Multiple sequence alignment - TraesCS2B01G209700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G209700 chr2B 100.000 3562 0 0 1 3562 191876848 191880409 0.000000e+00 6578.0
1 TraesCS2B01G209700 chr2B 89.714 350 34 2 1 348 599920352 599920003 2.520000e-121 446.0
2 TraesCS2B01G209700 chr2D 93.216 2624 94 22 563 3139 134929865 134932451 0.000000e+00 3783.0
3 TraesCS2B01G209700 chr2D 96.760 463 14 1 1 463 134915919 134916380 0.000000e+00 771.0
4 TraesCS2B01G209700 chr2D 93.827 81 5 0 460 540 134929168 134929248 4.830000e-24 122.0
5 TraesCS2B01G209700 chr2A 93.461 2294 83 21 892 3130 143027263 143029544 0.000000e+00 3343.0
6 TraesCS2B01G209700 chr2A 90.607 511 42 3 1 511 143024169 143024673 0.000000e+00 673.0
7 TraesCS2B01G209700 chr2A 85.172 290 18 10 609 894 143026967 143027235 1.260000e-69 274.0
8 TraesCS2B01G209700 chr2A 100.000 31 0 0 564 594 143025314 143025344 1.380000e-04 58.4
9 TraesCS2B01G209700 chr5B 98.832 428 5 0 3135 3562 507611074 507611501 0.000000e+00 763.0
10 TraesCS2B01G209700 chr7B 98.364 428 7 0 3135 3562 654993763 654994190 0.000000e+00 752.0
11 TraesCS2B01G209700 chr7B 97.897 428 9 0 3135 3562 54920703 54921130 0.000000e+00 741.0
12 TraesCS2B01G209700 chr7B 96.729 428 14 0 3135 3562 34138749 34139176 0.000000e+00 713.0
13 TraesCS2B01G209700 chr3B 98.131 428 8 0 3135 3562 659530947 659531374 0.000000e+00 747.0
14 TraesCS2B01G209700 chr6B 97.664 428 10 0 3135 3562 102181684 102181257 0.000000e+00 736.0
15 TraesCS2B01G209700 chr1B 97.664 428 10 0 3135 3562 223134782 223134355 0.000000e+00 736.0
16 TraesCS2B01G209700 chr1B 90.341 352 29 4 1 348 411666163 411665813 1.170000e-124 457.0
17 TraesCS2B01G209700 chr4B 97.430 428 11 0 3135 3562 661489805 661489378 0.000000e+00 730.0
18 TraesCS2B01G209700 chr4A 96.495 428 15 0 3135 3562 726855305 726855732 0.000000e+00 708.0
19 TraesCS2B01G209700 chr4A 90.000 350 32 3 1 348 491827487 491827139 1.950000e-122 449.0
20 TraesCS2B01G209700 chr5D 90.000 350 32 3 1 348 4295070 4294722 1.950000e-122 449.0
21 TraesCS2B01G209700 chr5D 89.607 356 32 5 1 353 300749380 300749733 7.010000e-122 448.0
22 TraesCS2B01G209700 chr5D 89.773 352 31 5 1 349 347375631 347375980 2.520000e-121 446.0
23 TraesCS2B01G209700 chr1D 89.744 351 34 2 1 349 357502048 357501698 7.010000e-122 448.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G209700 chr2B 191876848 191880409 3561 False 6578.0 6578 100.0000 1 3562 1 chr2B.!!$F1 3561
1 TraesCS2B01G209700 chr2D 134929168 134932451 3283 False 1952.5 3783 93.5215 460 3139 2 chr2D.!!$F2 2679
2 TraesCS2B01G209700 chr2A 143024169 143029544 5375 False 1087.1 3343 92.3100 1 3130 4 chr2A.!!$F1 3129

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
381 382 0.038166 TCTCCACCCAGCCAAATGTC 59.962 55.0 0.00 0.0 0.00 3.06 F
532 586 0.509929 GGTAGTCACGTTTGCGGAAC 59.490 55.0 0.00 0.0 43.45 3.62 F
1831 4147 0.613012 AATTCTCAAGGGGCCTGCAC 60.613 55.0 0.84 0.0 0.00 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1222 3531 0.381445 TTGTCGTCGACGGAGAACAA 59.619 50.0 35.05 31.20 40.29 2.83 R
2426 4758 1.313772 TCTCTACGGATGAGCTGCTC 58.686 55.0 22.38 22.38 0.00 4.26 R
3144 5512 0.032130 TCAGTTGGTCGCAGAGTGAC 59.968 55.0 2.25 2.25 41.69 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 1.279271 GTGCCTCCACACCACTCTAAT 59.721 52.381 0.00 0.00 41.67 1.73
77 78 1.202615 TCGGGATACATCGTCGTCTCT 60.203 52.381 0.00 0.00 39.74 3.10
80 81 1.333931 GGATACATCGTCGTCTCTGCA 59.666 52.381 0.00 0.00 0.00 4.41
87 88 1.875813 GTCGTCTCTGCATGCCTCG 60.876 63.158 16.68 12.24 0.00 4.63
113 114 4.122337 TCTCTTACCCGAGCCCATTATA 57.878 45.455 0.00 0.00 0.00 0.98
119 120 1.271325 CCCGAGCCCATTATATGTGCA 60.271 52.381 0.00 0.00 36.03 4.57
131 132 7.066887 CCCATTATATGTGCACTTACTTTGTGA 59.933 37.037 19.41 0.00 37.60 3.58
146 147 6.487689 ACTTTGTGATAGCTTTAGTGCTTC 57.512 37.500 0.00 0.00 43.74 3.86
243 244 9.391006 CCTAGTATATTTAGGTTTTGTGCTTGA 57.609 33.333 5.51 0.00 34.27 3.02
245 246 8.630054 AGTATATTTAGGTTTTGTGCTTGACA 57.370 30.769 0.00 0.00 0.00 3.58
246 247 9.073475 AGTATATTTAGGTTTTGTGCTTGACAA 57.927 29.630 0.00 0.00 43.11 3.18
307 308 8.974408 CCTAAACCATAATTATTTTAAAGCGCC 58.026 33.333 2.29 0.00 0.00 6.53
343 344 0.999406 CTAGGCAACATCCACGTTCG 59.001 55.000 0.00 0.00 41.41 3.95
350 351 1.497991 ACATCCACGTTCGTTCACTG 58.502 50.000 0.00 0.00 0.00 3.66
375 376 3.080641 CACATCTCCACCCAGCCA 58.919 61.111 0.00 0.00 0.00 4.75
381 382 0.038166 TCTCCACCCAGCCAAATGTC 59.962 55.000 0.00 0.00 0.00 3.06
391 392 2.866156 CAGCCAAATGTCGATCACGTAT 59.134 45.455 0.00 0.00 40.69 3.06
392 393 2.866156 AGCCAAATGTCGATCACGTATG 59.134 45.455 0.00 0.00 40.69 2.39
402 403 2.097629 CGATCACGTATGTGTGGACTCT 59.902 50.000 14.63 0.00 46.49 3.24
418 419 3.400255 GACTCTTTAAAGGAGTTGCGGT 58.600 45.455 15.13 2.57 43.13 5.68
424 425 1.021968 AAAGGAGTTGCGGTTGTGAC 58.978 50.000 0.00 0.00 0.00 3.67
433 434 1.569493 CGGTTGTGACGCTTGGAAG 59.431 57.895 0.00 0.00 0.00 3.46
436 437 1.880027 GGTTGTGACGCTTGGAAGAAT 59.120 47.619 0.00 0.00 0.00 2.40
449 450 6.128063 CGCTTGGAAGAATCTTTCAAGAGATT 60.128 38.462 35.78 0.08 46.28 2.40
489 543 0.523072 CACCAACTCTCATTTGCGGG 59.477 55.000 0.00 0.00 0.00 6.13
491 545 1.004745 ACCAACTCTCATTTGCGGGAT 59.995 47.619 0.00 0.00 0.00 3.85
497 551 3.144506 CTCTCATTTGCGGGATATGCTT 58.855 45.455 0.00 0.00 0.00 3.91
532 586 0.509929 GGTAGTCACGTTTGCGGAAC 59.490 55.000 0.00 0.00 43.45 3.62
554 608 6.328641 ACGAGAGTTTGCGGTATATATCTT 57.671 37.500 0.00 0.00 46.40 2.40
557 611 8.355169 ACGAGAGTTTGCGGTATATATCTTTAA 58.645 33.333 0.00 0.00 46.40 1.52
938 3241 1.061657 TCTCCGGGTCCCATTATCCTT 60.062 52.381 9.12 0.00 0.00 3.36
952 3255 1.899437 ATCCTTTCTCCTGCCGCGAA 61.899 55.000 8.23 0.00 0.00 4.70
1082 3391 2.316586 ACCCATTCCCCGCTTCCAT 61.317 57.895 0.00 0.00 0.00 3.41
1161 3470 4.379243 CCGTCCACTTCCGCTGCT 62.379 66.667 0.00 0.00 0.00 4.24
1620 3930 3.679083 GCTATTCCTGTACAAGTTCGCCT 60.679 47.826 0.00 0.00 0.00 5.52
1714 4030 7.378728 GTGCTTGTTTCTTCCTGTATTTTGTAC 59.621 37.037 0.00 0.00 0.00 2.90
1782 4098 3.920412 GGCAGTTGTTTTACAATAGCAGC 59.080 43.478 15.80 0.00 40.59 5.25
1831 4147 0.613012 AATTCTCAAGGGGCCTGCAC 60.613 55.000 0.84 0.00 0.00 4.57
1832 4148 2.505364 ATTCTCAAGGGGCCTGCACC 62.505 60.000 1.00 1.00 40.57 5.01
1848 4164 5.775195 GCCTGCACCCCTTAATAAAGATTAT 59.225 40.000 0.00 0.00 34.37 1.28
1945 4268 2.028936 CATCAACCCACGCACAACA 58.971 52.632 0.00 0.00 0.00 3.33
2049 4372 2.758423 GGATAACATCCTGCGGGTTTTT 59.242 45.455 12.43 5.32 46.19 1.94
2090 4413 6.928492 GTGCTGGAAAATGAATTACAGGAAAA 59.072 34.615 1.78 0.00 31.57 2.29
2097 4420 9.705290 GAAAATGAATTACAGGAAAAGGCTAAA 57.295 29.630 0.00 0.00 0.00 1.85
2110 4433 8.046708 AGGAAAAGGCTAAATTTTCACAAAGTT 58.953 29.630 10.59 0.00 44.69 2.66
2116 4439 9.830975 AGGCTAAATTTTCACAAAGTTAAATGT 57.169 25.926 0.00 0.00 33.28 2.71
2150 4473 8.094548 ACCATATGAATTATAACTAGCTCGCAA 58.905 33.333 3.65 0.00 0.00 4.85
2208 4536 2.002586 CAGGTTCGCCAGATAACAGTG 58.997 52.381 0.00 0.00 40.60 3.66
2260 4591 7.686438 TTTTCTGCTTATTCTCTGTATTGCA 57.314 32.000 0.00 0.00 0.00 4.08
2275 4606 7.112122 TCTGTATTGCATTGTTATCCTTCAGT 58.888 34.615 0.00 0.00 0.00 3.41
2280 4611 6.048732 TGCATTGTTATCCTTCAGTGAGTA 57.951 37.500 0.00 0.00 0.00 2.59
2337 4669 6.129179 ACAATTATAAATGGGCTGTGCTACT 58.871 36.000 5.54 0.00 0.00 2.57
2369 4701 1.268625 GTGTTTGGAATCAACGGGGTC 59.731 52.381 0.00 0.00 31.78 4.46
2534 4866 1.622312 AGTGACTTGCAGCAGATCTCA 59.378 47.619 0.00 0.00 0.00 3.27
2651 4983 5.876612 GCCATTATTCTCATCTTAGGCTG 57.123 43.478 0.00 0.00 36.72 4.85
2709 5056 6.653740 GGCTAGTAGTAAAATGTGGTGAAACT 59.346 38.462 0.00 0.00 36.74 2.66
2714 5061 8.962679 AGTAGTAAAATGTGGTGAAACTTTTCA 58.037 29.630 0.07 0.07 44.31 2.69
2774 5121 0.035056 CCATCGGCCCAAAAGTCTCT 60.035 55.000 0.00 0.00 0.00 3.10
2794 5141 6.868864 GTCTCTGCAGAAACTATTGTTCTACA 59.131 38.462 18.85 0.00 34.96 2.74
2801 5148 8.012241 GCAGAAACTATTGTTCTACAGTTTGAG 58.988 37.037 3.48 0.00 40.38 3.02
2845 5192 7.013750 CCTCACTGCTAGTGTCATCTTAGATAA 59.986 40.741 13.59 0.00 46.03 1.75
3052 5420 0.752658 AGGGCAAGTGCTTTTTGGTC 59.247 50.000 2.85 0.00 41.70 4.02
3057 5425 1.788308 CAAGTGCTTTTTGGTCGCATG 59.212 47.619 0.00 0.00 35.93 4.06
3113 5481 2.716217 ACTGCAGTGGAAATAAGCTCC 58.284 47.619 20.97 0.00 0.00 4.70
3114 5482 1.667724 CTGCAGTGGAAATAAGCTCCG 59.332 52.381 5.25 0.00 35.55 4.63
3130 5498 2.691011 GCTCCGGAGAATCTCTAGTGTT 59.309 50.000 35.69 0.00 33.73 3.32
3135 5503 5.535406 TCCGGAGAATCTCTAGTGTTTATCC 59.465 44.000 10.38 14.92 33.73 2.59
3139 5507 8.455682 CGGAGAATCTCTAGTGTTTATCCTATC 58.544 40.741 19.46 2.92 33.73 2.08
3140 5508 8.745590 GGAGAATCTCTAGTGTTTATCCTATCC 58.254 40.741 16.61 4.26 33.73 2.59
3141 5509 8.658840 AGAATCTCTAGTGTTTATCCTATCCC 57.341 38.462 0.00 0.00 0.00 3.85
3142 5510 8.235230 AGAATCTCTAGTGTTTATCCTATCCCA 58.765 37.037 0.00 0.00 0.00 4.37
3143 5511 8.429237 AATCTCTAGTGTTTATCCTATCCCAG 57.571 38.462 0.00 0.00 0.00 4.45
3145 5513 6.039415 TCTAGTGTTTATCCTATCCCAGGT 57.961 41.667 0.00 0.00 45.71 4.00
3146 5514 6.075984 TCTAGTGTTTATCCTATCCCAGGTC 58.924 44.000 0.00 0.00 45.71 3.85
3147 5515 4.631234 AGTGTTTATCCTATCCCAGGTCA 58.369 43.478 0.00 0.00 45.71 4.02
3148 5516 4.409247 AGTGTTTATCCTATCCCAGGTCAC 59.591 45.833 0.00 0.00 45.71 3.67
3149 5517 4.409247 GTGTTTATCCTATCCCAGGTCACT 59.591 45.833 0.00 0.00 45.71 3.41
3150 5518 4.654262 TGTTTATCCTATCCCAGGTCACTC 59.346 45.833 0.00 0.00 45.71 3.51
3151 5519 4.834406 TTATCCTATCCCAGGTCACTCT 57.166 45.455 0.00 0.00 45.71 3.24
3152 5520 2.461300 TCCTATCCCAGGTCACTCTG 57.539 55.000 0.00 0.00 45.71 3.35
3153 5521 0.755686 CCTATCCCAGGTCACTCTGC 59.244 60.000 0.00 0.00 39.91 4.26
3154 5522 0.387202 CTATCCCAGGTCACTCTGCG 59.613 60.000 0.00 0.00 33.64 5.18
3155 5523 0.033503 TATCCCAGGTCACTCTGCGA 60.034 55.000 0.00 0.00 33.64 5.10
3156 5524 1.608717 ATCCCAGGTCACTCTGCGAC 61.609 60.000 0.00 0.00 33.64 5.19
3162 5530 2.522060 GTCACTCTGCGACCAACTG 58.478 57.895 0.00 0.00 0.00 3.16
3163 5531 0.032130 GTCACTCTGCGACCAACTGA 59.968 55.000 0.00 0.00 0.00 3.41
3164 5532 0.969149 TCACTCTGCGACCAACTGAT 59.031 50.000 0.00 0.00 0.00 2.90
3165 5533 1.344438 TCACTCTGCGACCAACTGATT 59.656 47.619 0.00 0.00 0.00 2.57
3166 5534 1.728971 CACTCTGCGACCAACTGATTC 59.271 52.381 0.00 0.00 0.00 2.52
3167 5535 0.994995 CTCTGCGACCAACTGATTCG 59.005 55.000 0.00 0.00 35.82 3.34
3170 5538 3.081133 CGACCAACTGATTCGCCG 58.919 61.111 0.00 0.00 0.00 6.46
3171 5539 1.736645 CGACCAACTGATTCGCCGT 60.737 57.895 0.00 0.00 0.00 5.68
3172 5540 1.289109 CGACCAACTGATTCGCCGTT 61.289 55.000 0.00 0.00 0.00 4.44
3173 5541 0.442699 GACCAACTGATTCGCCGTTC 59.557 55.000 0.00 0.00 0.00 3.95
3174 5542 0.034896 ACCAACTGATTCGCCGTTCT 59.965 50.000 0.00 0.00 0.00 3.01
3175 5543 0.443869 CCAACTGATTCGCCGTTCTG 59.556 55.000 0.00 0.00 0.00 3.02
3176 5544 0.443869 CAACTGATTCGCCGTTCTGG 59.556 55.000 0.00 0.00 42.50 3.86
3177 5545 0.320374 AACTGATTCGCCGTTCTGGA 59.680 50.000 0.00 0.00 42.00 3.86
3178 5546 0.320374 ACTGATTCGCCGTTCTGGAA 59.680 50.000 0.00 0.00 42.00 3.53
3179 5547 1.002366 CTGATTCGCCGTTCTGGAAG 58.998 55.000 0.00 0.00 42.00 3.46
3180 5548 0.391130 TGATTCGCCGTTCTGGAAGG 60.391 55.000 0.00 0.00 42.00 3.46
3181 5549 1.078426 ATTCGCCGTTCTGGAAGGG 60.078 57.895 15.25 15.25 46.16 3.95
3182 5550 2.536997 ATTCGCCGTTCTGGAAGGGG 62.537 60.000 19.37 13.49 44.23 4.79
3184 5552 4.035102 GCCGTTCTGGAAGGGGCT 62.035 66.667 19.37 0.00 44.23 5.19
3185 5553 2.269241 CCGTTCTGGAAGGGGCTC 59.731 66.667 12.61 0.00 41.34 4.70
3186 5554 2.592993 CCGTTCTGGAAGGGGCTCA 61.593 63.158 12.61 0.00 41.34 4.26
3187 5555 1.604378 CGTTCTGGAAGGGGCTCAT 59.396 57.895 0.00 0.00 0.00 2.90
3188 5556 0.745845 CGTTCTGGAAGGGGCTCATG 60.746 60.000 0.00 0.00 0.00 3.07
3189 5557 0.620556 GTTCTGGAAGGGGCTCATGA 59.379 55.000 0.00 0.00 0.00 3.07
3190 5558 0.914644 TTCTGGAAGGGGCTCATGAG 59.085 55.000 18.84 18.84 0.00 2.90
3191 5559 0.043183 TCTGGAAGGGGCTCATGAGA 59.957 55.000 27.04 1.45 0.00 3.27
3192 5560 0.914644 CTGGAAGGGGCTCATGAGAA 59.085 55.000 27.04 0.01 0.00 2.87
3193 5561 1.493871 CTGGAAGGGGCTCATGAGAAT 59.506 52.381 27.04 6.39 0.00 2.40
3194 5562 1.492176 TGGAAGGGGCTCATGAGAATC 59.508 52.381 27.04 13.76 0.00 2.52
3213 5581 9.621629 TGAGAATCAAAACTACCTTCTTTAACA 57.378 29.630 0.00 0.00 45.97 2.41
3215 5583 9.847224 AGAATCAAAACTACCTTCTTTAACAGA 57.153 29.630 0.00 0.00 0.00 3.41
3218 5586 7.912383 TCAAAACTACCTTCTTTAACAGAACG 58.088 34.615 0.00 0.00 36.51 3.95
3219 5587 7.765360 TCAAAACTACCTTCTTTAACAGAACGA 59.235 33.333 0.00 0.00 36.51 3.85
3220 5588 7.710766 AAACTACCTTCTTTAACAGAACGAG 57.289 36.000 0.00 0.00 36.51 4.18
3221 5589 5.780984 ACTACCTTCTTTAACAGAACGAGG 58.219 41.667 0.00 0.00 36.51 4.63
3222 5590 4.684484 ACCTTCTTTAACAGAACGAGGT 57.316 40.909 0.00 0.00 36.51 3.85
3223 5591 4.377897 ACCTTCTTTAACAGAACGAGGTG 58.622 43.478 0.00 0.00 36.60 4.00
3224 5592 4.141779 ACCTTCTTTAACAGAACGAGGTGT 60.142 41.667 0.00 0.00 36.60 4.16
3225 5593 5.069516 ACCTTCTTTAACAGAACGAGGTGTA 59.930 40.000 0.00 0.00 36.60 2.90
3226 5594 6.164176 CCTTCTTTAACAGAACGAGGTGTAT 58.836 40.000 0.00 0.00 36.51 2.29
3227 5595 6.649557 CCTTCTTTAACAGAACGAGGTGTATT 59.350 38.462 0.00 0.00 36.51 1.89
3228 5596 7.360101 CCTTCTTTAACAGAACGAGGTGTATTG 60.360 40.741 0.00 0.00 36.51 1.90
3229 5597 6.518493 TCTTTAACAGAACGAGGTGTATTGT 58.482 36.000 0.00 0.00 0.00 2.71
3230 5598 6.643770 TCTTTAACAGAACGAGGTGTATTGTC 59.356 38.462 0.00 0.00 0.00 3.18
3231 5599 2.942710 ACAGAACGAGGTGTATTGTCG 58.057 47.619 0.00 0.00 39.63 4.35
3232 5600 2.259618 CAGAACGAGGTGTATTGTCGG 58.740 52.381 0.00 0.00 38.03 4.79
3233 5601 1.891150 AGAACGAGGTGTATTGTCGGT 59.109 47.619 0.00 0.00 38.03 4.69
3234 5602 3.084039 AGAACGAGGTGTATTGTCGGTA 58.916 45.455 0.00 0.00 38.03 4.02
3235 5603 3.507233 AGAACGAGGTGTATTGTCGGTAA 59.493 43.478 0.00 0.00 38.03 2.85
3236 5604 4.159135 AGAACGAGGTGTATTGTCGGTAAT 59.841 41.667 0.00 0.00 38.03 1.89
3237 5605 3.777478 ACGAGGTGTATTGTCGGTAATG 58.223 45.455 0.00 0.00 38.03 1.90
3238 5606 3.120792 CGAGGTGTATTGTCGGTAATGG 58.879 50.000 0.00 0.00 0.00 3.16
3239 5607 2.870411 GAGGTGTATTGTCGGTAATGGC 59.130 50.000 0.00 0.00 0.00 4.40
3240 5608 2.237643 AGGTGTATTGTCGGTAATGGCA 59.762 45.455 0.00 0.00 0.00 4.92
3241 5609 2.612212 GGTGTATTGTCGGTAATGGCAG 59.388 50.000 0.00 0.00 0.00 4.85
3242 5610 2.031683 GTGTATTGTCGGTAATGGCAGC 59.968 50.000 0.00 0.00 0.00 5.25
3243 5611 2.285083 GTATTGTCGGTAATGGCAGCA 58.715 47.619 0.00 0.00 0.00 4.41
3244 5612 1.832883 ATTGTCGGTAATGGCAGCAA 58.167 45.000 0.00 0.00 0.00 3.91
3245 5613 0.878416 TTGTCGGTAATGGCAGCAAC 59.122 50.000 0.00 0.00 0.00 4.17
3246 5614 0.250510 TGTCGGTAATGGCAGCAACA 60.251 50.000 0.00 0.00 0.00 3.33
3247 5615 0.168128 GTCGGTAATGGCAGCAACAC 59.832 55.000 0.00 0.00 0.00 3.32
3248 5616 0.036164 TCGGTAATGGCAGCAACACT 59.964 50.000 0.00 0.00 0.00 3.55
3249 5617 1.276705 TCGGTAATGGCAGCAACACTA 59.723 47.619 0.00 0.00 0.00 2.74
3250 5618 1.665679 CGGTAATGGCAGCAACACTAG 59.334 52.381 0.00 0.00 0.00 2.57
3251 5619 2.676750 CGGTAATGGCAGCAACACTAGA 60.677 50.000 0.00 0.00 0.00 2.43
3252 5620 3.545703 GGTAATGGCAGCAACACTAGAT 58.454 45.455 0.00 0.00 0.00 1.98
3253 5621 3.947834 GGTAATGGCAGCAACACTAGATT 59.052 43.478 0.00 0.00 0.00 2.40
3254 5622 4.035675 GGTAATGGCAGCAACACTAGATTC 59.964 45.833 0.00 0.00 0.00 2.52
3255 5623 3.641434 ATGGCAGCAACACTAGATTCT 57.359 42.857 0.00 0.00 0.00 2.40
3256 5624 2.703416 TGGCAGCAACACTAGATTCTG 58.297 47.619 0.00 2.50 0.00 3.02
3257 5625 2.012673 GGCAGCAACACTAGATTCTGG 58.987 52.381 0.00 0.00 0.00 3.86
3258 5626 2.012673 GCAGCAACACTAGATTCTGGG 58.987 52.381 0.00 0.00 0.00 4.45
3259 5627 2.355108 GCAGCAACACTAGATTCTGGGA 60.355 50.000 0.00 0.00 0.00 4.37
3260 5628 3.529533 CAGCAACACTAGATTCTGGGAG 58.470 50.000 0.00 0.00 0.00 4.30
3261 5629 2.503356 AGCAACACTAGATTCTGGGAGG 59.497 50.000 0.00 0.00 0.00 4.30
3262 5630 2.501723 GCAACACTAGATTCTGGGAGGA 59.498 50.000 0.00 0.00 0.00 3.71
3263 5631 3.135530 GCAACACTAGATTCTGGGAGGAT 59.864 47.826 0.00 0.00 0.00 3.24
3264 5632 4.345257 GCAACACTAGATTCTGGGAGGATA 59.655 45.833 0.00 0.00 0.00 2.59
3265 5633 5.740513 GCAACACTAGATTCTGGGAGGATAC 60.741 48.000 0.00 0.00 0.00 2.24
3266 5634 4.145807 ACACTAGATTCTGGGAGGATACG 58.854 47.826 0.00 0.00 46.39 3.06
3267 5635 4.145807 CACTAGATTCTGGGAGGATACGT 58.854 47.826 0.00 0.00 46.39 3.57
3268 5636 4.022762 CACTAGATTCTGGGAGGATACGTG 60.023 50.000 0.00 0.00 46.39 4.49
3269 5637 2.320781 AGATTCTGGGAGGATACGTGG 58.679 52.381 0.00 0.00 46.39 4.94
3270 5638 0.759346 ATTCTGGGAGGATACGTGGC 59.241 55.000 0.00 0.00 46.39 5.01
3271 5639 0.325296 TTCTGGGAGGATACGTGGCT 60.325 55.000 0.00 0.00 46.39 4.75
3272 5640 0.325296 TCTGGGAGGATACGTGGCTT 60.325 55.000 0.00 0.00 46.39 4.35
3273 5641 0.179073 CTGGGAGGATACGTGGCTTG 60.179 60.000 0.00 0.00 46.39 4.01
3274 5642 1.146263 GGGAGGATACGTGGCTTGG 59.854 63.158 0.00 0.00 46.39 3.61
3275 5643 1.623542 GGGAGGATACGTGGCTTGGT 61.624 60.000 0.00 0.00 46.39 3.67
3276 5644 0.462047 GGAGGATACGTGGCTTGGTG 60.462 60.000 0.00 0.00 46.39 4.17
3277 5645 0.535335 GAGGATACGTGGCTTGGTGA 59.465 55.000 0.00 0.00 46.39 4.02
3278 5646 0.249398 AGGATACGTGGCTTGGTGAC 59.751 55.000 0.00 0.00 46.39 3.67
3279 5647 0.036765 GGATACGTGGCTTGGTGACA 60.037 55.000 0.00 0.00 39.83 3.58
3288 5656 1.654220 CTTGGTGACACGCCTTTGG 59.346 57.895 0.00 0.00 42.67 3.28
3289 5657 2.406452 CTTGGTGACACGCCTTTGGC 62.406 60.000 0.00 0.00 42.67 4.52
3298 5666 2.349755 GCCTTTGGCGACCCAGTA 59.650 61.111 0.00 0.00 43.37 2.74
3299 5667 1.077716 GCCTTTGGCGACCCAGTAT 60.078 57.895 0.00 0.00 43.37 2.12
3300 5668 1.095807 GCCTTTGGCGACCCAGTATC 61.096 60.000 0.00 0.00 43.37 2.24
3301 5669 0.463833 CCTTTGGCGACCCAGTATCC 60.464 60.000 0.00 0.00 43.37 2.59
3302 5670 0.810031 CTTTGGCGACCCAGTATCCG 60.810 60.000 0.00 0.00 43.37 4.18
3303 5671 1.546589 TTTGGCGACCCAGTATCCGT 61.547 55.000 0.00 0.00 43.37 4.69
3304 5672 1.952102 TTGGCGACCCAGTATCCGTC 61.952 60.000 0.00 0.00 43.37 4.79
3305 5673 2.125961 GGCGACCCAGTATCCGTCT 61.126 63.158 0.00 0.00 0.00 4.18
3306 5674 1.359475 GCGACCCAGTATCCGTCTC 59.641 63.158 0.00 0.00 0.00 3.36
3307 5675 1.102222 GCGACCCAGTATCCGTCTCT 61.102 60.000 0.00 0.00 0.00 3.10
3308 5676 1.390565 CGACCCAGTATCCGTCTCTT 58.609 55.000 0.00 0.00 0.00 2.85
3309 5677 1.749634 CGACCCAGTATCCGTCTCTTT 59.250 52.381 0.00 0.00 0.00 2.52
3310 5678 2.947652 CGACCCAGTATCCGTCTCTTTA 59.052 50.000 0.00 0.00 0.00 1.85
3311 5679 3.568853 CGACCCAGTATCCGTCTCTTTAT 59.431 47.826 0.00 0.00 0.00 1.40
3312 5680 4.320348 CGACCCAGTATCCGTCTCTTTATC 60.320 50.000 0.00 0.00 0.00 1.75
3313 5681 3.568853 ACCCAGTATCCGTCTCTTTATCG 59.431 47.826 0.00 0.00 0.00 2.92
3314 5682 3.568853 CCCAGTATCCGTCTCTTTATCGT 59.431 47.826 0.00 0.00 0.00 3.73
3315 5683 4.758674 CCCAGTATCCGTCTCTTTATCGTA 59.241 45.833 0.00 0.00 0.00 3.43
3316 5684 5.415077 CCCAGTATCCGTCTCTTTATCGTAT 59.585 44.000 0.00 0.00 0.00 3.06
3317 5685 6.072064 CCCAGTATCCGTCTCTTTATCGTATT 60.072 42.308 0.00 0.00 0.00 1.89
3318 5686 6.802348 CCAGTATCCGTCTCTTTATCGTATTG 59.198 42.308 0.00 0.00 0.00 1.90
3319 5687 7.361127 CAGTATCCGTCTCTTTATCGTATTGT 58.639 38.462 0.00 0.00 0.00 2.71
3320 5688 7.861372 CAGTATCCGTCTCTTTATCGTATTGTT 59.139 37.037 0.00 0.00 0.00 2.83
3321 5689 8.074972 AGTATCCGTCTCTTTATCGTATTGTTC 58.925 37.037 0.00 0.00 0.00 3.18
3322 5690 6.198650 TCCGTCTCTTTATCGTATTGTTCA 57.801 37.500 0.00 0.00 0.00 3.18
3323 5691 6.263344 TCCGTCTCTTTATCGTATTGTTCAG 58.737 40.000 0.00 0.00 0.00 3.02
3324 5692 5.051641 CCGTCTCTTTATCGTATTGTTCAGC 60.052 44.000 0.00 0.00 0.00 4.26
3325 5693 5.330866 CGTCTCTTTATCGTATTGTTCAGCG 60.331 44.000 0.00 0.00 0.00 5.18
3326 5694 5.515626 GTCTCTTTATCGTATTGTTCAGCGT 59.484 40.000 0.00 0.00 0.00 5.07
3327 5695 5.742453 TCTCTTTATCGTATTGTTCAGCGTC 59.258 40.000 0.00 0.00 0.00 5.19
3328 5696 4.497966 TCTTTATCGTATTGTTCAGCGTCG 59.502 41.667 0.00 0.00 0.00 5.12
3329 5697 2.273370 ATCGTATTGTTCAGCGTCGT 57.727 45.000 0.00 0.00 0.00 4.34
3330 5698 1.333115 TCGTATTGTTCAGCGTCGTG 58.667 50.000 0.00 0.00 0.00 4.35
3331 5699 1.069091 TCGTATTGTTCAGCGTCGTGA 60.069 47.619 0.00 0.00 0.00 4.35
3332 5700 1.317611 CGTATTGTTCAGCGTCGTGAG 59.682 52.381 0.00 0.00 0.00 3.51
3333 5701 1.654105 GTATTGTTCAGCGTCGTGAGG 59.346 52.381 0.00 0.00 0.00 3.86
3334 5702 1.291877 ATTGTTCAGCGTCGTGAGGC 61.292 55.000 6.44 6.44 42.05 4.70
3340 5708 2.049063 GCGTCGTGAGGCTCTTGT 60.049 61.111 16.72 0.00 38.98 3.16
3341 5709 1.664965 GCGTCGTGAGGCTCTTGTT 60.665 57.895 16.72 0.00 38.98 2.83
3342 5710 1.891060 GCGTCGTGAGGCTCTTGTTG 61.891 60.000 16.72 4.29 38.98 3.33
3343 5711 1.862806 GTCGTGAGGCTCTTGTTGC 59.137 57.895 16.72 0.00 0.00 4.17
3350 5718 3.432186 GCTCTTGTTGCCACGGTT 58.568 55.556 0.00 0.00 0.00 4.44
3351 5719 2.624169 GCTCTTGTTGCCACGGTTA 58.376 52.632 0.00 0.00 0.00 2.85
3352 5720 1.165270 GCTCTTGTTGCCACGGTTAT 58.835 50.000 0.00 0.00 0.00 1.89
3353 5721 1.135689 GCTCTTGTTGCCACGGTTATG 60.136 52.381 0.00 0.00 0.00 1.90
3354 5722 0.878416 TCTTGTTGCCACGGTTATGC 59.122 50.000 0.00 0.00 0.00 3.14
3355 5723 0.595588 CTTGTTGCCACGGTTATGCA 59.404 50.000 0.00 0.00 0.00 3.96
3356 5724 0.595588 TTGTTGCCACGGTTATGCAG 59.404 50.000 0.00 0.00 36.21 4.41
3357 5725 0.536233 TGTTGCCACGGTTATGCAGT 60.536 50.000 0.00 0.00 36.21 4.40
3358 5726 0.168128 GTTGCCACGGTTATGCAGTC 59.832 55.000 0.00 0.00 36.21 3.51
3359 5727 0.958382 TTGCCACGGTTATGCAGTCC 60.958 55.000 0.00 0.00 36.21 3.85
3360 5728 1.376683 GCCACGGTTATGCAGTCCA 60.377 57.895 0.00 0.00 0.00 4.02
3361 5729 0.748005 GCCACGGTTATGCAGTCCAT 60.748 55.000 0.00 0.00 37.97 3.41
3362 5730 1.750193 CCACGGTTATGCAGTCCATT 58.250 50.000 0.00 0.00 35.34 3.16
3363 5731 1.670811 CCACGGTTATGCAGTCCATTC 59.329 52.381 0.00 0.00 35.34 2.67
3364 5732 1.670811 CACGGTTATGCAGTCCATTCC 59.329 52.381 0.00 0.00 35.34 3.01
3365 5733 1.280710 ACGGTTATGCAGTCCATTCCA 59.719 47.619 0.00 0.00 35.34 3.53
3366 5734 1.670811 CGGTTATGCAGTCCATTCCAC 59.329 52.381 0.00 0.00 35.34 4.02
3367 5735 2.680805 CGGTTATGCAGTCCATTCCACT 60.681 50.000 0.00 0.00 35.34 4.00
3368 5736 2.945668 GGTTATGCAGTCCATTCCACTC 59.054 50.000 0.00 0.00 35.34 3.51
3369 5737 3.609853 GTTATGCAGTCCATTCCACTCA 58.390 45.455 0.00 0.00 35.34 3.41
3370 5738 2.885135 ATGCAGTCCATTCCACTCAA 57.115 45.000 0.00 0.00 0.00 3.02
3371 5739 1.896220 TGCAGTCCATTCCACTCAAC 58.104 50.000 0.00 0.00 0.00 3.18
3372 5740 1.142667 TGCAGTCCATTCCACTCAACA 59.857 47.619 0.00 0.00 0.00 3.33
3373 5741 2.224843 TGCAGTCCATTCCACTCAACAT 60.225 45.455 0.00 0.00 0.00 2.71
3374 5742 2.821969 GCAGTCCATTCCACTCAACATT 59.178 45.455 0.00 0.00 0.00 2.71
3375 5743 3.119708 GCAGTCCATTCCACTCAACATTC 60.120 47.826 0.00 0.00 0.00 2.67
3376 5744 4.074259 CAGTCCATTCCACTCAACATTCA 58.926 43.478 0.00 0.00 0.00 2.57
3377 5745 4.155462 CAGTCCATTCCACTCAACATTCAG 59.845 45.833 0.00 0.00 0.00 3.02
3378 5746 4.074970 GTCCATTCCACTCAACATTCAGT 58.925 43.478 0.00 0.00 0.00 3.41
3379 5747 4.520492 GTCCATTCCACTCAACATTCAGTT 59.480 41.667 0.00 0.00 42.42 3.16
3380 5748 5.010012 GTCCATTCCACTCAACATTCAGTTT 59.990 40.000 0.00 0.00 38.74 2.66
3381 5749 6.206634 GTCCATTCCACTCAACATTCAGTTTA 59.793 38.462 0.00 0.00 38.74 2.01
3382 5750 6.430925 TCCATTCCACTCAACATTCAGTTTAG 59.569 38.462 0.00 0.00 38.74 1.85
3383 5751 6.349611 CCATTCCACTCAACATTCAGTTTAGG 60.350 42.308 0.00 0.00 38.74 2.69
3384 5752 5.560722 TCCACTCAACATTCAGTTTAGGA 57.439 39.130 0.00 0.00 38.74 2.94
3385 5753 5.551233 TCCACTCAACATTCAGTTTAGGAG 58.449 41.667 0.00 0.00 38.74 3.69
3386 5754 4.697352 CCACTCAACATTCAGTTTAGGAGG 59.303 45.833 0.00 0.00 38.74 4.30
3387 5755 4.697352 CACTCAACATTCAGTTTAGGAGGG 59.303 45.833 0.00 0.00 38.74 4.30
3388 5756 4.351111 ACTCAACATTCAGTTTAGGAGGGT 59.649 41.667 0.00 0.00 38.74 4.34
3389 5757 4.651778 TCAACATTCAGTTTAGGAGGGTG 58.348 43.478 0.00 0.00 38.74 4.61
3390 5758 3.073274 ACATTCAGTTTAGGAGGGTGC 57.927 47.619 0.00 0.00 0.00 5.01
3391 5759 2.644798 ACATTCAGTTTAGGAGGGTGCT 59.355 45.455 0.00 0.00 0.00 4.40
3392 5760 3.274288 CATTCAGTTTAGGAGGGTGCTC 58.726 50.000 0.00 0.00 0.00 4.26
3393 5761 0.895530 TCAGTTTAGGAGGGTGCTCG 59.104 55.000 0.00 0.00 0.00 5.03
3394 5762 0.608640 CAGTTTAGGAGGGTGCTCGT 59.391 55.000 0.00 0.00 0.00 4.18
3395 5763 0.608640 AGTTTAGGAGGGTGCTCGTG 59.391 55.000 0.00 0.00 0.00 4.35
3396 5764 0.391263 GTTTAGGAGGGTGCTCGTGG 60.391 60.000 0.00 0.00 0.00 4.94
3397 5765 1.550130 TTTAGGAGGGTGCTCGTGGG 61.550 60.000 0.00 0.00 0.00 4.61
3398 5766 2.741878 TTAGGAGGGTGCTCGTGGGT 62.742 60.000 0.00 0.00 0.00 4.51
3399 5767 4.394712 GGAGGGTGCTCGTGGGTG 62.395 72.222 0.00 0.00 0.00 4.61
3400 5768 3.311110 GAGGGTGCTCGTGGGTGA 61.311 66.667 0.00 0.00 0.00 4.02
3401 5769 2.607750 AGGGTGCTCGTGGGTGAT 60.608 61.111 0.00 0.00 0.00 3.06
3402 5770 2.125106 GGGTGCTCGTGGGTGATC 60.125 66.667 0.00 0.00 0.00 2.92
3403 5771 2.509336 GGTGCTCGTGGGTGATCG 60.509 66.667 0.00 0.00 0.00 3.69
3404 5772 2.571757 GTGCTCGTGGGTGATCGA 59.428 61.111 0.00 0.00 34.88 3.59
3405 5773 1.141881 GTGCTCGTGGGTGATCGAT 59.858 57.895 0.00 0.00 35.57 3.59
3406 5774 1.141665 TGCTCGTGGGTGATCGATG 59.858 57.895 0.54 0.00 35.57 3.84
3407 5775 1.592669 GCTCGTGGGTGATCGATGG 60.593 63.158 0.54 0.00 35.57 3.51
3408 5776 1.068083 CTCGTGGGTGATCGATGGG 59.932 63.158 0.54 0.00 35.57 4.00
3409 5777 1.380650 TCGTGGGTGATCGATGGGA 60.381 57.895 0.54 0.00 0.00 4.37
3410 5778 0.973496 TCGTGGGTGATCGATGGGAA 60.973 55.000 0.54 0.00 0.00 3.97
3411 5779 0.530650 CGTGGGTGATCGATGGGAAG 60.531 60.000 0.54 0.00 0.00 3.46
3412 5780 0.815615 GTGGGTGATCGATGGGAAGC 60.816 60.000 0.54 0.00 0.00 3.86
3413 5781 1.271127 TGGGTGATCGATGGGAAGCA 61.271 55.000 0.54 0.00 0.00 3.91
3414 5782 0.109342 GGGTGATCGATGGGAAGCAT 59.891 55.000 0.54 0.00 0.00 3.79
3415 5783 1.233019 GGTGATCGATGGGAAGCATG 58.767 55.000 0.54 0.00 0.00 4.06
3416 5784 1.233019 GTGATCGATGGGAAGCATGG 58.767 55.000 0.54 0.00 0.00 3.66
3417 5785 0.535780 TGATCGATGGGAAGCATGGC 60.536 55.000 0.54 0.00 0.00 4.40
3418 5786 0.250640 GATCGATGGGAAGCATGGCT 60.251 55.000 0.54 0.00 42.56 4.75
3428 5796 2.409948 AAGCATGGCTTCACCTAGTC 57.590 50.000 0.00 0.00 46.77 2.59
3429 5797 0.543749 AGCATGGCTTCACCTAGTCC 59.456 55.000 0.00 0.00 33.89 3.85
3430 5798 0.811616 GCATGGCTTCACCTAGTCCG 60.812 60.000 0.00 0.00 40.22 4.79
3431 5799 0.537188 CATGGCTTCACCTAGTCCGT 59.463 55.000 0.00 0.00 40.22 4.69
3432 5800 1.754803 CATGGCTTCACCTAGTCCGTA 59.245 52.381 0.00 0.00 40.22 4.02
3433 5801 1.471119 TGGCTTCACCTAGTCCGTAG 58.529 55.000 0.00 0.00 40.22 3.51
3434 5802 1.005097 TGGCTTCACCTAGTCCGTAGA 59.995 52.381 0.00 0.00 40.22 2.59
3435 5803 1.404748 GGCTTCACCTAGTCCGTAGAC 59.595 57.143 0.00 0.00 38.27 2.59
3436 5804 5.465839 TGGCTTCACCTAGTCCGTAGACT 62.466 52.174 0.84 0.84 46.01 3.24
3445 5813 1.765230 GTCCGTAGACTGATGGAGGT 58.235 55.000 0.00 0.00 40.10 3.85
3446 5814 2.100989 GTCCGTAGACTGATGGAGGTT 58.899 52.381 0.00 0.00 40.10 3.50
3447 5815 2.099427 GTCCGTAGACTGATGGAGGTTC 59.901 54.545 0.00 0.00 40.10 3.62
3448 5816 2.100197 CCGTAGACTGATGGAGGTTCA 58.900 52.381 0.00 0.00 0.00 3.18
3449 5817 2.099921 CCGTAGACTGATGGAGGTTCAG 59.900 54.545 0.00 0.00 44.95 3.02
3463 5831 1.822506 GTTCAGTTAACCCCTCAGCC 58.177 55.000 0.88 0.00 31.38 4.85
3464 5832 0.696501 TTCAGTTAACCCCTCAGCCC 59.303 55.000 0.88 0.00 0.00 5.19
3465 5833 1.078426 CAGTTAACCCCTCAGCCCG 60.078 63.158 0.88 0.00 0.00 6.13
3466 5834 1.229400 AGTTAACCCCTCAGCCCGA 60.229 57.895 0.88 0.00 0.00 5.14
3467 5835 0.620700 AGTTAACCCCTCAGCCCGAT 60.621 55.000 0.88 0.00 0.00 4.18
3468 5836 1.125633 GTTAACCCCTCAGCCCGATA 58.874 55.000 0.00 0.00 0.00 2.92
3469 5837 1.487558 GTTAACCCCTCAGCCCGATAA 59.512 52.381 0.00 0.00 0.00 1.75
3470 5838 1.420430 TAACCCCTCAGCCCGATAAG 58.580 55.000 0.00 0.00 0.00 1.73
3471 5839 0.620700 AACCCCTCAGCCCGATAAGT 60.621 55.000 0.00 0.00 0.00 2.24
3472 5840 0.620700 ACCCCTCAGCCCGATAAGTT 60.621 55.000 0.00 0.00 0.00 2.66
3473 5841 0.179045 CCCCTCAGCCCGATAAGTTG 60.179 60.000 0.00 0.00 0.00 3.16
3474 5842 0.541863 CCCTCAGCCCGATAAGTTGT 59.458 55.000 0.00 0.00 0.00 3.32
3475 5843 1.656652 CCTCAGCCCGATAAGTTGTG 58.343 55.000 0.00 0.00 0.00 3.33
3476 5844 1.066143 CCTCAGCCCGATAAGTTGTGT 60.066 52.381 0.00 0.00 0.00 3.72
3477 5845 2.615493 CCTCAGCCCGATAAGTTGTGTT 60.615 50.000 0.00 0.00 0.00 3.32
3478 5846 2.416547 CTCAGCCCGATAAGTTGTGTTG 59.583 50.000 0.00 0.00 0.00 3.33
3479 5847 1.468520 CAGCCCGATAAGTTGTGTTGG 59.531 52.381 0.00 0.00 0.00 3.77
3480 5848 1.349688 AGCCCGATAAGTTGTGTTGGA 59.650 47.619 0.00 0.00 0.00 3.53
3481 5849 2.156098 GCCCGATAAGTTGTGTTGGAA 58.844 47.619 0.00 0.00 0.00 3.53
3482 5850 2.161609 GCCCGATAAGTTGTGTTGGAAG 59.838 50.000 0.00 0.00 0.00 3.46
3483 5851 2.161609 CCCGATAAGTTGTGTTGGAAGC 59.838 50.000 0.00 0.00 0.00 3.86
3484 5852 3.074412 CCGATAAGTTGTGTTGGAAGCT 58.926 45.455 0.00 0.00 0.00 3.74
3485 5853 3.502211 CCGATAAGTTGTGTTGGAAGCTT 59.498 43.478 0.00 0.00 0.00 3.74
3486 5854 4.693566 CCGATAAGTTGTGTTGGAAGCTTA 59.306 41.667 0.00 0.00 0.00 3.09
3487 5855 5.390567 CCGATAAGTTGTGTTGGAAGCTTAC 60.391 44.000 0.11 0.11 0.00 2.34
3488 5856 5.408604 CGATAAGTTGTGTTGGAAGCTTACT 59.591 40.000 10.74 0.00 0.00 2.24
3489 5857 6.588756 CGATAAGTTGTGTTGGAAGCTTACTA 59.411 38.462 10.74 0.00 0.00 1.82
3490 5858 7.201444 CGATAAGTTGTGTTGGAAGCTTACTAG 60.201 40.741 10.74 0.00 0.00 2.57
3491 5859 5.546621 AGTTGTGTTGGAAGCTTACTAGA 57.453 39.130 10.74 0.00 0.00 2.43
3492 5860 6.115448 AGTTGTGTTGGAAGCTTACTAGAT 57.885 37.500 10.74 0.00 0.00 1.98
3493 5861 6.166982 AGTTGTGTTGGAAGCTTACTAGATC 58.833 40.000 10.74 0.00 0.00 2.75
3494 5862 6.014156 AGTTGTGTTGGAAGCTTACTAGATCT 60.014 38.462 10.74 0.00 0.00 2.75
3495 5863 5.724328 TGTGTTGGAAGCTTACTAGATCTG 58.276 41.667 10.74 0.00 0.00 2.90
3496 5864 5.112686 GTGTTGGAAGCTTACTAGATCTGG 58.887 45.833 10.74 4.69 0.00 3.86
3497 5865 4.162320 TGTTGGAAGCTTACTAGATCTGGG 59.838 45.833 10.74 3.67 0.00 4.45
3498 5866 3.309296 TGGAAGCTTACTAGATCTGGGG 58.691 50.000 10.74 1.80 0.00 4.96
3499 5867 3.052109 TGGAAGCTTACTAGATCTGGGGA 60.052 47.826 10.74 0.00 0.00 4.81
3500 5868 3.576550 GGAAGCTTACTAGATCTGGGGAG 59.423 52.174 11.17 8.54 0.00 4.30
3501 5869 3.983533 AGCTTACTAGATCTGGGGAGT 57.016 47.619 11.17 6.09 0.00 3.85
3502 5870 4.273300 AGCTTACTAGATCTGGGGAGTT 57.727 45.455 11.17 3.14 0.00 3.01
3503 5871 4.219919 AGCTTACTAGATCTGGGGAGTTC 58.780 47.826 11.17 0.00 0.00 3.01
3504 5872 3.961408 GCTTACTAGATCTGGGGAGTTCA 59.039 47.826 11.17 0.00 0.00 3.18
3505 5873 4.202172 GCTTACTAGATCTGGGGAGTTCAC 60.202 50.000 11.17 0.00 0.00 3.18
3506 5874 2.379972 ACTAGATCTGGGGAGTTCACG 58.620 52.381 11.17 0.00 0.00 4.35
3507 5875 1.683917 CTAGATCTGGGGAGTTCACGG 59.316 57.143 5.18 0.00 0.00 4.94
3508 5876 0.252284 AGATCTGGGGAGTTCACGGT 60.252 55.000 0.00 0.00 0.00 4.83
3509 5877 0.613777 GATCTGGGGAGTTCACGGTT 59.386 55.000 0.00 0.00 0.00 4.44
3510 5878 1.829222 GATCTGGGGAGTTCACGGTTA 59.171 52.381 0.00 0.00 0.00 2.85
3511 5879 1.719529 TCTGGGGAGTTCACGGTTAA 58.280 50.000 0.00 0.00 0.00 2.01
3512 5880 2.048601 TCTGGGGAGTTCACGGTTAAA 58.951 47.619 0.00 0.00 0.00 1.52
3513 5881 2.640826 TCTGGGGAGTTCACGGTTAAAT 59.359 45.455 0.00 0.00 0.00 1.40
3514 5882 3.007635 CTGGGGAGTTCACGGTTAAATC 58.992 50.000 0.00 0.00 0.00 2.17
3515 5883 2.004733 GGGGAGTTCACGGTTAAATCG 58.995 52.381 0.00 0.00 0.00 3.34
3516 5884 2.354003 GGGGAGTTCACGGTTAAATCGA 60.354 50.000 6.49 0.00 0.00 3.59
3517 5885 3.528532 GGGAGTTCACGGTTAAATCGAT 58.471 45.455 0.00 0.00 0.00 3.59
3518 5886 3.308866 GGGAGTTCACGGTTAAATCGATG 59.691 47.826 0.00 0.00 0.00 3.84
3519 5887 3.930848 GGAGTTCACGGTTAAATCGATGT 59.069 43.478 0.00 0.00 0.00 3.06
3520 5888 5.104374 GGAGTTCACGGTTAAATCGATGTA 58.896 41.667 0.00 0.00 0.00 2.29
3521 5889 5.751990 GGAGTTCACGGTTAAATCGATGTAT 59.248 40.000 0.00 0.00 0.00 2.29
3522 5890 6.919662 GGAGTTCACGGTTAAATCGATGTATA 59.080 38.462 0.00 0.00 0.00 1.47
3523 5891 7.597743 GGAGTTCACGGTTAAATCGATGTATAT 59.402 37.037 0.00 0.00 0.00 0.86
3524 5892 8.882415 AGTTCACGGTTAAATCGATGTATATT 57.118 30.769 0.00 0.00 0.00 1.28
3525 5893 8.761497 AGTTCACGGTTAAATCGATGTATATTG 58.239 33.333 0.00 0.00 0.00 1.90
3526 5894 8.757789 GTTCACGGTTAAATCGATGTATATTGA 58.242 33.333 0.00 0.00 0.00 2.57
3527 5895 9.483916 TTCACGGTTAAATCGATGTATATTGAT 57.516 29.630 0.00 0.00 38.77 2.57
3550 5918 9.764363 TGATATCATTAACACTAGTGTGATTCC 57.236 33.333 28.55 18.56 46.55 3.01
3551 5919 9.988815 GATATCATTAACACTAGTGTGATTCCT 57.011 33.333 28.55 14.41 46.55 3.36
3554 5922 8.362464 TCATTAACACTAGTGTGATTCCTAGT 57.638 34.615 28.55 12.26 46.55 2.57
3555 5923 8.812972 TCATTAACACTAGTGTGATTCCTAGTT 58.187 33.333 28.55 11.54 46.55 2.24
3556 5924 9.088512 CATTAACACTAGTGTGATTCCTAGTTC 57.911 37.037 28.55 0.00 46.55 3.01
3557 5925 5.662674 ACACTAGTGTGATTCCTAGTTCC 57.337 43.478 27.41 0.00 46.55 3.62
3558 5926 5.084519 ACACTAGTGTGATTCCTAGTTCCA 58.915 41.667 27.41 0.00 46.55 3.53
3559 5927 5.542635 ACACTAGTGTGATTCCTAGTTCCAA 59.457 40.000 27.41 0.00 46.55 3.53
3560 5928 6.042781 ACACTAGTGTGATTCCTAGTTCCAAA 59.957 38.462 27.41 0.00 46.55 3.28
3561 5929 6.591834 CACTAGTGTGATTCCTAGTTCCAAAG 59.408 42.308 15.06 0.00 46.55 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.407437 CCATTAGAGTGGTGTGGAGGC 60.407 57.143 0.00 0.00 34.46 4.70
20 21 5.604231 TGTGGATGCTAATCTCCATTAGAGT 59.396 40.000 6.02 0.00 43.07 3.24
27 28 2.173356 CCCTTGTGGATGCTAATCTCCA 59.827 50.000 0.00 0.00 39.23 3.86
51 52 2.740452 GACGATGTATCCCGAAGTTCC 58.260 52.381 0.00 0.00 0.00 3.62
58 59 1.069838 CAGAGACGACGATGTATCCCG 60.070 57.143 0.00 0.00 30.45 5.14
77 78 1.123077 AGAGATAACCGAGGCATGCA 58.877 50.000 21.36 0.00 0.00 3.96
80 81 2.633481 GGGTAAGAGATAACCGAGGCAT 59.367 50.000 0.00 0.00 36.57 4.40
87 88 1.343789 GGGCTCGGGTAAGAGATAACC 59.656 57.143 0.00 0.00 40.57 2.85
113 114 5.248640 AGCTATCACAAAGTAAGTGCACAT 58.751 37.500 21.04 10.23 36.93 3.21
119 120 7.162082 AGCACTAAAGCTATCACAAAGTAAGT 58.838 34.615 0.00 0.00 44.50 2.24
193 194 3.951037 TCAACTATGTGCACCAACAACTT 59.049 39.130 15.69 0.00 32.81 2.66
196 197 2.293122 GCTCAACTATGTGCACCAACAA 59.707 45.455 15.69 0.00 43.72 2.83
201 202 2.093447 ACTAGGCTCAACTATGTGCACC 60.093 50.000 15.69 0.00 45.55 5.01
253 254 7.142021 TGAACAAATGCGAAATAAAACTAGCA 58.858 30.769 0.00 0.00 39.02 3.49
254 255 7.561237 TGAACAAATGCGAAATAAAACTAGC 57.439 32.000 0.00 0.00 0.00 3.42
266 267 3.305064 GGTTTAGGCTTGAACAAATGCGA 60.305 43.478 5.84 0.00 0.00 5.10
268 269 3.988819 TGGTTTAGGCTTGAACAAATGC 58.011 40.909 5.84 0.00 0.00 3.56
319 320 1.202463 CGTGGATGTTGCCTAGAGGAG 60.202 57.143 0.00 0.00 37.39 3.69
320 321 0.824109 CGTGGATGTTGCCTAGAGGA 59.176 55.000 0.00 0.00 37.39 3.71
343 344 2.947652 AGATGTGCATATGCCAGTGAAC 59.052 45.455 24.54 14.89 41.18 3.18
350 351 1.242076 GGTGGAGATGTGCATATGCC 58.758 55.000 24.54 15.85 41.18 4.40
375 376 3.616821 CCACACATACGTGATCGACATTT 59.383 43.478 0.00 0.00 46.80 2.32
381 382 2.097629 AGAGTCCACACATACGTGATCG 59.902 50.000 0.00 0.00 46.80 3.69
391 392 5.123227 CAACTCCTTTAAAGAGTCCACACA 58.877 41.667 16.98 0.00 43.77 3.72
392 393 4.023963 GCAACTCCTTTAAAGAGTCCACAC 60.024 45.833 16.98 4.20 43.77 3.82
402 403 3.065648 GTCACAACCGCAACTCCTTTAAA 59.934 43.478 0.00 0.00 0.00 1.52
418 419 3.126001 AGATTCTTCCAAGCGTCACAA 57.874 42.857 0.00 0.00 0.00 3.33
424 425 4.692625 TCTCTTGAAAGATTCTTCCAAGCG 59.307 41.667 17.76 13.19 33.93 4.68
436 437 4.081972 CCTCCTCACGAATCTCTTGAAAGA 60.082 45.833 0.00 0.00 0.00 2.52
449 450 0.323816 AGCATGTCTCCTCCTCACGA 60.324 55.000 0.00 0.00 0.00 4.35
497 551 3.441101 ACTACCAGATGCTTACCACTGA 58.559 45.455 0.00 0.00 32.90 3.41
532 586 8.738199 TTAAAGATATATACCGCAAACTCTCG 57.262 34.615 0.00 0.00 0.00 4.04
559 613 9.688091 GACATGAGAGGTGGTCTAATAGATATA 57.312 37.037 0.00 0.00 34.71 0.86
560 614 8.173412 TGACATGAGAGGTGGTCTAATAGATAT 58.827 37.037 0.00 0.00 34.71 1.63
561 615 7.526918 TGACATGAGAGGTGGTCTAATAGATA 58.473 38.462 0.00 0.00 34.71 1.98
646 2906 6.704937 TGAGATGATATTTCTCATGTGTCTGC 59.295 38.462 12.76 0.00 43.49 4.26
938 3241 2.573869 CTCTTCGCGGCAGGAGAA 59.426 61.111 6.13 0.00 33.22 2.87
1222 3531 0.381445 TTGTCGTCGACGGAGAACAA 59.619 50.000 35.05 31.20 40.29 2.83
1714 4030 7.361286 GGGAGCACTATAACTTGAACAAAGAAG 60.361 40.741 0.00 0.00 39.38 2.85
1782 4098 3.436704 ACTGATACGTGGCATTCAGTTTG 59.563 43.478 15.23 0.00 44.77 2.93
1945 4268 3.582647 TCACCACATCATTCAGTGTAGGT 59.417 43.478 0.00 0.00 33.99 3.08
2049 4372 5.027460 TCCAGCACTACTAACCAGGAATAA 58.973 41.667 0.00 0.00 0.00 1.40
2050 4373 4.616553 TCCAGCACTACTAACCAGGAATA 58.383 43.478 0.00 0.00 0.00 1.75
2090 4413 9.830975 ACATTTAACTTTGTGAAAATTTAGCCT 57.169 25.926 0.00 0.00 0.00 4.58
2150 4473 5.126869 ACAGATTCGATCAGATCAGACAACT 59.873 40.000 11.12 5.61 0.00 3.16
2208 4536 6.854496 TGAAGTTGTGTGTACCTTATTGTC 57.146 37.500 0.00 0.00 0.00 3.18
2304 4636 6.380846 AGCCCATTTATAATTGTTCTGCAGAA 59.619 34.615 25.16 25.16 0.00 3.02
2369 4701 4.772624 TGGAGGGAATAGAGTATCAATCCG 59.227 45.833 0.00 0.00 37.82 4.18
2426 4758 1.313772 TCTCTACGGATGAGCTGCTC 58.686 55.000 22.38 22.38 0.00 4.26
2534 4866 6.097915 TCCGATGAGTTTTTACTCTTGTCT 57.902 37.500 6.83 0.00 37.62 3.41
2619 4951 5.178096 TGAGAATAATGGCTCCTCACAAA 57.822 39.130 0.00 0.00 0.00 2.83
2651 4983 3.936902 TGCACTCAAAAACGACAGTAC 57.063 42.857 0.00 0.00 0.00 2.73
2709 5056 8.939201 TGTATTTTTGCAGTTCAATCTGAAAA 57.061 26.923 0.00 0.00 40.10 2.29
2713 5060 8.225107 CCAAATGTATTTTTGCAGTTCAATCTG 58.775 33.333 0.00 0.00 35.67 2.90
2714 5061 7.933033 ACCAAATGTATTTTTGCAGTTCAATCT 59.067 29.630 0.00 0.00 35.67 2.40
2769 5116 6.868864 TGTAGAACAATAGTTTCTGCAGAGAC 59.131 38.462 25.79 25.79 38.30 3.36
2774 5121 7.497579 TCAAACTGTAGAACAATAGTTTCTGCA 59.502 33.333 0.00 3.39 40.32 4.41
2794 5141 6.476243 AATGCGATTAACGTTACTCAAACT 57.524 33.333 21.20 4.63 44.60 2.66
2801 5148 5.063060 AGTGAGGAAATGCGATTAACGTTAC 59.937 40.000 7.70 0.00 44.60 2.50
2845 5192 2.936202 CCTATTACAGGGCAGCAACAT 58.064 47.619 0.00 0.00 41.26 2.71
2931 5297 7.330208 CCAATTTTTGTTGCCAATCTCTAAGAG 59.670 37.037 0.00 0.00 0.00 2.85
3006 5373 4.102524 ACATTGCTGAGGTTATCCGGATTA 59.897 41.667 24.71 11.43 39.05 1.75
3009 5376 1.837439 ACATTGCTGAGGTTATCCGGA 59.163 47.619 6.61 6.61 39.05 5.14
3012 5379 4.096984 CCTTTGACATTGCTGAGGTTATCC 59.903 45.833 0.00 0.00 0.00 2.59
3052 5420 1.518102 GAAACTGTTTGTGCACATGCG 59.482 47.619 22.39 11.91 45.83 4.73
3057 5425 4.346129 CTCTGAAGAAACTGTTTGTGCAC 58.654 43.478 10.75 10.75 0.00 4.57
3113 5481 6.642707 AGGATAAACACTAGAGATTCTCCG 57.357 41.667 10.09 4.75 0.00 4.63
3114 5482 8.745590 GGATAGGATAAACACTAGAGATTCTCC 58.254 40.741 10.09 1.57 0.00 3.71
3135 5503 0.387202 CGCAGAGTGACCTGGGATAG 59.613 60.000 10.94 0.00 46.26 2.08
3139 5507 2.262915 GTCGCAGAGTGACCTGGG 59.737 66.667 10.39 10.39 45.17 4.45
3144 5512 0.032130 TCAGTTGGTCGCAGAGTGAC 59.968 55.000 2.25 2.25 41.69 3.67
3145 5513 0.969149 ATCAGTTGGTCGCAGAGTGA 59.031 50.000 0.00 0.00 36.95 3.41
3146 5514 1.728971 GAATCAGTTGGTCGCAGAGTG 59.271 52.381 0.00 0.00 36.95 3.51
3147 5515 1.670087 CGAATCAGTTGGTCGCAGAGT 60.670 52.381 0.00 0.00 36.95 3.24
3148 5516 0.994995 CGAATCAGTTGGTCGCAGAG 59.005 55.000 0.00 0.00 36.95 3.35
3149 5517 3.122150 CGAATCAGTTGGTCGCAGA 57.878 52.632 0.00 0.00 0.00 4.26
3153 5521 1.289109 AACGGCGAATCAGTTGGTCG 61.289 55.000 16.62 0.00 45.01 4.79
3154 5522 0.442699 GAACGGCGAATCAGTTGGTC 59.557 55.000 16.62 0.00 33.26 4.02
3155 5523 0.034896 AGAACGGCGAATCAGTTGGT 59.965 50.000 16.62 0.00 33.26 3.67
3156 5524 0.443869 CAGAACGGCGAATCAGTTGG 59.556 55.000 16.62 0.00 33.26 3.77
3157 5525 0.443869 CCAGAACGGCGAATCAGTTG 59.556 55.000 16.62 6.10 33.26 3.16
3158 5526 0.320374 TCCAGAACGGCGAATCAGTT 59.680 50.000 16.62 0.00 35.80 3.16
3159 5527 0.320374 TTCCAGAACGGCGAATCAGT 59.680 50.000 16.62 0.00 33.14 3.41
3160 5528 1.002366 CTTCCAGAACGGCGAATCAG 58.998 55.000 16.62 8.38 33.14 2.90
3161 5529 0.391130 CCTTCCAGAACGGCGAATCA 60.391 55.000 16.62 0.00 33.14 2.57
3162 5530 1.090052 CCCTTCCAGAACGGCGAATC 61.090 60.000 16.62 11.85 33.14 2.52
3163 5531 1.078426 CCCTTCCAGAACGGCGAAT 60.078 57.895 16.62 0.54 33.14 3.34
3164 5532 2.345991 CCCTTCCAGAACGGCGAA 59.654 61.111 16.62 0.00 33.14 4.70
3165 5533 3.702048 CCCCTTCCAGAACGGCGA 61.702 66.667 16.62 0.00 33.14 5.54
3167 5535 3.978571 GAGCCCCTTCCAGAACGGC 62.979 68.421 5.85 5.85 40.03 5.68
3168 5536 1.915078 ATGAGCCCCTTCCAGAACGG 61.915 60.000 0.00 0.00 0.00 4.44
3169 5537 0.745845 CATGAGCCCCTTCCAGAACG 60.746 60.000 0.00 0.00 0.00 3.95
3170 5538 0.620556 TCATGAGCCCCTTCCAGAAC 59.379 55.000 0.00 0.00 0.00 3.01
3171 5539 0.914644 CTCATGAGCCCCTTCCAGAA 59.085 55.000 10.38 0.00 0.00 3.02
3172 5540 0.043183 TCTCATGAGCCCCTTCCAGA 59.957 55.000 18.36 0.00 0.00 3.86
3173 5541 0.914644 TTCTCATGAGCCCCTTCCAG 59.085 55.000 18.36 0.00 0.00 3.86
3174 5542 1.492176 GATTCTCATGAGCCCCTTCCA 59.508 52.381 18.36 0.00 0.00 3.53
3175 5543 1.492176 TGATTCTCATGAGCCCCTTCC 59.508 52.381 18.36 3.48 0.00 3.46
3176 5544 3.287867 TTGATTCTCATGAGCCCCTTC 57.712 47.619 18.36 9.84 0.00 3.46
3177 5545 3.744940 TTTGATTCTCATGAGCCCCTT 57.255 42.857 18.36 0.37 0.00 3.95
3178 5546 3.011032 AGTTTTGATTCTCATGAGCCCCT 59.989 43.478 18.36 2.00 0.00 4.79
3179 5547 3.359950 AGTTTTGATTCTCATGAGCCCC 58.640 45.455 18.36 9.14 0.00 5.80
3180 5548 4.336713 GGTAGTTTTGATTCTCATGAGCCC 59.663 45.833 18.36 9.48 0.00 5.19
3181 5549 5.189180 AGGTAGTTTTGATTCTCATGAGCC 58.811 41.667 18.36 8.49 0.00 4.70
3182 5550 6.597280 AGAAGGTAGTTTTGATTCTCATGAGC 59.403 38.462 18.36 4.87 0.00 4.26
3183 5551 8.558973 AAGAAGGTAGTTTTGATTCTCATGAG 57.441 34.615 17.07 17.07 30.16 2.90
3184 5552 8.924511 AAAGAAGGTAGTTTTGATTCTCATGA 57.075 30.769 0.00 0.00 30.16 3.07
3187 5555 9.621629 TGTTAAAGAAGGTAGTTTTGATTCTCA 57.378 29.630 0.00 0.00 30.16 3.27
3189 5557 9.847224 TCTGTTAAAGAAGGTAGTTTTGATTCT 57.153 29.630 0.00 0.00 29.54 2.40
3192 5560 8.557029 CGTTCTGTTAAAGAAGGTAGTTTTGAT 58.443 33.333 0.00 0.00 45.69 2.57
3193 5561 7.765360 TCGTTCTGTTAAAGAAGGTAGTTTTGA 59.235 33.333 4.97 0.00 45.69 2.69
3194 5562 7.912383 TCGTTCTGTTAAAGAAGGTAGTTTTG 58.088 34.615 4.97 0.00 45.69 2.44
3195 5563 7.226128 CCTCGTTCTGTTAAAGAAGGTAGTTTT 59.774 37.037 4.97 0.00 45.69 2.43
3196 5564 6.704937 CCTCGTTCTGTTAAAGAAGGTAGTTT 59.295 38.462 4.97 0.00 45.69 2.66
3197 5565 6.183360 ACCTCGTTCTGTTAAAGAAGGTAGTT 60.183 38.462 4.97 0.00 45.69 2.24
3198 5566 5.303845 ACCTCGTTCTGTTAAAGAAGGTAGT 59.696 40.000 4.97 2.00 45.69 2.73
3199 5567 5.634020 CACCTCGTTCTGTTAAAGAAGGTAG 59.366 44.000 4.97 2.45 45.69 3.18
3200 5568 5.069516 ACACCTCGTTCTGTTAAAGAAGGTA 59.930 40.000 4.97 0.00 45.69 3.08
3201 5569 4.141779 ACACCTCGTTCTGTTAAAGAAGGT 60.142 41.667 4.97 0.00 45.69 3.50
3202 5570 4.377897 ACACCTCGTTCTGTTAAAGAAGG 58.622 43.478 0.00 0.00 45.69 3.46
3203 5571 7.170998 ACAATACACCTCGTTCTGTTAAAGAAG 59.829 37.037 0.00 0.00 45.69 2.85
3204 5572 6.987992 ACAATACACCTCGTTCTGTTAAAGAA 59.012 34.615 0.00 0.00 42.83 2.52
3205 5573 6.518493 ACAATACACCTCGTTCTGTTAAAGA 58.482 36.000 0.00 0.00 0.00 2.52
3206 5574 6.399669 CGACAATACACCTCGTTCTGTTAAAG 60.400 42.308 0.00 0.00 0.00 1.85
3207 5575 5.403166 CGACAATACACCTCGTTCTGTTAAA 59.597 40.000 0.00 0.00 0.00 1.52
3208 5576 4.919168 CGACAATACACCTCGTTCTGTTAA 59.081 41.667 0.00 0.00 0.00 2.01
3209 5577 4.478699 CGACAATACACCTCGTTCTGTTA 58.521 43.478 0.00 0.00 0.00 2.41
3210 5578 3.314553 CGACAATACACCTCGTTCTGTT 58.685 45.455 0.00 0.00 0.00 3.16
3211 5579 2.352421 CCGACAATACACCTCGTTCTGT 60.352 50.000 0.00 0.00 0.00 3.41
3212 5580 2.259618 CCGACAATACACCTCGTTCTG 58.740 52.381 0.00 0.00 0.00 3.02
3213 5581 1.891150 ACCGACAATACACCTCGTTCT 59.109 47.619 0.00 0.00 0.00 3.01
3214 5582 2.358939 ACCGACAATACACCTCGTTC 57.641 50.000 0.00 0.00 0.00 3.95
3215 5583 3.940209 TTACCGACAATACACCTCGTT 57.060 42.857 0.00 0.00 0.00 3.85
3216 5584 3.429822 CCATTACCGACAATACACCTCGT 60.430 47.826 0.00 0.00 0.00 4.18
3217 5585 3.120792 CCATTACCGACAATACACCTCG 58.879 50.000 0.00 0.00 0.00 4.63
3218 5586 2.870411 GCCATTACCGACAATACACCTC 59.130 50.000 0.00 0.00 0.00 3.85
3219 5587 2.237643 TGCCATTACCGACAATACACCT 59.762 45.455 0.00 0.00 0.00 4.00
3220 5588 2.612212 CTGCCATTACCGACAATACACC 59.388 50.000 0.00 0.00 0.00 4.16
3221 5589 2.031683 GCTGCCATTACCGACAATACAC 59.968 50.000 0.00 0.00 0.00 2.90
3222 5590 2.285083 GCTGCCATTACCGACAATACA 58.715 47.619 0.00 0.00 0.00 2.29
3223 5591 2.285083 TGCTGCCATTACCGACAATAC 58.715 47.619 0.00 0.00 0.00 1.89
3224 5592 2.680841 GTTGCTGCCATTACCGACAATA 59.319 45.455 0.00 0.00 0.00 1.90
3225 5593 1.472480 GTTGCTGCCATTACCGACAAT 59.528 47.619 0.00 0.00 0.00 2.71
3226 5594 0.878416 GTTGCTGCCATTACCGACAA 59.122 50.000 0.00 0.00 0.00 3.18
3227 5595 0.250510 TGTTGCTGCCATTACCGACA 60.251 50.000 0.00 0.00 0.00 4.35
3228 5596 0.168128 GTGTTGCTGCCATTACCGAC 59.832 55.000 0.00 0.00 0.00 4.79
3229 5597 0.036164 AGTGTTGCTGCCATTACCGA 59.964 50.000 0.00 0.00 0.00 4.69
3230 5598 1.665679 CTAGTGTTGCTGCCATTACCG 59.334 52.381 0.00 0.00 0.00 4.02
3231 5599 2.985896 TCTAGTGTTGCTGCCATTACC 58.014 47.619 0.00 0.00 0.00 2.85
3232 5600 4.878397 AGAATCTAGTGTTGCTGCCATTAC 59.122 41.667 0.00 0.00 0.00 1.89
3233 5601 4.877823 CAGAATCTAGTGTTGCTGCCATTA 59.122 41.667 0.00 0.00 0.00 1.90
3234 5602 3.693085 CAGAATCTAGTGTTGCTGCCATT 59.307 43.478 0.00 0.00 0.00 3.16
3235 5603 3.276857 CAGAATCTAGTGTTGCTGCCAT 58.723 45.455 0.00 0.00 0.00 4.40
3236 5604 2.616256 CCAGAATCTAGTGTTGCTGCCA 60.616 50.000 0.00 0.00 0.00 4.92
3237 5605 2.012673 CCAGAATCTAGTGTTGCTGCC 58.987 52.381 0.00 0.00 0.00 4.85
3238 5606 2.012673 CCCAGAATCTAGTGTTGCTGC 58.987 52.381 0.00 0.00 0.00 5.25
3239 5607 3.529533 CTCCCAGAATCTAGTGTTGCTG 58.470 50.000 0.00 0.00 0.00 4.41
3240 5608 2.503356 CCTCCCAGAATCTAGTGTTGCT 59.497 50.000 0.00 0.00 0.00 3.91
3241 5609 2.501723 TCCTCCCAGAATCTAGTGTTGC 59.498 50.000 0.00 0.00 0.00 4.17
3242 5610 5.508153 CGTATCCTCCCAGAATCTAGTGTTG 60.508 48.000 0.00 0.00 0.00 3.33
3243 5611 4.585162 CGTATCCTCCCAGAATCTAGTGTT 59.415 45.833 0.00 0.00 0.00 3.32
3244 5612 4.145807 CGTATCCTCCCAGAATCTAGTGT 58.854 47.826 0.00 0.00 0.00 3.55
3245 5613 4.022762 CACGTATCCTCCCAGAATCTAGTG 60.023 50.000 0.00 0.00 0.00 2.74
3246 5614 4.145807 CACGTATCCTCCCAGAATCTAGT 58.854 47.826 0.00 0.00 0.00 2.57
3247 5615 3.508012 CCACGTATCCTCCCAGAATCTAG 59.492 52.174 0.00 0.00 0.00 2.43
3248 5616 3.497332 CCACGTATCCTCCCAGAATCTA 58.503 50.000 0.00 0.00 0.00 1.98
3249 5617 2.320781 CCACGTATCCTCCCAGAATCT 58.679 52.381 0.00 0.00 0.00 2.40
3250 5618 1.270358 GCCACGTATCCTCCCAGAATC 60.270 57.143 0.00 0.00 0.00 2.52
3251 5619 0.759346 GCCACGTATCCTCCCAGAAT 59.241 55.000 0.00 0.00 0.00 2.40
3252 5620 0.325296 AGCCACGTATCCTCCCAGAA 60.325 55.000 0.00 0.00 0.00 3.02
3253 5621 0.325296 AAGCCACGTATCCTCCCAGA 60.325 55.000 0.00 0.00 0.00 3.86
3254 5622 0.179073 CAAGCCACGTATCCTCCCAG 60.179 60.000 0.00 0.00 0.00 4.45
3255 5623 1.622607 CCAAGCCACGTATCCTCCCA 61.623 60.000 0.00 0.00 0.00 4.37
3256 5624 1.146263 CCAAGCCACGTATCCTCCC 59.854 63.158 0.00 0.00 0.00 4.30
3257 5625 0.462047 CACCAAGCCACGTATCCTCC 60.462 60.000 0.00 0.00 0.00 4.30
3258 5626 0.535335 TCACCAAGCCACGTATCCTC 59.465 55.000 0.00 0.00 0.00 3.71
3259 5627 0.249398 GTCACCAAGCCACGTATCCT 59.751 55.000 0.00 0.00 0.00 3.24
3260 5628 0.036765 TGTCACCAAGCCACGTATCC 60.037 55.000 0.00 0.00 0.00 2.59
3261 5629 1.076332 GTGTCACCAAGCCACGTATC 58.924 55.000 0.00 0.00 0.00 2.24
3262 5630 0.669318 CGTGTCACCAAGCCACGTAT 60.669 55.000 0.00 0.00 45.00 3.06
3263 5631 1.300311 CGTGTCACCAAGCCACGTA 60.300 57.895 0.00 0.00 45.00 3.57
3264 5632 2.587753 CGTGTCACCAAGCCACGT 60.588 61.111 0.00 0.00 45.00 4.49
3269 5637 1.008538 CAAAGGCGTGTCACCAAGC 60.009 57.895 0.00 0.00 44.17 4.01
3270 5638 1.654220 CCAAAGGCGTGTCACCAAG 59.346 57.895 0.00 0.00 0.00 3.61
3271 5639 2.485795 GCCAAAGGCGTGTCACCAA 61.486 57.895 0.00 0.00 39.62 3.67
3272 5640 2.904866 GCCAAAGGCGTGTCACCA 60.905 61.111 0.00 0.00 39.62 4.17
3281 5649 1.077716 ATACTGGGTCGCCAAAGGC 60.078 57.895 0.00 0.00 46.75 4.35
3282 5650 0.463833 GGATACTGGGTCGCCAAAGG 60.464 60.000 0.00 0.00 0.00 3.11
3283 5651 0.810031 CGGATACTGGGTCGCCAAAG 60.810 60.000 0.00 0.00 0.00 2.77
3284 5652 1.219664 CGGATACTGGGTCGCCAAA 59.780 57.895 0.00 0.00 0.00 3.28
3285 5653 1.952102 GACGGATACTGGGTCGCCAA 61.952 60.000 0.00 0.00 0.00 4.52
3286 5654 2.363276 ACGGATACTGGGTCGCCA 60.363 61.111 0.00 0.00 0.00 5.69
3287 5655 2.073037 GAGACGGATACTGGGTCGCC 62.073 65.000 0.00 0.00 35.87 5.54
3288 5656 1.102222 AGAGACGGATACTGGGTCGC 61.102 60.000 0.00 0.00 35.87 5.19
3289 5657 1.390565 AAGAGACGGATACTGGGTCG 58.609 55.000 0.00 0.00 35.87 4.79
3290 5658 4.320348 CGATAAAGAGACGGATACTGGGTC 60.320 50.000 0.00 0.00 0.00 4.46
3291 5659 3.568853 CGATAAAGAGACGGATACTGGGT 59.431 47.826 0.00 0.00 0.00 4.51
3292 5660 3.568853 ACGATAAAGAGACGGATACTGGG 59.431 47.826 0.00 0.00 0.00 4.45
3293 5661 4.832590 ACGATAAAGAGACGGATACTGG 57.167 45.455 0.00 0.00 0.00 4.00
3294 5662 7.361127 ACAATACGATAAAGAGACGGATACTG 58.639 38.462 0.00 0.00 30.15 2.74
3295 5663 7.507733 ACAATACGATAAAGAGACGGATACT 57.492 36.000 0.00 0.00 30.15 2.12
3296 5664 7.859377 TGAACAATACGATAAAGAGACGGATAC 59.141 37.037 0.00 0.00 30.15 2.24
3297 5665 7.933396 TGAACAATACGATAAAGAGACGGATA 58.067 34.615 0.00 0.00 30.15 2.59
3298 5666 6.802608 TGAACAATACGATAAAGAGACGGAT 58.197 36.000 0.00 0.00 31.66 4.18
3299 5667 6.198650 TGAACAATACGATAAAGAGACGGA 57.801 37.500 0.00 0.00 0.00 4.69
3300 5668 5.051641 GCTGAACAATACGATAAAGAGACGG 60.052 44.000 0.00 0.00 0.00 4.79
3301 5669 5.330866 CGCTGAACAATACGATAAAGAGACG 60.331 44.000 0.00 0.00 0.00 4.18
3302 5670 5.515626 ACGCTGAACAATACGATAAAGAGAC 59.484 40.000 0.00 0.00 0.00 3.36
3303 5671 5.647589 ACGCTGAACAATACGATAAAGAGA 58.352 37.500 0.00 0.00 0.00 3.10
3304 5672 5.330866 CGACGCTGAACAATACGATAAAGAG 60.331 44.000 0.00 0.00 0.00 2.85
3305 5673 4.497966 CGACGCTGAACAATACGATAAAGA 59.502 41.667 0.00 0.00 0.00 2.52
3306 5674 4.264614 ACGACGCTGAACAATACGATAAAG 59.735 41.667 0.00 0.00 0.00 1.85
3307 5675 4.030865 CACGACGCTGAACAATACGATAAA 59.969 41.667 0.00 0.00 0.00 1.40
3308 5676 3.544682 CACGACGCTGAACAATACGATAA 59.455 43.478 0.00 0.00 0.00 1.75
3309 5677 3.103007 CACGACGCTGAACAATACGATA 58.897 45.455 0.00 0.00 0.00 2.92
3310 5678 1.917955 CACGACGCTGAACAATACGAT 59.082 47.619 0.00 0.00 0.00 3.73
3311 5679 1.069091 TCACGACGCTGAACAATACGA 60.069 47.619 0.00 0.00 0.00 3.43
3312 5680 1.317611 CTCACGACGCTGAACAATACG 59.682 52.381 0.00 0.00 0.00 3.06
3313 5681 1.654105 CCTCACGACGCTGAACAATAC 59.346 52.381 0.00 0.00 0.00 1.89
3314 5682 1.990799 CCTCACGACGCTGAACAATA 58.009 50.000 0.00 0.00 0.00 1.90
3315 5683 1.291877 GCCTCACGACGCTGAACAAT 61.292 55.000 0.00 0.00 0.00 2.71
3316 5684 1.954146 GCCTCACGACGCTGAACAA 60.954 57.895 0.00 0.00 0.00 2.83
3317 5685 2.355837 GCCTCACGACGCTGAACA 60.356 61.111 0.00 0.00 0.00 3.18
3318 5686 2.049063 AGCCTCACGACGCTGAAC 60.049 61.111 0.00 0.00 32.98 3.18
3319 5687 1.806461 AAGAGCCTCACGACGCTGAA 61.806 55.000 0.00 0.00 34.84 3.02
3320 5688 2.268802 AAGAGCCTCACGACGCTGA 61.269 57.895 0.00 0.00 34.84 4.26
3321 5689 2.091112 CAAGAGCCTCACGACGCTG 61.091 63.158 0.00 0.00 34.84 5.18
3322 5690 2.088674 AACAAGAGCCTCACGACGCT 62.089 55.000 0.00 0.00 38.27 5.07
3323 5691 1.664965 AACAAGAGCCTCACGACGC 60.665 57.895 0.00 0.00 0.00 5.19
3324 5692 1.891060 GCAACAAGAGCCTCACGACG 61.891 60.000 0.00 0.00 0.00 5.12
3325 5693 1.862806 GCAACAAGAGCCTCACGAC 59.137 57.895 0.00 0.00 0.00 4.34
3326 5694 4.361253 GCAACAAGAGCCTCACGA 57.639 55.556 0.00 0.00 0.00 4.35
3339 5707 0.168128 GACTGCATAACCGTGGCAAC 59.832 55.000 0.00 0.00 37.06 4.17
3340 5708 0.958382 GGACTGCATAACCGTGGCAA 60.958 55.000 0.00 0.00 37.06 4.52
3341 5709 1.376683 GGACTGCATAACCGTGGCA 60.377 57.895 0.00 0.00 35.96 4.92
3342 5710 0.748005 ATGGACTGCATAACCGTGGC 60.748 55.000 0.00 0.00 0.00 5.01
3343 5711 1.670811 GAATGGACTGCATAACCGTGG 59.329 52.381 0.00 0.00 0.00 4.94
3344 5712 1.670811 GGAATGGACTGCATAACCGTG 59.329 52.381 0.00 0.00 0.00 4.94
3345 5713 1.280710 TGGAATGGACTGCATAACCGT 59.719 47.619 0.00 0.00 0.00 4.83
3346 5714 1.670811 GTGGAATGGACTGCATAACCG 59.329 52.381 0.00 0.00 0.00 4.44
3347 5715 2.945668 GAGTGGAATGGACTGCATAACC 59.054 50.000 0.00 0.00 0.00 2.85
3348 5716 3.609853 TGAGTGGAATGGACTGCATAAC 58.390 45.455 0.00 0.00 0.00 1.89
3349 5717 3.998913 TGAGTGGAATGGACTGCATAA 57.001 42.857 0.00 0.00 0.00 1.90
3350 5718 3.008923 TGTTGAGTGGAATGGACTGCATA 59.991 43.478 0.00 0.00 0.00 3.14
3351 5719 2.224843 TGTTGAGTGGAATGGACTGCAT 60.225 45.455 0.00 0.00 0.00 3.96
3352 5720 1.142667 TGTTGAGTGGAATGGACTGCA 59.857 47.619 0.00 0.00 0.00 4.41
3353 5721 1.896220 TGTTGAGTGGAATGGACTGC 58.104 50.000 0.00 0.00 0.00 4.40
3354 5722 4.074259 TGAATGTTGAGTGGAATGGACTG 58.926 43.478 0.00 0.00 0.00 3.51
3355 5723 4.202503 ACTGAATGTTGAGTGGAATGGACT 60.203 41.667 0.00 0.00 0.00 3.85
3356 5724 4.074970 ACTGAATGTTGAGTGGAATGGAC 58.925 43.478 0.00 0.00 0.00 4.02
3357 5725 4.371624 ACTGAATGTTGAGTGGAATGGA 57.628 40.909 0.00 0.00 0.00 3.41
3358 5726 5.458041 AAACTGAATGTTGAGTGGAATGG 57.542 39.130 0.00 0.00 39.13 3.16
3359 5727 6.430925 TCCTAAACTGAATGTTGAGTGGAATG 59.569 38.462 0.00 0.00 39.13 2.67
3360 5728 6.542821 TCCTAAACTGAATGTTGAGTGGAAT 58.457 36.000 0.00 0.00 39.13 3.01
3361 5729 5.935945 TCCTAAACTGAATGTTGAGTGGAA 58.064 37.500 0.00 0.00 39.13 3.53
3362 5730 5.513094 CCTCCTAAACTGAATGTTGAGTGGA 60.513 44.000 0.00 0.00 39.13 4.02
3363 5731 4.697352 CCTCCTAAACTGAATGTTGAGTGG 59.303 45.833 0.00 0.00 39.13 4.00
3364 5732 4.697352 CCCTCCTAAACTGAATGTTGAGTG 59.303 45.833 0.00 0.00 39.13 3.51
3365 5733 4.351111 ACCCTCCTAAACTGAATGTTGAGT 59.649 41.667 0.00 0.00 39.13 3.41
3366 5734 4.697352 CACCCTCCTAAACTGAATGTTGAG 59.303 45.833 0.00 0.00 39.13 3.02
3367 5735 4.651778 CACCCTCCTAAACTGAATGTTGA 58.348 43.478 0.00 0.00 39.13 3.18
3368 5736 3.191371 GCACCCTCCTAAACTGAATGTTG 59.809 47.826 0.00 0.00 39.13 3.33
3369 5737 3.074538 AGCACCCTCCTAAACTGAATGTT 59.925 43.478 0.00 0.00 41.29 2.71
3370 5738 2.644798 AGCACCCTCCTAAACTGAATGT 59.355 45.455 0.00 0.00 0.00 2.71
3371 5739 3.274288 GAGCACCCTCCTAAACTGAATG 58.726 50.000 0.00 0.00 31.68 2.67
3372 5740 2.093447 CGAGCACCCTCCTAAACTGAAT 60.093 50.000 0.00 0.00 34.49 2.57
3373 5741 1.275291 CGAGCACCCTCCTAAACTGAA 59.725 52.381 0.00 0.00 34.49 3.02
3374 5742 0.895530 CGAGCACCCTCCTAAACTGA 59.104 55.000 0.00 0.00 34.49 3.41
3375 5743 0.608640 ACGAGCACCCTCCTAAACTG 59.391 55.000 0.00 0.00 34.49 3.16
3376 5744 0.608640 CACGAGCACCCTCCTAAACT 59.391 55.000 0.00 0.00 34.49 2.66
3377 5745 0.391263 CCACGAGCACCCTCCTAAAC 60.391 60.000 0.00 0.00 34.49 2.01
3378 5746 1.550130 CCCACGAGCACCCTCCTAAA 61.550 60.000 0.00 0.00 34.49 1.85
3379 5747 1.987855 CCCACGAGCACCCTCCTAA 60.988 63.158 0.00 0.00 34.49 2.69
3380 5748 2.363795 CCCACGAGCACCCTCCTA 60.364 66.667 0.00 0.00 34.49 2.94
3381 5749 4.640690 ACCCACGAGCACCCTCCT 62.641 66.667 0.00 0.00 34.49 3.69
3382 5750 4.394712 CACCCACGAGCACCCTCC 62.395 72.222 0.00 0.00 34.49 4.30
3383 5751 2.579684 GATCACCCACGAGCACCCTC 62.580 65.000 0.00 0.00 34.66 4.30
3384 5752 2.607750 ATCACCCACGAGCACCCT 60.608 61.111 0.00 0.00 0.00 4.34
3385 5753 2.125106 GATCACCCACGAGCACCC 60.125 66.667 0.00 0.00 0.00 4.61
3386 5754 2.298158 ATCGATCACCCACGAGCACC 62.298 60.000 0.00 0.00 41.63 5.01
3387 5755 1.141881 ATCGATCACCCACGAGCAC 59.858 57.895 0.00 0.00 41.63 4.40
3388 5756 1.141665 CATCGATCACCCACGAGCA 59.858 57.895 0.00 0.00 41.63 4.26
3389 5757 1.592669 CCATCGATCACCCACGAGC 60.593 63.158 0.00 0.00 41.63 5.03
3390 5758 1.068083 CCCATCGATCACCCACGAG 59.932 63.158 0.00 0.00 41.63 4.18
3391 5759 0.973496 TTCCCATCGATCACCCACGA 60.973 55.000 0.00 0.00 42.49 4.35
3392 5760 0.530650 CTTCCCATCGATCACCCACG 60.531 60.000 0.00 0.00 0.00 4.94
3393 5761 0.815615 GCTTCCCATCGATCACCCAC 60.816 60.000 0.00 0.00 0.00 4.61
3394 5762 1.271127 TGCTTCCCATCGATCACCCA 61.271 55.000 0.00 0.00 0.00 4.51
3395 5763 0.109342 ATGCTTCCCATCGATCACCC 59.891 55.000 0.00 0.00 0.00 4.61
3396 5764 1.233019 CATGCTTCCCATCGATCACC 58.767 55.000 0.00 0.00 29.71 4.02
3397 5765 1.233019 CCATGCTTCCCATCGATCAC 58.767 55.000 0.00 0.00 29.71 3.06
3398 5766 0.535780 GCCATGCTTCCCATCGATCA 60.536 55.000 0.00 0.00 29.71 2.92
3399 5767 0.250640 AGCCATGCTTCCCATCGATC 60.251 55.000 0.00 0.00 33.89 3.69
3400 5768 0.184451 AAGCCATGCTTCCCATCGAT 59.816 50.000 0.00 0.00 46.77 3.59
3401 5769 1.609239 AAGCCATGCTTCCCATCGA 59.391 52.632 0.00 0.00 46.77 3.59
3402 5770 4.247781 AAGCCATGCTTCCCATCG 57.752 55.556 0.00 0.00 46.77 3.84
3410 5778 0.543749 GGACTAGGTGAAGCCATGCT 59.456 55.000 0.00 0.00 42.56 3.79
3411 5779 0.811616 CGGACTAGGTGAAGCCATGC 60.812 60.000 0.00 0.00 40.61 4.06
3412 5780 0.537188 ACGGACTAGGTGAAGCCATG 59.463 55.000 0.00 0.00 40.61 3.66
3413 5781 2.032620 CTACGGACTAGGTGAAGCCAT 58.967 52.381 0.00 0.00 40.61 4.40
3414 5782 1.005097 TCTACGGACTAGGTGAAGCCA 59.995 52.381 0.00 0.00 40.61 4.75
3415 5783 1.404748 GTCTACGGACTAGGTGAAGCC 59.595 57.143 0.00 0.00 39.24 4.35
3416 5784 2.847959 GTCTACGGACTAGGTGAAGC 57.152 55.000 0.00 0.00 39.24 3.86
3426 5794 1.765230 ACCTCCATCAGTCTACGGAC 58.235 55.000 0.00 0.00 42.41 4.79
3427 5795 2.291346 TGAACCTCCATCAGTCTACGGA 60.291 50.000 0.00 0.00 0.00 4.69
3428 5796 2.099921 CTGAACCTCCATCAGTCTACGG 59.900 54.545 0.00 0.00 39.54 4.02
3429 5797 3.428746 CTGAACCTCCATCAGTCTACG 57.571 52.381 0.00 0.00 39.54 3.51
3444 5812 1.613520 GGGCTGAGGGGTTAACTGAAC 60.614 57.143 5.42 0.00 37.31 3.18
3445 5813 0.696501 GGGCTGAGGGGTTAACTGAA 59.303 55.000 5.42 0.00 0.00 3.02
3446 5814 1.550130 CGGGCTGAGGGGTTAACTGA 61.550 60.000 5.42 0.00 0.00 3.41
3447 5815 1.078426 CGGGCTGAGGGGTTAACTG 60.078 63.158 5.42 0.00 0.00 3.16
3448 5816 0.620700 ATCGGGCTGAGGGGTTAACT 60.621 55.000 5.42 0.00 0.00 2.24
3449 5817 1.125633 TATCGGGCTGAGGGGTTAAC 58.874 55.000 1.04 0.00 0.00 2.01
3450 5818 1.766496 CTTATCGGGCTGAGGGGTTAA 59.234 52.381 1.04 0.00 0.00 2.01
3451 5819 1.343681 ACTTATCGGGCTGAGGGGTTA 60.344 52.381 1.04 0.00 0.00 2.85
3452 5820 0.620700 ACTTATCGGGCTGAGGGGTT 60.621 55.000 1.04 0.00 0.00 4.11
3453 5821 0.620700 AACTTATCGGGCTGAGGGGT 60.621 55.000 1.04 0.00 0.00 4.95
3454 5822 0.179045 CAACTTATCGGGCTGAGGGG 60.179 60.000 1.04 0.00 0.00 4.79
3455 5823 0.541863 ACAACTTATCGGGCTGAGGG 59.458 55.000 1.04 0.00 0.00 4.30
3456 5824 1.066143 ACACAACTTATCGGGCTGAGG 60.066 52.381 1.04 0.00 0.00 3.86
3457 5825 2.386661 ACACAACTTATCGGGCTGAG 57.613 50.000 1.04 0.00 0.00 3.35
3458 5826 2.422597 CAACACAACTTATCGGGCTGA 58.577 47.619 0.00 0.00 0.00 4.26
3459 5827 1.468520 CCAACACAACTTATCGGGCTG 59.531 52.381 0.00 0.00 0.00 4.85
3460 5828 1.349688 TCCAACACAACTTATCGGGCT 59.650 47.619 0.00 0.00 0.00 5.19
3461 5829 1.816074 TCCAACACAACTTATCGGGC 58.184 50.000 0.00 0.00 0.00 6.13
3462 5830 2.161609 GCTTCCAACACAACTTATCGGG 59.838 50.000 0.00 0.00 0.00 5.14
3463 5831 3.074412 AGCTTCCAACACAACTTATCGG 58.926 45.455 0.00 0.00 0.00 4.18
3464 5832 4.749245 AAGCTTCCAACACAACTTATCG 57.251 40.909 0.00 0.00 0.00 2.92
3465 5833 6.803154 AGTAAGCTTCCAACACAACTTATC 57.197 37.500 0.00 0.00 0.00 1.75
3466 5834 7.676947 TCTAGTAAGCTTCCAACACAACTTAT 58.323 34.615 0.00 0.00 0.00 1.73
3467 5835 7.058023 TCTAGTAAGCTTCCAACACAACTTA 57.942 36.000 0.00 0.00 0.00 2.24
3468 5836 5.925509 TCTAGTAAGCTTCCAACACAACTT 58.074 37.500 0.00 0.00 0.00 2.66
3469 5837 5.546621 TCTAGTAAGCTTCCAACACAACT 57.453 39.130 0.00 0.19 0.00 3.16
3470 5838 6.091441 CAGATCTAGTAAGCTTCCAACACAAC 59.909 42.308 0.00 0.00 0.00 3.32
3471 5839 6.166279 CAGATCTAGTAAGCTTCCAACACAA 58.834 40.000 0.00 0.00 0.00 3.33
3472 5840 5.337571 CCAGATCTAGTAAGCTTCCAACACA 60.338 44.000 0.00 0.00 0.00 3.72
3473 5841 5.112686 CCAGATCTAGTAAGCTTCCAACAC 58.887 45.833 0.00 0.00 0.00 3.32
3474 5842 4.162320 CCCAGATCTAGTAAGCTTCCAACA 59.838 45.833 0.00 0.00 0.00 3.33
3475 5843 4.443598 CCCCAGATCTAGTAAGCTTCCAAC 60.444 50.000 0.00 0.00 0.00 3.77
3476 5844 3.711704 CCCCAGATCTAGTAAGCTTCCAA 59.288 47.826 0.00 0.00 0.00 3.53
3477 5845 3.052109 TCCCCAGATCTAGTAAGCTTCCA 60.052 47.826 0.00 0.00 0.00 3.53
3478 5846 3.576550 CTCCCCAGATCTAGTAAGCTTCC 59.423 52.174 0.00 0.00 0.00 3.46
3479 5847 4.219919 ACTCCCCAGATCTAGTAAGCTTC 58.780 47.826 0.00 0.00 0.00 3.86
3480 5848 4.273300 ACTCCCCAGATCTAGTAAGCTT 57.727 45.455 3.48 3.48 0.00 3.74
3481 5849 3.983533 ACTCCCCAGATCTAGTAAGCT 57.016 47.619 0.00 0.00 0.00 3.74
3482 5850 3.961408 TGAACTCCCCAGATCTAGTAAGC 59.039 47.826 0.00 0.00 0.00 3.09
3483 5851 4.036971 CGTGAACTCCCCAGATCTAGTAAG 59.963 50.000 0.00 0.00 0.00 2.34
3484 5852 3.952323 CGTGAACTCCCCAGATCTAGTAA 59.048 47.826 0.00 0.00 0.00 2.24
3485 5853 3.552875 CGTGAACTCCCCAGATCTAGTA 58.447 50.000 0.00 0.00 0.00 1.82
3486 5854 2.379972 CGTGAACTCCCCAGATCTAGT 58.620 52.381 0.00 0.00 0.00 2.57
3487 5855 1.683917 CCGTGAACTCCCCAGATCTAG 59.316 57.143 0.00 0.00 0.00 2.43
3488 5856 1.006758 ACCGTGAACTCCCCAGATCTA 59.993 52.381 0.00 0.00 0.00 1.98
3489 5857 0.252284 ACCGTGAACTCCCCAGATCT 60.252 55.000 0.00 0.00 0.00 2.75
3490 5858 0.613777 AACCGTGAACTCCCCAGATC 59.386 55.000 0.00 0.00 0.00 2.75
3491 5859 1.946984 TAACCGTGAACTCCCCAGAT 58.053 50.000 0.00 0.00 0.00 2.90
3492 5860 1.719529 TTAACCGTGAACTCCCCAGA 58.280 50.000 0.00 0.00 0.00 3.86
3493 5861 2.554370 TTTAACCGTGAACTCCCCAG 57.446 50.000 0.00 0.00 0.00 4.45
3494 5862 2.613474 CGATTTAACCGTGAACTCCCCA 60.613 50.000 0.00 0.00 0.00 4.96
3495 5863 2.004733 CGATTTAACCGTGAACTCCCC 58.995 52.381 0.00 0.00 0.00 4.81
3496 5864 2.963432 TCGATTTAACCGTGAACTCCC 58.037 47.619 0.00 0.00 0.00 4.30
3497 5865 3.930848 ACATCGATTTAACCGTGAACTCC 59.069 43.478 0.00 0.00 0.00 3.85
3498 5866 6.823678 ATACATCGATTTAACCGTGAACTC 57.176 37.500 0.00 0.00 0.00 3.01
3499 5867 8.761497 CAATATACATCGATTTAACCGTGAACT 58.239 33.333 0.00 0.00 0.00 3.01
3500 5868 8.757789 TCAATATACATCGATTTAACCGTGAAC 58.242 33.333 0.00 0.00 0.00 3.18
3501 5869 8.874744 TCAATATACATCGATTTAACCGTGAA 57.125 30.769 0.00 0.00 0.00 3.18
3524 5892 9.764363 GGAATCACACTAGTGTTAATGATATCA 57.236 33.333 25.89 8.10 46.01 2.15
3525 5893 9.988815 AGGAATCACACTAGTGTTAATGATATC 57.011 33.333 25.89 19.92 46.01 1.63
3528 5896 8.982723 ACTAGGAATCACACTAGTGTTAATGAT 58.017 33.333 25.89 20.61 45.91 2.45
3529 5897 8.362464 ACTAGGAATCACACTAGTGTTAATGA 57.638 34.615 25.89 19.33 45.91 2.57
3530 5898 9.088512 GAACTAGGAATCACACTAGTGTTAATG 57.911 37.037 25.89 14.65 46.70 1.90
3531 5899 8.258708 GGAACTAGGAATCACACTAGTGTTAAT 58.741 37.037 25.89 18.38 46.70 1.40
3532 5900 7.233962 TGGAACTAGGAATCACACTAGTGTTAA 59.766 37.037 25.89 16.94 46.70 2.01
3533 5901 6.722590 TGGAACTAGGAATCACACTAGTGTTA 59.277 38.462 25.89 18.84 46.70 2.41
3534 5902 5.542635 TGGAACTAGGAATCACACTAGTGTT 59.457 40.000 25.89 12.18 46.70 3.32
3535 5903 5.084519 TGGAACTAGGAATCACACTAGTGT 58.915 41.667 22.95 22.95 46.70 3.55
3536 5904 5.661056 TGGAACTAGGAATCACACTAGTG 57.339 43.478 21.44 21.44 46.70 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.