Multiple sequence alignment - TraesCS2B01G211300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G211300 chr2B 100.000 2953 0 0 1 2953 194997083 194994131 0.000000e+00 5454.0
1 TraesCS2B01G211300 chr2B 95.680 625 27 0 2329 2953 150533122 150532498 0.000000e+00 1005.0
2 TraesCS2B01G211300 chr2B 83.353 847 89 28 1207 2021 195456090 195456916 0.000000e+00 736.0
3 TraesCS2B01G211300 chr2B 79.322 856 102 33 1207 2021 195005837 195005016 5.600000e-147 531.0
4 TraesCS2B01G211300 chr2B 83.951 162 16 8 744 897 194953225 194953066 2.370000e-31 147.0
5 TraesCS2B01G211300 chr2B 84.962 133 8 6 1 133 195059175 195059055 1.110000e-24 124.0
6 TraesCS2B01G211300 chr2B 75.779 289 44 18 1 279 194953974 194953702 4.000000e-24 122.0
7 TraesCS2B01G211300 chr2B 84.810 79 7 3 1 74 195169422 195169344 1.140000e-09 75.0
8 TraesCS2B01G211300 chr2A 92.150 1414 80 12 619 2021 165008610 165010003 0.000000e+00 1967.0
9 TraesCS2B01G211300 chr2A 84.863 839 92 17 1207 2021 164768182 164767355 0.000000e+00 813.0
10 TraesCS2B01G211300 chr2A 81.098 492 57 22 1496 1961 165004107 165004588 7.780000e-96 361.0
11 TraesCS2B01G211300 chr2A 86.452 310 20 5 2022 2329 165010039 165010328 1.320000e-83 320.0
12 TraesCS2B01G211300 chr2A 90.511 137 10 3 271 406 165105700 165105834 8.410000e-41 178.0
13 TraesCS2B01G211300 chr2A 85.185 162 11 8 463 616 165008302 165008458 1.420000e-33 154.0
14 TraesCS2B01G211300 chr2A 84.277 159 18 6 744 897 165106101 165106257 6.590000e-32 148.0
15 TraesCS2B01G211300 chr2A 89.744 78 4 3 1 74 164876480 164876557 2.420000e-16 97.1
16 TraesCS2B01G211300 chr4B 96.640 625 21 0 2329 2953 543361017 543360393 0.000000e+00 1038.0
17 TraesCS2B01G211300 chr3A 96.320 625 23 0 2329 2953 125493231 125493855 0.000000e+00 1027.0
18 TraesCS2B01G211300 chr6B 96.160 625 24 0 2329 2953 64731875 64731251 0.000000e+00 1022.0
19 TraesCS2B01G211300 chr3B 96.160 625 24 0 2329 2953 583990774 583991398 0.000000e+00 1022.0
20 TraesCS2B01G211300 chr5B 96.000 625 25 0 2329 2953 372566300 372565676 0.000000e+00 1016.0
21 TraesCS2B01G211300 chr5B 95.840 625 26 0 2329 2953 606031677 606031053 0.000000e+00 1011.0
22 TraesCS2B01G211300 chr4A 95.680 625 27 0 2329 2953 215028659 215029283 0.000000e+00 1005.0
23 TraesCS2B01G211300 chr4D 94.400 625 35 0 2329 2953 30161881 30161257 0.000000e+00 961.0
24 TraesCS2B01G211300 chr2D 82.553 940 93 37 1127 2021 136754430 136755343 0.000000e+00 761.0
25 TraesCS2B01G211300 chr2D 87.633 469 37 14 466 931 136516309 136515859 2.610000e-145 525.0
26 TraesCS2B01G211300 chr2D 78.802 835 99 38 1207 1991 136521178 136520372 9.510000e-135 490.0
27 TraesCS2B01G211300 chr2D 80.201 298 39 10 1 279 136514628 136514332 3.860000e-49 206.0
28 TraesCS2B01G211300 chr2D 89.510 143 10 4 1 138 136611924 136611782 3.020000e-40 176.0
29 TraesCS2B01G211300 chr2D 90.769 130 7 2 298 427 136611605 136611481 5.060000e-38 169.0
30 TraesCS2B01G211300 chr2D 94.286 70 4 0 358 427 136607129 136607060 1.120000e-19 108.0
31 TraesCS2B01G211300 chr7D 85.446 213 14 7 2020 2215 216469243 216469455 3.860000e-49 206.0
32 TraesCS2B01G211300 chr1B 91.241 137 9 3 271 406 512053038 512053172 1.810000e-42 183.0
33 TraesCS2B01G211300 chr1B 84.906 159 17 6 744 897 512053439 512053595 1.420000e-33 154.0
34 TraesCS2B01G211300 chr7A 92.063 126 10 0 1633 1758 652985761 652985636 8.410000e-41 178.0
35 TraesCS2B01G211300 chrUn 91.566 83 3 4 744 823 477030847 477030766 8.650000e-21 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G211300 chr2B 194994131 194997083 2952 True 5454.0 5454 100.00000 1 2953 1 chr2B.!!$R2 2952
1 TraesCS2B01G211300 chr2B 150532498 150533122 624 True 1005.0 1005 95.68000 2329 2953 1 chr2B.!!$R1 624
2 TraesCS2B01G211300 chr2B 195456090 195456916 826 False 736.0 736 83.35300 1207 2021 1 chr2B.!!$F1 814
3 TraesCS2B01G211300 chr2B 195005016 195005837 821 True 531.0 531 79.32200 1207 2021 1 chr2B.!!$R3 814
4 TraesCS2B01G211300 chr2A 164767355 164768182 827 True 813.0 813 84.86300 1207 2021 1 chr2A.!!$R1 814
5 TraesCS2B01G211300 chr2A 165004107 165010328 6221 False 700.5 1967 86.22125 463 2329 4 chr2A.!!$F2 1866
6 TraesCS2B01G211300 chr4B 543360393 543361017 624 True 1038.0 1038 96.64000 2329 2953 1 chr4B.!!$R1 624
7 TraesCS2B01G211300 chr3A 125493231 125493855 624 False 1027.0 1027 96.32000 2329 2953 1 chr3A.!!$F1 624
8 TraesCS2B01G211300 chr6B 64731251 64731875 624 True 1022.0 1022 96.16000 2329 2953 1 chr6B.!!$R1 624
9 TraesCS2B01G211300 chr3B 583990774 583991398 624 False 1022.0 1022 96.16000 2329 2953 1 chr3B.!!$F1 624
10 TraesCS2B01G211300 chr5B 372565676 372566300 624 True 1016.0 1016 96.00000 2329 2953 1 chr5B.!!$R1 624
11 TraesCS2B01G211300 chr5B 606031053 606031677 624 True 1011.0 1011 95.84000 2329 2953 1 chr5B.!!$R2 624
12 TraesCS2B01G211300 chr4A 215028659 215029283 624 False 1005.0 1005 95.68000 2329 2953 1 chr4A.!!$F1 624
13 TraesCS2B01G211300 chr4D 30161257 30161881 624 True 961.0 961 94.40000 2329 2953 1 chr4D.!!$R1 624
14 TraesCS2B01G211300 chr2D 136754430 136755343 913 False 761.0 761 82.55300 1127 2021 1 chr2D.!!$F1 894
15 TraesCS2B01G211300 chr2D 136520372 136521178 806 True 490.0 490 78.80200 1207 1991 1 chr2D.!!$R1 784
16 TraesCS2B01G211300 chr2D 136514332 136516309 1977 True 365.5 525 83.91700 1 931 2 chr2D.!!$R3 930

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
583 4319 0.036164 TGCACGTAGGCAATCAACCT 59.964 50.0 0.0 0.0 41.65 3.5 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2203 6995 1.033574 TGTAACCCCAAAACGCAAGG 58.966 50.0 0.0 0.0 46.39 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.648454 TCGCGCTCAAGCTGTACA 59.352 55.556 5.56 0.00 39.32 2.90
18 19 1.215382 TCGCGCTCAAGCTGTACAT 59.785 52.632 5.56 0.00 39.32 2.29
19 20 1.078201 TCGCGCTCAAGCTGTACATG 61.078 55.000 5.56 0.00 39.32 3.21
20 21 1.078201 CGCGCTCAAGCTGTACATGA 61.078 55.000 5.56 0.00 39.32 3.07
23 24 1.863454 CGCTCAAGCTGTACATGATCC 59.137 52.381 0.00 0.00 39.32 3.36
24 25 2.482664 CGCTCAAGCTGTACATGATCCT 60.483 50.000 0.00 0.00 39.32 3.24
25 26 2.871022 GCTCAAGCTGTACATGATCCTG 59.129 50.000 0.00 0.00 38.21 3.86
27 28 2.840038 TCAAGCTGTACATGATCCTGGT 59.160 45.455 0.00 0.00 0.00 4.00
28 29 2.941064 CAAGCTGTACATGATCCTGGTG 59.059 50.000 0.00 0.00 0.00 4.17
30 31 1.134280 GCTGTACATGATCCTGGTGCT 60.134 52.381 0.00 0.00 0.00 4.40
31 32 2.558378 CTGTACATGATCCTGGTGCTG 58.442 52.381 0.00 0.00 0.00 4.41
35 36 0.253894 CATGATCCTGGTGCTGGTCA 59.746 55.000 0.00 0.00 0.00 4.02
36 37 0.545171 ATGATCCTGGTGCTGGTCAG 59.455 55.000 0.00 0.00 0.00 3.51
37 38 0.837691 TGATCCTGGTGCTGGTCAGT 60.838 55.000 0.00 0.00 0.00 3.41
38 39 0.107945 GATCCTGGTGCTGGTCAGTC 60.108 60.000 0.00 0.00 0.00 3.51
39 40 0.546267 ATCCTGGTGCTGGTCAGTCT 60.546 55.000 0.00 0.00 0.00 3.24
40 41 0.764369 TCCTGGTGCTGGTCAGTCTT 60.764 55.000 0.00 0.00 0.00 3.01
41 42 0.109342 CCTGGTGCTGGTCAGTCTTT 59.891 55.000 0.00 0.00 0.00 2.52
42 43 1.233019 CTGGTGCTGGTCAGTCTTTG 58.767 55.000 0.00 0.00 0.00 2.77
43 44 0.819259 TGGTGCTGGTCAGTCTTTGC 60.819 55.000 0.00 0.00 0.00 3.68
47 48 2.664851 TGGTCAGTCTTTGCGCGG 60.665 61.111 8.83 0.00 0.00 6.46
48 49 2.665185 GGTCAGTCTTTGCGCGGT 60.665 61.111 8.83 0.00 0.00 5.68
50 51 2.108157 TCAGTCTTTGCGCGGTGT 59.892 55.556 8.83 0.00 0.00 4.16
52 53 1.956170 CAGTCTTTGCGCGGTGTCT 60.956 57.895 8.83 0.00 0.00 3.41
53 54 1.956170 AGTCTTTGCGCGGTGTCTG 60.956 57.895 8.83 0.00 0.00 3.51
54 55 2.108157 TCTTTGCGCGGTGTCTGT 59.892 55.556 8.83 0.00 0.00 3.41
55 56 1.522806 TCTTTGCGCGGTGTCTGTT 60.523 52.632 8.83 0.00 0.00 3.16
57 58 1.498865 CTTTGCGCGGTGTCTGTTCT 61.499 55.000 8.83 0.00 0.00 3.01
58 59 1.092921 TTTGCGCGGTGTCTGTTCTT 61.093 50.000 8.83 0.00 0.00 2.52
60 61 1.092921 TGCGCGGTGTCTGTTCTTTT 61.093 50.000 8.83 0.00 0.00 2.27
61 62 0.384353 GCGCGGTGTCTGTTCTTTTC 60.384 55.000 8.83 0.00 0.00 2.29
62 63 1.217882 CGCGGTGTCTGTTCTTTTCT 58.782 50.000 0.00 0.00 0.00 2.52
63 64 1.597663 CGCGGTGTCTGTTCTTTTCTT 59.402 47.619 0.00 0.00 0.00 2.52
64 65 2.031683 CGCGGTGTCTGTTCTTTTCTTT 59.968 45.455 0.00 0.00 0.00 2.52
68 69 3.951680 GGTGTCTGTTCTTTTCTTTCCCA 59.048 43.478 0.00 0.00 0.00 4.37
69 70 4.401202 GGTGTCTGTTCTTTTCTTTCCCAA 59.599 41.667 0.00 0.00 0.00 4.12
72 73 5.714806 TGTCTGTTCTTTTCTTTCCCAAGTT 59.285 36.000 0.00 0.00 0.00 2.66
73 74 6.210584 TGTCTGTTCTTTTCTTTCCCAAGTTT 59.789 34.615 0.00 0.00 0.00 2.66
74 75 6.531594 GTCTGTTCTTTTCTTTCCCAAGTTTG 59.468 38.462 0.00 0.00 0.00 2.93
87 88 3.941573 CCAAGTTTGGGATTGATTTGGG 58.058 45.455 2.87 0.00 44.70 4.12
88 89 3.337358 CAAGTTTGGGATTGATTTGGGC 58.663 45.455 0.00 0.00 0.00 5.36
89 90 1.550072 AGTTTGGGATTGATTTGGGCG 59.450 47.619 0.00 0.00 0.00 6.13
90 91 0.248843 TTTGGGATTGATTTGGGCGC 59.751 50.000 0.00 0.00 0.00 6.53
92 93 0.257328 TGGGATTGATTTGGGCGCTA 59.743 50.000 7.64 0.00 0.00 4.26
93 94 1.341482 TGGGATTGATTTGGGCGCTAA 60.341 47.619 7.64 0.27 0.00 3.09
94 95 1.963515 GGGATTGATTTGGGCGCTAAT 59.036 47.619 7.64 10.04 0.00 1.73
95 96 2.288395 GGGATTGATTTGGGCGCTAATG 60.288 50.000 14.67 0.00 0.00 1.90
96 97 2.622942 GGATTGATTTGGGCGCTAATGA 59.377 45.455 14.67 4.12 0.00 2.57
99 100 2.722094 TGATTTGGGCGCTAATGAACT 58.278 42.857 14.67 0.00 0.00 3.01
100 101 3.088532 TGATTTGGGCGCTAATGAACTT 58.911 40.909 14.67 0.00 0.00 2.66
101 102 3.119531 TGATTTGGGCGCTAATGAACTTG 60.120 43.478 14.67 0.00 0.00 3.16
102 103 1.904287 TTGGGCGCTAATGAACTTGT 58.096 45.000 7.64 0.00 0.00 3.16
103 104 1.904287 TGGGCGCTAATGAACTTGTT 58.096 45.000 7.64 0.00 0.00 2.83
104 105 1.810151 TGGGCGCTAATGAACTTGTTC 59.190 47.619 7.64 6.56 0.00 3.18
105 106 2.084546 GGGCGCTAATGAACTTGTTCT 58.915 47.619 7.64 0.00 0.00 3.01
107 108 2.222819 GGCGCTAATGAACTTGTTCTCG 60.223 50.000 7.64 10.08 0.00 4.04
108 109 2.412089 GCGCTAATGAACTTGTTCTCGT 59.588 45.455 13.65 3.19 0.00 4.18
110 111 3.241364 CGCTAATGAACTTGTTCTCGTCG 60.241 47.826 13.65 7.75 0.00 5.12
111 112 3.673809 GCTAATGAACTTGTTCTCGTCGT 59.326 43.478 13.65 0.00 0.00 4.34
112 113 4.150098 GCTAATGAACTTGTTCTCGTCGTT 59.850 41.667 13.65 0.00 0.00 3.85
113 114 5.333111 GCTAATGAACTTGTTCTCGTCGTTT 60.333 40.000 13.65 1.56 0.00 3.60
114 115 5.479716 AATGAACTTGTTCTCGTCGTTTT 57.520 34.783 13.65 0.00 0.00 2.43
116 117 3.000476 TGAACTTGTTCTCGTCGTTTTCG 60.000 43.478 13.65 0.00 45.64 3.46
117 118 2.533266 ACTTGTTCTCGTCGTTTTCGT 58.467 42.857 0.00 0.00 44.46 3.85
119 120 2.191815 TGTTCTCGTCGTTTTCGTCA 57.808 45.000 0.00 0.00 44.46 4.35
120 121 2.114056 TGTTCTCGTCGTTTTCGTCAG 58.886 47.619 0.00 0.00 44.46 3.51
121 122 2.114825 GTTCTCGTCGTTTTCGTCAGT 58.885 47.619 0.00 0.00 44.46 3.41
122 123 3.242706 TGTTCTCGTCGTTTTCGTCAGTA 60.243 43.478 0.00 0.00 44.46 2.74
124 125 1.974680 CTCGTCGTTTTCGTCAGTACC 59.025 52.381 0.00 0.00 44.46 3.34
125 126 1.055338 CGTCGTTTTCGTCAGTACCC 58.945 55.000 0.00 0.00 44.46 3.69
126 127 1.335324 CGTCGTTTTCGTCAGTACCCT 60.335 52.381 0.00 0.00 44.46 4.34
130 131 0.320073 TTTTCGTCAGTACCCTGCGG 60.320 55.000 0.00 0.00 38.66 5.69
131 132 2.775032 TTTCGTCAGTACCCTGCGGC 62.775 60.000 0.00 0.00 38.66 6.53
132 133 3.760035 CGTCAGTACCCTGCGGCT 61.760 66.667 0.00 0.00 38.66 5.52
133 134 2.125512 GTCAGTACCCTGCGGCTG 60.126 66.667 0.00 0.00 38.66 4.85
134 135 2.603473 TCAGTACCCTGCGGCTGT 60.603 61.111 0.00 0.00 38.66 4.40
142 143 2.513204 CTGCGGCTGTGGAGGATG 60.513 66.667 0.00 0.00 0.00 3.51
143 144 4.100084 TGCGGCTGTGGAGGATGG 62.100 66.667 0.00 0.00 0.00 3.51
144 145 4.101448 GCGGCTGTGGAGGATGGT 62.101 66.667 0.00 0.00 0.00 3.55
147 148 2.673523 GCTGTGGAGGATGGTGCT 59.326 61.111 0.00 0.00 0.00 4.40
148 149 1.001641 GCTGTGGAGGATGGTGCTT 60.002 57.895 0.00 0.00 0.00 3.91
149 150 0.253044 GCTGTGGAGGATGGTGCTTA 59.747 55.000 0.00 0.00 0.00 3.09
151 152 0.911769 TGTGGAGGATGGTGCTTAGG 59.088 55.000 0.00 0.00 0.00 2.69
152 153 0.912486 GTGGAGGATGGTGCTTAGGT 59.088 55.000 0.00 0.00 0.00 3.08
154 155 0.464554 GGAGGATGGTGCTTAGGTGC 60.465 60.000 0.00 0.00 0.00 5.01
155 156 0.811616 GAGGATGGTGCTTAGGTGCG 60.812 60.000 0.00 0.00 35.36 5.34
156 157 2.472909 GGATGGTGCTTAGGTGCGC 61.473 63.158 0.00 0.00 42.15 6.09
157 158 1.450312 GATGGTGCTTAGGTGCGCT 60.450 57.895 9.73 0.00 42.46 5.92
158 159 1.709147 GATGGTGCTTAGGTGCGCTG 61.709 60.000 9.73 0.00 42.46 5.18
159 160 3.804193 GGTGCTTAGGTGCGCTGC 61.804 66.667 9.73 0.69 42.46 5.25
160 161 4.152625 GTGCTTAGGTGCGCTGCG 62.153 66.667 19.17 19.17 40.01 5.18
171 172 3.502455 CGCTGCGCATGTGTGGAT 61.502 61.111 12.24 0.00 0.00 3.41
172 173 2.101575 GCTGCGCATGTGTGGATG 59.898 61.111 12.24 0.00 0.00 3.51
173 174 2.101575 CTGCGCATGTGTGGATGC 59.898 61.111 12.24 0.00 44.54 3.91
177 178 3.136123 GCATGTGTGGATGCGCCT 61.136 61.111 4.18 0.00 39.47 5.52
178 179 1.819208 GCATGTGTGGATGCGCCTA 60.819 57.895 4.18 0.00 39.47 3.93
179 180 2.016961 CATGTGTGGATGCGCCTAC 58.983 57.895 4.18 0.00 37.63 3.18
180 181 1.153168 ATGTGTGGATGCGCCTACC 60.153 57.895 4.18 6.28 37.63 3.18
181 182 2.890474 GTGTGGATGCGCCTACCG 60.890 66.667 4.18 0.00 37.63 4.02
182 183 3.071837 TGTGGATGCGCCTACCGA 61.072 61.111 4.18 0.00 40.02 4.69
183 184 2.421739 GTGGATGCGCCTACCGAT 59.578 61.111 4.18 0.00 40.02 4.18
184 185 1.956170 GTGGATGCGCCTACCGATG 60.956 63.158 4.18 0.00 40.02 3.84
185 186 2.357517 GGATGCGCCTACCGATGG 60.358 66.667 4.18 0.00 40.02 3.51
186 187 2.734591 GATGCGCCTACCGATGGA 59.265 61.111 4.18 0.00 40.02 3.41
187 188 1.293498 GATGCGCCTACCGATGGAT 59.707 57.895 4.18 0.00 40.02 3.41
202 203 4.416505 GATGGATCGAAGATGGATTTGC 57.583 45.455 0.00 0.00 45.12 3.68
203 204 2.212652 TGGATCGAAGATGGATTTGCG 58.787 47.619 0.00 0.00 45.12 4.85
204 205 1.069636 GGATCGAAGATGGATTTGCGC 60.070 52.381 0.00 0.00 45.12 6.09
205 206 0.947244 ATCGAAGATGGATTTGCGCC 59.053 50.000 4.18 0.00 45.12 6.53
206 207 1.010797 CGAAGATGGATTTGCGCCG 60.011 57.895 4.18 0.00 0.00 6.46
207 208 1.705337 CGAAGATGGATTTGCGCCGT 61.705 55.000 4.18 0.00 0.00 5.68
208 209 0.451783 GAAGATGGATTTGCGCCGTT 59.548 50.000 4.18 0.00 0.00 4.44
209 210 0.887933 AAGATGGATTTGCGCCGTTT 59.112 45.000 4.18 0.00 0.00 3.60
210 211 0.887933 AGATGGATTTGCGCCGTTTT 59.112 45.000 4.18 0.00 0.00 2.43
213 214 0.103208 TGGATTTGCGCCGTTTTGTT 59.897 45.000 4.18 0.00 0.00 2.83
214 215 1.213491 GGATTTGCGCCGTTTTGTTT 58.787 45.000 4.18 0.00 0.00 2.83
215 216 2.223735 TGGATTTGCGCCGTTTTGTTTA 60.224 40.909 4.18 0.00 0.00 2.01
220 221 1.268640 TGCGCCGTTTTGTTTAGTTCC 60.269 47.619 4.18 0.00 0.00 3.62
221 222 1.002142 GCGCCGTTTTGTTTAGTTCCT 60.002 47.619 0.00 0.00 0.00 3.36
222 223 2.223845 GCGCCGTTTTGTTTAGTTCCTA 59.776 45.455 0.00 0.00 0.00 2.94
223 224 3.120095 GCGCCGTTTTGTTTAGTTCCTAT 60.120 43.478 0.00 0.00 0.00 2.57
224 225 4.093261 GCGCCGTTTTGTTTAGTTCCTATA 59.907 41.667 0.00 0.00 0.00 1.31
225 226 5.553721 CGCCGTTTTGTTTAGTTCCTATAC 58.446 41.667 0.00 0.00 0.00 1.47
226 227 5.349543 CGCCGTTTTGTTTAGTTCCTATACT 59.650 40.000 0.00 0.00 0.00 2.12
229 230 7.624974 GCCGTTTTGTTTAGTTCCTATACTTCC 60.625 40.741 0.00 0.00 0.00 3.46
230 231 7.605309 CCGTTTTGTTTAGTTCCTATACTTCCT 59.395 37.037 0.00 0.00 0.00 3.36
231 232 9.643693 CGTTTTGTTTAGTTCCTATACTTCCTA 57.356 33.333 0.00 0.00 0.00 2.94
236 237 9.186837 TGTTTAGTTCCTATACTTCCTACTCTG 57.813 37.037 0.00 0.00 0.00 3.35
238 239 6.020881 AGTTCCTATACTTCCTACTCTGCT 57.979 41.667 0.00 0.00 0.00 4.24
239 240 7.151694 AGTTCCTATACTTCCTACTCTGCTA 57.848 40.000 0.00 0.00 0.00 3.49
240 241 6.999871 AGTTCCTATACTTCCTACTCTGCTAC 59.000 42.308 0.00 0.00 0.00 3.58
241 242 6.766997 TCCTATACTTCCTACTCTGCTACT 57.233 41.667 0.00 0.00 0.00 2.57
242 243 7.151694 TCCTATACTTCCTACTCTGCTACTT 57.848 40.000 0.00 0.00 0.00 2.24
243 244 8.272659 TCCTATACTTCCTACTCTGCTACTTA 57.727 38.462 0.00 0.00 0.00 2.24
244 245 8.721479 TCCTATACTTCCTACTCTGCTACTTAA 58.279 37.037 0.00 0.00 0.00 1.85
246 247 9.563748 CTATACTTCCTACTCTGCTACTTAAGT 57.436 37.037 13.68 13.68 0.00 2.24
247 248 8.826293 ATACTTCCTACTCTGCTACTTAAGTT 57.174 34.615 14.49 0.00 0.00 2.66
248 249 9.917887 ATACTTCCTACTCTGCTACTTAAGTTA 57.082 33.333 14.49 0.23 0.00 2.24
250 251 8.108364 ACTTCCTACTCTGCTACTTAAGTTAGA 58.892 37.037 14.49 13.61 0.00 2.10
252 253 8.874744 TCCTACTCTGCTACTTAAGTTAGAAA 57.125 34.615 14.49 6.22 0.00 2.52
253 254 9.476928 TCCTACTCTGCTACTTAAGTTAGAAAT 57.523 33.333 14.49 8.91 0.00 2.17
257 258 9.220767 ACTCTGCTACTTAAGTTAGAAATTTGG 57.779 33.333 14.49 5.66 0.00 3.28
258 259 9.436957 CTCTGCTACTTAAGTTAGAAATTTGGA 57.563 33.333 14.49 0.00 0.00 3.53
259 260 9.787435 TCTGCTACTTAAGTTAGAAATTTGGAA 57.213 29.630 14.49 0.00 0.00 3.53
262 263 8.459635 GCTACTTAAGTTAGAAATTTGGAAGGG 58.540 37.037 14.49 0.00 0.00 3.95
264 265 6.210784 ACTTAAGTTAGAAATTTGGAAGGGCC 59.789 38.462 1.12 0.00 37.10 5.80
265 266 4.404185 AGTTAGAAATTTGGAAGGGCCT 57.596 40.909 0.00 0.00 37.63 5.19
267 268 2.702270 AGAAATTTGGAAGGGCCTGT 57.298 45.000 6.92 0.00 37.63 4.00
268 269 2.529632 AGAAATTTGGAAGGGCCTGTC 58.470 47.619 6.92 7.01 37.63 3.51
269 270 2.158325 AGAAATTTGGAAGGGCCTGTCA 60.158 45.455 6.92 5.80 37.63 3.58
270 271 2.629017 AATTTGGAAGGGCCTGTCAT 57.371 45.000 6.92 0.00 37.63 3.06
271 272 3.756082 AATTTGGAAGGGCCTGTCATA 57.244 42.857 6.92 4.33 37.63 2.15
273 274 1.668826 TTGGAAGGGCCTGTCATACT 58.331 50.000 6.92 0.00 37.63 2.12
274 275 1.668826 TGGAAGGGCCTGTCATACTT 58.331 50.000 6.92 0.00 37.63 2.24
275 276 1.281867 TGGAAGGGCCTGTCATACTTG 59.718 52.381 6.92 0.00 37.63 3.16
276 277 1.408822 GGAAGGGCCTGTCATACTTGG 60.409 57.143 6.92 0.00 0.00 3.61
277 278 0.625849 AAGGGCCTGTCATACTTGGG 59.374 55.000 6.92 0.00 0.00 4.12
279 280 1.209621 GGGCCTGTCATACTTGGGTA 58.790 55.000 0.84 0.00 0.00 3.69
280 281 1.134189 GGGCCTGTCATACTTGGGTAC 60.134 57.143 0.84 0.00 0.00 3.34
281 282 1.557832 GGCCTGTCATACTTGGGTACA 59.442 52.381 0.00 0.00 0.00 2.90
282 283 2.026636 GGCCTGTCATACTTGGGTACAA 60.027 50.000 0.00 0.00 34.87 2.41
296 297 6.938698 TTGGGTACAAGTCTTATCTTACCA 57.061 37.500 0.00 0.00 31.38 3.25
297 298 7.504926 TTGGGTACAAGTCTTATCTTACCAT 57.495 36.000 0.00 0.00 31.38 3.55
298 299 7.504926 TGGGTACAAGTCTTATCTTACCATT 57.495 36.000 0.00 0.00 31.38 3.16
299 300 7.924541 TGGGTACAAGTCTTATCTTACCATTT 58.075 34.615 0.00 0.00 31.38 2.32
302 303 9.227777 GGTACAAGTCTTATCTTACCATTTTGT 57.772 33.333 0.00 0.00 30.63 2.83
306 307 9.965824 CAAGTCTTATCTTACCATTTTGTTGTT 57.034 29.630 0.00 0.00 0.00 2.83
307 308 9.965824 AAGTCTTATCTTACCATTTTGTTGTTG 57.034 29.630 0.00 0.00 0.00 3.33
308 309 9.131791 AGTCTTATCTTACCATTTTGTTGTTGT 57.868 29.630 0.00 0.00 0.00 3.32
310 311 9.349713 TCTTATCTTACCATTTTGTTGTTGTCT 57.650 29.630 0.00 0.00 0.00 3.41
312 313 9.743057 TTATCTTACCATTTTGTTGTTGTCTTG 57.257 29.630 0.00 0.00 0.00 3.02
313 314 7.164230 TCTTACCATTTTGTTGTTGTCTTGT 57.836 32.000 0.00 0.00 0.00 3.16
314 315 7.607250 TCTTACCATTTTGTTGTTGTCTTGTT 58.393 30.769 0.00 0.00 0.00 2.83
317 318 5.868801 ACCATTTTGTTGTTGTCTTGTTCAG 59.131 36.000 0.00 0.00 0.00 3.02
318 319 5.868801 CCATTTTGTTGTTGTCTTGTTCAGT 59.131 36.000 0.00 0.00 0.00 3.41
319 320 6.368516 CCATTTTGTTGTTGTCTTGTTCAGTT 59.631 34.615 0.00 0.00 0.00 3.16
320 321 6.761731 TTTTGTTGTTGTCTTGTTCAGTTG 57.238 33.333 0.00 0.00 0.00 3.16
321 322 4.433186 TGTTGTTGTCTTGTTCAGTTGG 57.567 40.909 0.00 0.00 0.00 3.77
323 324 2.374184 TGTTGTCTTGTTCAGTTGGGG 58.626 47.619 0.00 0.00 0.00 4.96
324 325 2.291282 TGTTGTCTTGTTCAGTTGGGGT 60.291 45.455 0.00 0.00 0.00 4.95
326 327 3.094484 TGTCTTGTTCAGTTGGGGTTT 57.906 42.857 0.00 0.00 0.00 3.27
327 328 4.237976 TGTCTTGTTCAGTTGGGGTTTA 57.762 40.909 0.00 0.00 0.00 2.01
328 329 4.204012 TGTCTTGTTCAGTTGGGGTTTAG 58.796 43.478 0.00 0.00 0.00 1.85
330 331 4.885325 GTCTTGTTCAGTTGGGGTTTAGAA 59.115 41.667 0.00 0.00 0.00 2.10
331 332 5.535030 GTCTTGTTCAGTTGGGGTTTAGAAT 59.465 40.000 0.00 0.00 0.00 2.40
332 333 5.534654 TCTTGTTCAGTTGGGGTTTAGAATG 59.465 40.000 0.00 0.00 0.00 2.67
333 334 4.798882 TGTTCAGTTGGGGTTTAGAATGT 58.201 39.130 0.00 0.00 0.00 2.71
337 338 4.104102 TCAGTTGGGGTTTAGAATGTCTGT 59.896 41.667 0.00 0.00 0.00 3.41
338 339 4.455877 CAGTTGGGGTTTAGAATGTCTGTC 59.544 45.833 0.00 0.00 0.00 3.51
339 340 4.351111 AGTTGGGGTTTAGAATGTCTGTCT 59.649 41.667 0.00 0.00 0.00 3.41
343 344 5.070685 GGGGTTTAGAATGTCTGTCTGTTT 58.929 41.667 0.00 0.00 0.00 2.83
345 346 5.531287 GGGTTTAGAATGTCTGTCTGTTTGT 59.469 40.000 0.00 0.00 0.00 2.83
346 347 6.039382 GGGTTTAGAATGTCTGTCTGTTTGTT 59.961 38.462 0.00 0.00 0.00 2.83
348 349 7.432252 GGTTTAGAATGTCTGTCTGTTTGTTTG 59.568 37.037 0.00 0.00 0.00 2.93
349 350 7.624360 TTAGAATGTCTGTCTGTTTGTTTGT 57.376 32.000 0.00 0.00 0.00 2.83
352 353 4.875544 TGTCTGTCTGTTTGTTTGTAGC 57.124 40.909 0.00 0.00 0.00 3.58
353 354 4.257731 TGTCTGTCTGTTTGTTTGTAGCA 58.742 39.130 0.00 0.00 0.00 3.49
354 355 4.332543 TGTCTGTCTGTTTGTTTGTAGCAG 59.667 41.667 0.00 0.00 0.00 4.24
355 356 3.312421 TCTGTCTGTTTGTTTGTAGCAGC 59.688 43.478 0.00 0.00 0.00 5.25
356 357 3.013219 TGTCTGTTTGTTTGTAGCAGCA 58.987 40.909 0.00 0.00 0.00 4.41
357 358 3.065233 TGTCTGTTTGTTTGTAGCAGCAG 59.935 43.478 0.00 0.00 0.00 4.24
358 359 2.033299 TCTGTTTGTTTGTAGCAGCAGC 59.967 45.455 0.00 0.00 42.56 5.25
370 371 2.626088 GCAGCAGCTTTGGAGTTTAG 57.374 50.000 0.00 0.00 37.91 1.85
371 372 2.154462 GCAGCAGCTTTGGAGTTTAGA 58.846 47.619 0.00 0.00 37.91 2.10
372 373 2.095516 GCAGCAGCTTTGGAGTTTAGAC 60.096 50.000 0.00 0.00 37.91 2.59
373 374 3.406764 CAGCAGCTTTGGAGTTTAGACT 58.593 45.455 0.00 0.00 39.32 3.24
374 375 3.188048 CAGCAGCTTTGGAGTTTAGACTG 59.812 47.826 0.00 0.00 35.88 3.51
376 377 3.187432 GCAGCTTTGGAGTTTAGACTGTC 59.813 47.826 0.00 0.00 35.88 3.51
377 378 4.636249 CAGCTTTGGAGTTTAGACTGTCT 58.364 43.478 15.57 15.57 35.88 3.41
378 379 4.450419 CAGCTTTGGAGTTTAGACTGTCTG 59.550 45.833 20.19 0.63 35.88 3.51
379 380 4.101741 AGCTTTGGAGTTTAGACTGTCTGT 59.898 41.667 20.19 2.29 35.88 3.41
380 381 5.304614 AGCTTTGGAGTTTAGACTGTCTGTA 59.695 40.000 20.19 5.53 35.88 2.74
382 383 6.091441 GCTTTGGAGTTTAGACTGTCTGTATG 59.909 42.308 20.19 1.48 35.88 2.39
384 385 6.911250 TGGAGTTTAGACTGTCTGTATGAA 57.089 37.500 20.19 3.27 35.88 2.57
385 386 6.688578 TGGAGTTTAGACTGTCTGTATGAAC 58.311 40.000 20.19 14.73 36.86 3.18
386 387 5.800941 GGAGTTTAGACTGTCTGTATGAACG 59.199 44.000 20.19 0.00 40.05 3.95
387 388 6.328641 AGTTTAGACTGTCTGTATGAACGT 57.671 37.500 20.19 0.00 40.05 3.99
389 390 3.577649 AGACTGTCTGTATGAACGTGG 57.422 47.619 10.00 0.00 0.00 4.94
390 391 3.154710 AGACTGTCTGTATGAACGTGGA 58.845 45.455 10.00 0.00 0.00 4.02
391 392 3.057456 AGACTGTCTGTATGAACGTGGAC 60.057 47.826 10.00 0.00 0.00 4.02
395 396 0.528924 CTGTATGAACGTGGACGGGA 59.471 55.000 3.93 0.00 44.95 5.14
396 397 1.136305 CTGTATGAACGTGGACGGGAT 59.864 52.381 3.93 0.00 44.95 3.85
400 401 0.393448 TGAACGTGGACGGGATTTGA 59.607 50.000 3.93 0.00 44.95 2.69
401 402 1.202663 TGAACGTGGACGGGATTTGAA 60.203 47.619 3.93 0.00 44.95 2.69
402 403 2.081462 GAACGTGGACGGGATTTGAAT 58.919 47.619 3.93 0.00 44.95 2.57
404 405 2.510613 ACGTGGACGGGATTTGAATTT 58.489 42.857 3.93 0.00 44.95 1.82
405 406 2.227865 ACGTGGACGGGATTTGAATTTG 59.772 45.455 3.93 0.00 44.95 2.32
406 407 2.606108 GTGGACGGGATTTGAATTTGC 58.394 47.619 0.00 0.00 0.00 3.68
407 408 2.231235 GTGGACGGGATTTGAATTTGCT 59.769 45.455 0.00 0.00 0.00 3.91
408 409 2.896685 TGGACGGGATTTGAATTTGCTT 59.103 40.909 0.00 0.00 0.00 3.91
409 410 4.082463 GTGGACGGGATTTGAATTTGCTTA 60.082 41.667 0.00 0.00 0.00 3.09
410 411 4.524714 TGGACGGGATTTGAATTTGCTTAA 59.475 37.500 0.00 0.00 0.00 1.85
411 412 4.862574 GGACGGGATTTGAATTTGCTTAAC 59.137 41.667 0.00 0.00 0.00 2.01
412 413 5.336451 GGACGGGATTTGAATTTGCTTAACT 60.336 40.000 0.00 0.00 0.00 2.24
413 414 5.469479 ACGGGATTTGAATTTGCTTAACTG 58.531 37.500 0.00 0.00 0.00 3.16
414 415 5.242838 ACGGGATTTGAATTTGCTTAACTGA 59.757 36.000 0.00 0.00 0.00 3.41
415 416 6.155827 CGGGATTTGAATTTGCTTAACTGAA 58.844 36.000 0.00 0.00 0.00 3.02
428 429 5.757850 CTTAACTGAAGCCTTGAAAGTGT 57.242 39.130 0.00 0.00 0.00 3.55
429 430 6.861065 CTTAACTGAAGCCTTGAAAGTGTA 57.139 37.500 0.00 0.00 0.00 2.90
430 431 6.613755 TTAACTGAAGCCTTGAAAGTGTAC 57.386 37.500 0.00 0.00 0.00 2.90
431 432 4.423625 ACTGAAGCCTTGAAAGTGTACT 57.576 40.909 0.00 0.00 0.00 2.73
432 433 4.781934 ACTGAAGCCTTGAAAGTGTACTT 58.218 39.130 0.00 0.00 37.91 2.24
433 434 5.925509 ACTGAAGCCTTGAAAGTGTACTTA 58.074 37.500 0.00 0.00 34.61 2.24
437 438 6.204688 TGAAGCCTTGAAAGTGTACTTATGTG 59.795 38.462 0.00 0.00 34.61 3.21
438 439 5.865085 AGCCTTGAAAGTGTACTTATGTGA 58.135 37.500 0.00 0.00 34.61 3.58
439 440 5.701290 AGCCTTGAAAGTGTACTTATGTGAC 59.299 40.000 0.00 0.00 34.61 3.67
441 442 6.347725 GCCTTGAAAGTGTACTTATGTGACTG 60.348 42.308 0.00 0.00 34.61 3.51
443 444 5.547465 TGAAAGTGTACTTATGTGACTGGG 58.453 41.667 0.00 0.00 34.61 4.45
444 445 5.305902 TGAAAGTGTACTTATGTGACTGGGA 59.694 40.000 0.00 0.00 34.61 4.37
445 446 5.407407 AAGTGTACTTATGTGACTGGGAG 57.593 43.478 0.00 0.00 33.79 4.30
446 447 4.673968 AGTGTACTTATGTGACTGGGAGA 58.326 43.478 0.00 0.00 0.00 3.71
447 448 4.463186 AGTGTACTTATGTGACTGGGAGAC 59.537 45.833 0.00 0.00 0.00 3.36
449 450 4.705507 TGTACTTATGTGACTGGGAGACTC 59.294 45.833 0.00 0.00 0.00 3.36
451 452 5.194473 ACTTATGTGACTGGGAGACTCTA 57.806 43.478 1.74 0.00 0.00 2.43
452 453 5.772004 ACTTATGTGACTGGGAGACTCTAT 58.228 41.667 1.74 0.00 0.00 1.98
453 454 6.198639 ACTTATGTGACTGGGAGACTCTATT 58.801 40.000 1.74 0.00 0.00 1.73
454 455 6.670027 ACTTATGTGACTGGGAGACTCTATTT 59.330 38.462 1.74 0.00 0.00 1.40
455 456 5.606348 ATGTGACTGGGAGACTCTATTTC 57.394 43.478 1.74 0.00 0.00 2.17
456 457 3.444034 TGTGACTGGGAGACTCTATTTCG 59.556 47.826 1.74 0.00 0.00 3.46
457 458 3.444388 GTGACTGGGAGACTCTATTTCGT 59.556 47.826 1.74 0.00 0.00 3.85
458 459 3.444034 TGACTGGGAGACTCTATTTCGTG 59.556 47.826 1.74 0.00 0.00 4.35
459 460 3.695060 GACTGGGAGACTCTATTTCGTGA 59.305 47.826 1.74 0.00 0.00 4.35
460 461 3.697045 ACTGGGAGACTCTATTTCGTGAG 59.303 47.826 1.74 0.00 36.47 3.51
462 463 2.427453 GGGAGACTCTATTTCGTGAGCA 59.573 50.000 1.74 0.00 33.92 4.26
463 464 3.490078 GGGAGACTCTATTTCGTGAGCAG 60.490 52.174 1.74 0.00 33.92 4.24
464 465 3.490078 GGAGACTCTATTTCGTGAGCAGG 60.490 52.174 1.74 0.00 33.92 4.85
465 466 3.357203 AGACTCTATTTCGTGAGCAGGA 58.643 45.455 0.00 0.00 33.92 3.86
490 4224 3.131577 TCCCATTCTTGACGCGTTAGTAT 59.868 43.478 15.53 10.69 0.00 2.12
567 4303 1.447140 GAACTCGGCGGTATGTGCA 60.447 57.895 7.21 0.00 0.00 4.57
582 4318 0.168128 GTGCACGTAGGCAATCAACC 59.832 55.000 0.00 0.00 46.93 3.77
583 4319 0.036164 TGCACGTAGGCAATCAACCT 59.964 50.000 0.00 0.00 41.65 3.50
585 4321 1.676014 GCACGTAGGCAATCAACCTCT 60.676 52.381 0.00 0.00 38.81 3.69
586 4322 2.271800 CACGTAGGCAATCAACCTCTC 58.728 52.381 0.00 0.00 38.81 3.20
587 4323 2.093973 CACGTAGGCAATCAACCTCTCT 60.094 50.000 0.00 0.00 38.81 3.10
588 4324 2.166664 ACGTAGGCAATCAACCTCTCTC 59.833 50.000 0.00 0.00 38.81 3.20
589 4325 2.428890 CGTAGGCAATCAACCTCTCTCT 59.571 50.000 0.00 0.00 38.81 3.10
590 4326 3.118956 CGTAGGCAATCAACCTCTCTCTT 60.119 47.826 0.00 0.00 38.81 2.85
591 4327 4.621747 CGTAGGCAATCAACCTCTCTCTTT 60.622 45.833 0.00 0.00 38.81 2.52
592 4328 3.949132 AGGCAATCAACCTCTCTCTTTC 58.051 45.455 0.00 0.00 28.76 2.62
593 4329 3.586618 AGGCAATCAACCTCTCTCTTTCT 59.413 43.478 0.00 0.00 28.76 2.52
594 4330 3.688673 GGCAATCAACCTCTCTCTTTCTG 59.311 47.826 0.00 0.00 0.00 3.02
596 4332 3.625649 ATCAACCTCTCTCTTTCTGCC 57.374 47.619 0.00 0.00 0.00 4.85
608 4350 3.025978 TCTTTCTGCCTAATTGCATGGG 58.974 45.455 0.00 0.00 41.16 4.00
627 4518 7.377398 GCATGGGCAAACACATAATGATAATA 58.623 34.615 0.00 0.00 40.72 0.98
628 4519 7.871973 GCATGGGCAAACACATAATGATAATAA 59.128 33.333 0.00 0.00 40.72 1.40
681 4573 5.408299 GGAATGCAACAAAGGTAACCATTTC 59.592 40.000 0.00 0.00 37.17 2.17
695 4587 6.149807 GGTAACCATTTCGATTTGGAGTTACA 59.850 38.462 18.21 0.00 36.79 2.41
696 4588 6.834168 AACCATTTCGATTTGGAGTTACAT 57.166 33.333 18.21 0.00 36.79 2.29
697 4589 6.834168 ACCATTTCGATTTGGAGTTACATT 57.166 33.333 18.21 0.00 36.79 2.71
699 4591 7.666623 ACCATTTCGATTTGGAGTTACATTTT 58.333 30.769 18.21 0.00 36.79 1.82
700 4592 8.147704 ACCATTTCGATTTGGAGTTACATTTTT 58.852 29.630 18.21 0.00 36.79 1.94
719 4611 4.400529 TTTTCTTTCTTGAAGCCCAACC 57.599 40.909 0.00 0.00 35.24 3.77
778 4671 5.300792 AGGAAAAAGCGGACAGTTCATAAAA 59.699 36.000 0.00 0.00 0.00 1.52
825 4718 2.045536 GCCCTCCTGCCACAGAAG 60.046 66.667 0.00 0.00 32.44 2.85
872 4765 0.176910 TGACCGCTCACAAGTCACAA 59.823 50.000 0.00 0.00 35.67 3.33
890 4783 2.770048 CCATCCTCCCCTCCGCTT 60.770 66.667 0.00 0.00 0.00 4.68
917 4810 1.227556 GCCTGCCTATACACCCACG 60.228 63.158 0.00 0.00 0.00 4.94
954 4847 4.862574 GGTTTCCACAACAGAAGAACAAAC 59.137 41.667 0.00 0.00 0.00 2.93
977 4870 5.073144 ACATCTTTTGTCTTGGGTTAGGAGA 59.927 40.000 0.00 0.00 30.89 3.71
1010 4903 0.830648 CCAAGAGAGATGGCCGGTAA 59.169 55.000 1.90 0.00 0.00 2.85
1017 4910 0.107654 AGATGGCCGGTAAGCTTCAC 60.108 55.000 0.00 0.00 0.00 3.18
1033 4926 3.423123 GCTTCACTGTACCGTTTGATTCG 60.423 47.826 0.00 0.00 0.00 3.34
1037 4930 3.982701 CACTGTACCGTTTGATTCGTGTA 59.017 43.478 0.00 0.00 0.00 2.90
1042 4935 3.666274 ACCGTTTGATTCGTGTATTGGA 58.334 40.909 0.00 0.00 0.00 3.53
1076 4969 5.801947 GCTAGTTTGTGCTTGTGATTTATGG 59.198 40.000 0.00 0.00 0.00 2.74
1080 4973 5.627499 TTGTGCTTGTGATTTATGGTCTC 57.373 39.130 0.00 0.00 0.00 3.36
1096 4989 2.554564 GGTCTCCGGGGTGAAATTTCTT 60.555 50.000 18.64 0.00 0.00 2.52
1177 5070 0.970640 TACTGGCAAGCGTCACCTTA 59.029 50.000 0.00 0.00 0.00 2.69
1178 5071 0.324943 ACTGGCAAGCGTCACCTTAT 59.675 50.000 0.00 0.00 0.00 1.73
1179 5072 0.729116 CTGGCAAGCGTCACCTTATG 59.271 55.000 0.00 0.00 0.00 1.90
1180 5073 0.323302 TGGCAAGCGTCACCTTATGA 59.677 50.000 0.00 0.00 33.79 2.15
1181 5074 1.271108 TGGCAAGCGTCACCTTATGAA 60.271 47.619 0.00 0.00 39.72 2.57
1241 5774 3.678289 TCTTTGCTCTGCTATTTGCTGA 58.322 40.909 0.46 0.46 45.30 4.26
1316 5863 4.555610 GCAGGAGCAATGGAGGAG 57.444 61.111 0.00 0.00 41.58 3.69
1341 5900 0.811616 GGAGCATGTCAGGGTAAGCG 60.812 60.000 0.00 0.00 0.00 4.68
1343 5902 0.176680 AGCATGTCAGGGTAAGCGAG 59.823 55.000 0.00 0.00 0.00 5.03
1365 5925 0.472471 GCCCAATCCGATCCAACCTA 59.528 55.000 0.00 0.00 0.00 3.08
1370 5930 3.059884 CAATCCGATCCAACCTATCGTG 58.940 50.000 4.95 0.00 43.63 4.35
1389 5961 1.372997 TCCTGCTCGTTCTTGCGTC 60.373 57.895 0.00 0.00 0.00 5.19
1391 5963 2.357034 TGCTCGTTCTTGCGTCCC 60.357 61.111 0.00 0.00 0.00 4.46
1412 5986 3.058983 CCATTCGATCTCTCTCTGAGTCG 60.059 52.174 4.32 6.44 43.13 4.18
1459 6039 2.582498 CCGCCCAAGATCGACGTC 60.582 66.667 5.18 5.18 0.00 4.34
1483 6063 0.103026 CGCTCTGCCTGCTGTACATA 59.897 55.000 0.00 0.00 0.00 2.29
1683 6307 1.004918 CTCCCGTGAACCAGTGGAC 60.005 63.158 18.40 10.10 0.00 4.02
1739 6411 3.231207 ACTACATGATCTACGCCTCCT 57.769 47.619 0.00 0.00 0.00 3.69
1764 6454 2.024590 GACGGGTATGCGGGCTACTT 62.025 60.000 0.00 0.00 0.00 2.24
1775 6465 2.225792 GGCTACTTGGGCCTGATCT 58.774 57.895 4.53 0.00 45.57 2.75
1862 6556 3.299340 TCTTGTGCTCGTAGTTCCTTC 57.701 47.619 0.00 0.00 0.00 3.46
1920 6638 2.956333 GCCTTTAACCAGTCCTGTTGTT 59.044 45.455 0.00 0.00 0.00 2.83
1962 6699 0.302890 CTTTGCTTAGCTGCGGATCG 59.697 55.000 5.60 0.00 35.36 3.69
1963 6700 0.108377 TTTGCTTAGCTGCGGATCGA 60.108 50.000 5.60 0.00 35.36 3.59
1967 6723 0.600557 CTTAGCTGCGGATCGAGGAT 59.399 55.000 0.00 0.00 0.00 3.24
1996 6752 2.550830 TCTTGGAACCTGAAGAGTGC 57.449 50.000 0.00 0.00 0.00 4.40
2021 6777 1.072965 CTGAAGAAGGGCCAGACTTGT 59.927 52.381 6.18 0.00 0.00 3.16
2023 6779 2.091885 TGAAGAAGGGCCAGACTTGTTT 60.092 45.455 6.18 0.00 32.40 2.83
2025 6781 2.587522 AGAAGGGCCAGACTTGTTTTC 58.412 47.619 6.18 0.00 0.00 2.29
2026 6782 2.175715 AGAAGGGCCAGACTTGTTTTCT 59.824 45.455 6.18 0.00 0.00 2.52
2027 6783 1.986882 AGGGCCAGACTTGTTTTCTG 58.013 50.000 6.18 0.00 40.30 3.02
2028 6784 1.215423 AGGGCCAGACTTGTTTTCTGT 59.785 47.619 6.18 0.00 39.15 3.41
2067 6858 6.109359 GCTATGAGTATGTTGTTGGTTCTCT 58.891 40.000 0.00 0.00 0.00 3.10
2106 6897 4.221262 TCAGGAAGGATTTGGCTTCATTTG 59.779 41.667 0.00 0.00 0.00 2.32
2126 6917 2.241176 TGGGGGACAGGATTAATGTGTC 59.759 50.000 15.07 15.07 39.96 3.67
2141 6932 7.667043 TTAATGTGTCAGTACCTGATGTTTC 57.333 36.000 0.00 0.00 42.73 2.78
2150 6942 5.907391 CAGTACCTGATGTTTCGTGAAAAAC 59.093 40.000 0.00 0.00 35.40 2.43
2151 6943 5.820947 AGTACCTGATGTTTCGTGAAAAACT 59.179 36.000 0.00 0.00 39.39 2.66
2153 6945 5.961272 ACCTGATGTTTCGTGAAAAACTTT 58.039 33.333 0.00 0.00 39.39 2.66
2154 6946 6.394809 ACCTGATGTTTCGTGAAAAACTTTT 58.605 32.000 0.00 0.00 39.39 2.27
2155 6947 6.530181 ACCTGATGTTTCGTGAAAAACTTTTC 59.470 34.615 7.79 7.79 45.13 2.29
2179 6971 8.110860 TCTTTAGGGAATGTTTCATGAAGAAC 57.889 34.615 8.41 5.80 35.56 3.01
2203 6995 8.237811 ACTTGTTATGGGGATGTGATAATTTC 57.762 34.615 0.00 0.00 0.00 2.17
2209 7001 3.004734 GGGGATGTGATAATTTCCTTGCG 59.995 47.826 0.00 0.00 0.00 4.85
2215 7007 5.226396 TGTGATAATTTCCTTGCGTTTTGG 58.774 37.500 0.00 0.00 0.00 3.28
2216 7008 4.625311 GTGATAATTTCCTTGCGTTTTGGG 59.375 41.667 0.00 0.00 0.00 4.12
2217 7009 2.542020 AATTTCCTTGCGTTTTGGGG 57.458 45.000 0.00 0.00 0.00 4.96
2218 7010 1.419381 ATTTCCTTGCGTTTTGGGGT 58.581 45.000 0.00 0.00 0.00 4.95
2219 7011 1.196012 TTTCCTTGCGTTTTGGGGTT 58.804 45.000 0.00 0.00 0.00 4.11
2220 7012 2.068834 TTCCTTGCGTTTTGGGGTTA 57.931 45.000 0.00 0.00 0.00 2.85
2221 7013 1.320507 TCCTTGCGTTTTGGGGTTAC 58.679 50.000 0.00 0.00 0.00 2.50
2222 7014 1.033574 CCTTGCGTTTTGGGGTTACA 58.966 50.000 0.00 0.00 0.00 2.41
2223 7015 1.409427 CCTTGCGTTTTGGGGTTACAA 59.591 47.619 0.00 0.00 0.00 2.41
2224 7016 2.544903 CCTTGCGTTTTGGGGTTACAAG 60.545 50.000 0.00 0.00 34.30 3.16
2225 7017 0.386113 TGCGTTTTGGGGTTACAAGC 59.614 50.000 0.00 0.00 0.00 4.01
2226 7018 0.319211 GCGTTTTGGGGTTACAAGCC 60.319 55.000 1.44 1.44 45.69 4.35
2269 7061 2.492773 CCTTGCCGGGCATTGGATC 61.493 63.158 27.39 0.00 38.76 3.36
2282 7074 3.181483 GCATTGGATCCTTGGTTCATGTC 60.181 47.826 14.23 0.00 0.00 3.06
2287 7079 3.432186 GGATCCTTGGTTCATGTCGATGA 60.432 47.826 3.84 0.00 36.78 2.92
2302 7094 4.403752 TGTCGATGAGGATGTGATCTTCTT 59.596 41.667 0.00 0.00 36.45 2.52
2303 7095 4.981674 GTCGATGAGGATGTGATCTTCTTC 59.018 45.833 0.00 0.00 36.45 2.87
2304 7096 4.038522 TCGATGAGGATGTGATCTTCTTCC 59.961 45.833 12.15 12.15 36.70 3.46
2427 7219 2.028925 CAAAACACTTGGGCGGCC 59.971 61.111 23.42 23.42 0.00 6.13
2446 7238 2.290641 GCCTGGGCGTTATTGACTTATG 59.709 50.000 0.00 0.00 0.00 1.90
2566 7358 4.196372 CCAAGCTTTTGGGAGCCA 57.804 55.556 0.00 0.00 43.74 4.75
2747 7539 1.495951 GATGAACGACGTTGTGGGC 59.504 57.895 19.60 3.56 0.00 5.36
2856 7648 1.901159 CCATTTGGGCTTGGAATGTGA 59.099 47.619 0.00 0.00 34.81 3.58
2857 7649 2.502538 CCATTTGGGCTTGGAATGTGAT 59.497 45.455 0.00 0.00 34.81 3.06
2900 7692 3.419915 CGCATACAAGATGCTTTGTGAC 58.580 45.455 7.84 2.12 41.18 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 3.118482 ACCAGGATCATGTACAGCTTGAG 60.118 47.826 6.62 0.00 35.20 3.02
6 7 2.840038 ACCAGGATCATGTACAGCTTGA 59.160 45.455 6.62 0.33 36.01 3.02
7 8 2.941064 CACCAGGATCATGTACAGCTTG 59.059 50.000 6.62 0.00 0.00 4.01
8 9 2.681976 GCACCAGGATCATGTACAGCTT 60.682 50.000 6.62 0.00 0.00 3.74
9 10 1.134280 GCACCAGGATCATGTACAGCT 60.134 52.381 6.62 0.00 0.00 4.24
10 11 1.134280 AGCACCAGGATCATGTACAGC 60.134 52.381 6.62 4.75 0.00 4.40
11 12 2.558378 CAGCACCAGGATCATGTACAG 58.442 52.381 6.62 0.00 0.00 2.74
12 13 1.210234 CCAGCACCAGGATCATGTACA 59.790 52.381 6.62 0.00 0.00 2.90
13 14 1.210478 ACCAGCACCAGGATCATGTAC 59.790 52.381 6.62 0.00 0.00 2.90
14 15 1.486310 GACCAGCACCAGGATCATGTA 59.514 52.381 6.62 0.00 0.00 2.29
15 16 0.254178 GACCAGCACCAGGATCATGT 59.746 55.000 6.62 0.00 0.00 3.21
16 17 0.253894 TGACCAGCACCAGGATCATG 59.746 55.000 0.00 0.00 0.00 3.07
17 18 0.545171 CTGACCAGCACCAGGATCAT 59.455 55.000 0.00 0.00 0.00 2.45
18 19 0.837691 ACTGACCAGCACCAGGATCA 60.838 55.000 0.00 0.00 34.85 2.92
19 20 0.107945 GACTGACCAGCACCAGGATC 60.108 60.000 0.00 0.00 34.85 3.36
20 21 0.546267 AGACTGACCAGCACCAGGAT 60.546 55.000 0.00 0.00 34.85 3.24
23 24 1.233019 CAAAGACTGACCAGCACCAG 58.767 55.000 0.00 0.00 36.53 4.00
24 25 0.819259 GCAAAGACTGACCAGCACCA 60.819 55.000 0.00 0.00 0.00 4.17
25 26 1.845809 CGCAAAGACTGACCAGCACC 61.846 60.000 0.00 0.00 0.00 5.01
27 28 2.253758 GCGCAAAGACTGACCAGCA 61.254 57.895 0.30 0.00 0.00 4.41
28 29 2.558313 GCGCAAAGACTGACCAGC 59.442 61.111 0.30 0.00 0.00 4.85
30 31 2.664851 CCGCGCAAAGACTGACCA 60.665 61.111 8.75 0.00 0.00 4.02
31 32 2.665185 ACCGCGCAAAGACTGACC 60.665 61.111 8.75 0.00 0.00 4.02
35 36 1.956170 CAGACACCGCGCAAAGACT 60.956 57.895 8.75 0.00 0.00 3.24
36 37 1.772063 AACAGACACCGCGCAAAGAC 61.772 55.000 8.75 0.00 0.00 3.01
37 38 1.495584 GAACAGACACCGCGCAAAGA 61.496 55.000 8.75 0.00 0.00 2.52
38 39 1.082756 GAACAGACACCGCGCAAAG 60.083 57.895 8.75 0.00 0.00 2.77
39 40 1.092921 AAGAACAGACACCGCGCAAA 61.093 50.000 8.75 0.00 0.00 3.68
40 41 1.092921 AAAGAACAGACACCGCGCAA 61.093 50.000 8.75 0.00 0.00 4.85
41 42 1.092921 AAAAGAACAGACACCGCGCA 61.093 50.000 8.75 0.00 0.00 6.09
42 43 0.384353 GAAAAGAACAGACACCGCGC 60.384 55.000 0.00 0.00 0.00 6.86
43 44 1.217882 AGAAAAGAACAGACACCGCG 58.782 50.000 0.00 0.00 0.00 6.46
47 48 5.125578 ACTTGGGAAAGAAAAGAACAGACAC 59.874 40.000 0.00 0.00 0.00 3.67
48 49 5.261216 ACTTGGGAAAGAAAAGAACAGACA 58.739 37.500 0.00 0.00 0.00 3.41
50 51 6.350949 CCAAACTTGGGAAAGAAAAGAACAGA 60.351 38.462 0.09 0.00 44.70 3.41
52 53 5.729510 CCAAACTTGGGAAAGAAAAGAACA 58.270 37.500 0.09 0.00 44.70 3.18
68 69 2.028203 CGCCCAAATCAATCCCAAACTT 60.028 45.455 0.00 0.00 0.00 2.66
69 70 1.550072 CGCCCAAATCAATCCCAAACT 59.450 47.619 0.00 0.00 0.00 2.66
72 73 0.614415 AGCGCCCAAATCAATCCCAA 60.614 50.000 2.29 0.00 0.00 4.12
73 74 0.257328 TAGCGCCCAAATCAATCCCA 59.743 50.000 2.29 0.00 0.00 4.37
74 75 1.398692 TTAGCGCCCAAATCAATCCC 58.601 50.000 2.29 0.00 0.00 3.85
75 76 2.622942 TCATTAGCGCCCAAATCAATCC 59.377 45.455 2.29 0.00 0.00 3.01
76 77 3.988379 TCATTAGCGCCCAAATCAATC 57.012 42.857 2.29 0.00 0.00 2.67
77 78 3.701040 AGTTCATTAGCGCCCAAATCAAT 59.299 39.130 2.29 0.00 0.00 2.57
78 79 3.088532 AGTTCATTAGCGCCCAAATCAA 58.911 40.909 2.29 0.00 0.00 2.57
79 80 2.722094 AGTTCATTAGCGCCCAAATCA 58.278 42.857 2.29 0.00 0.00 2.57
80 81 3.119495 ACAAGTTCATTAGCGCCCAAATC 60.119 43.478 2.29 0.00 0.00 2.17
81 82 2.825532 ACAAGTTCATTAGCGCCCAAAT 59.174 40.909 2.29 0.00 0.00 2.32
84 85 1.810151 GAACAAGTTCATTAGCGCCCA 59.190 47.619 2.29 0.00 39.31 5.36
85 86 2.084546 AGAACAAGTTCATTAGCGCCC 58.915 47.619 14.69 0.00 41.84 6.13
86 87 2.222819 CGAGAACAAGTTCATTAGCGCC 60.223 50.000 14.69 0.00 41.84 6.53
87 88 2.412089 ACGAGAACAAGTTCATTAGCGC 59.588 45.455 14.69 0.00 41.84 5.92
88 89 3.241364 CGACGAGAACAAGTTCATTAGCG 60.241 47.826 14.69 11.38 41.84 4.26
89 90 3.673809 ACGACGAGAACAAGTTCATTAGC 59.326 43.478 14.69 0.63 41.84 3.09
90 91 5.824243 AACGACGAGAACAAGTTCATTAG 57.176 39.130 14.69 5.79 41.84 1.73
92 93 5.479716 AAAACGACGAGAACAAGTTCATT 57.520 34.783 14.69 0.00 41.84 2.57
93 94 4.317839 CGAAAACGACGAGAACAAGTTCAT 60.318 41.667 14.69 0.59 41.84 2.57
94 95 3.000476 CGAAAACGACGAGAACAAGTTCA 60.000 43.478 14.69 0.00 41.84 3.18
95 96 3.000376 ACGAAAACGACGAGAACAAGTTC 60.000 43.478 0.00 4.82 39.78 3.01
96 97 2.925563 ACGAAAACGACGAGAACAAGTT 59.074 40.909 0.00 0.00 34.70 2.66
99 100 2.528125 TGACGAAAACGACGAGAACAA 58.472 42.857 0.00 0.00 34.70 2.83
100 101 2.114056 CTGACGAAAACGACGAGAACA 58.886 47.619 0.00 0.00 34.70 3.18
101 102 2.114825 ACTGACGAAAACGACGAGAAC 58.885 47.619 0.00 0.00 34.70 3.01
102 103 2.480224 ACTGACGAAAACGACGAGAA 57.520 45.000 0.00 0.00 34.70 2.87
103 104 2.349817 GGTACTGACGAAAACGACGAGA 60.350 50.000 0.00 0.00 34.70 4.04
104 105 1.974680 GGTACTGACGAAAACGACGAG 59.025 52.381 0.00 0.00 34.70 4.18
105 106 1.334960 GGGTACTGACGAAAACGACGA 60.335 52.381 0.00 0.00 34.70 4.20
107 108 2.428888 AGGGTACTGACGAAAACGAC 57.571 50.000 0.00 0.00 0.00 4.34
125 126 2.513204 CATCCTCCACAGCCGCAG 60.513 66.667 0.00 0.00 0.00 5.18
126 127 4.100084 CCATCCTCCACAGCCGCA 62.100 66.667 0.00 0.00 0.00 5.69
130 131 0.253044 TAAGCACCATCCTCCACAGC 59.747 55.000 0.00 0.00 0.00 4.40
131 132 1.134280 CCTAAGCACCATCCTCCACAG 60.134 57.143 0.00 0.00 0.00 3.66
132 133 0.911769 CCTAAGCACCATCCTCCACA 59.088 55.000 0.00 0.00 0.00 4.17
133 134 0.912486 ACCTAAGCACCATCCTCCAC 59.088 55.000 0.00 0.00 0.00 4.02
134 135 0.911769 CACCTAAGCACCATCCTCCA 59.088 55.000 0.00 0.00 0.00 3.86
139 140 1.450312 AGCGCACCTAAGCACCATC 60.450 57.895 11.47 0.00 35.48 3.51
141 142 2.358615 CAGCGCACCTAAGCACCA 60.359 61.111 11.47 0.00 35.48 4.17
142 143 3.804193 GCAGCGCACCTAAGCACC 61.804 66.667 11.47 0.00 35.48 5.01
143 144 4.152625 CGCAGCGCACCTAAGCAC 62.153 66.667 11.47 0.00 35.48 4.40
156 157 2.101575 GCATCCACACATGCGCAG 59.898 61.111 18.32 10.85 39.92 5.18
160 161 1.819208 TAGGCGCATCCACACATGC 60.819 57.895 10.83 0.00 45.01 4.06
162 163 1.153168 GGTAGGCGCATCCACACAT 60.153 57.895 10.83 0.00 37.29 3.21
163 164 2.267642 GGTAGGCGCATCCACACA 59.732 61.111 10.83 0.00 37.29 3.72
164 165 2.644555 ATCGGTAGGCGCATCCACAC 62.645 60.000 10.83 0.00 37.29 3.82
166 167 1.956170 CATCGGTAGGCGCATCCAC 60.956 63.158 10.83 0.00 37.29 4.02
167 168 2.421314 CATCGGTAGGCGCATCCA 59.579 61.111 10.83 0.00 37.29 3.41
168 169 2.172483 ATCCATCGGTAGGCGCATCC 62.172 60.000 10.83 7.23 0.00 3.51
170 171 1.293498 GATCCATCGGTAGGCGCAT 59.707 57.895 10.83 3.98 0.00 4.73
171 172 2.734591 GATCCATCGGTAGGCGCA 59.265 61.111 10.83 0.00 0.00 6.09
172 173 2.430921 CGATCCATCGGTAGGCGC 60.431 66.667 0.00 0.00 45.93 6.53
181 182 3.120408 CGCAAATCCATCTTCGATCCATC 60.120 47.826 0.00 0.00 0.00 3.51
182 183 2.810274 CGCAAATCCATCTTCGATCCAT 59.190 45.455 0.00 0.00 0.00 3.41
183 184 2.212652 CGCAAATCCATCTTCGATCCA 58.787 47.619 0.00 0.00 0.00 3.41
184 185 1.069636 GCGCAAATCCATCTTCGATCC 60.070 52.381 0.30 0.00 0.00 3.36
185 186 1.069636 GGCGCAAATCCATCTTCGATC 60.070 52.381 10.83 0.00 0.00 3.69
186 187 0.947244 GGCGCAAATCCATCTTCGAT 59.053 50.000 10.83 0.00 0.00 3.59
187 188 1.428370 CGGCGCAAATCCATCTTCGA 61.428 55.000 10.83 0.00 0.00 3.71
189 190 0.451783 AACGGCGCAAATCCATCTTC 59.548 50.000 10.83 0.00 0.00 2.87
190 191 0.887933 AAACGGCGCAAATCCATCTT 59.112 45.000 10.83 0.00 0.00 2.40
191 192 0.887933 AAAACGGCGCAAATCCATCT 59.112 45.000 10.83 0.00 0.00 2.90
192 193 0.991344 CAAAACGGCGCAAATCCATC 59.009 50.000 10.83 0.00 0.00 3.51
193 194 0.316841 ACAAAACGGCGCAAATCCAT 59.683 45.000 10.83 0.00 0.00 3.41
194 195 0.103208 AACAAAACGGCGCAAATCCA 59.897 45.000 10.83 0.00 0.00 3.41
195 196 1.213491 AAACAAAACGGCGCAAATCC 58.787 45.000 10.83 0.00 0.00 3.01
197 198 3.086818 ACTAAACAAAACGGCGCAAAT 57.913 38.095 10.83 0.00 0.00 2.32
198 199 2.563471 ACTAAACAAAACGGCGCAAA 57.437 40.000 10.83 0.00 0.00 3.68
200 201 1.268640 GGAACTAAACAAAACGGCGCA 60.269 47.619 10.83 0.00 0.00 6.09
215 216 6.020881 AGCAGAGTAGGAAGTATAGGAACT 57.979 41.667 0.00 0.00 46.37 3.01
220 221 9.563748 ACTTAAGTAGCAGAGTAGGAAGTATAG 57.436 37.037 6.26 0.00 0.00 1.31
221 222 9.917887 AACTTAAGTAGCAGAGTAGGAAGTATA 57.082 33.333 8.92 0.00 0.00 1.47
222 223 8.826293 AACTTAAGTAGCAGAGTAGGAAGTAT 57.174 34.615 8.92 0.00 0.00 2.12
223 224 9.393512 CTAACTTAAGTAGCAGAGTAGGAAGTA 57.606 37.037 8.92 0.00 0.00 2.24
224 225 8.108364 TCTAACTTAAGTAGCAGAGTAGGAAGT 58.892 37.037 8.92 0.00 0.00 3.01
225 226 8.508883 TCTAACTTAAGTAGCAGAGTAGGAAG 57.491 38.462 8.92 0.00 0.00 3.46
226 227 8.874744 TTCTAACTTAAGTAGCAGAGTAGGAA 57.125 34.615 8.92 0.30 0.00 3.36
231 232 9.220767 CCAAATTTCTAACTTAAGTAGCAGAGT 57.779 33.333 8.92 3.09 0.00 3.24
232 233 9.436957 TCCAAATTTCTAACTTAAGTAGCAGAG 57.563 33.333 8.92 2.26 0.00 3.35
236 237 8.459635 CCCTTCCAAATTTCTAACTTAAGTAGC 58.540 37.037 8.92 0.00 0.00 3.58
238 239 7.395206 GGCCCTTCCAAATTTCTAACTTAAGTA 59.605 37.037 8.92 0.00 34.01 2.24
239 240 6.210784 GGCCCTTCCAAATTTCTAACTTAAGT 59.789 38.462 1.12 1.12 34.01 2.24
240 241 6.437477 AGGCCCTTCCAAATTTCTAACTTAAG 59.563 38.462 0.00 0.00 37.29 1.85
241 242 6.210584 CAGGCCCTTCCAAATTTCTAACTTAA 59.789 38.462 0.00 0.00 37.29 1.85
242 243 5.714806 CAGGCCCTTCCAAATTTCTAACTTA 59.285 40.000 0.00 0.00 37.29 2.24
243 244 4.528206 CAGGCCCTTCCAAATTTCTAACTT 59.472 41.667 0.00 0.00 37.29 2.66
244 245 4.089361 CAGGCCCTTCCAAATTTCTAACT 58.911 43.478 0.00 0.00 37.29 2.24
246 247 4.086457 GACAGGCCCTTCCAAATTTCTAA 58.914 43.478 0.00 0.00 37.29 2.10
247 248 3.075283 TGACAGGCCCTTCCAAATTTCTA 59.925 43.478 0.00 0.00 37.29 2.10
248 249 2.158325 TGACAGGCCCTTCCAAATTTCT 60.158 45.455 0.00 0.00 37.29 2.52
250 251 2.397044 TGACAGGCCCTTCCAAATTT 57.603 45.000 0.00 0.00 37.29 1.82
252 253 2.582636 AGTATGACAGGCCCTTCCAAAT 59.417 45.455 0.00 0.00 37.29 2.32
253 254 1.992557 AGTATGACAGGCCCTTCCAAA 59.007 47.619 0.00 0.00 37.29 3.28
254 255 1.668826 AGTATGACAGGCCCTTCCAA 58.331 50.000 0.00 0.00 37.29 3.53
255 256 1.281867 CAAGTATGACAGGCCCTTCCA 59.718 52.381 0.00 0.00 37.29 3.53
257 258 1.408822 CCCAAGTATGACAGGCCCTTC 60.409 57.143 0.00 0.00 0.00 3.46
258 259 0.625849 CCCAAGTATGACAGGCCCTT 59.374 55.000 0.00 0.00 0.00 3.95
259 260 0.550147 ACCCAAGTATGACAGGCCCT 60.550 55.000 0.00 0.00 0.00 5.19
262 263 3.270877 CTTGTACCCAAGTATGACAGGC 58.729 50.000 0.00 0.00 42.61 4.85
273 274 6.938698 TGGTAAGATAAGACTTGTACCCAA 57.061 37.500 0.00 0.00 31.31 4.12
274 275 7.504926 AATGGTAAGATAAGACTTGTACCCA 57.495 36.000 0.00 0.00 31.31 4.51
275 276 8.674607 CAAAATGGTAAGATAAGACTTGTACCC 58.325 37.037 0.00 0.00 31.31 3.69
276 277 9.227777 ACAAAATGGTAAGATAAGACTTGTACC 57.772 33.333 0.00 5.34 32.34 3.34
279 280 9.131791 ACAACAAAATGGTAAGATAAGACTTGT 57.868 29.630 0.00 0.00 0.00 3.16
280 281 9.965824 AACAACAAAATGGTAAGATAAGACTTG 57.034 29.630 0.00 0.00 0.00 3.16
281 282 9.965824 CAACAACAAAATGGTAAGATAAGACTT 57.034 29.630 0.00 0.00 0.00 3.01
282 283 9.131791 ACAACAACAAAATGGTAAGATAAGACT 57.868 29.630 0.00 0.00 0.00 3.24
283 284 9.394477 GACAACAACAAAATGGTAAGATAAGAC 57.606 33.333 0.00 0.00 0.00 3.01
286 287 9.743057 CAAGACAACAACAAAATGGTAAGATAA 57.257 29.630 0.00 0.00 0.00 1.75
287 288 8.908903 ACAAGACAACAACAAAATGGTAAGATA 58.091 29.630 0.00 0.00 0.00 1.98
288 289 7.781056 ACAAGACAACAACAAAATGGTAAGAT 58.219 30.769 0.00 0.00 0.00 2.40
289 290 7.164230 ACAAGACAACAACAAAATGGTAAGA 57.836 32.000 0.00 0.00 0.00 2.10
290 291 7.543868 TGAACAAGACAACAACAAAATGGTAAG 59.456 33.333 0.00 0.00 0.00 2.34
291 292 7.378966 TGAACAAGACAACAACAAAATGGTAA 58.621 30.769 0.00 0.00 0.00 2.85
292 293 6.925211 TGAACAAGACAACAACAAAATGGTA 58.075 32.000 0.00 0.00 0.00 3.25
293 294 5.788450 TGAACAAGACAACAACAAAATGGT 58.212 33.333 0.00 0.00 0.00 3.55
295 296 6.949578 ACTGAACAAGACAACAACAAAATG 57.050 33.333 0.00 0.00 0.00 2.32
296 297 6.368516 CCAACTGAACAAGACAACAACAAAAT 59.631 34.615 0.00 0.00 0.00 1.82
297 298 5.694006 CCAACTGAACAAGACAACAACAAAA 59.306 36.000 0.00 0.00 0.00 2.44
298 299 5.226396 CCAACTGAACAAGACAACAACAAA 58.774 37.500 0.00 0.00 0.00 2.83
299 300 4.321601 CCCAACTGAACAAGACAACAACAA 60.322 41.667 0.00 0.00 0.00 2.83
302 303 2.757868 CCCCAACTGAACAAGACAACAA 59.242 45.455 0.00 0.00 0.00 2.83
306 307 2.818751 AACCCCAACTGAACAAGACA 57.181 45.000 0.00 0.00 0.00 3.41
307 308 4.457466 TCTAAACCCCAACTGAACAAGAC 58.543 43.478 0.00 0.00 0.00 3.01
308 309 4.781775 TCTAAACCCCAACTGAACAAGA 57.218 40.909 0.00 0.00 0.00 3.02
310 311 5.205056 ACATTCTAAACCCCAACTGAACAA 58.795 37.500 0.00 0.00 0.00 2.83
312 313 5.048713 CAGACATTCTAAACCCCAACTGAAC 60.049 44.000 0.00 0.00 0.00 3.18
313 314 5.070001 CAGACATTCTAAACCCCAACTGAA 58.930 41.667 0.00 0.00 0.00 3.02
314 315 4.104102 ACAGACATTCTAAACCCCAACTGA 59.896 41.667 0.00 0.00 0.00 3.41
317 318 4.455877 CAGACAGACATTCTAAACCCCAAC 59.544 45.833 0.00 0.00 0.00 3.77
318 319 4.104102 ACAGACAGACATTCTAAACCCCAA 59.896 41.667 0.00 0.00 0.00 4.12
319 320 3.650942 ACAGACAGACATTCTAAACCCCA 59.349 43.478 0.00 0.00 0.00 4.96
320 321 4.287766 ACAGACAGACATTCTAAACCCC 57.712 45.455 0.00 0.00 0.00 4.95
321 322 5.531287 ACAAACAGACAGACATTCTAAACCC 59.469 40.000 0.00 0.00 0.00 4.11
323 324 7.968405 ACAAACAAACAGACAGACATTCTAAAC 59.032 33.333 0.00 0.00 0.00 2.01
324 325 8.050778 ACAAACAAACAGACAGACATTCTAAA 57.949 30.769 0.00 0.00 0.00 1.85
326 327 7.042051 GCTACAAACAAACAGACAGACATTCTA 60.042 37.037 0.00 0.00 0.00 2.10
327 328 6.238484 GCTACAAACAAACAGACAGACATTCT 60.238 38.462 0.00 0.00 0.00 2.40
328 329 5.909610 GCTACAAACAAACAGACAGACATTC 59.090 40.000 0.00 0.00 0.00 2.67
330 331 4.881273 TGCTACAAACAAACAGACAGACAT 59.119 37.500 0.00 0.00 0.00 3.06
331 332 4.257731 TGCTACAAACAAACAGACAGACA 58.742 39.130 0.00 0.00 0.00 3.41
332 333 4.786609 GCTGCTACAAACAAACAGACAGAC 60.787 45.833 0.00 0.00 0.00 3.51
333 334 3.312421 GCTGCTACAAACAAACAGACAGA 59.688 43.478 0.00 0.00 0.00 3.41
337 338 2.033299 GCTGCTGCTACAAACAAACAGA 59.967 45.455 8.53 0.00 36.03 3.41
338 339 2.388121 GCTGCTGCTACAAACAAACAG 58.612 47.619 8.53 0.00 36.03 3.16
339 340 2.490328 GCTGCTGCTACAAACAAACA 57.510 45.000 8.53 0.00 36.03 2.83
352 353 3.188048 CAGTCTAAACTCCAAAGCTGCTG 59.812 47.826 1.35 0.00 31.71 4.41
353 354 3.181450 ACAGTCTAAACTCCAAAGCTGCT 60.181 43.478 0.00 0.00 31.71 4.24
354 355 3.142174 ACAGTCTAAACTCCAAAGCTGC 58.858 45.455 0.00 0.00 31.71 5.25
355 356 4.450419 CAGACAGTCTAAACTCCAAAGCTG 59.550 45.833 1.67 0.00 31.71 4.24
356 357 4.101741 ACAGACAGTCTAAACTCCAAAGCT 59.898 41.667 1.67 0.00 31.71 3.74
357 358 4.381411 ACAGACAGTCTAAACTCCAAAGC 58.619 43.478 1.67 0.00 31.71 3.51
358 359 7.378966 TCATACAGACAGTCTAAACTCCAAAG 58.621 38.462 1.67 0.00 31.71 2.77
361 362 6.569801 CGTTCATACAGACAGTCTAAACTCCA 60.570 42.308 1.67 0.00 31.71 3.86
362 363 5.800941 CGTTCATACAGACAGTCTAAACTCC 59.199 44.000 1.67 0.00 31.71 3.85
364 365 6.150318 CACGTTCATACAGACAGTCTAAACT 58.850 40.000 1.67 0.00 35.60 2.66
367 368 4.763279 TCCACGTTCATACAGACAGTCTAA 59.237 41.667 1.67 0.00 0.00 2.10
369 370 3.057456 GTCCACGTTCATACAGACAGTCT 60.057 47.826 0.00 0.00 0.00 3.24
370 371 3.243336 GTCCACGTTCATACAGACAGTC 58.757 50.000 0.00 0.00 0.00 3.51
371 372 2.351447 CGTCCACGTTCATACAGACAGT 60.351 50.000 0.00 0.00 34.11 3.55
372 373 2.251040 CGTCCACGTTCATACAGACAG 58.749 52.381 0.00 0.00 34.11 3.51
373 374 1.068125 CCGTCCACGTTCATACAGACA 60.068 52.381 0.00 0.00 37.74 3.41
374 375 1.625616 CCGTCCACGTTCATACAGAC 58.374 55.000 0.00 0.00 37.74 3.51
376 377 0.528924 TCCCGTCCACGTTCATACAG 59.471 55.000 0.00 0.00 37.74 2.74
377 378 1.187974 ATCCCGTCCACGTTCATACA 58.812 50.000 0.00 0.00 37.74 2.29
378 379 2.304751 AATCCCGTCCACGTTCATAC 57.695 50.000 0.00 0.00 37.74 2.39
379 380 2.234168 TCAAATCCCGTCCACGTTCATA 59.766 45.455 0.00 0.00 37.74 2.15
380 381 1.002659 TCAAATCCCGTCCACGTTCAT 59.997 47.619 0.00 0.00 37.74 2.57
382 383 1.515081 TTCAAATCCCGTCCACGTTC 58.485 50.000 0.00 0.00 37.74 3.95
384 385 2.194201 AATTCAAATCCCGTCCACGT 57.806 45.000 0.00 0.00 37.74 4.49
385 386 2.862512 CAAATTCAAATCCCGTCCACG 58.137 47.619 0.00 0.00 39.44 4.94
386 387 2.231235 AGCAAATTCAAATCCCGTCCAC 59.769 45.455 0.00 0.00 0.00 4.02
387 388 2.524306 AGCAAATTCAAATCCCGTCCA 58.476 42.857 0.00 0.00 0.00 4.02
389 390 5.572896 CAGTTAAGCAAATTCAAATCCCGTC 59.427 40.000 0.00 0.00 0.00 4.79
390 391 5.242838 TCAGTTAAGCAAATTCAAATCCCGT 59.757 36.000 0.00 0.00 0.00 5.28
391 392 5.708948 TCAGTTAAGCAAATTCAAATCCCG 58.291 37.500 0.00 0.00 0.00 5.14
406 407 5.757850 ACACTTTCAAGGCTTCAGTTAAG 57.242 39.130 0.00 0.00 38.32 1.85
407 408 6.354130 AGTACACTTTCAAGGCTTCAGTTAA 58.646 36.000 0.00 0.00 0.00 2.01
408 409 5.925509 AGTACACTTTCAAGGCTTCAGTTA 58.074 37.500 0.00 0.00 0.00 2.24
409 410 4.781934 AGTACACTTTCAAGGCTTCAGTT 58.218 39.130 0.00 0.00 0.00 3.16
410 411 4.423625 AGTACACTTTCAAGGCTTCAGT 57.576 40.909 0.00 0.00 0.00 3.41
411 412 6.428159 ACATAAGTACACTTTCAAGGCTTCAG 59.572 38.462 0.00 0.00 37.40 3.02
412 413 6.204688 CACATAAGTACACTTTCAAGGCTTCA 59.795 38.462 0.00 0.00 37.40 3.02
413 414 6.426937 TCACATAAGTACACTTTCAAGGCTTC 59.573 38.462 0.00 0.00 37.40 3.86
414 415 6.204882 GTCACATAAGTACACTTTCAAGGCTT 59.795 38.462 0.00 0.00 37.40 4.35
415 416 5.701290 GTCACATAAGTACACTTTCAAGGCT 59.299 40.000 0.00 0.00 37.40 4.58
417 418 6.147821 CCAGTCACATAAGTACACTTTCAAGG 59.852 42.308 0.00 0.00 37.40 3.61
418 419 6.147821 CCCAGTCACATAAGTACACTTTCAAG 59.852 42.308 0.00 0.00 37.40 3.02
419 420 5.995282 CCCAGTCACATAAGTACACTTTCAA 59.005 40.000 0.00 0.00 37.40 2.69
420 421 5.305902 TCCCAGTCACATAAGTACACTTTCA 59.694 40.000 0.00 0.00 37.40 2.69
421 422 5.790593 TCCCAGTCACATAAGTACACTTTC 58.209 41.667 0.00 0.00 37.40 2.62
422 423 5.542635 TCTCCCAGTCACATAAGTACACTTT 59.457 40.000 0.00 0.00 37.40 2.66
423 424 5.047235 GTCTCCCAGTCACATAAGTACACTT 60.047 44.000 0.00 0.00 39.85 3.16
424 425 4.463186 GTCTCCCAGTCACATAAGTACACT 59.537 45.833 0.00 0.00 0.00 3.55
425 426 4.463186 AGTCTCCCAGTCACATAAGTACAC 59.537 45.833 0.00 0.00 0.00 2.90
426 427 4.673968 AGTCTCCCAGTCACATAAGTACA 58.326 43.478 0.00 0.00 0.00 2.90
427 428 4.951094 AGAGTCTCCCAGTCACATAAGTAC 59.049 45.833 0.00 0.00 0.00 2.73
428 429 5.194473 AGAGTCTCCCAGTCACATAAGTA 57.806 43.478 0.00 0.00 0.00 2.24
429 430 4.054359 AGAGTCTCCCAGTCACATAAGT 57.946 45.455 0.00 0.00 0.00 2.24
430 431 6.723298 AATAGAGTCTCCCAGTCACATAAG 57.277 41.667 0.00 0.00 0.00 1.73
431 432 6.183360 CGAAATAGAGTCTCCCAGTCACATAA 60.183 42.308 0.00 0.00 0.00 1.90
432 433 5.299531 CGAAATAGAGTCTCCCAGTCACATA 59.700 44.000 0.00 0.00 0.00 2.29
433 434 4.098654 CGAAATAGAGTCTCCCAGTCACAT 59.901 45.833 0.00 0.00 0.00 3.21
437 438 3.695060 TCACGAAATAGAGTCTCCCAGTC 59.305 47.826 0.00 0.00 0.00 3.51
438 439 3.697045 CTCACGAAATAGAGTCTCCCAGT 59.303 47.826 0.00 0.00 0.00 4.00
439 440 3.490078 GCTCACGAAATAGAGTCTCCCAG 60.490 52.174 0.00 0.00 34.39 4.45
441 442 2.427453 TGCTCACGAAATAGAGTCTCCC 59.573 50.000 0.00 0.00 34.39 4.30
443 444 3.378742 TCCTGCTCACGAAATAGAGTCTC 59.621 47.826 0.00 0.00 34.39 3.36
444 445 3.357203 TCCTGCTCACGAAATAGAGTCT 58.643 45.455 0.00 0.00 34.39 3.24
445 446 3.784701 TCCTGCTCACGAAATAGAGTC 57.215 47.619 0.00 0.00 34.39 3.36
446 447 4.744795 AATCCTGCTCACGAAATAGAGT 57.255 40.909 0.00 0.00 34.39 3.24
447 448 4.509600 GGAAATCCTGCTCACGAAATAGAG 59.490 45.833 0.00 0.00 35.01 2.43
449 450 3.561725 GGGAAATCCTGCTCACGAAATAG 59.438 47.826 0.00 0.00 35.95 1.73
451 452 2.290896 TGGGAAATCCTGCTCACGAAAT 60.291 45.455 0.00 0.00 36.20 2.17
452 453 1.073125 TGGGAAATCCTGCTCACGAAA 59.927 47.619 0.00 0.00 36.20 3.46
453 454 0.690192 TGGGAAATCCTGCTCACGAA 59.310 50.000 0.00 0.00 36.20 3.85
454 455 0.911769 ATGGGAAATCCTGCTCACGA 59.088 50.000 0.00 0.00 36.20 4.35
455 456 1.672881 GAATGGGAAATCCTGCTCACG 59.327 52.381 0.00 0.00 36.20 4.35
456 457 3.010200 AGAATGGGAAATCCTGCTCAC 57.990 47.619 0.00 0.00 36.20 3.51
457 458 3.010472 TCAAGAATGGGAAATCCTGCTCA 59.990 43.478 0.00 0.00 36.20 4.26
458 459 3.379688 GTCAAGAATGGGAAATCCTGCTC 59.620 47.826 0.00 0.00 36.20 4.26
459 460 3.359950 GTCAAGAATGGGAAATCCTGCT 58.640 45.455 0.00 0.00 36.20 4.24
460 461 2.098117 CGTCAAGAATGGGAAATCCTGC 59.902 50.000 0.00 0.00 36.20 4.85
462 463 2.369394 GCGTCAAGAATGGGAAATCCT 58.631 47.619 0.00 0.00 36.20 3.24
463 464 1.064060 CGCGTCAAGAATGGGAAATCC 59.936 52.381 0.00 0.00 0.00 3.01
464 465 1.737793 ACGCGTCAAGAATGGGAAATC 59.262 47.619 5.58 0.00 0.00 2.17
465 466 1.821216 ACGCGTCAAGAATGGGAAAT 58.179 45.000 5.58 0.00 0.00 2.17
490 4224 2.295909 GGACAACTGGCTGCAAATTACA 59.704 45.455 0.50 0.00 0.00 2.41
556 4292 2.522638 GCCTACGTGCACATACCGC 61.523 63.158 18.64 7.39 0.00 5.68
567 4303 2.166664 GAGAGAGGTTGATTGCCTACGT 59.833 50.000 0.00 0.00 36.29 3.57
582 4318 4.511527 TGCAATTAGGCAGAAAGAGAGAG 58.488 43.478 0.00 0.00 39.25 3.20
583 4319 4.558226 TGCAATTAGGCAGAAAGAGAGA 57.442 40.909 0.00 0.00 39.25 3.10
588 4324 4.998500 TGCCCATGCAATTAGGCAGAAAG 61.998 47.826 15.80 0.00 45.54 2.62
589 4325 3.151795 TGCCCATGCAATTAGGCAGAAA 61.152 45.455 15.80 0.00 45.54 2.52
590 4326 1.619160 TGCCCATGCAATTAGGCAGAA 60.619 47.619 15.80 0.00 45.54 3.02
591 4327 0.033306 TGCCCATGCAATTAGGCAGA 60.033 50.000 15.80 0.00 45.54 4.26
592 4328 2.507213 TGCCCATGCAATTAGGCAG 58.493 52.632 15.80 0.00 45.54 4.85
697 4589 4.223923 TGGTTGGGCTTCAAGAAAGAAAAA 59.776 37.500 0.00 0.00 37.12 1.94
699 4591 3.132111 GTGGTTGGGCTTCAAGAAAGAAA 59.868 43.478 0.00 0.00 37.12 2.52
700 4592 2.693074 GTGGTTGGGCTTCAAGAAAGAA 59.307 45.455 0.00 0.00 37.12 2.52
702 4594 1.341209 GGTGGTTGGGCTTCAAGAAAG 59.659 52.381 0.00 0.00 35.80 2.62
719 4611 2.672961 TCGAGCTAGTCCAAATGGTG 57.327 50.000 0.00 0.00 36.34 4.17
732 4624 4.307432 TCTTTTCGTTTCTGAATCGAGCT 58.693 39.130 19.18 0.00 35.13 4.09
733 4625 4.434857 CCTCTTTTCGTTTCTGAATCGAGC 60.435 45.833 19.18 0.00 35.13 5.03
778 4671 2.223572 CGCAGCTTTTCCAGTTTTCAGT 60.224 45.455 0.00 0.00 0.00 3.41
825 4718 0.107945 AAGTCGGGAAGATGCTCTGC 60.108 55.000 0.00 0.00 0.00 4.26
872 4765 3.642741 AAGCGGAGGGGAGGATGGT 62.643 63.158 0.00 0.00 0.00 3.55
954 4847 5.560724 TCTCCTAACCCAAGACAAAAGATG 58.439 41.667 0.00 0.00 0.00 2.90
977 4870 1.073199 CTTGGTCTCGCCCAGGTTT 59.927 57.895 0.00 0.00 35.49 3.27
982 4875 0.324738 ATCTCTCTTGGTCTCGCCCA 60.325 55.000 0.00 0.00 36.04 5.36
1010 4903 2.902705 TCAAACGGTACAGTGAAGCT 57.097 45.000 0.00 0.00 0.00 3.74
1017 4910 5.445407 CCAATACACGAATCAAACGGTACAG 60.445 44.000 0.00 0.00 34.93 2.74
1033 4926 7.617041 ACTAGCAAGAGAAAATCCAATACAC 57.383 36.000 0.00 0.00 0.00 2.90
1037 4930 7.373493 CACAAACTAGCAAGAGAAAATCCAAT 58.627 34.615 0.00 0.00 0.00 3.16
1042 4935 6.183360 ACAAGCACAAACTAGCAAGAGAAAAT 60.183 34.615 0.00 0.00 0.00 1.82
1076 4969 2.488153 CAAGAAATTTCACCCCGGAGAC 59.512 50.000 19.99 0.00 0.00 3.36
1080 4973 2.514803 AGACAAGAAATTTCACCCCGG 58.485 47.619 19.99 0.00 0.00 5.73
1096 4989 5.930837 ACAAATCCCAAGAAACAAAGACA 57.069 34.783 0.00 0.00 0.00 3.41
1177 5070 8.865420 AATAGCAGAGCAAGATCATAATTCAT 57.135 30.769 0.00 0.00 0.00 2.57
1178 5071 8.687292 AAATAGCAGAGCAAGATCATAATTCA 57.313 30.769 0.00 0.00 0.00 2.57
1179 5072 8.235905 GGAAATAGCAGAGCAAGATCATAATTC 58.764 37.037 0.00 0.00 0.00 2.17
1180 5073 7.943447 AGGAAATAGCAGAGCAAGATCATAATT 59.057 33.333 0.00 0.00 0.00 1.40
1181 5074 7.460071 AGGAAATAGCAGAGCAAGATCATAAT 58.540 34.615 0.00 0.00 0.00 1.28
1309 5856 4.095400 GCTCCCCCTCCTCCTCCA 62.095 72.222 0.00 0.00 0.00 3.86
1316 5863 2.750657 CCTGACATGCTCCCCCTCC 61.751 68.421 0.00 0.00 0.00 4.30
1341 5900 1.301009 GGATCGGATTGGGCGTCTC 60.301 63.158 0.00 0.00 0.00 3.36
1343 5902 1.153249 TTGGATCGGATTGGGCGTC 60.153 57.895 0.00 0.00 0.00 5.19
1355 5914 2.803492 GCAGGACACGATAGGTTGGATC 60.803 54.545 0.00 0.00 43.77 3.36
1365 5925 0.603569 AAGAACGAGCAGGACACGAT 59.396 50.000 0.00 0.00 36.14 3.73
1370 5930 1.618640 GACGCAAGAACGAGCAGGAC 61.619 60.000 0.00 0.00 43.62 3.85
1412 5986 7.379529 CACAGAAACAAAGGAAATCACATACAC 59.620 37.037 0.00 0.00 0.00 2.90
1459 6039 4.127040 AGCAGGCAGAGCGTCTCG 62.127 66.667 0.00 0.00 35.36 4.04
1483 6063 2.159128 CCAGATCGTCATGAGAAGCAGT 60.159 50.000 0.00 0.00 0.00 4.40
1683 6307 4.033776 ACACGGTGAGGGCCATGG 62.034 66.667 16.29 7.63 0.00 3.66
1739 6411 2.202690 CGCATACCCGTCGCTCAA 60.203 61.111 0.00 0.00 0.00 3.02
1764 6454 4.161295 CGGCGAAGATCAGGCCCA 62.161 66.667 0.00 0.00 43.99 5.36
1862 6556 1.275291 TGCCCAAACTCTACGAGAAGG 59.725 52.381 0.00 0.00 33.32 3.46
1920 6638 2.721231 GCGCTGCCAAAACAGACA 59.279 55.556 0.00 0.00 40.25 3.41
1962 6699 4.082665 TCCAAGATGCTCAATCATCCTC 57.917 45.455 0.63 0.00 42.84 3.71
1963 6700 4.205587 GTTCCAAGATGCTCAATCATCCT 58.794 43.478 0.63 0.00 42.84 3.24
1967 6723 3.009363 TCAGGTTCCAAGATGCTCAATCA 59.991 43.478 0.00 0.00 37.81 2.57
1996 6752 2.269241 GGCCCTTCTTCAGGTCGG 59.731 66.667 0.00 0.00 42.02 4.79
2021 6777 4.515191 GCACATCCAACACTAGACAGAAAA 59.485 41.667 0.00 0.00 0.00 2.29
2023 6779 3.324846 AGCACATCCAACACTAGACAGAA 59.675 43.478 0.00 0.00 0.00 3.02
2025 6781 3.325293 AGCACATCCAACACTAGACAG 57.675 47.619 0.00 0.00 0.00 3.51
2026 6782 4.466015 TCATAGCACATCCAACACTAGACA 59.534 41.667 0.00 0.00 0.00 3.41
2027 6783 5.011090 TCATAGCACATCCAACACTAGAC 57.989 43.478 0.00 0.00 0.00 2.59
2028 6784 4.711846 ACTCATAGCACATCCAACACTAGA 59.288 41.667 0.00 0.00 0.00 2.43
2067 6858 8.046867 TCCTTCCTGAGTTCAGATAGTAGATA 57.953 38.462 10.64 0.00 46.59 1.98
2106 6897 2.241176 TGACACATTAATCCTGTCCCCC 59.759 50.000 15.60 0.00 34.55 5.40
2126 6917 5.907391 GTTTTTCACGAAACATCAGGTACTG 59.093 40.000 0.00 0.00 46.49 2.74
2141 6932 7.704899 ACATTCCCTAAAGAAAAGTTTTTCACG 59.295 33.333 16.98 4.87 46.81 4.35
2150 6942 9.415544 CTTCATGAAACATTCCCTAAAGAAAAG 57.584 33.333 9.88 0.00 0.00 2.27
2151 6943 9.142014 TCTTCATGAAACATTCCCTAAAGAAAA 57.858 29.630 9.88 0.00 0.00 2.29
2153 6945 8.576442 GTTCTTCATGAAACATTCCCTAAAGAA 58.424 33.333 9.88 1.80 36.30 2.52
2154 6946 7.944554 AGTTCTTCATGAAACATTCCCTAAAGA 59.055 33.333 9.88 0.00 36.30 2.52
2155 6947 8.115490 AGTTCTTCATGAAACATTCCCTAAAG 57.885 34.615 9.88 0.00 36.30 1.85
2179 6971 7.506938 AGGAAATTATCACATCCCCATAACAAG 59.493 37.037 0.00 0.00 32.15 3.16
2203 6995 1.033574 TGTAACCCCAAAACGCAAGG 58.966 50.000 0.00 0.00 46.39 3.61
2227 7019 3.109044 CAGTGATCCAGTGCCTATCTG 57.891 52.381 0.00 0.00 0.00 2.90
2269 7061 2.093500 TCCTCATCGACATGAACCAAGG 60.093 50.000 0.00 0.00 38.63 3.61
2282 7074 4.305769 GGAAGAAGATCACATCCTCATCG 58.694 47.826 0.00 0.00 0.00 3.84
2287 7079 3.429547 CGAACGGAAGAAGATCACATCCT 60.430 47.826 10.72 0.00 0.00 3.24
2302 7094 2.880268 TCACAGAGAGTTAACGAACGGA 59.120 45.455 0.00 0.00 40.76 4.69
2303 7095 3.278367 TCACAGAGAGTTAACGAACGG 57.722 47.619 0.00 0.00 40.76 4.44
2304 7096 3.852536 GGATCACAGAGAGTTAACGAACG 59.147 47.826 0.00 0.00 40.76 3.95
2427 7219 5.277345 GCTTACATAAGTCAATAACGCCCAG 60.277 44.000 0.83 0.00 35.75 4.45
2566 7358 2.355818 GCTCCGACCTTCCATTTAACCT 60.356 50.000 0.00 0.00 0.00 3.50
2747 7539 2.351336 GACCCTCCGTGCATAGGTCG 62.351 65.000 10.42 0.00 37.83 4.79
2856 7648 2.945456 TGATGCGGTGTAGACTCCTAT 58.055 47.619 0.00 0.00 0.00 2.57
2857 7649 2.430248 TGATGCGGTGTAGACTCCTA 57.570 50.000 0.00 0.00 0.00 2.94
2900 7692 4.993029 AGAGTGAAATCTAACTCCTCCG 57.007 45.455 0.00 0.00 43.18 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.