATTGCTCATGAAAAGAAGTGTA 58.494 33.333 0.00 0.00 0.00 2.90
231 232 7.013655 ACAACTATTGCTCATGAAAAGAAGTGT 59.986 33.333 0.00 0.00 0.00 3.55
232 233 7.365741 ACAACTATTGCTCATGAAAAGAAGTG 58.634 34.615 0.00 0.00 0.00 3.16
233 234 7.516198 ACAACTATTGCTCATGAAAAGAAGT 57.484 32.000 0.00 0.65 0.00 3.01
234 235 7.864379 ACAACAACTATTGCTCATGAAAAGAAG 59.136 33.333 0.00 0.07 32.47 2.85
235 236 7.715657 ACAACAACTATTGCTCATGAAAAGAA 58.284 30.769 0.00 0.00 32.47 2.52
236 237 7.275888 ACAACAACTATTGCTCATGAAAAGA 57.724 32.000 0.00 0.00 32.47 2.52
237 238 7.864379 AGAACAACAACTATTGCTCATGAAAAG 59.136 33.333 0.00 0.00 32.47 2.27
238 239 7.648908 CAGAACAACAACTATTGCTCATGAAAA 59.351 33.333 0.00 0.00 32.47 2.29
239 240 7.013178 TCAGAACAACAACTATTGCTCATGAAA 59.987 33.333 0.00 0.00 32.47 2.69
240 241 6.486320 TCAGAACAACAACTATTGCTCATGAA 59.514 34.615 0.00 0.00 32.47 2.57
241 242 5.997129 TCAGAACAACAACTATTGCTCATGA 59.003 36.000 0.00 0.00 32.47 3.07
242 243 6.245115 TCAGAACAACAACTATTGCTCATG 57.755 37.500 0.00 0.00 32.47 3.07
243 244 6.656270 TCATCAGAACAACAACTATTGCTCAT 59.344 34.615 0.00 0.00 32.47 2.90
244 245 5.997129 TCATCAGAACAACAACTATTGCTCA 59.003 36.000 0.00 0.00 32.47 4.26
245 246 6.486253 TCATCAGAACAACAACTATTGCTC 57.514 37.500 0.00 0.00 32.47 4.26
246 247 6.882610 TTCATCAGAACAACAACTATTGCT 57.117 33.333 0.00 0.00 32.47 3.91
247 248 7.062605 CCAATTCATCAGAACAACAACTATTGC 59.937 37.037 0.00 0.00 36.39 3.56
248 249 8.084073 ACCAATTCATCAGAACAACAACTATTG 58.916 33.333 0.00 0.00 36.39 1.90
249 250 8.181904 ACCAATTCATCAGAACAACAACTATT 57.818 30.769 0.00 0.00 36.39 1.73
250 251 7.448161 TGACCAATTCATCAGAACAACAACTAT 59.552 33.333 0.00 0.00 36.39 2.12
251 252 6.770303 TGACCAATTCATCAGAACAACAACTA 59.230 34.615 0.00 0.00 36.39 2.24
252 253 5.593909 TGACCAATTCATCAGAACAACAACT 59.406 36.000 0.00 0.00 36.39 3.16
253 254 5.830912 TGACCAATTCATCAGAACAACAAC 58.169 37.500 0.00 0.00 36.39 3.32
254 255 6.040729 ACATGACCAATTCATCAGAACAACAA 59.959 34.615 0.00 0.00 43.68 2.83
255 256 5.535783 ACATGACCAATTCATCAGAACAACA 59.464 36.000 0.00 0.00 43.68 3.33
256 257 5.860182 CACATGACCAATTCATCAGAACAAC 59.140 40.000 0.00 0.00 43.68 3.32
257 258 5.047872 CCACATGACCAATTCATCAGAACAA 60.048 40.000 0.00 0.00 43.68 2.83
258 259 4.460034 CCACATGACCAATTCATCAGAACA 59.540 41.667 0.00 0.00 43.68 3.18
259 260 4.142315 CCCACATGACCAATTCATCAGAAC 60.142 45.833 0.00 0.00 43.68 3.01
260 261 4.018490 CCCACATGACCAATTCATCAGAA 58.982 43.478 0.00 0.00 43.68 3.02
261 262 3.623703 CCCACATGACCAATTCATCAGA 58.376 45.455 0.00 0.00 43.68 3.27
262 263 2.691526 CCCCACATGACCAATTCATCAG 59.308 50.000 0.00 0.00 43.68 2.90
263 264 2.737544 CCCCACATGACCAATTCATCA 58.262 47.619 0.00 0.00 43.68 3.07
264 265 1.410153 GCCCCACATGACCAATTCATC 59.590 52.381 0.00 0.00 43.68 2.92
265 266 1.488390 GCCCCACATGACCAATTCAT 58.512 50.000 0.00 0.00 46.75 2.57
266 267 0.614415 GGCCCCACATGACCAATTCA 60.614 55.000 0.00 0.00 39.11 2.57
267 268 0.324645 AGGCCCCACATGACCAATTC 60.325 55.000 0.00 0.00 0.00 2.17
268 269 0.324645 GAGGCCCCACATGACCAATT 60.325 55.000 0.00 0.00 0.00 2.32
269 270 1.307647 GAGGCCCCACATGACCAAT 59.692 57.895 0.00 0.00 0.00 3.16
270 271 1.724148 TTGAGGCCCCACATGACCAA 61.724 55.000 0.00 0.00 0.00 3.67
271 272 2.159490 TTGAGGCCCCACATGACCA 61.159 57.895 0.00 0.00 0.00 4.02
272 273 1.678970 GTTGAGGCCCCACATGACC 60.679 63.158 0.00 0.00 0.00 4.02
273 274 0.678048 GAGTTGAGGCCCCACATGAC 60.678 60.000 0.00 0.00 0.00 3.06
274 275 1.685224 GAGTTGAGGCCCCACATGA 59.315 57.895 0.00 0.00 0.00 3.07
275 276 1.746615 CGAGTTGAGGCCCCACATG 60.747 63.158 0.00 0.00 0.00 3.21
276 277 1.918293 TCGAGTTGAGGCCCCACAT 60.918 57.895 0.00 0.00 0.00 3.21
277 278 2.525629 TCGAGTTGAGGCCCCACA 60.526 61.111 0.00 0.00 0.00 4.17
278 279 2.047179 GTCGAGTTGAGGCCCCAC 60.047 66.667 0.00 0.00 0.00 4.61
279 280 3.691342 CGTCGAGTTGAGGCCCCA 61.691 66.667 0.00 0.00 0.00 4.96
280 281 3.358076 CTCGTCGAGTTGAGGCCCC 62.358 68.421 14.27 0.00 32.48 5.80
281 282 2.182030 CTCGTCGAGTTGAGGCCC 59.818 66.667 14.27 0.00 32.48 5.80
282 283 2.963371 ACTCGTCGAGTTGAGGCC 59.037 61.111 22.05 0.00 40.28 5.19
289 290 0.875728 CAGTCAGGAACTCGTCGAGT 59.124 55.000 22.05 22.05 45.64 4.18
290 291 1.135916 GTCAGTCAGGAACTCGTCGAG 60.136 57.143 20.57 20.57 34.60 4.04
291 292 0.873054 GTCAGTCAGGAACTCGTCGA 59.127 55.000 0.00 0.00 34.60 4.20
292 293 0.875728 AGTCAGTCAGGAACTCGTCG 59.124 55.000 0.00 0.00 34.60 5.12
293 294 3.075884 AGTAGTCAGTCAGGAACTCGTC 58.924 50.000 0.00 0.00 34.60 4.20
294 295 3.143211 AGTAGTCAGTCAGGAACTCGT 57.857 47.619 0.00 0.00 34.60 4.18
295 296 4.001652 TGTAGTAGTCAGTCAGGAACTCG 58.998 47.826 0.00 0.00 34.60 4.18
296 297 5.241064 TGTTGTAGTAGTCAGTCAGGAACTC 59.759 44.000 0.00 0.00 34.60 3.01
297 298 5.138276 TGTTGTAGTAGTCAGTCAGGAACT 58.862 41.667 0.00 0.00 43.88 3.01
298 299 5.449107 TGTTGTAGTAGTCAGTCAGGAAC 57.551 43.478 0.00 0.00 0.00 3.62
299 300 6.474140 TTTGTTGTAGTAGTCAGTCAGGAA 57.526 37.500 0.00 0.00 0.00 3.36
300 301 6.665992 ATTTGTTGTAGTAGTCAGTCAGGA 57.334 37.500 0.00 0.00 0.00 3.86
301 302 7.730364 AAATTTGTTGTAGTAGTCAGTCAGG 57.270 36.000 0.00 0.00 0.00 3.86
303 304 9.048446 GGTTAAATTTGTTGTAGTAGTCAGTCA 57.952 33.333 0.00 0.00 0.00 3.41
304 305 9.269453 AGGTTAAATTTGTTGTAGTAGTCAGTC 57.731 33.333 0.00 0.00 0.00 3.51
305 306 9.052759 CAGGTTAAATTTGTTGTAGTAGTCAGT 57.947 33.333 0.00 0.00 0.00 3.41
306 307 9.268268 TCAGGTTAAATTTGTTGTAGTAGTCAG 57.732 33.333 0.00 0.00 0.00 3.51
307 308 9.616156 TTCAGGTTAAATTTGTTGTAGTAGTCA 57.384 29.630 0.00 0.00 0.00 3.41
308 309 9.874215 GTTCAGGTTAAATTTGTTGTAGTAGTC 57.126 33.333 0.00 0.00 0.00 2.59
309 310 8.843262 GGTTCAGGTTAAATTTGTTGTAGTAGT 58.157 33.333 0.00 0.00 0.00 2.73
310 311 9.063615 AGGTTCAGGTTAAATTTGTTGTAGTAG 57.936 33.333 0.00 0.00 0.00 2.57
311 312 8.842280 CAGGTTCAGGTTAAATTTGTTGTAGTA 58.158 33.333 0.00 0.00 0.00 1.82
312 313 7.201875 CCAGGTTCAGGTTAAATTTGTTGTAGT 60.202 37.037 0.00 0.00 0.00 2.73
313 314 7.145323 CCAGGTTCAGGTTAAATTTGTTGTAG 58.855 38.462 0.00 0.00 0.00 2.74
314 315 6.608002 ACCAGGTTCAGGTTAAATTTGTTGTA 59.392 34.615 0.00 0.00 35.33 2.41
315 316 5.423931 ACCAGGTTCAGGTTAAATTTGTTGT 59.576 36.000 0.00 0.00 35.33 3.32
316 317 5.752955 CACCAGGTTCAGGTTAAATTTGTTG 59.247 40.000 0.00 0.00 37.23 3.33
317 318 5.659079 TCACCAGGTTCAGGTTAAATTTGTT 59.341 36.000 0.00 0.00 37.23 2.83
318 319 5.205056 TCACCAGGTTCAGGTTAAATTTGT 58.795 37.500 0.00 0.00 37.23 2.83
319 320 5.534654 TCTCACCAGGTTCAGGTTAAATTTG 59.465 40.000 0.00 0.00 37.23 2.32
320 321 5.701224 TCTCACCAGGTTCAGGTTAAATTT 58.299 37.500 0.00 0.00 37.23 1.82
321 322 5.073144 TCTCTCACCAGGTTCAGGTTAAATT 59.927 40.000 0.00 0.00 37.23 1.82
322 323 4.597507 TCTCTCACCAGGTTCAGGTTAAAT 59.402 41.667 0.00 0.00 37.23 1.40
323 324 3.971305 TCTCTCACCAGGTTCAGGTTAAA 59.029 43.478 0.00 0.00 37.23 1.52
324 325 3.578716 CTCTCTCACCAGGTTCAGGTTAA 59.421 47.826 0.00 0.00 37.23 2.01
325 326 3.165875 CTCTCTCACCAGGTTCAGGTTA 58.834 50.000 0.00 0.00 37.23 2.85
326 327 1.974236 CTCTCTCACCAGGTTCAGGTT 59.026 52.381 0.00 0.00 37.23 3.50
327 328 1.638529 CTCTCTCACCAGGTTCAGGT 58.361 55.000 0.00 0.00 40.85 4.00
328 329 0.901124 CCTCTCTCACCAGGTTCAGG 59.099 60.000 0.00 0.00 0.00 3.86
329 330 1.930251 TCCTCTCTCACCAGGTTCAG 58.070 55.000 0.00 0.00 0.00 3.02
330 331 2.461695 GATCCTCTCTCACCAGGTTCA 58.538 52.381 0.00 0.00 31.25 3.18
331 332 1.407258 CGATCCTCTCTCACCAGGTTC 59.593 57.143 0.00 0.00 0.00 3.62
332 333 1.006043 TCGATCCTCTCTCACCAGGTT 59.994 52.381 0.00 0.00 0.00 3.50
333 334 0.626382 TCGATCCTCTCTCACCAGGT 59.374 55.000 0.00 0.00 0.00 4.00
334 335 1.612950 CATCGATCCTCTCTCACCAGG 59.387 57.143 0.00 0.00 0.00 4.45
335 336 2.553602 CTCATCGATCCTCTCTCACCAG 59.446 54.545 0.00 0.00 0.00 4.00
336 337 2.580962 CTCATCGATCCTCTCTCACCA 58.419 52.381 0.00 0.00 0.00 4.17
337 338 1.885887 CCTCATCGATCCTCTCTCACC 59.114 57.143 0.00 0.00 0.00 4.02
338 339 1.885887 CCCTCATCGATCCTCTCTCAC 59.114 57.143 0.00 0.00 0.00 3.51
339 340 1.821272 GCCCTCATCGATCCTCTCTCA 60.821 57.143 0.00 0.00 0.00 3.27
340 341 0.887933 GCCCTCATCGATCCTCTCTC 59.112 60.000 0.00 0.00 0.00 3.20
341 342 0.893270 CGCCCTCATCGATCCTCTCT 60.893 60.000 0.00 0.00 0.00 3.10
342 343 1.583986 CGCCCTCATCGATCCTCTC 59.416 63.158 0.00 0.00 0.00 3.20
343 344 1.905843 CCGCCCTCATCGATCCTCT 60.906 63.158 0.00 0.00 0.00 3.69
344 345 2.653702 CCGCCCTCATCGATCCTC 59.346 66.667 0.00 0.00 0.00 3.71
345 346 3.620785 GCCGCCCTCATCGATCCT 61.621 66.667 0.00 0.00 0.00 3.24
364 365 1.278238 AGATTAGCGAACCGAAAGCG 58.722 50.000 0.00 0.00 35.78 4.68
365 366 3.445857 ACTAGATTAGCGAACCGAAAGC 58.554 45.455 0.00 0.00 0.00 3.51
366 367 4.863131 ACAACTAGATTAGCGAACCGAAAG 59.137 41.667 0.00 0.00 0.00 2.62
367 368 4.813027 ACAACTAGATTAGCGAACCGAAA 58.187 39.130 0.00 0.00 0.00 3.46
368 369 4.445452 ACAACTAGATTAGCGAACCGAA 57.555 40.909 0.00 0.00 0.00 4.30
369 370 4.637534 AGTACAACTAGATTAGCGAACCGA 59.362 41.667 0.00 0.00 0.00 4.69
370 371 4.918037 AGTACAACTAGATTAGCGAACCG 58.082 43.478 0.00 0.00 0.00 4.44
371 372 6.034683 CACAAGTACAACTAGATTAGCGAACC 59.965 42.308 0.00 0.00 0.00 3.62
372 373 6.585322 ACACAAGTACAACTAGATTAGCGAAC 59.415 38.462 0.00 0.00 0.00 3.95
373 374 6.684686 ACACAAGTACAACTAGATTAGCGAA 58.315 36.000 0.00 0.00 0.00 4.70
374 375 6.263516 ACACAAGTACAACTAGATTAGCGA 57.736 37.500 0.00 0.00 0.00 4.93
375 376 6.807230 AGAACACAAGTACAACTAGATTAGCG 59.193 38.462 0.00 0.00 0.00 4.26
376 377 8.535690 AAGAACACAAGTACAACTAGATTAGC 57.464 34.615 0.00 0.00 0.00 3.09
378 379 9.826574 ACAAAGAACACAAGTACAACTAGATTA 57.173 29.630 0.00 0.00 0.00 1.75
379 380 8.732746 ACAAAGAACACAAGTACAACTAGATT 57.267 30.769 0.00 0.00 0.00 2.40
380 381 9.257651 GTACAAAGAACACAAGTACAACTAGAT 57.742 33.333 0.00 0.00 36.11 1.98
381 382 8.472413 AGTACAAAGAACACAAGTACAACTAGA 58.528 33.333 0.00 0.00 37.96 2.43
382 383 8.540492 CAGTACAAAGAACACAAGTACAACTAG 58.460 37.037 0.00 0.00 37.96 2.57
383 384 7.010738 GCAGTACAAAGAACACAAGTACAACTA 59.989 37.037 0.00 0.00 37.96 2.24
384 385 6.183360 GCAGTACAAAGAACACAAGTACAACT 60.183 38.462 0.00 0.00 37.96 3.16
385 386 5.963586 GCAGTACAAAGAACACAAGTACAAC 59.036 40.000 0.00 0.00 37.96 3.32
386 387 5.644206 TGCAGTACAAAGAACACAAGTACAA 59.356 36.000 0.00 0.00 37.96 2.41
387 388 5.179533 TGCAGTACAAAGAACACAAGTACA 58.820 37.500 0.00 0.00 37.96 2.90
388 389 5.728351 TGCAGTACAAAGAACACAAGTAC 57.272 39.130 0.00 0.00 36.26 2.73
389 390 6.202762 CAGATGCAGTACAAAGAACACAAGTA 59.797 38.462 0.00 0.00 0.00 2.24
390 391 5.008019 CAGATGCAGTACAAAGAACACAAGT 59.992 40.000 0.00 0.00 0.00 3.16
391 392 5.237127 TCAGATGCAGTACAAAGAACACAAG 59.763 40.000 0.00 0.00 0.00 3.16
392 393 5.122519 TCAGATGCAGTACAAAGAACACAA 58.877 37.500 0.00 0.00 0.00 3.33
393 394 4.702831 TCAGATGCAGTACAAAGAACACA 58.297 39.130 0.00 0.00 0.00 3.72
394 395 5.869753 ATCAGATGCAGTACAAAGAACAC 57.130 39.130 0.00 0.00 0.00 3.32
395 396 6.882610 AAATCAGATGCAGTACAAAGAACA 57.117 33.333 0.00 0.00 0.00 3.18
417 418 8.488651 TGTTTAAATAAGTTTTGCGGGAAAAA 57.511 26.923 9.04 0.00 35.27 1.94
418 419 8.488651 TTGTTTAAATAAGTTTTGCGGGAAAA 57.511 26.923 3.11 3.11 0.00 2.29
419 420 8.488651 TTTGTTTAAATAAGTTTTGCGGGAAA 57.511 26.923 0.00 0.00 0.00 3.13
420 421 8.664211 ATTTGTTTAAATAAGTTTTGCGGGAA 57.336 26.923 0.00 0.00 34.81 3.97
421 422 8.552034 CAATTTGTTTAAATAAGTTTTGCGGGA 58.448 29.630 3.23 0.00 35.50 5.14
422 423 8.338986 ACAATTTGTTTAAATAAGTTTTGCGGG 58.661 29.630 3.23 0.00 35.50 6.13
423 424 9.709600 AACAATTTGTTTAAATAAGTTTTGCGG 57.290 25.926 8.97 0.00 37.26 5.69
441 442 6.966066 CAGGCCAAAAACTAAACAACAATTTG 59.034 34.615 5.01 0.00 38.83 2.32
442 443 6.657117 ACAGGCCAAAAACTAAACAACAATTT 59.343 30.769 5.01 0.00 0.00 1.82
443 444 6.176896 ACAGGCCAAAAACTAAACAACAATT 58.823 32.000 5.01 0.00 0.00 2.32
444 445 5.739959 ACAGGCCAAAAACTAAACAACAAT 58.260 33.333 5.01 0.00 0.00 2.71
445 446 5.153950 ACAGGCCAAAAACTAAACAACAA 57.846 34.783 5.01 0.00 0.00 2.83
446 447 4.810191 ACAGGCCAAAAACTAAACAACA 57.190 36.364 5.01 0.00 0.00 3.33
447 448 4.266739 CGAACAGGCCAAAAACTAAACAAC 59.733 41.667 5.01 0.00 0.00 3.32
448 449 4.158025 TCGAACAGGCCAAAAACTAAACAA 59.842 37.500 5.01 0.00 0.00 2.83
449 450 3.695060 TCGAACAGGCCAAAAACTAAACA 59.305 39.130 5.01 0.00 0.00 2.83
450 451 4.295857 TCGAACAGGCCAAAAACTAAAC 57.704 40.909 5.01 0.00 0.00 2.01
451 452 4.339814 ACATCGAACAGGCCAAAAACTAAA 59.660 37.500 5.01 0.00 0.00 1.85
452 453 3.886505 ACATCGAACAGGCCAAAAACTAA 59.113 39.130 5.01 0.00 0.00 2.24
453 454 3.482436 ACATCGAACAGGCCAAAAACTA 58.518 40.909 5.01 0.00 0.00 2.24
454 455 2.306847 ACATCGAACAGGCCAAAAACT 58.693 42.857 5.01 0.00 0.00 2.66
455 456 2.793278 ACATCGAACAGGCCAAAAAC 57.207 45.000 5.01 0.00 0.00 2.43
456 457 2.224549 CGTACATCGAACAGGCCAAAAA 59.775 45.455 5.01 0.00 42.86 1.94
457 458 1.801771 CGTACATCGAACAGGCCAAAA 59.198 47.619 5.01 0.00 42.86 2.44
458 459 1.001068 TCGTACATCGAACAGGCCAAA 59.999 47.619 5.01 0.00 45.98 3.28
459 460 0.604073 TCGTACATCGAACAGGCCAA 59.396 50.000 5.01 0.00 45.98 4.52
460 461 2.268999 TCGTACATCGAACAGGCCA 58.731 52.632 5.01 0.00 45.98 5.36
469 470 5.800438 TCTCTTTTTCTGTCATCGTACATCG 59.200 40.000 0.00 0.00 41.41 3.84
470 471 7.582435 TTCTCTTTTTCTGTCATCGTACATC 57.418 36.000 0.00 0.00 0.00 3.06
471 472 7.657761 AGTTTCTCTTTTTCTGTCATCGTACAT 59.342 33.333 0.00 0.00 0.00 2.29
472 473 6.984474 AGTTTCTCTTTTTCTGTCATCGTACA 59.016 34.615 0.00 0.00 0.00 2.90
473 474 7.042658 ACAGTTTCTCTTTTTCTGTCATCGTAC 60.043 37.037 0.00 0.00 34.87 3.67
474 475 6.984474 ACAGTTTCTCTTTTTCTGTCATCGTA 59.016 34.615 0.00 0.00 34.87 3.43
475 476 5.817816 ACAGTTTCTCTTTTTCTGTCATCGT 59.182 36.000 0.00 0.00 34.87 3.73
476 477 6.132056 CACAGTTTCTCTTTTTCTGTCATCG 58.868 40.000 0.00 0.00 37.27 3.84
477 478 5.911838 GCACAGTTTCTCTTTTTCTGTCATC 59.088 40.000 0.00 0.00 37.27 2.92
478 479 5.357878 TGCACAGTTTCTCTTTTTCTGTCAT 59.642 36.000 0.00 0.00 37.27 3.06
479 480 4.699735 TGCACAGTTTCTCTTTTTCTGTCA 59.300 37.500 0.00 0.00 37.27 3.58
480 481 5.235305 TGCACAGTTTCTCTTTTTCTGTC 57.765 39.130 0.00 0.00 37.27 3.51
481 482 5.841957 ATGCACAGTTTCTCTTTTTCTGT 57.158 34.783 0.00 0.00 39.48 3.41
482 483 8.807667 ATAAATGCACAGTTTCTCTTTTTCTG 57.192 30.769 0.00 0.00 0.00 3.02
483 484 9.899226 GTATAAATGCACAGTTTCTCTTTTTCT 57.101 29.630 0.00 0.00 0.00 2.52
484 485 9.677567 TGTATAAATGCACAGTTTCTCTTTTTC 57.322 29.630 0.00 0.00 0.00 2.29
485 486 9.463443 GTGTATAAATGCACAGTTTCTCTTTTT 57.537 29.630 6.34 0.00 42.04 1.94
486 487 7.803189 CGTGTATAAATGCACAGTTTCTCTTTT 59.197 33.333 11.02 0.00 42.49 2.27
487 488 7.041372 ACGTGTATAAATGCACAGTTTCTCTTT 60.041 33.333 11.02 0.00 42.49 2.52
488 489 6.426937 ACGTGTATAAATGCACAGTTTCTCTT 59.573 34.615 11.02 0.00 42.49 2.85
489 490 5.932303 ACGTGTATAAATGCACAGTTTCTCT 59.068 36.000 11.02 0.00 42.49 3.10
490 491 6.015504 CACGTGTATAAATGCACAGTTTCTC 58.984 40.000 7.58 0.00 42.49 2.87
491 492 5.106712 CCACGTGTATAAATGCACAGTTTCT 60.107 40.000 15.65 0.00 42.49 2.52
492 493 5.086058 CCACGTGTATAAATGCACAGTTTC 58.914 41.667 15.65 0.00 42.49 2.78
493 494 4.757657 TCCACGTGTATAAATGCACAGTTT 59.242 37.500 15.65 0.00 42.49 2.66
494 495 4.320023 TCCACGTGTATAAATGCACAGTT 58.680 39.130 15.65 0.00 42.49 3.16
495 496 3.932710 CTCCACGTGTATAAATGCACAGT 59.067 43.478 15.65 7.21 42.49 3.55
496 497 3.932710 ACTCCACGTGTATAAATGCACAG 59.067 43.478 15.65 6.70 42.49 3.66
497 498 3.932822 ACTCCACGTGTATAAATGCACA 58.067 40.909 15.65 0.00 42.49 4.57
498 499 6.256975 TCATTACTCCACGTGTATAAATGCAC 59.743 38.462 15.65 1.52 39.57 4.57
499 500 6.342111 TCATTACTCCACGTGTATAAATGCA 58.658 36.000 15.65 0.00 0.00 3.96
500 501 6.479001 ACTCATTACTCCACGTGTATAAATGC 59.521 38.462 15.65 0.00 0.00 3.56
501 502 9.524106 TTACTCATTACTCCACGTGTATAAATG 57.476 33.333 15.65 17.02 0.00 2.32
503 504 9.926158 TTTTACTCATTACTCCACGTGTATAAA 57.074 29.630 15.65 4.02 0.00 1.40
505 506 9.524106 CATTTTACTCATTACTCCACGTGTATA 57.476 33.333 15.65 0.51 0.00 1.47
506 507 8.038944 ACATTTTACTCATTACTCCACGTGTAT 58.961 33.333 15.65 1.56 0.00 2.29
507 508 7.329962 CACATTTTACTCATTACTCCACGTGTA 59.670 37.037 15.65 0.00 0.00 2.90
508 509 6.147164 CACATTTTACTCATTACTCCACGTGT 59.853 38.462 15.65 0.00 0.00 4.49
509 510 6.147164 ACACATTTTACTCATTACTCCACGTG 59.853 38.462 9.08 9.08 0.00 4.49
510 511 6.228258 ACACATTTTACTCATTACTCCACGT 58.772 36.000 0.00 0.00 0.00 4.49
607 608 1.959226 CTCGACCACCCCGTTGTTG 60.959 63.158 0.00 0.00 0.00 3.33
623 624 3.949842 AAAGGAAGCTCAAATTGGCTC 57.050 42.857 8.88 4.37 37.87 4.70
639 641 1.241315 ATCCCGACGTTGCCAAAAGG 61.241 55.000 0.00 0.00 0.00 3.11
665 667 0.179094 TTTATGACGCTACCGCTGGG 60.179 55.000 0.00 0.00 38.22 4.45
671 673 3.181458 TGGAGGGAATTTATGACGCTACC 60.181 47.826 0.00 0.00 0.00 3.18
688 690 1.831106 GGTTGCCCCTAATTTTGGAGG 59.169 52.381 0.00 0.20 0.00 4.30
775 790 1.527370 GCCCTGGGATGTCAGTACC 59.473 63.158 19.27 0.00 33.14 3.34
950 974 2.723530 AGGAGTGGGGAAGAAGAAGA 57.276 50.000 0.00 0.00 0.00 2.87
951 975 2.026729 GGAAGGAGTGGGGAAGAAGAAG 60.027 54.545 0.00 0.00 0.00 2.85
952 976 1.985895 GGAAGGAGTGGGGAAGAAGAA 59.014 52.381 0.00 0.00 0.00 2.52
985 1009 1.313091 GCCATGGTCGGGGTTCTTTC 61.313 60.000 14.67 0.00 0.00 2.62
1029 1053 4.008933 GTGGAGCTGTCGGTGGCT 62.009 66.667 0.00 0.00 41.88 4.75
1033 1057 3.626924 GGGTGTGGAGCTGTCGGT 61.627 66.667 0.00 0.00 0.00 4.69
1287 1311 3.123620 CTGCTGCCGCTGGAACTC 61.124 66.667 0.70 0.00 36.97 3.01
1713 1737 3.742983 GAGTCCGCTTTTCCTCGAT 57.257 52.632 0.00 0.00 0.00 3.59
1740 1764 2.095252 GCGGCCTCTCTTGACGTTC 61.095 63.158 0.00 0.00 0.00 3.95
1817 1841 7.674240 GCACGATCTTTACACAAGATTACTTCC 60.674 40.741 0.00 0.00 37.14 3.46
1919 1944 5.660629 TTTGTTTCGAATTAAGCGTCTCA 57.339 34.783 0.00 0.00 0.00 3.27
1947 1972 3.692101 ACTCCTTGAGATCTGTACAGACG 59.308 47.826 27.41 11.35 35.16 4.18
1950 1975 4.019858 TGGACTCCTTGAGATCTGTACAG 58.980 47.826 17.17 17.17 33.32 2.74
1969 1994 6.213397 TCTTCAAGATAGAAAGTCATGGTGGA 59.787 38.462 0.00 0.00 0.00 4.02
2075 2127 9.499585 GAGAAGCTGCGTAACGATATAATAATA 57.500 33.333 0.00 0.00 0.00 0.98
2076 2128 7.488471 GGAGAAGCTGCGTAACGATATAATAAT 59.512 37.037 0.00 0.00 0.00 1.28
2077 2129 6.805271 GGAGAAGCTGCGTAACGATATAATAA 59.195 38.462 0.00 0.00 0.00 1.40
2126 2178 2.496899 TTCTCTGGTGGCAAGATTCC 57.503 50.000 0.00 0.00 0.00 3.01
2132 2184 4.151121 TGAATGAATTTCTCTGGTGGCAA 58.849 39.130 0.00 0.00 35.23 4.52
2161 2213 7.042321 AGTCGAGAATTCAGACGAGTATTCTAG 60.042 40.741 20.79 0.00 36.26 2.43
2162 2214 6.762187 AGTCGAGAATTCAGACGAGTATTCTA 59.238 38.462 20.79 1.16 36.26 2.10
2164 2216 5.679355 CAGTCGAGAATTCAGACGAGTATTC 59.321 44.000 20.79 11.18 39.65 1.75
2165 2217 5.354513 TCAGTCGAGAATTCAGACGAGTATT 59.645 40.000 20.79 6.84 39.65 1.89
2166 2218 4.876679 TCAGTCGAGAATTCAGACGAGTAT 59.123 41.667 20.79 10.23 39.65 2.12
2167 2219 4.093115 GTCAGTCGAGAATTCAGACGAGTA 59.907 45.833 20.79 11.81 39.65 2.59
2286 2338 7.406031 AATGAATTCAGCATGGATGGATATC 57.594 36.000 14.54 0.00 31.86 1.63
2389 2452 2.285180 CAGGAGAGGGAGAGGGGG 59.715 72.222 0.00 0.00 0.00 5.40
2492 2555 3.667429 GAAACGTCTGCATGCGGGC 62.667 63.158 25.97 23.79 0.00 6.13
2493 2556 1.970917 GAGAAACGTCTGCATGCGGG 61.971 60.000 25.97 14.83 32.80 6.13
2494 2557 1.421485 GAGAAACGTCTGCATGCGG 59.579 57.895 21.02 21.02 32.80 5.69
2530 2593 2.026522 CCCGCCTAGAAGAGACGAG 58.973 63.158 0.00 0.00 0.00 4.18
2567 2630 4.357947 GCCGACACGACTGGAGCA 62.358 66.667 0.00 0.00 0.00 4.26
2597 2660 4.054455 CACGGCGTCGGTTGTTCG 62.054 66.667 16.39 0.00 41.39 3.95
2598 2661 3.708734 CCACGGCGTCGGTTGTTC 61.709 66.667 16.39 0.00 41.39 3.18
2727 2796 1.627550 GAGAGGACGAAAAGTGCGCC 61.628 60.000 4.18 0.00 46.56 6.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.