AutoCloner

Multiple sequence alignment - TraesCS2B01G209200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2B01G209200	chr2B	100.000	5179	0	0	1	5179	190967689	190972867	0.000000e+00	9564.0
1	TraesCS2B01G209200	chr2D	89.100	2743	132	65	697	3347	134463736	134466403	0.000000e+00	3254.0
2	TraesCS2B01G209200	chr2D	93.419	699	40	6	3823	4519	134473799	134474493	0.000000e+00	1031.0
3	TraesCS2B01G209200	chr2D	90.729	658	49	10	4504	5153	134474512	134475165	0.000000e+00	867.0
4	TraesCS2B01G209200	chr2D	85.405	370	40	7	3471	3831	134473390	134473754	6.330000e-99	372.0
5	TraesCS2B01G209200	chr2D	85.806	155	19	3	528	680	582032291	582032138	1.490000e-35	161.0
6	TraesCS2B01G209200	chr2D	84.967	153	21	2	530	680	615992121	615991969	2.500000e-33	154.0
7	TraesCS2B01G209200	chr2A	92.578	1563	70	15	1795	3348	142314394	142315919	0.000000e+00	2202.0
8	TraesCS2B01G209200	chr2A	89.704	1350	109	16	3701	5033	142316186	142317522	0.000000e+00	1696.0
9	TraesCS2B01G209200	chr2A	87.414	1017	50	26	814	1774	142307950	142308944	0.000000e+00	1098.0
10	TraesCS2B01G209200	chr2A	81.761	318	29	22	3359	3671	142315898	142316191	6.700000e-59	239.0
11	TraesCS2B01G209200	chr2A	90.419	167	16	0	1	167	121230849	121230683	2.430000e-53	220.0
12	TraesCS2B01G209200	chr5D	84.569	499	64	8	1	489	12324641	12325136	2.800000e-132	483.0
13	TraesCS2B01G209200	chr5D	85.621	153	20	2	530	680	352818839	352818991	5.370000e-35	159.0
14	TraesCS2B01G209200	chr5D	82.692	156	25	2	527	680	446687021	446686866	2.520000e-28	137.0
15	TraesCS2B01G209200	chr7D	77.030	431	82	15	4	425	469217200	469216778	1.120000e-56	231.0
16	TraesCS2B01G209200	chr7D	87.342	158	18	2	525	680	70816574	70816731	4.120000e-41	180.0
17	TraesCS2B01G209200	chr3B	82.969	229	35	3	1	225	640346992	640347220	2.440000e-48	204.0
18	TraesCS2B01G209200	chr3B	83.537	164	24	3	520	680	536882794	536882957	3.230000e-32	150.0
19	TraesCS2B01G209200	chr3B	97.959	49	1	0	2	50	416530345	416530393	9.240000e-13	86.1
20	TraesCS2B01G209200	chr7B	85.350	157	21	2	526	680	540779956	540779800	1.490000e-35	161.0
21	TraesCS2B01G209200	chr1D	84.416	154	22	2	529	680	479039247	479039094	3.230000e-32	150.0
22	TraesCS2B01G209200	chr5B	85.211	142	20	1	540	680	425615768	425615909	1.500000e-30	145.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2B01G209200	chr2B	190967689	190972867	5178	False	9564.000000	9564	100.000000	1	5179	1	chr2B.!!$F1	5178
1	TraesCS2B01G209200	chr2D	134463736	134466403	2667	False	3254.000000	3254	89.100000	697	3347	1	chr2D.!!$F1	2650
2	TraesCS2B01G209200	chr2D	134473390	134475165	1775	False	756.666667	1031	89.851000	3471	5153	3	chr2D.!!$F2	1682
3	TraesCS2B01G209200	chr2A	142314394	142317522	3128	False	1379.000000	2202	88.014333	1795	5033	3	chr2A.!!$F2	3238
4	TraesCS2B01G209200	chr2A	142307950	142308944	994	False	1098.000000	1098	87.414000	814	1774	1	chr2A.!!$F1	960

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
294	295	0.033228	GACGATGGATCTGAGCTGGG	59.967	60.0	0.00	0.00	4.45	F
676	677	0.037790	TGCACTTAAATTTGCGCCCC	60.038	50.0	4.18	41.96	5.80	F
721	722	0.320073	CGGTCTGTTGGTTCGGCTTA	60.320	55.0	0.00	0.00	3.09	F
1843	1957	0.179000	AGCGTTAAGGAGCCTGATGG	59.821	55.0	0.00	0.00	3.51	F
1851	1965	0.332972	GGAGCCTGATGGTTTCCCTT	59.667	55.0	0.00	34.95	3.95	F
3192	3320	0.623723	TCACCCAAGGTAAGCCCATC	59.376	55.0	0.00	32.11	3.51	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1789	1874	0.170339	GAAGGTGCCACCATTAACGC	59.830	55.0	17.80	0.00	41.95	4.84	R
1790	1875	0.446222	CGAAGGTGCCACCATTAACG	59.554	55.0	17.80	9.83	41.95	3.18	R
1871	1985	0.613012	AGGAATCAAGGGCAAGCACC	60.613	55.0	0.00	0.00	0.00	5.01	R
3379	3507	0.764271	TGAGCCATGTGGAGTTGTCA	59.236	50.0	2.55	0.00	37.39	3.58	R
3410	3538	0.881118	GACAAATGTCCCATGCGTGT	59.119	50.0	4.96	0.00	39.07	4.49	R
4723	4956	0.316689	GGCAACAGTTTTCGTGGACG	60.317	55.0	0.00	0.00	41.45	4.79	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
23	24	2.887568	GCACTCCGCCGAGATGTG	60.888	66.667	9.16	0.00	38.52	3.21
24	25	2.202797	CACTCCGCCGAGATGTGG	60.203	66.667	9.16	0.00	38.52	4.17
37	38	0.672342	GATGTGGCCATCATCCTTGC	59.328	55.000	25.71	7.06	45.68	4.01
38	39	0.757935	ATGTGGCCATCATCCTTGCC	60.758	55.000	9.72	0.00	44.27	4.52
40	41	3.530067	GGCCATCATCCTTGCCAC	58.470	61.111	0.00	0.00	43.46	5.01
41	42	1.380246	GGCCATCATCCTTGCCACA	60.380	57.895	0.00	0.00	43.46	4.17
42	43	1.389609	GGCCATCATCCTTGCCACAG	61.390	60.000	0.00	0.00	43.46	3.66
43	44	0.682209	GCCATCATCCTTGCCACAGT	60.682	55.000	0.00	0.00	0.00	3.55
44	45	1.843368	CCATCATCCTTGCCACAGTT	58.157	50.000	0.00	0.00	0.00	3.16
45	46	1.475280	CCATCATCCTTGCCACAGTTG	59.525	52.381	0.00	0.00	0.00	3.16
46	47	2.165167	CATCATCCTTGCCACAGTTGT	58.835	47.619	0.00	0.00	0.00	3.32
47	48	3.346315	CATCATCCTTGCCACAGTTGTA	58.654	45.455	0.00	0.00	0.00	2.41
48	49	3.057969	TCATCCTTGCCACAGTTGTAG	57.942	47.619	0.00	0.00	0.00	2.74
49	50	1.470098	CATCCTTGCCACAGTTGTAGC	59.530	52.381	0.00	0.00	33.28	3.58
50	51	0.472044	TCCTTGCCACAGTTGTAGCA	59.528	50.000	1.23	1.23	40.68	3.49
51	52	0.877071	CCTTGCCACAGTTGTAGCAG	59.123	55.000	5.58	1.68	43.00	4.24
52	53	0.239347	CTTGCCACAGTTGTAGCAGC	59.761	55.000	5.58	0.00	43.00	5.25
53	54	0.465278	TTGCCACAGTTGTAGCAGCA	60.465	50.000	5.58	1.02	43.00	4.41
54	55	0.886043	TGCCACAGTTGTAGCAGCAG	60.886	55.000	1.23	0.00	37.73	4.24
55	56	1.871772	CCACAGTTGTAGCAGCAGC	59.128	57.895	0.00	0.00	42.56	5.25
56	57	1.580845	CCACAGTTGTAGCAGCAGCC	61.581	60.000	0.00	0.00	43.56	4.85
57	58	0.886043	CACAGTTGTAGCAGCAGCCA	60.886	55.000	0.00	0.00	43.56	4.75
58	59	0.179020	ACAGTTGTAGCAGCAGCCAA	60.179	50.000	0.00	0.00	43.56	4.52
59	60	0.953727	CAGTTGTAGCAGCAGCCAAA	59.046	50.000	0.00	0.00	43.56	3.28
60	61	1.337703	CAGTTGTAGCAGCAGCCAAAA	59.662	47.619	0.00	0.00	43.56	2.44
61	62	2.031120	AGTTGTAGCAGCAGCCAAAAA	58.969	42.857	0.00	0.00	43.56	1.94
62	63	2.035066	AGTTGTAGCAGCAGCCAAAAAG	59.965	45.455	0.00	0.00	43.56	2.27
63	64	0.314935	TGTAGCAGCAGCCAAAAAGC	59.685	50.000	0.00	0.00	43.56	3.51
64	65	0.600057	GTAGCAGCAGCCAAAAAGCT	59.400	50.000	0.00	0.00	46.45	3.74
65	66	0.883833	TAGCAGCAGCCAAAAAGCTC	59.116	50.000	0.00	0.00	42.61	4.09
66	67	1.373873	GCAGCAGCCAAAAAGCTCC	60.374	57.895	0.00	0.00	42.61	4.70
67	68	1.080974	CAGCAGCCAAAAAGCTCCG	60.081	57.895	0.00	0.00	42.61	4.63
68	69	2.431430	GCAGCCAAAAAGCTCCGC	60.431	61.111	0.00	0.00	42.61	5.54
69	70	2.259511	CAGCCAAAAAGCTCCGCC	59.740	61.111	0.00	0.00	42.61	6.13
70	71	3.365265	AGCCAAAAAGCTCCGCCG	61.365	61.111	0.00	0.00	39.48	6.46
71	72	4.419939	GCCAAAAAGCTCCGCCGG	62.420	66.667	0.00	0.00	0.00	6.13
72	73	4.419939	CCAAAAAGCTCCGCCGGC	62.420	66.667	19.07	19.07	0.00	6.13
73	74	3.669344	CAAAAAGCTCCGCCGGCA	61.669	61.111	28.98	6.80	0.00	5.69
74	75	2.676471	AAAAAGCTCCGCCGGCAT	60.676	55.556	28.98	2.90	0.00	4.40
75	76	2.700773	AAAAAGCTCCGCCGGCATC	61.701	57.895	28.98	11.69	0.00	3.91
83	84	4.899239	CGCCGGCATCCTGGACTC	62.899	72.222	28.98	0.00	0.00	3.36
84	85	4.554036	GCCGGCATCCTGGACTCC	62.554	72.222	24.80	1.95	0.00	3.85
85	86	4.227134	CCGGCATCCTGGACTCCG	62.227	72.222	23.77	23.77	39.79	4.63
86	87	4.227134	CGGCATCCTGGACTCCGG	62.227	72.222	23.27	0.00	36.73	5.14
87	88	4.554036	GGCATCCTGGACTCCGGC	62.554	72.222	0.00	0.00	0.00	6.13
88	89	4.899239	GCATCCTGGACTCCGGCG	62.899	72.222	0.00	0.00	0.00	6.46
89	90	4.227134	CATCCTGGACTCCGGCGG	62.227	72.222	22.51	22.51	0.00	6.13
123	124	3.425713	AACACGCGCTGAGCATGG	61.426	61.111	5.73	0.00	44.39	3.66
142	143	4.785453	GGCGCCTCTGTGGGAAGG	62.785	72.222	22.15	0.00	36.00	3.46
145	146	2.045536	GCCTCTGTGGGAAGGCAG	60.046	66.667	8.47	0.00	45.99	4.85
146	147	2.673523	CCTCTGTGGGAAGGCAGG	59.326	66.667	0.00	0.00	33.81	4.85
147	148	2.673523	CTCTGTGGGAAGGCAGGG	59.326	66.667	0.00	0.00	33.81	4.45
148	149	3.635268	CTCTGTGGGAAGGCAGGGC	62.635	68.421	0.00	0.00	33.81	5.19
151	152	4.785453	GTGGGAAGGCAGGGCGAG	62.785	72.222	0.00	0.00	0.00	5.03
184	185	4.008933	GCCGGCGGCTCCTATCAT	62.009	66.667	41.44	0.00	46.69	2.45
185	186	2.262915	CCGGCGGCTCCTATCATC	59.737	66.667	15.42	0.00	0.00	2.92
186	187	2.262915	CGGCGGCTCCTATCATCC	59.737	66.667	7.61	0.00	0.00	3.51
187	188	2.574018	CGGCGGCTCCTATCATCCA	61.574	63.158	7.61	0.00	0.00	3.41
188	189	1.754745	GGCGGCTCCTATCATCCAA	59.245	57.895	0.00	0.00	0.00	3.53
189	190	0.108585	GGCGGCTCCTATCATCCAAA	59.891	55.000	0.00	0.00	0.00	3.28
190	191	1.230324	GCGGCTCCTATCATCCAAAC	58.770	55.000	0.00	0.00	0.00	2.93
191	192	1.884235	CGGCTCCTATCATCCAAACC	58.116	55.000	0.00	0.00	0.00	3.27
192	193	1.873903	CGGCTCCTATCATCCAAACCG	60.874	57.143	0.00	0.00	0.00	4.44
193	194	1.230324	GCTCCTATCATCCAAACCGC	58.770	55.000	0.00	0.00	0.00	5.68
194	195	1.884235	CTCCTATCATCCAAACCGCC	58.116	55.000	0.00	0.00	0.00	6.13
195	196	1.417890	CTCCTATCATCCAAACCGCCT	59.582	52.381	0.00	0.00	0.00	5.52
196	197	1.416401	TCCTATCATCCAAACCGCCTC	59.584	52.381	0.00	0.00	0.00	4.70
197	198	1.543429	CCTATCATCCAAACCGCCTCC	60.543	57.143	0.00	0.00	0.00	4.30
198	199	1.140852	CTATCATCCAAACCGCCTCCA	59.859	52.381	0.00	0.00	0.00	3.86
199	200	0.394352	ATCATCCAAACCGCCTCCAC	60.394	55.000	0.00	0.00	0.00	4.02
200	201	2.046285	CATCCAAACCGCCTCCACC	61.046	63.158	0.00	0.00	0.00	4.61
201	202	2.231380	ATCCAAACCGCCTCCACCT	61.231	57.895	0.00	0.00	0.00	4.00
202	203	2.484287	ATCCAAACCGCCTCCACCTG	62.484	60.000	0.00	0.00	0.00	4.00
203	204	2.672996	CAAACCGCCTCCACCTGG	60.673	66.667	0.00	0.00	0.00	4.45
204	205	3.966543	AAACCGCCTCCACCTGGG	61.967	66.667	0.00	0.00	35.41	4.45
217	218	0.995024	ACCTGGGGTGAATGAGAAGG	59.005	55.000	0.00	0.00	32.98	3.46
218	219	1.289160	CCTGGGGTGAATGAGAAGGA	58.711	55.000	0.00	0.00	0.00	3.36
219	220	1.065126	CCTGGGGTGAATGAGAAGGAC	60.065	57.143	0.00	0.00	0.00	3.85
220	221	0.991920	TGGGGTGAATGAGAAGGACC	59.008	55.000	0.00	0.00	0.00	4.46
221	222	1.290134	GGGGTGAATGAGAAGGACCT	58.710	55.000	0.00	0.00	0.00	3.85
222	223	1.065126	GGGGTGAATGAGAAGGACCTG	60.065	57.143	0.00	0.00	0.00	4.00
223	224	1.680249	GGGTGAATGAGAAGGACCTGC	60.680	57.143	0.00	0.00	0.00	4.85
224	225	1.003580	GGTGAATGAGAAGGACCTGCA	59.996	52.381	1.14	0.00	0.00	4.41
225	226	2.354259	GTGAATGAGAAGGACCTGCAG	58.646	52.381	6.78	6.78	0.00	4.41
226	227	1.339438	TGAATGAGAAGGACCTGCAGC	60.339	52.381	8.66	0.00	0.00	5.25
227	228	0.034670	AATGAGAAGGACCTGCAGCC	60.035	55.000	8.66	5.06	0.00	4.85
228	229	1.919600	ATGAGAAGGACCTGCAGCCC	61.920	60.000	8.66	11.72	0.00	5.19
229	230	3.334054	AGAAGGACCTGCAGCCCC	61.334	66.667	8.66	11.33	0.00	5.80
230	231	4.785453	GAAGGACCTGCAGCCCCG	62.785	72.222	8.66	0.00	0.00	5.73
250	251	3.691342	CTGGACCAGCGGACCGAA	61.691	66.667	20.50	0.00	40.28	4.30
251	252	3.649277	CTGGACCAGCGGACCGAAG	62.649	68.421	20.50	8.66	40.28	3.79
276	277	4.953868	CCACAACCGGCGTCACGA	62.954	66.667	0.00	0.00	35.47	4.35
277	278	3.698463	CACAACCGGCGTCACGAC	61.698	66.667	0.00	0.00	35.47	4.34
289	290	2.112475	GTCACGACGATGGATCTGAG	57.888	55.000	0.00	0.00	0.00	3.35
290	291	0.382158	TCACGACGATGGATCTGAGC	59.618	55.000	0.00	0.00	0.00	4.26
291	292	0.383590	CACGACGATGGATCTGAGCT	59.616	55.000	0.00	0.00	0.00	4.09
292	293	0.383590	ACGACGATGGATCTGAGCTG	59.616	55.000	0.00	0.00	0.00	4.24
293	294	0.318529	CGACGATGGATCTGAGCTGG	60.319	60.000	0.00	0.00	0.00	4.85
294	295	0.033228	GACGATGGATCTGAGCTGGG	59.967	60.000	0.00	0.00	0.00	4.45
295	296	1.370437	CGATGGATCTGAGCTGGGG	59.630	63.158	0.00	0.00	0.00	4.96
296	297	1.759881	GATGGATCTGAGCTGGGGG	59.240	63.158	0.00	0.00	0.00	5.40
297	298	2.408880	GATGGATCTGAGCTGGGGGC	62.409	65.000	0.00	0.00	42.19	5.80
325	326	4.479993	GCAGGACGGGCAGAGCAT	62.480	66.667	0.00	0.00	0.00	3.79
326	327	2.513204	CAGGACGGGCAGAGCATG	60.513	66.667	0.00	0.00	0.00	4.06
335	336	4.105727	CAGAGCATGCTCCAGACG	57.894	61.111	37.79	20.58	43.70	4.18
336	337	2.172372	CAGAGCATGCTCCAGACGC	61.172	63.158	37.79	17.12	43.70	5.19
337	338	3.260483	GAGCATGCTCCAGACGCG	61.260	66.667	33.31	3.53	37.11	6.01
338	339	4.827087	AGCATGCTCCAGACGCGG	62.827	66.667	16.30	0.00	0.00	6.46
356	357	4.570663	CGCCGGCGAGGAAGTAGG	62.571	72.222	44.86	10.04	45.00	3.18
357	358	4.222847	GCCGGCGAGGAAGTAGGG	62.223	72.222	12.58	0.00	45.00	3.53
358	359	3.537874	CCGGCGAGGAAGTAGGGG	61.538	72.222	9.30	0.00	45.00	4.79
359	360	2.441532	CGGCGAGGAAGTAGGGGA	60.442	66.667	0.00	0.00	0.00	4.81
360	361	2.491022	CGGCGAGGAAGTAGGGGAG	61.491	68.421	0.00	0.00	0.00	4.30
361	362	2.134933	GGCGAGGAAGTAGGGGAGG	61.135	68.421	0.00	0.00	0.00	4.30
362	363	1.076192	GCGAGGAAGTAGGGGAGGA	60.076	63.158	0.00	0.00	0.00	3.71
363	364	0.686769	GCGAGGAAGTAGGGGAGGAA	60.687	60.000	0.00	0.00	0.00	3.36
364	365	1.861982	CGAGGAAGTAGGGGAGGAAA	58.138	55.000	0.00	0.00	0.00	3.13
365	366	1.757699	CGAGGAAGTAGGGGAGGAAAG	59.242	57.143	0.00	0.00	0.00	2.62
366	367	1.487142	GAGGAAGTAGGGGAGGAAAGC	59.513	57.143	0.00	0.00	0.00	3.51
367	368	1.081343	AGGAAGTAGGGGAGGAAAGCT	59.919	52.381	0.00	0.00	0.00	3.74
368	369	1.487142	GGAAGTAGGGGAGGAAAGCTC	59.513	57.143	0.00	0.00	0.00	4.09
369	370	1.487142	GAAGTAGGGGAGGAAAGCTCC	59.513	57.143	0.00	0.00	42.81	4.70
384	385	3.209812	TCCGACGAGGATGAGCCG	61.210	66.667	0.00	0.00	45.98	5.52
385	386	4.271816	CCGACGAGGATGAGCCGG	62.272	72.222	0.00	0.00	45.00	6.13
386	387	3.209812	CGACGAGGATGAGCCGGA	61.210	66.667	5.05	0.00	43.43	5.14
387	388	2.413765	GACGAGGATGAGCCGGAC	59.586	66.667	5.05	0.00	43.43	4.79
388	389	2.362503	ACGAGGATGAGCCGGACA	60.363	61.111	5.05	4.62	43.43	4.02
389	390	2.343163	GACGAGGATGAGCCGGACAG	62.343	65.000	5.05	0.00	43.43	3.51
390	391	2.121538	CGAGGATGAGCCGGACAGA	61.122	63.158	5.05	0.00	43.43	3.41
391	392	1.739049	GAGGATGAGCCGGACAGAG	59.261	63.158	5.05	0.00	43.43	3.35
392	393	0.753479	GAGGATGAGCCGGACAGAGA	60.753	60.000	5.05	0.00	43.43	3.10
393	394	0.324738	AGGATGAGCCGGACAGAGAA	60.325	55.000	5.05	0.00	43.43	2.87
394	395	0.537188	GGATGAGCCGGACAGAGAAA	59.463	55.000	5.05	0.00	0.00	2.52
395	396	1.646189	GATGAGCCGGACAGAGAAAC	58.354	55.000	5.05	0.00	0.00	2.78
396	397	0.250513	ATGAGCCGGACAGAGAAACC	59.749	55.000	5.05	0.00	0.00	3.27
397	398	1.079057	GAGCCGGACAGAGAAACCC	60.079	63.158	5.05	0.00	0.00	4.11
398	399	2.434359	GCCGGACAGAGAAACCCG	60.434	66.667	5.05	0.00	41.47	5.28
399	400	2.434359	CCGGACAGAGAAACCCGC	60.434	66.667	0.00	0.00	40.56	6.13
400	401	2.809601	CGGACAGAGAAACCCGCG	60.810	66.667	0.00	0.00	35.29	6.46
401	402	2.654877	GGACAGAGAAACCCGCGA	59.345	61.111	8.23	0.00	0.00	5.87
402	403	1.005394	GGACAGAGAAACCCGCGAA	60.005	57.895	8.23	0.00	0.00	4.70
403	404	1.014564	GGACAGAGAAACCCGCGAAG	61.015	60.000	8.23	0.00	0.00	3.79
501	502	4.329545	GCCGGCTGTGTGGGAGAA	62.330	66.667	22.15	0.00	0.00	2.87
502	503	2.429930	CCGGCTGTGTGGGAGAAA	59.570	61.111	0.00	0.00	0.00	2.52
503	504	1.672356	CCGGCTGTGTGGGAGAAAG	60.672	63.158	0.00	0.00	0.00	2.62
504	505	2.328099	CGGCTGTGTGGGAGAAAGC	61.328	63.158	0.00	0.00	0.00	3.51
505	506	1.228245	GGCTGTGTGGGAGAAAGCA	60.228	57.895	0.00	0.00	35.55	3.91
506	507	1.518903	GGCTGTGTGGGAGAAAGCAC	61.519	60.000	0.00	0.00	35.55	4.40
507	508	0.536006	GCTGTGTGGGAGAAAGCACT	60.536	55.000	0.00	0.00	34.01	4.40
508	509	1.233019	CTGTGTGGGAGAAAGCACTG	58.767	55.000	0.00	0.00	33.44	3.66
509	510	0.819259	TGTGTGGGAGAAAGCACTGC	60.819	55.000	0.00	0.00	33.44	4.40
510	511	1.597854	TGTGGGAGAAAGCACTGCG	60.598	57.895	0.00	0.00	0.00	5.18
511	512	1.598130	GTGGGAGAAAGCACTGCGT	60.598	57.895	0.00	0.00	0.00	5.24
512	513	0.320421	GTGGGAGAAAGCACTGCGTA	60.320	55.000	0.00	0.00	0.00	4.42
513	514	0.394938	TGGGAGAAAGCACTGCGTAA	59.605	50.000	0.00	0.00	0.00	3.18
514	515	1.202710	TGGGAGAAAGCACTGCGTAAA	60.203	47.619	0.00	0.00	0.00	2.01
515	516	1.877443	GGGAGAAAGCACTGCGTAAAA	59.123	47.619	0.00	0.00	0.00	1.52
516	517	2.488153	GGGAGAAAGCACTGCGTAAAAT	59.512	45.455	0.00	0.00	0.00	1.82
517	518	3.687698	GGGAGAAAGCACTGCGTAAAATA	59.312	43.478	0.00	0.00	0.00	1.40
518	519	4.436986	GGGAGAAAGCACTGCGTAAAATAC	60.437	45.833	0.00	0.00	0.00	1.89
519	520	4.392138	GGAGAAAGCACTGCGTAAAATACT	59.608	41.667	0.00	0.00	0.00	2.12
520	521	5.106673	GGAGAAAGCACTGCGTAAAATACTT	60.107	40.000	0.00	0.00	0.00	2.24
521	522	5.689819	AGAAAGCACTGCGTAAAATACTTG	58.310	37.500	0.00	0.00	0.00	3.16
522	523	5.468746	AGAAAGCACTGCGTAAAATACTTGA	59.531	36.000	0.00	0.00	0.00	3.02
523	524	5.682943	AAGCACTGCGTAAAATACTTGAA	57.317	34.783	0.00	0.00	0.00	2.69
524	525	5.030874	AGCACTGCGTAAAATACTTGAAC	57.969	39.130	0.00	0.00	0.00	3.18
525	526	4.755123	AGCACTGCGTAAAATACTTGAACT	59.245	37.500	0.00	0.00	0.00	3.01
526	527	5.929992	AGCACTGCGTAAAATACTTGAACTA	59.070	36.000	0.00	0.00	0.00	2.24
527	528	6.594159	AGCACTGCGTAAAATACTTGAACTAT	59.406	34.615	0.00	0.00	0.00	2.12
528	529	7.762615	AGCACTGCGTAAAATACTTGAACTATA	59.237	33.333	0.00	0.00	0.00	1.31
529	530	8.385111	GCACTGCGTAAAATACTTGAACTATAA	58.615	33.333	0.00	0.00	0.00	0.98
530	531	9.901724	CACTGCGTAAAATACTTGAACTATAAG	57.098	33.333	0.00	0.00	0.00	1.73
531	532	9.865321	ACTGCGTAAAATACTTGAACTATAAGA	57.135	29.630	0.00	0.00	0.00	2.10
533	534	8.814235	TGCGTAAAATACTTGAACTATAAGAGC	58.186	33.333	0.00	0.00	0.00	4.09
534	535	8.814235	GCGTAAAATACTTGAACTATAAGAGCA	58.186	33.333	0.00	0.00	0.00	4.26
539	540	8.950208	AATACTTGAACTATAAGAGCAACTCC	57.050	34.615	0.00	0.00	0.00	3.85
540	541	6.360370	ACTTGAACTATAAGAGCAACTCCA	57.640	37.500	0.00	0.00	0.00	3.86
541	542	6.769512	ACTTGAACTATAAGAGCAACTCCAA	58.230	36.000	0.00	0.00	0.00	3.53
542	543	7.398024	ACTTGAACTATAAGAGCAACTCCAAT	58.602	34.615	0.00	0.00	0.00	3.16
543	544	7.335422	ACTTGAACTATAAGAGCAACTCCAATG	59.665	37.037	0.00	0.00	0.00	2.82
544	545	6.115446	TGAACTATAAGAGCAACTCCAATGG	58.885	40.000	0.00	0.00	0.00	3.16
545	546	5.957771	ACTATAAGAGCAACTCCAATGGA	57.042	39.130	0.48	0.48	0.00	3.41
560	561	3.362581	TGGAGCGATCCATTTCGTC	57.637	52.632	20.59	0.00	41.16	4.20
561	562	0.824109	TGGAGCGATCCATTTCGTCT	59.176	50.000	20.59	0.00	41.16	4.18
562	563	1.212616	GGAGCGATCCATTTCGTCTG	58.787	55.000	16.44	0.00	41.16	3.51
563	564	0.579156	GAGCGATCCATTTCGTCTGC	59.421	55.000	0.00	0.00	41.16	4.26
564	565	0.811616	AGCGATCCATTTCGTCTGCC	60.812	55.000	0.00	0.00	41.16	4.85
565	566	1.927210	CGATCCATTTCGTCTGCCG	59.073	57.895	0.00	0.00	34.46	5.69
566	567	1.643832	GATCCATTTCGTCTGCCGC	59.356	57.895	0.00	0.00	36.19	6.53
567	568	0.811616	GATCCATTTCGTCTGCCGCT	60.812	55.000	0.00	0.00	36.19	5.52
568	569	1.091771	ATCCATTTCGTCTGCCGCTG	61.092	55.000	0.00	0.00	36.19	5.18
569	570	2.034879	CCATTTCGTCTGCCGCTGT	61.035	57.895	0.00	0.00	36.19	4.40
570	571	1.577328	CCATTTCGTCTGCCGCTGTT	61.577	55.000	0.00	0.00	36.19	3.16
571	572	0.179215	CATTTCGTCTGCCGCTGTTC	60.179	55.000	0.00	0.00	36.19	3.18
572	573	1.626654	ATTTCGTCTGCCGCTGTTCG	61.627	55.000	0.00	2.08	36.19	3.95
573	574	2.964438	TTTCGTCTGCCGCTGTTCGT	62.964	55.000	13.30	0.00	36.19	3.85
574	575	2.964438	TTCGTCTGCCGCTGTTCGTT	62.964	55.000	13.30	0.00	36.19	3.85
575	576	2.594962	CGTCTGCCGCTGTTCGTTT	61.595	57.895	0.00	0.00	36.19	3.60
576	577	1.082756	GTCTGCCGCTGTTCGTTTG	60.083	57.895	0.00	0.00	36.19	2.93
577	578	2.250939	TCTGCCGCTGTTCGTTTGG	61.251	57.895	0.00	0.00	36.19	3.28
578	579	3.254014	CTGCCGCTGTTCGTTTGGG	62.254	63.158	0.00	0.00	36.19	4.12
579	580	3.284449	GCCGCTGTTCGTTTGGGT	61.284	61.111	0.00	0.00	36.19	4.51
580	581	2.943653	CCGCTGTTCGTTTGGGTC	59.056	61.111	0.00	0.00	36.19	4.46
581	582	2.549282	CGCTGTTCGTTTGGGTCG	59.451	61.111	0.00	0.00	0.00	4.79
582	583	2.943653	GCTGTTCGTTTGGGTCGG	59.056	61.111	0.00	0.00	0.00	4.79
583	584	2.943653	CTGTTCGTTTGGGTCGGC	59.056	61.111	0.00	0.00	0.00	5.54
584	585	2.950172	CTGTTCGTTTGGGTCGGCG	61.950	63.158	0.00	0.00	0.00	6.46
585	586	4.379143	GTTCGTTTGGGTCGGCGC	62.379	66.667	0.00	0.00	0.00	6.53
594	595	4.084888	GGTCGGCGCGGACAAAAG	62.085	66.667	38.05	8.95	38.70	2.27
595	596	3.039588	GTCGGCGCGGACAAAAGA	61.040	61.111	34.74	4.76	36.91	2.52
596	597	2.736995	TCGGCGCGGACAAAAGAG	60.737	61.111	14.27	0.00	0.00	2.85
597	598	3.788766	CGGCGCGGACAAAAGAGG	61.789	66.667	9.72	0.00	0.00	3.69
598	599	2.358247	GGCGCGGACAAAAGAGGA	60.358	61.111	8.83	0.00	0.00	3.71
599	600	2.391389	GGCGCGGACAAAAGAGGAG	61.391	63.158	8.83	0.00	0.00	3.69
600	601	2.391389	GCGCGGACAAAAGAGGAGG	61.391	63.158	8.83	0.00	0.00	4.30
601	602	2.391389	CGCGGACAAAAGAGGAGGC	61.391	63.158	0.00	0.00	0.00	4.70
602	603	1.003233	GCGGACAAAAGAGGAGGCT	60.003	57.895	0.00	0.00	0.00	4.58
603	604	1.021920	GCGGACAAAAGAGGAGGCTC	61.022	60.000	5.78	5.78	0.00	4.70
604	605	0.321671	CGGACAAAAGAGGAGGCTCA	59.678	55.000	17.69	0.00	0.00	4.26
605	606	1.270839	CGGACAAAAGAGGAGGCTCAA	60.271	52.381	17.69	0.00	0.00	3.02
606	607	2.155279	GGACAAAAGAGGAGGCTCAAC	58.845	52.381	17.69	9.35	0.00	3.18
607	608	1.801178	GACAAAAGAGGAGGCTCAACG	59.199	52.381	17.69	0.00	0.00	4.10
608	609	0.519077	CAAAAGAGGAGGCTCAACGC	59.481	55.000	17.69	1.39	38.13	4.84
609	610	0.951040	AAAAGAGGAGGCTCAACGCG	60.951	55.000	17.69	3.53	40.44	6.01
610	611	3.941657	AAGAGGAGGCTCAACGCGC	62.942	63.158	17.69	0.00	40.44	6.86
618	619	3.334751	CTCAACGCGCCGACACAA	61.335	61.111	5.73	0.00	0.00	3.33
619	620	2.876879	CTCAACGCGCCGACACAAA	61.877	57.895	5.73	0.00	0.00	2.83
620	621	2.720750	CAACGCGCCGACACAAAC	60.721	61.111	5.73	0.00	0.00	2.93
621	622	3.944233	AACGCGCCGACACAAACC	61.944	61.111	5.73	0.00	0.00	3.27
623	624	3.943034	CGCGCCGACACAAACCAA	61.943	61.111	0.00	0.00	0.00	3.67
624	625	2.409651	GCGCCGACACAAACCAAA	59.590	55.556	0.00	0.00	0.00	3.28
625	626	1.007849	GCGCCGACACAAACCAAAT	60.008	52.632	0.00	0.00	0.00	2.32
626	627	1.001745	GCGCCGACACAAACCAAATC	61.002	55.000	0.00	0.00	0.00	2.17
627	628	0.309302	CGCCGACACAAACCAAATCA	59.691	50.000	0.00	0.00	0.00	2.57
628	629	1.068610	CGCCGACACAAACCAAATCAT	60.069	47.619	0.00	0.00	0.00	2.45
629	630	2.327568	GCCGACACAAACCAAATCATG	58.672	47.619	0.00	0.00	0.00	3.07
630	631	2.288152	GCCGACACAAACCAAATCATGT	60.288	45.455	0.00	0.00	0.00	3.21
631	632	3.564511	CCGACACAAACCAAATCATGTC	58.435	45.455	0.00	0.00	34.46	3.06
632	633	3.564511	CGACACAAACCAAATCATGTCC	58.435	45.455	0.00	0.00	34.32	4.02
633	634	3.564511	GACACAAACCAAATCATGTCCG	58.435	45.455	0.00	0.00	32.18	4.79
634	635	2.288152	ACACAAACCAAATCATGTCCGC	60.288	45.455	0.00	0.00	0.00	5.54
635	636	2.030007	CACAAACCAAATCATGTCCGCT	60.030	45.455	0.00	0.00	0.00	5.52
636	637	2.627699	ACAAACCAAATCATGTCCGCTT	59.372	40.909	0.00	0.00	0.00	4.68
637	638	3.244976	CAAACCAAATCATGTCCGCTTC	58.755	45.455	0.00	0.00	0.00	3.86
638	639	1.086696	ACCAAATCATGTCCGCTTCG	58.913	50.000	0.00	0.00	0.00	3.79
639	640	1.086696	CCAAATCATGTCCGCTTCGT	58.913	50.000	0.00	0.00	0.00	3.85
640	641	1.202065	CCAAATCATGTCCGCTTCGTG	60.202	52.381	0.00	0.00	0.00	4.35
641	642	1.464608	CAAATCATGTCCGCTTCGTGT	59.535	47.619	0.00	0.00	0.00	4.49
642	643	1.359848	AATCATGTCCGCTTCGTGTC	58.640	50.000	0.00	0.00	0.00	3.67
643	644	0.460284	ATCATGTCCGCTTCGTGTCC	60.460	55.000	0.00	0.00	0.00	4.02
644	645	2.126071	ATGTCCGCTTCGTGTCCG	60.126	61.111	0.00	0.00	0.00	4.79
645	646	2.927580	ATGTCCGCTTCGTGTCCGT	61.928	57.895	0.00	0.00	35.01	4.69
646	647	3.103911	GTCCGCTTCGTGTCCGTG	61.104	66.667	0.00	0.00	35.01	4.94
647	648	3.598715	TCCGCTTCGTGTCCGTGT	61.599	61.111	0.00	0.00	35.01	4.49
648	649	3.103911	CCGCTTCGTGTCCGTGTC	61.104	66.667	0.00	0.00	35.01	3.67
649	650	3.458579	CGCTTCGTGTCCGTGTCG	61.459	66.667	0.00	0.00	35.01	4.35
650	651	2.050714	GCTTCGTGTCCGTGTCGA	60.051	61.111	0.00	0.00	35.01	4.20
651	652	2.362800	GCTTCGTGTCCGTGTCGAC	61.363	63.158	9.11	9.11	33.38	4.20
652	653	2.051971	TTCGTGTCCGTGTCGACG	60.052	61.111	11.62	0.00	45.67	5.12
653	654	4.671549	TCGTGTCCGTGTCGACGC	62.672	66.667	19.11	19.11	44.68	5.19
654	655	4.967730	CGTGTCCGTGTCGACGCA	62.968	66.667	27.16	7.48	44.68	5.24
655	656	2.430244	GTGTCCGTGTCGACGCAT	60.430	61.111	27.16	0.00	44.68	4.73
656	657	2.019951	GTGTCCGTGTCGACGCATT	61.020	57.895	27.16	0.00	44.68	3.56
657	658	1.300311	TGTCCGTGTCGACGCATTT	60.300	52.632	27.16	0.00	44.68	2.32
658	659	1.129809	GTCCGTGTCGACGCATTTG	59.870	57.895	27.16	11.75	44.68	2.32
659	660	2.202171	CCGTGTCGACGCATTTGC	60.202	61.111	27.16	3.54	44.68	3.68
660	661	2.548787	CGTGTCGACGCATTTGCA	59.451	55.556	27.16	0.00	42.21	4.08
661	662	1.788203	CGTGTCGACGCATTTGCAC	60.788	57.895	27.16	8.99	42.21	4.57
662	663	1.569493	GTGTCGACGCATTTGCACT	59.431	52.632	23.67	0.00	42.21	4.40
663	664	0.041312	GTGTCGACGCATTTGCACTT	60.041	50.000	23.67	0.00	42.21	3.16
664	665	1.193650	GTGTCGACGCATTTGCACTTA	59.806	47.619	23.67	0.00	42.21	2.24
665	666	1.867865	TGTCGACGCATTTGCACTTAA	59.132	42.857	11.62	0.00	42.21	1.85
666	667	2.288186	TGTCGACGCATTTGCACTTAAA	59.712	40.909	11.62	0.00	42.21	1.52
667	668	3.058570	TGTCGACGCATTTGCACTTAAAT	60.059	39.130	11.62	0.00	42.21	1.40
668	669	3.911964	GTCGACGCATTTGCACTTAAATT	59.088	39.130	0.00	0.00	42.21	1.82
669	670	4.381566	GTCGACGCATTTGCACTTAAATTT	59.618	37.500	0.00	0.00	42.21	1.82
670	671	4.381270	TCGACGCATTTGCACTTAAATTTG	59.619	37.500	0.00	0.00	42.21	2.32
671	672	4.385379	GACGCATTTGCACTTAAATTTGC	58.615	39.130	0.00	0.00	42.21	3.68
672	673	3.121058	ACGCATTTGCACTTAAATTTGCG	60.121	39.130	12.76	12.76	46.33	4.85
673	674	3.155243	GCATTTGCACTTAAATTTGCGC	58.845	40.909	0.00	0.00	41.96	6.09
674	675	3.735121	CATTTGCACTTAAATTTGCGCC	58.265	40.909	4.18	0.00	41.96	6.53
675	676	1.789506	TTGCACTTAAATTTGCGCCC	58.210	45.000	4.18	0.00	41.96	6.13
676	677	0.037790	TGCACTTAAATTTGCGCCCC	60.038	50.000	4.18	0.00	41.96	5.80
677	678	0.037790	GCACTTAAATTTGCGCCCCA	60.038	50.000	4.18	0.00	0.00	4.96
678	679	1.606737	GCACTTAAATTTGCGCCCCAA	60.607	47.619	4.18	0.00	0.00	4.12
679	680	2.760374	CACTTAAATTTGCGCCCCAAA	58.240	42.857	4.18	0.00	46.64	3.28
680	681	2.736192	CACTTAAATTTGCGCCCCAAAG	59.264	45.455	4.18	3.85	45.87	2.77
681	682	2.367241	ACTTAAATTTGCGCCCCAAAGT	59.633	40.909	4.18	4.53	45.87	2.66
683	684	4.039366	ACTTAAATTTGCGCCCCAAAGTTA	59.961	37.500	4.18	6.22	46.34	2.24
684	685	2.448926	AATTTGCGCCCCAAAGTTAC	57.551	45.000	4.18	0.00	45.87	2.50
685	686	1.333177	ATTTGCGCCCCAAAGTTACA	58.667	45.000	4.18	0.00	45.87	2.41
686	687	0.386113	TTTGCGCCCCAAAGTTACAC	59.614	50.000	4.18	0.00	38.46	2.90
687	688	0.752009	TTGCGCCCCAAAGTTACACA	60.752	50.000	4.18	0.00	0.00	3.72
688	689	1.284715	GCGCCCCAAAGTTACACAC	59.715	57.895	0.00	0.00	0.00	3.82
689	690	1.448922	GCGCCCCAAAGTTACACACA	61.449	55.000	0.00	0.00	0.00	3.72
690	691	0.591170	CGCCCCAAAGTTACACACAG	59.409	55.000	0.00	0.00	0.00	3.66
691	692	1.812324	CGCCCCAAAGTTACACACAGA	60.812	52.381	0.00	0.00	0.00	3.41
692	693	2.514803	GCCCCAAAGTTACACACAGAT	58.485	47.619	0.00	0.00	0.00	2.90
693	694	3.681593	GCCCCAAAGTTACACACAGATA	58.318	45.455	0.00	0.00	0.00	1.98
694	695	4.270008	GCCCCAAAGTTACACACAGATAT	58.730	43.478	0.00	0.00	0.00	1.63
695	696	4.705023	GCCCCAAAGTTACACACAGATATT	59.295	41.667	0.00	0.00	0.00	1.28
696	697	5.185056	GCCCCAAAGTTACACACAGATATTT	59.815	40.000	0.00	0.00	0.00	1.40
697	698	6.620678	CCCCAAAGTTACACACAGATATTTG	58.379	40.000	0.00	0.00	0.00	2.32
698	699	6.350110	CCCCAAAGTTACACACAGATATTTGG	60.350	42.308	6.42	6.42	43.14	3.28
699	700	6.620678	CCAAAGTTACACACAGATATTTGGG	58.379	40.000	5.64	0.00	40.97	4.12
700	701	6.208599	CCAAAGTTACACACAGATATTTGGGT	59.791	38.462	0.00	0.00	40.97	4.51
701	702	7.255801	CCAAAGTTACACACAGATATTTGGGTT	60.256	37.037	0.00	0.00	40.97	4.11
702	703	7.448748	AAGTTACACACAGATATTTGGGTTC	57.551	36.000	0.00	0.00	30.74	3.62
703	704	5.642063	AGTTACACACAGATATTTGGGTTCG	59.358	40.000	0.00	0.00	30.74	3.95
706	707	3.374058	CACACAGATATTTGGGTTCGGTC	59.626	47.826	0.00	0.00	30.74	4.79
721	722	0.320073	CGGTCTGTTGGTTCGGCTTA	60.320	55.000	0.00	0.00	0.00	3.09
734	735	4.094442	GGTTCGGCTTACCATGTTTAGAAG	59.906	45.833	0.00	0.00	35.67	2.85
736	737	2.943033	CGGCTTACCATGTTTAGAAGGG	59.057	50.000	0.00	0.00	34.57	3.95
737	738	3.288092	GGCTTACCATGTTTAGAAGGGG	58.712	50.000	0.00	0.00	35.26	4.79
743	744	2.041081	CCATGTTTAGAAGGGGTGGACA	59.959	50.000	0.00	0.00	0.00	4.02
754	755	1.489230	GGGGTGGACAAATATCTCCGT	59.511	52.381	0.00	0.00	0.00	4.69
756	757	3.135167	GGGGTGGACAAATATCTCCGTTA	59.865	47.826	0.00	0.00	0.00	3.18
774	775	4.260334	CCGTTACGGTTTCGGAAAATATCC	60.260	45.833	16.53	1.44	46.05	2.59
788	789	5.657474	GAAAATATCCGGGTTTTTCCTTCC	58.343	41.667	17.39	3.18	34.70	3.46
789	790	2.406596	TATCCGGGTTTTTCCTTCCG	57.593	50.000	0.00	0.00	41.90	4.30
790	791	0.963856	ATCCGGGTTTTTCCTTCCGC	60.964	55.000	0.00	0.00	41.02	5.54
791	792	2.559330	CGGGTTTTTCCTTCCGCG	59.441	61.111	0.00	0.00	35.95	6.46
811	835	4.760047	GCTTCGCCTCCGCTTGGA	62.760	66.667	0.00	0.00	40.32	3.53
812	836	2.815647	CTTCGCCTCCGCTTGGAC	60.816	66.667	0.00	0.00	36.65	4.02
848	872	0.749091	CCAATCATTCAGCGCCCTCA	60.749	55.000	2.29	0.00	0.00	3.86
888	918	4.778415	CACTCGCACTCCCGTCCG	62.778	72.222	0.00	0.00	0.00	4.79
1083	1134	3.069318	AGCCTCTTCCCCGACGAC	61.069	66.667	0.00	0.00	0.00	4.34
1216	1273	1.336440	CGACCGATCTCATCTCAGCTT	59.664	52.381	0.00	0.00	0.00	3.74
1243	1302	3.699955	TAATCGCACGCTCGCTGCT	62.700	57.895	0.00	1.33	40.11	4.24
1269	1335	6.012658	TGTCCTGTTTGATTGATTAACAGC	57.987	37.500	0.00	0.00	44.54	4.40
1277	1343	6.795098	TTGATTGATTAACAGCACGTAACT	57.205	33.333	0.00	0.00	0.00	2.24
1278	1344	7.892778	TTGATTGATTAACAGCACGTAACTA	57.107	32.000	0.00	0.00	0.00	2.24
1279	1345	7.285783	TGATTGATTAACAGCACGTAACTAC	57.714	36.000	0.00	0.00	0.00	2.73
1280	1346	7.094631	TGATTGATTAACAGCACGTAACTACT	58.905	34.615	0.00	0.00	0.00	2.57
1281	1347	6.699895	TTGATTAACAGCACGTAACTACTG	57.300	37.500	0.00	0.00	36.22	2.74
1288	1354	4.698780	ACAGCACGTAACTACTGTATCTGA	59.301	41.667	5.80	0.00	41.41	3.27
1290	1356	4.698780	AGCACGTAACTACTGTATCTGACA	59.301	41.667	0.00	0.00	36.35	3.58
1304	1370	1.938577	TCTGACATAGCTCGACGTACC	59.061	52.381	0.00	0.00	0.00	3.34
1307	1381	2.686405	TGACATAGCTCGACGTACCAAT	59.314	45.455	0.00	0.00	0.00	3.16
1310	1384	4.856664	ACATAGCTCGACGTACCAATTAG	58.143	43.478	0.00	0.00	0.00	1.73
1313	1387	4.548991	AGCTCGACGTACCAATTAGTAG	57.451	45.455	0.00	0.00	0.00	2.57
1315	1389	5.118990	AGCTCGACGTACCAATTAGTAGTA	58.881	41.667	0.00	0.00	0.00	1.82
1448	1526	2.750237	GGAATTTCCGCGCCCTGT	60.750	61.111	0.00	0.00	0.00	4.00
1480	1559	2.359143	CCTTGGAATTATTGGCCCTGGA	60.359	50.000	0.00	0.00	0.00	3.86
1630	1710	1.859427	CTTGCCGACAGCTGCACATT	61.859	55.000	15.27	0.00	44.23	2.71
1633	1713	1.651240	GCCGACAGCTGCACATTGAT	61.651	55.000	15.27	0.00	38.99	2.57
1644	1724	2.103538	CATTGATGTGCTGGGCGC	59.896	61.111	0.00	0.00	39.75	6.53
1774	1859	4.080919	TGAGATGGTGGAGTAGATTTGTGG	60.081	45.833	0.00	0.00	0.00	4.17
1777	1862	2.028476	TGGTGGAGTAGATTTGTGGTCG	60.028	50.000	0.00	0.00	0.00	4.79
1780	1865	2.028476	TGGAGTAGATTTGTGGTCGGTG	60.028	50.000	0.00	0.00	0.00	4.94
1784	1869	3.830755	AGTAGATTTGTGGTCGGTGTAGT	59.169	43.478	0.00	0.00	0.00	2.73
1786	1871	4.877378	AGATTTGTGGTCGGTGTAGTTA	57.123	40.909	0.00	0.00	0.00	2.24
1787	1872	4.817517	AGATTTGTGGTCGGTGTAGTTAG	58.182	43.478	0.00	0.00	0.00	2.34
1788	1873	4.525487	AGATTTGTGGTCGGTGTAGTTAGA	59.475	41.667	0.00	0.00	0.00	2.10
1789	1874	3.928727	TTGTGGTCGGTGTAGTTAGAG	57.071	47.619	0.00	0.00	0.00	2.43
1790	1875	1.542915	TGTGGTCGGTGTAGTTAGAGC	59.457	52.381	0.00	0.00	0.00	4.09
1791	1876	0.806868	TGGTCGGTGTAGTTAGAGCG	59.193	55.000	1.99	1.99	41.07	5.03
1792	1877	0.807496	GGTCGGTGTAGTTAGAGCGT	59.193	55.000	7.59	0.00	40.64	5.07
1793	1878	1.200948	GGTCGGTGTAGTTAGAGCGTT	59.799	52.381	7.59	0.00	40.64	4.84
1806	1915	0.676782	GAGCGTTAATGGTGGCACCT	60.677	55.000	34.69	19.97	39.58	4.00
1809	1918	0.446222	CGTTAATGGTGGCACCTTCG	59.554	55.000	34.69	23.66	39.58	3.79
1829	1938	3.314080	TCGTCTTCCATTTTGAAAGCGTT	59.686	39.130	0.00	0.00	0.00	4.84
1831	1940	5.007823	TCGTCTTCCATTTTGAAAGCGTTAA	59.992	36.000	0.00	0.00	0.00	2.01
1843	1957	0.179000	AGCGTTAAGGAGCCTGATGG	59.821	55.000	0.00	0.00	0.00	3.51
1847	1961	2.678336	CGTTAAGGAGCCTGATGGTTTC	59.322	50.000	0.00	0.00	35.27	2.78
1851	1965	0.332972	GGAGCCTGATGGTTTCCCTT	59.667	55.000	0.00	0.00	34.95	3.95
1859	1973	5.833131	GCCTGATGGTTTCCCTTCAATAATA	59.167	40.000	0.00	0.00	42.52	0.98
1860	1974	6.494835	GCCTGATGGTTTCCCTTCAATAATAT	59.505	38.462	0.00	0.00	42.52	1.28
1872	1986	9.586732	TCCCTTCAATAATATTAGAAACCATGG	57.413	33.333	11.19	11.19	0.00	3.66
1873	1987	9.367160	CCCTTCAATAATATTAGAAACCATGGT	57.633	33.333	13.00	13.00	0.00	3.55
1875	1989	9.683069	CTTCAATAATATTAGAAACCATGGTGC	57.317	33.333	20.60	14.07	0.00	5.01
1876	1990	8.995027	TCAATAATATTAGAAACCATGGTGCT	57.005	30.769	20.60	20.57	0.00	4.40
1877	1991	9.420118	TCAATAATATTAGAAACCATGGTGCTT	57.580	29.630	20.60	10.24	0.00	3.91
1878	1992	9.467258	CAATAATATTAGAAACCATGGTGCTTG	57.533	33.333	20.60	7.75	0.00	4.01
1892	2006	1.620323	GTGCTTGCCCTTGATTCCTTT	59.380	47.619	0.00	0.00	0.00	3.11
1895	2009	2.159379	GCTTGCCCTTGATTCCTTTACG	60.159	50.000	0.00	0.00	0.00	3.18
1897	2011	2.706890	TGCCCTTGATTCCTTTACGTC	58.293	47.619	0.00	0.00	0.00	4.34
1924	2039	2.871133	TGTTGATACCACGTCGATGTC	58.129	47.619	7.47	0.00	0.00	3.06
1933	2048	1.459592	CACGTCGATGTCCACTTTTCC	59.540	52.381	7.47	0.00	0.00	3.13
1957	2072	7.663905	TCCTATGCTATGTTTTGTTACTGTTGT	59.336	33.333	0.00	0.00	0.00	3.32
1961	2076	8.890124	TGCTATGTTTTGTTACTGTTGTACTA	57.110	30.769	0.00	0.00	0.00	1.82
1997	2112	6.150396	ACCGGTATGTTTTTGTTGAATTCA	57.850	33.333	4.49	3.38	0.00	2.57
2001	2116	9.197694	CCGGTATGTTTTTGTTGAATTCATTTA	57.802	29.630	9.40	0.00	0.00	1.40
2032	2148	5.981174	TCGTTACTATTGCACTGTGTTTTC	58.019	37.500	9.86	0.00	0.00	2.29
2045	2162	6.498304	CACTGTGTTTTCTGAGTTGCTTTAT	58.502	36.000	0.00	0.00	0.00	1.40
2050	2167	7.230510	TGTGTTTTCTGAGTTGCTTTATATGGT	59.769	33.333	0.00	0.00	0.00	3.55
2051	2168	8.082242	GTGTTTTCTGAGTTGCTTTATATGGTT	58.918	33.333	0.00	0.00	0.00	3.67
2244	2372	4.706842	TGGACCTCAACTAGCTTTTTCT	57.293	40.909	0.00	0.00	0.00	2.52
2598	2726	7.806180	AGTATCCAAGGAGCTATTACAAATGT	58.194	34.615	0.00	0.00	0.00	2.71
2607	2735	6.998673	GGAGCTATTACAAATGTACCCTGAAT	59.001	38.462	0.00	0.00	0.00	2.57
2691	2819	1.303561	TCAGCACTGCCATGAACCC	60.304	57.895	0.00	0.00	0.00	4.11
2771	2899	1.423541	TGCCAAGGAGCCTTCAACTAA	59.576	47.619	0.00	0.00	33.42	2.24
2823	2951	4.399934	GGAAAACCTATAACGCCAAATGGA	59.600	41.667	2.98	0.00	37.39	3.41
2825	2953	6.406512	GGAAAACCTATAACGCCAAATGGAAT	60.407	38.462	2.98	0.00	37.39	3.01
2830	2958	5.473162	CCTATAACGCCAAATGGAATGATGA	59.527	40.000	2.98	0.00	37.39	2.92
2831	2959	3.508744	AACGCCAAATGGAATGATGAC	57.491	42.857	2.98	0.00	37.39	3.06
2837	2965	3.633525	CCAAATGGAATGATGACGGATGT	59.366	43.478	0.00	0.00	37.39	3.06
2862	2990	1.377333	GCCAACGAAGGAAGAGGGG	60.377	63.158	0.00	0.00	0.00	4.79
2933	3061	8.102676	TGAAATAAGAACTGTTGATGGAGATGA	58.897	33.333	0.00	0.00	0.00	2.92
3192	3320	0.623723	TCACCCAAGGTAAGCCCATC	59.376	55.000	0.00	0.00	32.11	3.51
3196	3324	1.496429	CCCAAGGTAAGCCCATCATCT	59.504	52.381	0.00	0.00	34.66	2.90
3213	3341	9.472361	CCCATCATCTCATTTTATTGTTGAATC	57.528	33.333	0.00	0.00	0.00	2.52
3299	3427	8.892723	TGTGATAACTGCCTTGAATACTAATTG	58.107	33.333	0.00	0.00	0.00	2.32
3307	3435	8.588290	TGCCTTGAATACTAATTGGTTAATGT	57.412	30.769	0.00	0.00	0.00	2.71
3314	3442	5.914898	ACTAATTGGTTAATGTTGGAGCC	57.085	39.130	0.00	0.00	0.00	4.70
3316	3444	6.727394	ACTAATTGGTTAATGTTGGAGCCTA	58.273	36.000	0.00	0.00	0.00	3.93
3323	3451	5.652452	GGTTAATGTTGGAGCCTATGAAGTT	59.348	40.000	0.00	0.00	0.00	2.66
3325	3453	5.649782	AATGTTGGAGCCTATGAAGTTTG	57.350	39.130	0.00	0.00	0.00	2.93
3360	3488	8.633075	ACTTGATGTTGTTATTGACTTTGTTG	57.367	30.769	0.00	0.00	0.00	3.33
3361	3489	7.706179	ACTTGATGTTGTTATTGACTTTGTTGG	59.294	33.333	0.00	0.00	0.00	3.77
3362	3490	5.982516	TGATGTTGTTATTGACTTTGTTGGC	59.017	36.000	0.00	0.00	0.00	4.52
3363	3491	5.330455	TGTTGTTATTGACTTTGTTGGCA	57.670	34.783	0.00	0.00	0.00	4.92
3364	3492	5.911752	TGTTGTTATTGACTTTGTTGGCAT	58.088	33.333	0.00	0.00	0.00	4.40
3365	3493	5.982516	TGTTGTTATTGACTTTGTTGGCATC	59.017	36.000	0.00	0.00	0.00	3.91
3366	3494	5.781210	TGTTATTGACTTTGTTGGCATCA	57.219	34.783	0.00	0.00	0.00	3.07
3367	3495	6.154203	TGTTATTGACTTTGTTGGCATCAA	57.846	33.333	6.89	6.89	34.03	2.57
3393	3521	6.499234	TGATGTTATTGACAACTCCACATG	57.501	37.500	7.67	0.00	42.62	3.21
3436	3564	0.961019	TGGGACATTTGTCTTGCAGC	59.039	50.000	10.32	0.00	44.20	5.25
3437	3565	0.961019	GGGACATTTGTCTTGCAGCA	59.039	50.000	10.32	0.00	44.20	4.41
3445	3573	0.245266	TGTCTTGCAGCAATGCATGG	59.755	50.000	8.67	0.00	44.94	3.66
3446	3574	0.528924	GTCTTGCAGCAATGCATGGA	59.471	50.000	8.67	1.17	44.94	3.41
3447	3575	1.067425	GTCTTGCAGCAATGCATGGAA	60.067	47.619	8.67	9.41	44.94	3.53
3449	3577	2.037381	TCTTGCAGCAATGCATGGAAAA	59.963	40.909	8.67	0.00	44.94	2.29
3450	3578	2.087501	TGCAGCAATGCATGGAAAAG	57.912	45.000	8.35	0.00	40.23	2.27
3451	3579	1.338294	TGCAGCAATGCATGGAAAAGG	60.338	47.619	8.35	0.00	40.23	3.11
3452	3580	1.365699	CAGCAATGCATGGAAAAGGC	58.634	50.000	8.35	0.00	35.67	4.35
3453	3581	1.066430	CAGCAATGCATGGAAAAGGCT	60.066	47.619	8.35	1.17	36.25	4.58
3454	3582	1.626825	AGCAATGCATGGAAAAGGCTT	59.373	42.857	8.35	0.00	36.25	4.35
3455	3583	2.039348	AGCAATGCATGGAAAAGGCTTT	59.961	40.909	8.35	6.68	36.25	3.51
3456	3584	3.261390	AGCAATGCATGGAAAAGGCTTTA	59.739	39.130	13.77	0.00	36.25	1.85
3457	3585	4.002316	GCAATGCATGGAAAAGGCTTTAA	58.998	39.130	13.77	2.64	36.25	1.52
3458	3586	4.455190	GCAATGCATGGAAAAGGCTTTAAA	59.545	37.500	13.77	2.26	36.25	1.52
3459	3587	5.124297	GCAATGCATGGAAAAGGCTTTAAAT	59.876	36.000	13.77	4.64	36.25	1.40
3460	3588	6.349528	GCAATGCATGGAAAAGGCTTTAAATT	60.350	34.615	13.77	0.00	36.25	1.82
3461	3589	7.595604	CAATGCATGGAAAAGGCTTTAAATTT	58.404	30.769	13.77	0.00	36.25	1.82
3462	3590	6.557291	TGCATGGAAAAGGCTTTAAATTTG	57.443	33.333	13.77	8.83	36.25	2.32
3463	3591	5.048852	TGCATGGAAAAGGCTTTAAATTTGC	60.049	36.000	13.77	17.43	36.25	3.68
3464	3592	5.048852	GCATGGAAAAGGCTTTAAATTTGCA	60.049	36.000	13.77	9.02	37.48	4.08
3527	3655	8.607441	TGATAGGCTAATACTGCTTGTTAATG	57.393	34.615	0.00	0.00	0.00	1.90
3528	3656	8.428852	TGATAGGCTAATACTGCTTGTTAATGA	58.571	33.333	0.00	0.00	0.00	2.57
3530	3658	6.414732	AGGCTAATACTGCTTGTTAATGACA	58.585	36.000	0.00	0.00	36.19	3.58
3560	3689	5.912149	TCCATCCTACATAGAATTGGCTT	57.088	39.130	0.00	0.00	0.00	4.35
3582	3711	7.094248	GGCTTTGGAATTATTTGGCAAAGAATT	60.094	33.333	33.46	33.46	42.92	2.17
3641	3770	5.902760	AGATCCTCCTGCTGATCTAAGTAT	58.097	41.667	0.36	0.00	44.44	2.12
3643	3772	7.651607	AGATCCTCCTGCTGATCTAAGTATAT	58.348	38.462	0.36	0.00	44.44	0.86
3692	3821	7.566760	TTGAATGAGTACACATTTGACTGTT	57.433	32.000	17.89	0.00	40.03	3.16
3693	3822	8.669946	TTGAATGAGTACACATTTGACTGTTA	57.330	30.769	17.89	0.00	40.03	2.41
3696	3825	6.838198	TGAGTACACATTTGACTGTTACAC	57.162	37.500	0.00	0.00	0.00	2.90
3698	3827	6.256975	TGAGTACACATTTGACTGTTACACAC	59.743	38.462	0.00	0.00	0.00	3.82
3708	3837	5.053811	TGACTGTTACACACATAGTTGGTG	58.946	41.667	0.00	0.00	41.95	4.17
3712	3841	6.037830	ACTGTTACACACATAGTTGGTGAAAC	59.962	38.462	0.00	0.00	39.53	2.78
3721	3850	7.040686	ACACATAGTTGGTGAAACAAGGAATAC	60.041	37.037	0.00	0.00	41.61	1.89
3722	3851	7.001674	ACATAGTTGGTGAAACAAGGAATACA	58.998	34.615	0.00	0.00	41.61	2.29
3768	3897	4.951715	AGTGTGGTGATGAATAATGTGCAT	59.048	37.500	0.00	0.00	0.00	3.96
3791	3928	7.255035	GCATGCTTATCAATTGTCTGTGTATCT	60.255	37.037	11.37	0.00	0.00	1.98
3806	3943	9.813080	GTCTGTGTATCTTCTGTTATTTTTCAC	57.187	33.333	0.00	0.00	0.00	3.18
3815	3952	6.633500	TCTGTTATTTTTCACAAGACCCAG	57.367	37.500	0.00	0.00	0.00	4.45
3820	3957	0.823356	TTTCACAAGACCCAGCTGGC	60.823	55.000	28.39	14.93	37.83	4.85
3859	4049	8.378115	TCCAAATTGAAAAACCATATCTCCAT	57.622	30.769	0.00	0.00	0.00	3.41
3860	4050	9.486123	TCCAAATTGAAAAACCATATCTCCATA	57.514	29.630	0.00	0.00	0.00	2.74
3863	4053	9.801873	AAATTGAAAAACCATATCTCCATAACG	57.198	29.630	0.00	0.00	0.00	3.18
3869	4059	8.980143	AAAACCATATCTCCATAACGTTTTTG	57.020	30.769	5.91	4.97	31.74	2.44
3870	4060	7.931578	AACCATATCTCCATAACGTTTTTGA	57.068	32.000	5.91	0.00	0.00	2.69
3871	4061	7.553881	ACCATATCTCCATAACGTTTTTGAG	57.446	36.000	5.91	9.79	0.00	3.02
3873	4063	7.610305	ACCATATCTCCATAACGTTTTTGAGTT	59.390	33.333	5.91	7.31	0.00	3.01
3874	4064	8.122952	CCATATCTCCATAACGTTTTTGAGTTC	58.877	37.037	5.91	0.00	0.00	3.01
3875	4065	5.934935	TCTCCATAACGTTTTTGAGTTCC	57.065	39.130	5.91	0.00	0.00	3.62
3876	4066	5.369833	TCTCCATAACGTTTTTGAGTTCCA	58.630	37.500	5.91	0.00	0.00	3.53
3877	4067	5.468746	TCTCCATAACGTTTTTGAGTTCCAG	59.531	40.000	5.91	0.00	0.00	3.86
3878	4068	5.369833	TCCATAACGTTTTTGAGTTCCAGA	58.630	37.500	5.91	0.00	0.00	3.86
3883	4073	6.944557	AACGTTTTTGAGTTCCAGAAAAAG	57.055	33.333	0.00	0.00	31.73	2.27
3885	4075	6.322491	ACGTTTTTGAGTTCCAGAAAAAGAG	58.678	36.000	0.00	0.00	31.73	2.85
3890	4080	5.310409	TGAGTTCCAGAAAAAGAGTCCAT	57.690	39.130	0.00	0.00	0.00	3.41
3901	4091	3.692257	AAGAGTCCATGAACCTGAGTG	57.308	47.619	0.00	0.00	0.00	3.51
3917	4108	1.944177	AGTGCCTACTCTGTCCATGT	58.056	50.000	0.00	0.00	28.79	3.21
3947	4138	4.425180	TTACAAGTGCACTTACCAAGGA	57.575	40.909	30.67	13.07	34.28	3.36
4025	4216	3.093717	ACATACGAAGGGAAGCATACG	57.906	47.619	0.00	0.00	0.00	3.06
4104	4295	7.574592	GCAAAGAGCAGACTTATTCAGAACAAT	60.575	37.037	0.00	0.00	44.79	2.71
4112	4303	5.005740	ACTTATTCAGAACAATCAGCTGCA	58.994	37.500	9.47	0.00	0.00	4.41
4145	4336	6.258947	GCAGTAGCTCGGAAAAGAGAAAATAT	59.741	38.462	0.00	0.00	40.57	1.28
4188	4379	0.392595	CGCCTTCTAGTTTGGTCCCC	60.393	60.000	0.00	0.00	0.00	4.81
4334	4525	8.615211	CAGTAATAACTCTTGCATATGCAGAAA	58.385	33.333	28.04	14.65	42.83	2.52
4373	4564	1.149986	TGGGTGGTCCATTGTTGGTA	58.850	50.000	0.00	0.00	44.06	3.25
4425	4621	2.878406	GTGTCAGGTGCACATACTTTGT	59.122	45.455	20.43	0.00	39.91	2.83
4426	4622	3.058914	GTGTCAGGTGCACATACTTTGTC	60.059	47.826	20.43	5.33	36.00	3.18
4427	4623	3.181455	TGTCAGGTGCACATACTTTGTCT	60.181	43.478	20.43	0.00	36.00	3.41
4428	4624	3.187227	GTCAGGTGCACATACTTTGTCTG	59.813	47.826	20.43	12.85	36.00	3.51
4441	4637	8.106178	ACATACTTTGTCTGTTGAAAACTTGGC	61.106	37.037	0.00	0.00	40.58	4.52
4502	4698	5.806654	AACCCAACTGCAATTTGAAGTAT	57.193	34.783	10.50	0.00	34.45	2.12
4570	4801	8.870879	GTCGTGCTTCTAAAAACTAATCTGTAT	58.129	33.333	0.00	0.00	0.00	2.29
4697	4930	4.345859	TGTGTTCTGAACGGGTATCTTT	57.654	40.909	15.18	0.00	0.00	2.52
4723	4956	4.821805	TCTTTCCTTGTCAACATCTTCCAC	59.178	41.667	0.00	0.00	0.00	4.02
4735	4968	1.574134	TCTTCCACGTCCACGAAAAC	58.426	50.000	6.03	0.00	43.02	2.43
4763	4996	1.019673	CCTGCAATCGTGGATCTTGG	58.980	55.000	0.00	0.00	0.00	3.61
4809	5042	4.443621	GTTCCTCCAATCCTAGCAGTTAC	58.556	47.826	0.00	0.00	0.00	2.50
4819	5052	7.337942	CCAATCCTAGCAGTTACATTCTTCTTT	59.662	37.037	0.00	0.00	0.00	2.52
4883	5118	4.705110	TTGGGAGAATTCTCTGTCACAA	57.295	40.909	29.64	22.52	42.48	3.33
4910	5146	2.543031	CGGTGAATCCTATTTCTCGCGA	60.543	50.000	9.26	9.26	0.00	5.87
4911	5147	3.053455	GGTGAATCCTATTTCTCGCGAG	58.947	50.000	30.03	30.03	0.00	5.03
4913	5149	2.062519	GAATCCTATTTCTCGCGAGGC	58.937	52.381	33.98	3.39	0.00	4.70
4933	5170	3.509659	GCGGATAGCCACCAAACC	58.490	61.111	0.00	0.00	40.81	3.27
4953	5190	1.083806	CATAACTCTCGCCGCTTGCA	61.084	55.000	0.00	0.00	41.33	4.08
4956	5193	0.391130	AACTCTCGCCGCTTGCATTA	60.391	50.000	0.00	0.00	41.33	1.90
4957	5194	0.391130	ACTCTCGCCGCTTGCATTAA	60.391	50.000	0.00	0.00	41.33	1.40
4961	5199	1.331756	CTCGCCGCTTGCATTAATTCT	59.668	47.619	0.00	0.00	41.33	2.40
4966	5204	2.539547	CCGCTTGCATTAATTCTGGACG	60.540	50.000	0.00	0.00	0.00	4.79
4993	5231	2.742053	ACTTATTCGCTTTGTGTCGCAT	59.258	40.909	0.00	0.00	0.00	4.73
4996	5234	1.506309	TTCGCTTTGTGTCGCATGCT	61.506	50.000	17.13	0.00	0.00	3.79
5009	5247	0.375106	GCATGCTGCGAAGTAGAACC	59.625	55.000	11.37	0.00	45.23	3.62
5059	5298	5.008331	CCTTCTGGTTAAGGGAAGGTTAAC	58.992	45.833	16.65	0.00	46.37	2.01
5067	5306	2.867624	AGGGAAGGTTAACCGGTTTTC	58.132	47.619	27.64	21.57	42.08	2.29
5070	5309	3.638160	GGGAAGGTTAACCGGTTTTCTTT	59.362	43.478	27.64	19.76	42.08	2.52
5072	5311	5.284079	GGAAGGTTAACCGGTTTTCTTTTC	58.716	41.667	27.64	20.38	42.08	2.29
5075	5314	5.195185	AGGTTAACCGGTTTTCTTTTCTGA	58.805	37.500	27.64	0.00	42.08	3.27
5076	5315	5.066893	AGGTTAACCGGTTTTCTTTTCTGAC	59.933	40.000	27.64	4.20	42.08	3.51
5077	5316	5.066893	GGTTAACCGGTTTTCTTTTCTGACT	59.933	40.000	27.64	0.00	0.00	3.41
5081	5320	5.647589	ACCGGTTTTCTTTTCTGACTTTTC	58.352	37.500	0.00	0.00	0.00	2.29
5107	5346	7.908193	TTTTTGCTTTCTGAAATACGAGAAC	57.092	32.000	2.88	0.00	0.00	3.01
5122	5361	4.342772	ACGAGAACAATATTCAAATGCGC	58.657	39.130	0.00	0.00	0.00	6.09
5143	5382	4.444056	CGCACAATTTTTGAAAGTCGGAAT	59.556	37.500	0.00	0.00	0.00	3.01
5144	5383	5.627367	CGCACAATTTTTGAAAGTCGGAATA	59.373	36.000	0.00	0.00	0.00	1.75
5146	5385	7.461416	CGCACAATTTTTGAAAGTCGGAATATC	60.461	37.037	0.00	0.00	0.00	1.63

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
6	7	2.887568	CACATCTCGGCGGAGTGC	60.888	66.667	19.51	0.00	41.26	4.40
7	8	2.202797	CCACATCTCGGCGGAGTG	60.203	66.667	19.51	17.81	41.26	3.51
8	9	4.148825	GCCACATCTCGGCGGAGT	62.149	66.667	19.51	5.96	40.35	3.85
19	20	0.757935	GGCAAGGATGATGGCCACAT	60.758	55.000	8.16	14.36	45.70	3.21
20	21	1.380246	GGCAAGGATGATGGCCACA	60.380	57.895	8.16	9.31	45.70	4.17
21	22	3.530067	GGCAAGGATGATGGCCAC	58.470	61.111	8.16	2.36	45.70	5.01
23	24	1.380246	TGTGGCAAGGATGATGGCC	60.380	57.895	0.00	0.00	46.58	5.36
24	25	0.682209	ACTGTGGCAAGGATGATGGC	60.682	55.000	0.00	0.00	43.15	4.40
25	26	1.475280	CAACTGTGGCAAGGATGATGG	59.525	52.381	0.00	0.00	0.00	3.51
26	27	2.165167	ACAACTGTGGCAAGGATGATG	58.835	47.619	0.00	0.00	0.00	3.07
27	28	2.592102	ACAACTGTGGCAAGGATGAT	57.408	45.000	0.00	0.00	0.00	2.45
28	29	3.057969	CTACAACTGTGGCAAGGATGA	57.942	47.619	0.00	0.00	0.00	2.92
37	38	1.580845	GGCTGCTGCTACAACTGTGG	61.581	60.000	15.64	0.00	39.59	4.17
38	39	0.886043	TGGCTGCTGCTACAACTGTG	60.886	55.000	15.64	0.00	39.59	3.66
39	40	0.179020	TTGGCTGCTGCTACAACTGT	60.179	50.000	15.64	0.00	39.59	3.55
40	41	0.953727	TTTGGCTGCTGCTACAACTG	59.046	50.000	15.64	0.00	39.59	3.16
41	42	1.691196	TTTTGGCTGCTGCTACAACT	58.309	45.000	15.64	0.00	39.59	3.16
42	43	2.397549	CTTTTTGGCTGCTGCTACAAC	58.602	47.619	15.64	0.00	39.59	3.32
43	44	1.269726	GCTTTTTGGCTGCTGCTACAA	60.270	47.619	15.64	9.13	39.59	2.41
44	45	0.314935	GCTTTTTGGCTGCTGCTACA	59.685	50.000	15.64	2.95	39.59	2.74
45	46	0.600057	AGCTTTTTGGCTGCTGCTAC	59.400	50.000	15.64	0.08	41.43	3.58
46	47	0.883833	GAGCTTTTTGGCTGCTGCTA	59.116	50.000	15.64	6.53	43.20	3.49
47	48	1.664306	GAGCTTTTTGGCTGCTGCT	59.336	52.632	15.64	0.36	43.20	4.24
48	49	1.373873	GGAGCTTTTTGGCTGCTGC	60.374	57.895	7.10	7.10	45.16	5.25
49	50	1.080974	CGGAGCTTTTTGGCTGCTG	60.081	57.895	0.00	0.00	46.14	4.41
50	51	3.359002	CGGAGCTTTTTGGCTGCT	58.641	55.556	0.00	0.00	46.14	4.24
66	67	4.899239	GAGTCCAGGATGCCGGCG	62.899	72.222	23.90	6.63	31.97	6.46
67	68	4.554036	GGAGTCCAGGATGCCGGC	62.554	72.222	22.73	22.73	31.97	6.13
68	69	4.227134	CGGAGTCCAGGATGCCGG	62.227	72.222	20.11	0.00	38.40	6.13
69	70	4.227134	CCGGAGTCCAGGATGCCG	62.227	72.222	20.66	20.66	41.53	5.69
70	71	4.554036	GCCGGAGTCCAGGATGCC	62.554	72.222	20.17	0.00	31.97	4.40
71	72	4.899239	CGCCGGAGTCCAGGATGC	62.899	72.222	20.17	8.82	31.97	3.91
72	73	4.227134	CCGCCGGAGTCCAGGATG	62.227	72.222	20.17	12.54	0.00	3.51
104	105	3.425713	ATGCTCAGCGCGTGTTGG	61.426	61.111	13.03	5.10	43.27	3.77
125	126	4.785453	CCTTCCCACAGAGGCGCC	62.785	72.222	21.89	21.89	35.39	6.53
128	129	2.045536	CTGCCTTCCCACAGAGGC	60.046	66.667	7.41	7.41	46.82	4.70
129	130	2.673523	CCTGCCTTCCCACAGAGG	59.326	66.667	0.00	0.00	35.90	3.69
130	131	2.673523	CCCTGCCTTCCCACAGAG	59.326	66.667	0.00	0.00	35.90	3.35
131	132	3.650950	GCCCTGCCTTCCCACAGA	61.651	66.667	0.00	0.00	35.90	3.41
134	135	4.785453	CTCGCCCTGCCTTCCCAC	62.785	72.222	0.00	0.00	0.00	4.61
168	169	2.262915	GATGATAGGAGCCGCCGG	59.737	66.667	0.00	0.00	43.43	6.13
169	170	2.099652	TTGGATGATAGGAGCCGCCG	62.100	60.000	0.00	0.00	43.43	6.46
170	171	0.108585	TTTGGATGATAGGAGCCGCC	59.891	55.000	0.00	0.00	0.00	6.13
171	172	1.230324	GTTTGGATGATAGGAGCCGC	58.770	55.000	0.00	0.00	0.00	6.53
172	173	1.873903	CGGTTTGGATGATAGGAGCCG	60.874	57.143	0.00	0.00	0.00	5.52
173	174	1.884235	CGGTTTGGATGATAGGAGCC	58.116	55.000	0.00	0.00	0.00	4.70
174	175	1.230324	GCGGTTTGGATGATAGGAGC	58.770	55.000	0.00	0.00	0.00	4.70
175	176	1.417890	AGGCGGTTTGGATGATAGGAG	59.582	52.381	0.00	0.00	0.00	3.69
176	177	1.416401	GAGGCGGTTTGGATGATAGGA	59.584	52.381	0.00	0.00	0.00	2.94
177	178	1.543429	GGAGGCGGTTTGGATGATAGG	60.543	57.143	0.00	0.00	0.00	2.57
178	179	1.140852	TGGAGGCGGTTTGGATGATAG	59.859	52.381	0.00	0.00	0.00	2.08
179	180	1.134220	GTGGAGGCGGTTTGGATGATA	60.134	52.381	0.00	0.00	0.00	2.15
180	181	0.394352	GTGGAGGCGGTTTGGATGAT	60.394	55.000	0.00	0.00	0.00	2.45
181	182	1.002624	GTGGAGGCGGTTTGGATGA	60.003	57.895	0.00	0.00	0.00	2.92
182	183	2.046285	GGTGGAGGCGGTTTGGATG	61.046	63.158	0.00	0.00	0.00	3.51
183	184	2.231380	AGGTGGAGGCGGTTTGGAT	61.231	57.895	0.00	0.00	0.00	3.41
184	185	2.852075	AGGTGGAGGCGGTTTGGA	60.852	61.111	0.00	0.00	0.00	3.53
185	186	2.672996	CAGGTGGAGGCGGTTTGG	60.673	66.667	0.00	0.00	0.00	3.28
186	187	2.672996	CCAGGTGGAGGCGGTTTG	60.673	66.667	0.00	0.00	37.39	2.93
187	188	3.966543	CCCAGGTGGAGGCGGTTT	61.967	66.667	0.00	0.00	37.39	3.27
198	199	0.995024	CCTTCTCATTCACCCCAGGT	59.005	55.000	0.00	0.00	35.62	4.00
199	200	1.065126	GTCCTTCTCATTCACCCCAGG	60.065	57.143	0.00	0.00	0.00	4.45
200	201	1.065126	GGTCCTTCTCATTCACCCCAG	60.065	57.143	0.00	0.00	0.00	4.45
201	202	0.991920	GGTCCTTCTCATTCACCCCA	59.008	55.000	0.00	0.00	0.00	4.96
202	203	1.065126	CAGGTCCTTCTCATTCACCCC	60.065	57.143	0.00	0.00	0.00	4.95
203	204	1.680249	GCAGGTCCTTCTCATTCACCC	60.680	57.143	0.00	0.00	0.00	4.61
204	205	1.003580	TGCAGGTCCTTCTCATTCACC	59.996	52.381	0.00	0.00	0.00	4.02
205	206	2.354259	CTGCAGGTCCTTCTCATTCAC	58.646	52.381	5.57	0.00	0.00	3.18
206	207	1.339438	GCTGCAGGTCCTTCTCATTCA	60.339	52.381	17.12	0.00	0.00	2.57
207	208	1.377536	GCTGCAGGTCCTTCTCATTC	58.622	55.000	17.12	0.00	0.00	2.67
208	209	0.034670	GGCTGCAGGTCCTTCTCATT	60.035	55.000	17.12	0.00	0.00	2.57
209	210	1.606531	GGCTGCAGGTCCTTCTCAT	59.393	57.895	17.12	0.00	0.00	2.90
210	211	2.596851	GGGCTGCAGGTCCTTCTCA	61.597	63.158	17.12	0.00	36.61	3.27
211	212	2.270527	GGGCTGCAGGTCCTTCTC	59.729	66.667	17.12	0.00	36.61	2.87
212	213	3.334054	GGGGCTGCAGGTCCTTCT	61.334	66.667	17.12	0.00	40.18	2.85
213	214	4.785453	CGGGGCTGCAGGTCCTTC	62.785	72.222	17.12	5.23	40.18	3.46
233	234	3.649277	CTTCGGTCCGCTGGTCCAG	62.649	68.421	15.15	15.15	30.37	3.86
234	235	3.691342	CTTCGGTCCGCTGGTCCA	61.691	66.667	6.34	0.00	30.37	4.02
235	236	4.452733	CCTTCGGTCCGCTGGTCC	62.453	72.222	6.34	1.87	0.00	4.46
259	260	4.953868	TCGTGACGCCGGTTGTGG	62.954	66.667	1.90	0.00	0.00	4.17
260	261	3.698463	GTCGTGACGCCGGTTGTG	61.698	66.667	1.90	0.00	0.00	3.33
270	271	1.862008	GCTCAGATCCATCGTCGTGAC	60.862	57.143	0.00	0.00	0.00	3.67
271	272	0.382158	GCTCAGATCCATCGTCGTGA	59.618	55.000	0.00	0.00	0.00	4.35
272	273	0.383590	AGCTCAGATCCATCGTCGTG	59.616	55.000	0.00	0.00	0.00	4.35
273	274	0.383590	CAGCTCAGATCCATCGTCGT	59.616	55.000	0.00	0.00	0.00	4.34
274	275	0.318529	CCAGCTCAGATCCATCGTCG	60.319	60.000	0.00	0.00	0.00	5.12
275	276	0.033228	CCCAGCTCAGATCCATCGTC	59.967	60.000	0.00	0.00	0.00	4.20
276	277	1.406065	CCCCAGCTCAGATCCATCGT	61.406	60.000	0.00	0.00	0.00	3.73
277	278	1.370437	CCCCAGCTCAGATCCATCG	59.630	63.158	0.00	0.00	0.00	3.84
278	279	1.759881	CCCCCAGCTCAGATCCATC	59.240	63.158	0.00	0.00	0.00	3.51
279	280	2.459086	GCCCCCAGCTCAGATCCAT	61.459	63.158	0.00	0.00	38.99	3.41
280	281	3.092511	GCCCCCAGCTCAGATCCA	61.093	66.667	0.00	0.00	38.99	3.41
281	282	4.247380	CGCCCCCAGCTCAGATCC	62.247	72.222	0.00	0.00	40.39	3.36
282	283	4.247380	CCGCCCCCAGCTCAGATC	62.247	72.222	0.00	0.00	40.39	2.75
308	309	4.479993	ATGCTCTGCCCGTCCTGC	62.480	66.667	0.00	0.00	0.00	4.85
309	310	2.513204	CATGCTCTGCCCGTCCTG	60.513	66.667	0.00	0.00	0.00	3.86
310	311	4.479993	GCATGCTCTGCCCGTCCT	62.480	66.667	11.37	0.00	45.66	3.85
318	319	2.172372	GCGTCTGGAGCATGCTCTG	61.172	63.158	38.84	31.18	42.38	3.35
319	320	2.186384	GCGTCTGGAGCATGCTCT	59.814	61.111	38.84	13.65	42.38	4.09
320	321	3.260483	CGCGTCTGGAGCATGCTC	61.260	66.667	34.99	34.99	42.04	4.26
321	322	4.827087	CCGCGTCTGGAGCATGCT	62.827	66.667	22.92	22.92	34.19	3.79
339	340	4.570663	CCTACTTCCTCGCCGGCG	62.571	72.222	42.13	42.13	41.35	6.46
340	341	4.222847	CCCTACTTCCTCGCCGGC	62.223	72.222	19.07	19.07	0.00	6.13
341	342	3.537874	CCCCTACTTCCTCGCCGG	61.538	72.222	0.00	0.00	0.00	6.13
342	343	2.441532	TCCCCTACTTCCTCGCCG	60.442	66.667	0.00	0.00	0.00	6.46
343	344	2.134933	CCTCCCCTACTTCCTCGCC	61.135	68.421	0.00	0.00	0.00	5.54
344	345	0.686769	TTCCTCCCCTACTTCCTCGC	60.687	60.000	0.00	0.00	0.00	5.03
345	346	1.757699	CTTTCCTCCCCTACTTCCTCG	59.242	57.143	0.00	0.00	0.00	4.63
346	347	1.487142	GCTTTCCTCCCCTACTTCCTC	59.513	57.143	0.00	0.00	0.00	3.71
347	348	1.081343	AGCTTTCCTCCCCTACTTCCT	59.919	52.381	0.00	0.00	0.00	3.36
348	349	1.487142	GAGCTTTCCTCCCCTACTTCC	59.513	57.143	0.00	0.00	34.35	3.46
349	350	2.992124	GAGCTTTCCTCCCCTACTTC	57.008	55.000	0.00	0.00	34.35	3.01
358	359	1.139947	CCTCGTCGGAGCTTTCCTC	59.860	63.158	0.00	0.00	39.06	3.71
359	360	1.304217	TCCTCGTCGGAGCTTTCCT	60.304	57.895	0.00	0.00	39.06	3.36
360	361	3.285371	TCCTCGTCGGAGCTTTCC	58.715	61.111	0.00	0.00	39.06	3.13
368	369	4.271816	CCGGCTCATCCTCGTCGG	62.272	72.222	0.00	0.00	0.00	4.79
369	370	3.209812	TCCGGCTCATCCTCGTCG	61.210	66.667	0.00	0.00	0.00	5.12
370	371	2.343163	CTGTCCGGCTCATCCTCGTC	62.343	65.000	0.00	0.00	0.00	4.20
371	372	2.362503	TGTCCGGCTCATCCTCGT	60.363	61.111	0.00	0.00	0.00	4.18
372	373	2.069465	CTCTGTCCGGCTCATCCTCG	62.069	65.000	0.00	0.00	0.00	4.63
373	374	0.753479	TCTCTGTCCGGCTCATCCTC	60.753	60.000	0.00	0.00	0.00	3.71
374	375	0.324738	TTCTCTGTCCGGCTCATCCT	60.325	55.000	0.00	0.00	0.00	3.24
375	376	0.537188	TTTCTCTGTCCGGCTCATCC	59.463	55.000	0.00	0.00	0.00	3.51
376	377	1.646189	GTTTCTCTGTCCGGCTCATC	58.354	55.000	0.00	0.00	0.00	2.92
377	378	0.250513	GGTTTCTCTGTCCGGCTCAT	59.749	55.000	0.00	0.00	0.00	2.90
378	379	1.671742	GGTTTCTCTGTCCGGCTCA	59.328	57.895	0.00	0.00	0.00	4.26
379	380	1.079057	GGGTTTCTCTGTCCGGCTC	60.079	63.158	0.00	0.00	0.00	4.70
380	381	2.943978	CGGGTTTCTCTGTCCGGCT	61.944	63.158	0.00	0.00	38.93	5.52
381	382	2.434359	CGGGTTTCTCTGTCCGGC	60.434	66.667	0.00	0.00	38.93	6.13
382	383	2.434359	GCGGGTTTCTCTGTCCGG	60.434	66.667	0.00	0.00	42.43	5.14
383	384	2.758770	TTCGCGGGTTTCTCTGTCCG	62.759	60.000	6.13	0.00	44.70	4.79
384	385	1.005394	TTCGCGGGTTTCTCTGTCC	60.005	57.895	6.13	0.00	0.00	4.02
385	386	1.627550	GCTTCGCGGGTTTCTCTGTC	61.628	60.000	6.13	0.00	0.00	3.51
386	387	1.668151	GCTTCGCGGGTTTCTCTGT	60.668	57.895	6.13	0.00	0.00	3.41
387	388	2.391389	GGCTTCGCGGGTTTCTCTG	61.391	63.158	6.13	0.00	0.00	3.35
388	389	2.047179	GGCTTCGCGGGTTTCTCT	60.047	61.111	6.13	0.00	0.00	3.10
389	390	1.745489	ATGGCTTCGCGGGTTTCTC	60.745	57.895	6.13	0.00	0.00	2.87
390	391	2.040544	CATGGCTTCGCGGGTTTCT	61.041	57.895	6.13	0.00	0.00	2.52
391	392	2.485122	CATGGCTTCGCGGGTTTC	59.515	61.111	6.13	0.00	0.00	2.78
392	393	3.061848	CCATGGCTTCGCGGGTTT	61.062	61.111	6.13	0.00	0.00	3.27
484	485	3.842925	TTTCTCCCACACAGCCGGC	62.843	63.158	21.89	21.89	0.00	6.13
485	486	1.672356	CTTTCTCCCACACAGCCGG	60.672	63.158	0.00	0.00	0.00	6.13
486	487	2.328099	GCTTTCTCCCACACAGCCG	61.328	63.158	0.00	0.00	0.00	5.52
487	488	1.228245	TGCTTTCTCCCACACAGCC	60.228	57.895	0.00	0.00	0.00	4.85
488	489	0.536006	AGTGCTTTCTCCCACACAGC	60.536	55.000	0.00	0.00	35.47	4.40
489	490	1.233019	CAGTGCTTTCTCCCACACAG	58.767	55.000	0.00	0.00	35.47	3.66
490	491	0.819259	GCAGTGCTTTCTCCCACACA	60.819	55.000	8.18	0.00	35.47	3.72
491	492	1.845809	CGCAGTGCTTTCTCCCACAC	61.846	60.000	14.33	0.00	34.48	3.82
492	493	1.597854	CGCAGTGCTTTCTCCCACA	60.598	57.895	14.33	0.00	34.48	4.17
493	494	0.320421	TACGCAGTGCTTTCTCCCAC	60.320	55.000	14.33	0.00	45.73	4.61
494	495	0.394938	TTACGCAGTGCTTTCTCCCA	59.605	50.000	14.33	0.00	45.73	4.37
495	496	1.519408	TTTACGCAGTGCTTTCTCCC	58.481	50.000	14.33	0.00	45.73	4.30
496	497	3.831715	ATTTTACGCAGTGCTTTCTCC	57.168	42.857	14.33	0.00	45.73	3.71
497	498	5.532025	AGTATTTTACGCAGTGCTTTCTC	57.468	39.130	14.33	0.00	45.73	2.87
498	499	5.468746	TCAAGTATTTTACGCAGTGCTTTCT	59.531	36.000	14.33	0.00	45.73	2.52
499	500	5.685841	TCAAGTATTTTACGCAGTGCTTTC	58.314	37.500	14.33	0.00	45.73	2.62
500	501	5.682943	TCAAGTATTTTACGCAGTGCTTT	57.317	34.783	14.33	2.19	45.73	3.51
501	502	5.238650	AGTTCAAGTATTTTACGCAGTGCTT	59.761	36.000	14.33	6.42	45.73	3.91
502	503	4.755123	AGTTCAAGTATTTTACGCAGTGCT	59.245	37.500	14.33	2.88	45.73	4.40
503	504	5.030874	AGTTCAAGTATTTTACGCAGTGC	57.969	39.130	4.58	4.58	45.73	4.40
504	505	9.901724	CTTATAGTTCAAGTATTTTACGCAGTG	57.098	33.333	0.00	0.00	45.73	3.66
507	508	8.814235	GCTCTTATAGTTCAAGTATTTTACGCA	58.186	33.333	0.00	0.00	0.00	5.24
508	509	8.814235	TGCTCTTATAGTTCAAGTATTTTACGC	58.186	33.333	0.00	0.00	0.00	4.42
513	514	9.384764	GGAGTTGCTCTTATAGTTCAAGTATTT	57.615	33.333	0.00	0.00	0.00	1.40
514	515	8.540388	TGGAGTTGCTCTTATAGTTCAAGTATT	58.460	33.333	0.00	0.00	0.00	1.89
515	516	8.079211	TGGAGTTGCTCTTATAGTTCAAGTAT	57.921	34.615	0.00	0.00	0.00	2.12
516	517	7.476540	TGGAGTTGCTCTTATAGTTCAAGTA	57.523	36.000	0.00	0.00	0.00	2.24
517	518	6.360370	TGGAGTTGCTCTTATAGTTCAAGT	57.640	37.500	0.00	0.00	0.00	3.16
518	519	7.201679	CCATTGGAGTTGCTCTTATAGTTCAAG	60.202	40.741	0.00	0.00	0.00	3.02
519	520	6.599244	CCATTGGAGTTGCTCTTATAGTTCAA	59.401	38.462	0.00	0.00	0.00	2.69
520	521	6.070251	TCCATTGGAGTTGCTCTTATAGTTCA	60.070	38.462	0.00	0.00	0.00	3.18
521	522	6.349300	TCCATTGGAGTTGCTCTTATAGTTC	58.651	40.000	0.00	0.00	0.00	3.01
522	523	6.313519	TCCATTGGAGTTGCTCTTATAGTT	57.686	37.500	0.00	0.00	0.00	2.24
523	524	5.923204	CTCCATTGGAGTTGCTCTTATAGT	58.077	41.667	22.45	0.00	44.25	2.12
543	544	1.212616	CAGACGAAATGGATCGCTCC	58.787	55.000	0.00	0.00	46.51	4.70
544	545	0.579156	GCAGACGAAATGGATCGCTC	59.421	55.000	0.00	0.00	46.51	5.03
545	546	0.811616	GGCAGACGAAATGGATCGCT	60.812	55.000	0.00	0.00	46.51	4.93
546	547	1.643832	GGCAGACGAAATGGATCGC	59.356	57.895	0.00	0.00	46.51	4.58
557	558	2.594962	AAACGAACAGCGGCAGACG	61.595	57.895	1.45	8.75	46.49	4.18
558	559	1.082756	CAAACGAACAGCGGCAGAC	60.083	57.895	1.45	0.00	46.49	3.51
559	560	2.250939	CCAAACGAACAGCGGCAGA	61.251	57.895	1.45	0.00	46.49	4.26
560	561	2.252260	CCAAACGAACAGCGGCAG	59.748	61.111	1.45	0.00	46.49	4.85
561	562	3.283684	CCCAAACGAACAGCGGCA	61.284	61.111	1.45	0.00	46.49	5.69
562	563	3.249973	GACCCAAACGAACAGCGGC	62.250	63.158	0.00	0.00	46.49	6.53
563	564	2.943653	GACCCAAACGAACAGCGG	59.056	61.111	0.00	0.00	46.49	5.52
565	566	2.943653	CCGACCCAAACGAACAGC	59.056	61.111	0.00	0.00	0.00	4.40
566	567	2.943653	GCCGACCCAAACGAACAG	59.056	61.111	0.00	0.00	0.00	3.16
567	568	2.968156	CGCCGACCCAAACGAACA	60.968	61.111	0.00	0.00	0.00	3.18
568	569	4.379143	GCGCCGACCCAAACGAAC	62.379	66.667	0.00	0.00	0.00	3.95
577	578	4.084888	CTTTTGTCCGCGCCGACC	62.085	66.667	23.06	8.48	31.35	4.79
578	579	3.011760	CTCTTTTGTCCGCGCCGAC	62.012	63.158	20.04	20.04	0.00	4.79
579	580	2.736995	CTCTTTTGTCCGCGCCGA	60.737	61.111	0.00	0.00	0.00	5.54
580	581	3.788766	CCTCTTTTGTCCGCGCCG	61.789	66.667	0.00	0.00	0.00	6.46
581	582	2.358247	TCCTCTTTTGTCCGCGCC	60.358	61.111	0.00	0.00	0.00	6.53
582	583	2.391389	CCTCCTCTTTTGTCCGCGC	61.391	63.158	0.00	0.00	0.00	6.86
583	584	2.391389	GCCTCCTCTTTTGTCCGCG	61.391	63.158	0.00	0.00	0.00	6.46
584	585	1.003233	AGCCTCCTCTTTTGTCCGC	60.003	57.895	0.00	0.00	0.00	5.54
585	586	0.321671	TGAGCCTCCTCTTTTGTCCG	59.678	55.000	0.00	0.00	38.93	4.79
586	587	2.155279	GTTGAGCCTCCTCTTTTGTCC	58.845	52.381	0.00	0.00	38.93	4.02
587	588	1.801178	CGTTGAGCCTCCTCTTTTGTC	59.199	52.381	0.00	0.00	38.93	3.18
588	589	1.884235	CGTTGAGCCTCCTCTTTTGT	58.116	50.000	0.00	0.00	38.93	2.83
589	590	0.519077	GCGTTGAGCCTCCTCTTTTG	59.481	55.000	0.00	0.00	40.81	2.44
590	591	0.951040	CGCGTTGAGCCTCCTCTTTT	60.951	55.000	0.00	0.00	44.76	2.27
591	592	1.374758	CGCGTTGAGCCTCCTCTTT	60.375	57.895	0.00	0.00	44.76	2.52
592	593	2.262915	CGCGTTGAGCCTCCTCTT	59.737	61.111	0.00	0.00	44.76	2.85
593	594	4.443266	GCGCGTTGAGCCTCCTCT	62.443	66.667	8.43	0.00	44.76	3.69
601	602	2.876879	TTTGTGTCGGCGCGTTGAG	61.877	57.895	8.43	0.00	0.00	3.02
602	603	2.890961	TTTGTGTCGGCGCGTTGA	60.891	55.556	8.43	2.59	0.00	3.18
603	604	2.720750	GTTTGTGTCGGCGCGTTG	60.721	61.111	8.43	0.00	0.00	4.10
604	605	3.944233	GGTTTGTGTCGGCGCGTT	61.944	61.111	8.43	0.00	0.00	4.84
606	607	2.725275	ATTTGGTTTGTGTCGGCGCG	62.725	55.000	0.00	0.00	0.00	6.86
607	608	1.001745	GATTTGGTTTGTGTCGGCGC	61.002	55.000	0.00	0.00	0.00	6.53
608	609	0.309302	TGATTTGGTTTGTGTCGGCG	59.691	50.000	0.00	0.00	0.00	6.46
609	610	2.288152	ACATGATTTGGTTTGTGTCGGC	60.288	45.455	0.00	0.00	0.00	5.54
610	611	3.564511	GACATGATTTGGTTTGTGTCGG	58.435	45.455	0.00	0.00	0.00	4.79
611	612	3.564511	GGACATGATTTGGTTTGTGTCG	58.435	45.455	0.00	0.00	37.44	4.35
612	613	3.564511	CGGACATGATTTGGTTTGTGTC	58.435	45.455	0.00	0.00	36.22	3.67
613	614	2.288152	GCGGACATGATTTGGTTTGTGT	60.288	45.455	0.00	0.00	0.00	3.72
614	615	2.030007	AGCGGACATGATTTGGTTTGTG	60.030	45.455	0.00	0.00	0.00	3.33
615	616	2.238521	AGCGGACATGATTTGGTTTGT	58.761	42.857	0.00	0.00	0.00	2.83
616	617	3.244976	GAAGCGGACATGATTTGGTTTG	58.755	45.455	0.00	0.00	0.00	2.93
617	618	2.095263	CGAAGCGGACATGATTTGGTTT	60.095	45.455	0.00	0.00	0.00	3.27
618	619	1.468520	CGAAGCGGACATGATTTGGTT	59.531	47.619	0.00	0.00	0.00	3.67
619	620	1.086696	CGAAGCGGACATGATTTGGT	58.913	50.000	0.00	0.00	0.00	3.67
620	621	1.086696	ACGAAGCGGACATGATTTGG	58.913	50.000	0.00	0.00	0.00	3.28
621	622	1.464608	ACACGAAGCGGACATGATTTG	59.535	47.619	0.00	0.00	0.00	2.32
622	623	1.732259	GACACGAAGCGGACATGATTT	59.268	47.619	0.00	0.00	0.00	2.17
623	624	1.359848	GACACGAAGCGGACATGATT	58.640	50.000	0.00	0.00	0.00	2.57
624	625	0.460284	GGACACGAAGCGGACATGAT	60.460	55.000	0.00	0.00	0.00	2.45
625	626	1.080093	GGACACGAAGCGGACATGA	60.080	57.895	0.00	0.00	0.00	3.07
626	627	2.444624	CGGACACGAAGCGGACATG	61.445	63.158	0.00	0.00	44.60	3.21
627	628	2.126071	CGGACACGAAGCGGACAT	60.126	61.111	0.00	0.00	44.60	3.06
628	629	3.598715	ACGGACACGAAGCGGACA	61.599	61.111	0.00	0.00	44.60	4.02
629	630	3.103911	CACGGACACGAAGCGGAC	61.104	66.667	0.00	0.00	44.60	4.79
630	631	3.547249	GACACGGACACGAAGCGGA	62.547	63.158	0.00	0.00	44.60	5.54
631	632	3.103911	GACACGGACACGAAGCGG	61.104	66.667	0.00	0.00	44.60	5.52
632	633	3.458579	CGACACGGACACGAAGCG	61.459	66.667	0.00	0.00	44.60	4.68
633	634	2.050714	TCGACACGGACACGAAGC	60.051	61.111	0.00	0.00	44.60	3.86
634	635	2.073220	CGTCGACACGGACACGAAG	61.073	63.158	17.16	0.00	44.60	3.79
635	636	2.051971	CGTCGACACGGACACGAA	60.052	61.111	17.16	0.00	44.60	3.85
636	637	4.671549	GCGTCGACACGGACACGA	62.672	66.667	17.16	0.00	46.80	4.35
637	638	4.967730	TGCGTCGACACGGACACG	62.968	66.667	17.16	0.00	46.80	4.49
642	643	2.202171	GCAAATGCGTCGACACGG	60.202	61.111	17.16	0.00	46.80	4.94
644	645	0.041312	AAGTGCAAATGCGTCGACAC	60.041	50.000	17.16	6.48	45.83	3.67
645	646	1.503294	TAAGTGCAAATGCGTCGACA	58.497	45.000	17.16	0.00	45.83	4.35
646	647	2.587612	TTAAGTGCAAATGCGTCGAC	57.412	45.000	5.18	5.18	45.83	4.20
647	648	3.822594	ATTTAAGTGCAAATGCGTCGA	57.177	38.095	0.00	0.00	45.83	4.20
648	649	4.617328	CAAATTTAAGTGCAAATGCGTCG	58.383	39.130	0.35	0.00	45.83	5.12
649	650	4.385379	GCAAATTTAAGTGCAAATGCGTC	58.615	39.130	0.35	0.00	45.83	5.19
650	651	3.121058	CGCAAATTTAAGTGCAAATGCGT	60.121	39.130	8.48	0.00	45.83	5.24
651	652	3.397441	CGCAAATTTAAGTGCAAATGCG	58.603	40.909	2.35	2.35	45.83	4.73
652	653	3.155243	GCGCAAATTTAAGTGCAAATGC	58.845	40.909	0.30	0.00	40.94	3.56
653	654	3.424697	GGGCGCAAATTTAAGTGCAAATG	60.425	43.478	10.83	0.00	42.73	2.32
654	655	2.741517	GGGCGCAAATTTAAGTGCAAAT	59.258	40.909	10.83	0.00	42.73	2.32
655	656	2.139118	GGGCGCAAATTTAAGTGCAAA	58.861	42.857	10.83	0.00	42.73	3.68
656	657	1.606737	GGGGCGCAAATTTAAGTGCAA	60.607	47.619	10.83	0.00	42.73	4.08
657	658	0.037790	GGGGCGCAAATTTAAGTGCA	60.038	50.000	10.83	0.00	42.73	4.57
658	659	0.037790	TGGGGCGCAAATTTAAGTGC	60.038	50.000	10.83	5.69	40.36	4.40
659	660	2.447244	TTGGGGCGCAAATTTAAGTG	57.553	45.000	15.15	0.00	0.00	3.16
660	661	2.367241	ACTTTGGGGCGCAAATTTAAGT	59.633	40.909	26.86	18.80	0.00	2.24
661	662	3.038788	ACTTTGGGGCGCAAATTTAAG	57.961	42.857	26.86	18.20	0.00	1.85
662	663	3.477210	AACTTTGGGGCGCAAATTTAA	57.523	38.095	26.86	7.72	0.00	1.52
663	664	3.321111	TGTAACTTTGGGGCGCAAATTTA	59.679	39.130	26.86	26.05	0.00	1.40
664	665	2.103263	TGTAACTTTGGGGCGCAAATTT	59.897	40.909	27.03	27.03	0.00	1.82
665	666	1.689273	TGTAACTTTGGGGCGCAAATT	59.311	42.857	26.86	19.92	0.00	1.82
666	667	1.000394	GTGTAACTTTGGGGCGCAAAT	60.000	47.619	26.86	17.11	0.00	2.32
667	668	0.386113	GTGTAACTTTGGGGCGCAAA	59.614	50.000	25.41	25.41	0.00	3.68
668	669	0.752009	TGTGTAACTTTGGGGCGCAA	60.752	50.000	13.46	13.46	38.04	4.85
669	670	1.152943	TGTGTAACTTTGGGGCGCA	60.153	52.632	10.83	0.00	38.04	6.09
670	671	1.284715	GTGTGTAACTTTGGGGCGC	59.715	57.895	0.00	0.00	38.04	6.53
671	672	0.591170	CTGTGTGTAACTTTGGGGCG	59.409	55.000	0.00	0.00	38.04	6.13
672	673	1.975660	TCTGTGTGTAACTTTGGGGC	58.024	50.000	0.00	0.00	38.04	5.80
673	674	6.350110	CCAAATATCTGTGTGTAACTTTGGGG	60.350	42.308	0.00	0.00	38.33	4.96
674	675	6.620678	CCAAATATCTGTGTGTAACTTTGGG	58.379	40.000	0.00	0.00	38.33	4.12
675	676	6.208599	ACCCAAATATCTGTGTGTAACTTTGG	59.791	38.462	0.00	0.00	40.51	3.28
676	677	7.214467	ACCCAAATATCTGTGTGTAACTTTG	57.786	36.000	0.00	0.00	38.04	2.77
677	678	7.308348	CGAACCCAAATATCTGTGTGTAACTTT	60.308	37.037	0.00	0.00	38.04	2.66
678	679	6.148811	CGAACCCAAATATCTGTGTGTAACTT	59.851	38.462	0.00	0.00	38.04	2.66
679	680	5.642063	CGAACCCAAATATCTGTGTGTAACT	59.358	40.000	0.00	0.00	38.04	2.24
680	681	5.163794	CCGAACCCAAATATCTGTGTGTAAC	60.164	44.000	0.00	0.00	37.35	2.50
681	682	4.938832	CCGAACCCAAATATCTGTGTGTAA	59.061	41.667	0.00	0.00	0.00	2.41
682	683	4.020039	ACCGAACCCAAATATCTGTGTGTA	60.020	41.667	0.00	0.00	0.00	2.90
683	684	3.244770	ACCGAACCCAAATATCTGTGTGT	60.245	43.478	0.00	0.00	0.00	3.72
684	685	3.343617	ACCGAACCCAAATATCTGTGTG	58.656	45.455	0.00	0.00	0.00	3.82
685	686	3.263425	AGACCGAACCCAAATATCTGTGT	59.737	43.478	0.00	0.00	0.00	3.72
686	687	3.623060	CAGACCGAACCCAAATATCTGTG	59.377	47.826	0.00	0.00	0.00	3.66
687	688	3.263425	ACAGACCGAACCCAAATATCTGT	59.737	43.478	0.00	0.00	40.26	3.41
688	689	3.873910	ACAGACCGAACCCAAATATCTG	58.126	45.455	0.00	0.00	38.42	2.90
689	690	4.261801	CAACAGACCGAACCCAAATATCT	58.738	43.478	0.00	0.00	0.00	1.98
690	691	3.377172	CCAACAGACCGAACCCAAATATC	59.623	47.826	0.00	0.00	0.00	1.63
691	692	3.245122	ACCAACAGACCGAACCCAAATAT	60.245	43.478	0.00	0.00	0.00	1.28
692	693	2.106857	ACCAACAGACCGAACCCAAATA	59.893	45.455	0.00	0.00	0.00	1.40
693	694	1.133606	ACCAACAGACCGAACCCAAAT	60.134	47.619	0.00	0.00	0.00	2.32
694	695	0.256464	ACCAACAGACCGAACCCAAA	59.744	50.000	0.00	0.00	0.00	3.28
695	696	0.256464	AACCAACAGACCGAACCCAA	59.744	50.000	0.00	0.00	0.00	4.12
696	697	0.179040	GAACCAACAGACCGAACCCA	60.179	55.000	0.00	0.00	0.00	4.51
697	698	1.226030	CGAACCAACAGACCGAACCC	61.226	60.000	0.00	0.00	0.00	4.11
698	699	1.226030	CCGAACCAACAGACCGAACC	61.226	60.000	0.00	0.00	0.00	3.62
699	700	1.838568	GCCGAACCAACAGACCGAAC	61.839	60.000	0.00	0.00	0.00	3.95
700	701	1.595929	GCCGAACCAACAGACCGAA	60.596	57.895	0.00	0.00	0.00	4.30
701	702	2.029964	GCCGAACCAACAGACCGA	59.970	61.111	0.00	0.00	0.00	4.69
702	703	0.320073	TAAGCCGAACCAACAGACCG	60.320	55.000	0.00	0.00	0.00	4.79
703	704	1.154197	GTAAGCCGAACCAACAGACC	58.846	55.000	0.00	0.00	0.00	3.85
706	707	3.315765	TGGTAAGCCGAACCAACAG	57.684	52.632	0.14	0.00	43.99	3.16
721	722	2.041216	GTCCACCCCTTCTAAACATGGT	59.959	50.000	0.00	0.00	0.00	3.55
734	735	1.489230	ACGGAGATATTTGTCCACCCC	59.511	52.381	0.41	0.00	34.95	4.95
736	737	3.800506	CGTAACGGAGATATTTGTCCACC	59.199	47.826	0.41	0.00	34.95	4.61
774	775	2.559330	CGCGGAAGGAAAAACCCG	59.441	61.111	0.00	0.00	44.34	5.28
776	777	2.632544	CCCCGCGGAAGGAAAAACC	61.633	63.158	30.73	0.00	39.35	3.27
780	781	3.912745	GAAGCCCCGCGGAAGGAAA	62.913	63.158	30.73	0.00	0.00	3.13
781	782	4.404098	GAAGCCCCGCGGAAGGAA	62.404	66.667	30.73	0.00	0.00	3.36
805	829	3.712881	GTGCCACGTCGTCCAAGC	61.713	66.667	0.00	0.00	0.00	4.01
808	832	4.337060	CTCGTGCCACGTCGTCCA	62.337	66.667	17.83	0.00	43.14	4.02
848	872	2.327568	CGAGGCAACAAAAATCGCAAT	58.672	42.857	0.00	0.00	41.41	3.56
888	918	1.071228	ACGCTCGGTATTTATTCCCCC	59.929	52.381	0.00	0.00	0.00	5.40
946	976	4.741239	GTGGGCTGGAGGGAGGGA	62.741	72.222	0.00	0.00	0.00	4.20
1101	1152	4.767255	AAGAAGCCCAGCGCCGAG	62.767	66.667	2.29	0.00	38.78	4.63
1110	1161	1.153147	GGATCCACCGAAGAAGCCC	60.153	63.158	6.95	0.00	0.00	5.19
1216	1273	2.131709	CGTGCGATTAGGGGGAGGA	61.132	63.158	0.00	0.00	0.00	3.71
1243	1302	5.534278	TGTTAATCAATCAAACAGGACAGCA	59.466	36.000	0.00	0.00	0.00	4.41
1269	1335	6.851837	GCTATGTCAGATACAGTAGTTACGTG	59.148	42.308	0.00	0.00	42.70	4.49
1277	1343	4.448060	CGTCGAGCTATGTCAGATACAGTA	59.552	45.833	0.00	0.00	42.70	2.74
1278	1344	3.248841	CGTCGAGCTATGTCAGATACAGT	59.751	47.826	0.00	0.00	42.70	3.55
1279	1345	3.248841	ACGTCGAGCTATGTCAGATACAG	59.751	47.826	0.00	0.00	42.70	2.74
1280	1346	3.203716	ACGTCGAGCTATGTCAGATACA	58.796	45.455	0.00	0.00	43.86	2.29
1281	1347	3.881780	ACGTCGAGCTATGTCAGATAC	57.118	47.619	0.00	0.00	0.00	2.24
1288	1354	3.795623	AATTGGTACGTCGAGCTATGT	57.204	42.857	0.00	0.00	0.00	2.29
1290	1356	5.762218	ACTACTAATTGGTACGTCGAGCTAT	59.238	40.000	0.00	0.00	0.00	2.97
1315	1389	9.589461	AGTATCTGTACTGCTACTGGTATAATT	57.411	33.333	13.49	0.00	39.66	1.40
1650	1731	4.553938	CGACCTGTTAGCACGTGAATTTTT	60.554	41.667	22.23	0.00	0.00	1.94
1651	1732	3.059188	CGACCTGTTAGCACGTGAATTTT	60.059	43.478	22.23	0.86	0.00	1.82
1652	1733	2.478894	CGACCTGTTAGCACGTGAATTT	59.521	45.455	22.23	3.55	0.00	1.82
1653	1734	2.066262	CGACCTGTTAGCACGTGAATT	58.934	47.619	22.23	6.30	0.00	2.17
1654	1735	1.271379	TCGACCTGTTAGCACGTGAAT	59.729	47.619	22.23	9.50	0.00	2.57
1774	1859	2.626088	AACGCTCTAACTACACCGAC	57.374	50.000	0.00	0.00	0.00	4.79
1777	1862	4.565564	CACCATTAACGCTCTAACTACACC	59.434	45.833	0.00	0.00	0.00	4.16
1780	1865	3.554731	GCCACCATTAACGCTCTAACTAC	59.445	47.826	0.00	0.00	0.00	2.73
1784	1869	2.352388	GTGCCACCATTAACGCTCTAA	58.648	47.619	0.00	0.00	0.00	2.10
1786	1871	0.676782	GGTGCCACCATTAACGCTCT	60.677	55.000	9.55	0.00	38.42	4.09
1787	1872	0.676782	AGGTGCCACCATTAACGCTC	60.677	55.000	17.80	0.00	41.95	5.03
1788	1873	0.251165	AAGGTGCCACCATTAACGCT	60.251	50.000	17.80	0.00	41.95	5.07
1789	1874	0.170339	GAAGGTGCCACCATTAACGC	59.830	55.000	17.80	0.00	41.95	4.84
1790	1875	0.446222	CGAAGGTGCCACCATTAACG	59.554	55.000	17.80	9.83	41.95	3.18
1791	1876	1.467342	GACGAAGGTGCCACCATTAAC	59.533	52.381	17.80	0.61	41.95	2.01
1792	1877	1.349688	AGACGAAGGTGCCACCATTAA	59.650	47.619	17.80	0.00	41.95	1.40
1793	1878	0.981183	AGACGAAGGTGCCACCATTA	59.019	50.000	17.80	0.00	41.95	1.90
1806	1915	3.314080	ACGCTTTCAAAATGGAAGACGAA	59.686	39.130	16.49	0.00	33.70	3.85
1809	1918	5.629435	CCTTAACGCTTTCAAAATGGAAGAC	59.371	40.000	2.56	0.00	0.00	3.01
1847	1961	9.367160	ACCATGGTTTCTAATATTATTGAAGGG	57.633	33.333	13.00	0.00	0.00	3.95
1851	1965	8.995027	AGCACCATGGTTTCTAATATTATTGA	57.005	30.769	16.84	0.00	0.00	2.57
1859	1973	2.497273	GGCAAGCACCATGGTTTCTAAT	59.503	45.455	16.84	0.00	35.69	1.73
1860	1974	1.892474	GGCAAGCACCATGGTTTCTAA	59.108	47.619	16.84	0.00	35.69	2.10
1867	1981	0.974010	ATCAAGGGCAAGCACCATGG	60.974	55.000	11.19	11.19	0.00	3.66
1868	1982	0.899720	AATCAAGGGCAAGCACCATG	59.100	50.000	0.00	0.00	0.00	3.66
1869	1983	1.188863	GAATCAAGGGCAAGCACCAT	58.811	50.000	0.00	0.00	0.00	3.55
1870	1984	0.899717	GGAATCAAGGGCAAGCACCA	60.900	55.000	0.00	0.00	0.00	4.17
1871	1985	0.613012	AGGAATCAAGGGCAAGCACC	60.613	55.000	0.00	0.00	0.00	5.01
1872	1986	1.260544	AAGGAATCAAGGGCAAGCAC	58.739	50.000	0.00	0.00	0.00	4.40
1873	1987	2.014010	AAAGGAATCAAGGGCAAGCA	57.986	45.000	0.00	0.00	0.00	3.91
1874	1988	2.159379	CGTAAAGGAATCAAGGGCAAGC	60.159	50.000	0.00	0.00	0.00	4.01
1875	1989	3.081804	ACGTAAAGGAATCAAGGGCAAG	58.918	45.455	0.00	0.00	0.00	4.01
1876	1990	3.078837	GACGTAAAGGAATCAAGGGCAA	58.921	45.455	0.00	0.00	0.00	4.52
1877	1991	2.039216	TGACGTAAAGGAATCAAGGGCA	59.961	45.455	0.00	0.00	0.00	5.36
1878	1992	2.706890	TGACGTAAAGGAATCAAGGGC	58.293	47.619	0.00	0.00	0.00	5.19
1892	2006	6.018098	ACGTGGTATCAACAAATTTTGACGTA	60.018	34.615	15.81	1.30	38.31	3.57
1895	2009	5.338559	CGACGTGGTATCAACAAATTTTGAC	59.661	40.000	15.81	3.13	38.31	3.18
1897	2011	5.444983	TCGACGTGGTATCAACAAATTTTG	58.555	37.500	7.59	7.59	0.00	2.44
1924	2039	6.924111	ACAAAACATAGCATAGGAAAAGTGG	58.076	36.000	0.00	0.00	0.00	4.00
1933	2048	9.755064	GTACAACAGTAACAAAACATAGCATAG	57.245	33.333	0.00	0.00	0.00	2.23
1964	2079	8.543862	ACAAAAACATACCGGTTTTAACAAAA	57.456	26.923	15.04	0.00	46.99	2.44
1965	2080	8.440833	CAACAAAAACATACCGGTTTTAACAAA	58.559	29.630	15.04	0.00	46.99	2.83
1966	2081	7.816031	TCAACAAAAACATACCGGTTTTAACAA	59.184	29.630	15.04	0.00	46.99	2.83
1967	2082	7.318141	TCAACAAAAACATACCGGTTTTAACA	58.682	30.769	15.04	0.00	46.99	2.41
1968	2083	7.752557	TCAACAAAAACATACCGGTTTTAAC	57.247	32.000	15.04	0.00	46.99	2.01
1969	2084	8.943909	ATTCAACAAAAACATACCGGTTTTAA	57.056	26.923	15.04	0.00	46.99	1.52
1970	2085	8.943909	AATTCAACAAAAACATACCGGTTTTA	57.056	26.923	15.04	0.00	46.99	1.52
1972	2087	7.042335	TGAATTCAACAAAAACATACCGGTTT	58.958	30.769	15.04	0.14	42.49	3.27
1973	2088	6.574350	TGAATTCAACAAAAACATACCGGTT	58.426	32.000	15.04	0.00	0.00	4.44
1974	2089	6.150396	TGAATTCAACAAAAACATACCGGT	57.850	33.333	13.98	13.98	0.00	5.28
1975	2090	7.650834	AATGAATTCAACAAAAACATACCGG	57.349	32.000	13.09	0.00	0.00	5.28
1981	2096	9.388506	ACCATGTAAATGAATTCAACAAAAACA	57.611	25.926	13.09	11.14	0.00	2.83
1997	2112	7.966204	GTGCAATAGTAACGAAACCATGTAAAT	59.034	33.333	0.00	0.00	0.00	1.40
2001	2116	5.001232	AGTGCAATAGTAACGAAACCATGT	58.999	37.500	0.00	0.00	0.00	3.21
2108	2236	3.798337	CACATCAAAGTTGTCCTGCAAAC	59.202	43.478	0.00	0.00	39.03	2.93
2467	2595	1.346068	GAGTGCTTCCAGAACTCCAGT	59.654	52.381	0.75	0.00	43.72	4.00
2535	2663	3.374058	CCTTTTGTCCATACTTACGCCAG	59.626	47.826	0.00	0.00	0.00	4.85
2582	2710	5.925509	TCAGGGTACATTTGTAATAGCTCC	58.074	41.667	0.00	0.00	31.52	4.70
2598	2726	1.202099	TGACCGGGCAATTCAGGGTA	61.202	55.000	8.12	0.00	0.00	3.69
2607	2735	0.965439	CATTTTTCCTGACCGGGCAA	59.035	50.000	13.37	0.00	0.00	4.52
2737	2865	5.684030	GCTCCTTGGCATCATTGAAATCATT	60.684	40.000	0.00	0.00	0.00	2.57
2823	2951	5.126869	TGGCAATAAAACATCCGTCATCATT	59.873	36.000	0.00	0.00	0.00	2.57
2825	2953	4.013050	TGGCAATAAAACATCCGTCATCA	58.987	39.130	0.00	0.00	0.00	3.07
2830	2958	2.814919	TCGTTGGCAATAAAACATCCGT	59.185	40.909	1.92	0.00	0.00	4.69
2831	2959	3.479505	TCGTTGGCAATAAAACATCCG	57.520	42.857	1.92	0.00	0.00	4.18
2837	2965	4.217550	CCTCTTCCTTCGTTGGCAATAAAA	59.782	41.667	1.92	0.00	0.00	1.52
2862	2990	9.547753	TCACTTAAACTAGATAATTGCTCATCC	57.452	33.333	0.00	0.00	0.00	3.51
3276	3404	8.451908	ACCAATTAGTATTCAAGGCAGTTATC	57.548	34.615	0.00	0.00	0.00	1.75
3299	3427	5.193679	ACTTCATAGGCTCCAACATTAACC	58.806	41.667	0.00	0.00	0.00	2.85
3307	3435	3.826157	CCAACAAACTTCATAGGCTCCAA	59.174	43.478	0.00	0.00	0.00	3.53
3363	3491	7.394077	TGGAGTTGTCAATAACATCATGTTGAT	59.606	33.333	13.65	0.00	41.30	2.57
3364	3492	6.714356	TGGAGTTGTCAATAACATCATGTTGA	59.286	34.615	13.65	0.00	41.30	3.18
3365	3493	6.803320	GTGGAGTTGTCAATAACATCATGTTG	59.197	38.462	13.65	2.12	41.30	3.33
3366	3494	6.489700	TGTGGAGTTGTCAATAACATCATGTT	59.510	34.615	8.41	8.41	43.88	2.71
3367	3495	6.003326	TGTGGAGTTGTCAATAACATCATGT	58.997	36.000	0.00	0.00	37.82	3.21
3368	3496	6.499234	TGTGGAGTTGTCAATAACATCATG	57.501	37.500	0.00	0.00	37.82	3.07
3369	3497	6.095860	CCATGTGGAGTTGTCAATAACATCAT	59.904	38.462	0.00	0.00	35.85	2.45
3370	3498	5.415389	CCATGTGGAGTTGTCAATAACATCA	59.585	40.000	0.00	0.00	35.85	3.07
3371	3499	5.677091	GCCATGTGGAGTTGTCAATAACATC	60.677	44.000	2.55	0.00	35.85	3.06
3372	3500	4.158394	GCCATGTGGAGTTGTCAATAACAT	59.842	41.667	2.55	0.00	35.85	2.71
3373	3501	3.505680	GCCATGTGGAGTTGTCAATAACA	59.494	43.478	2.55	0.00	37.39	2.41
3374	3502	3.758554	AGCCATGTGGAGTTGTCAATAAC	59.241	43.478	2.55	0.00	37.39	1.89
3375	3503	4.009675	GAGCCATGTGGAGTTGTCAATAA	58.990	43.478	2.55	0.00	37.39	1.40
3376	3504	3.008923	TGAGCCATGTGGAGTTGTCAATA	59.991	43.478	2.55	0.00	37.39	1.90
3377	3505	2.224843	TGAGCCATGTGGAGTTGTCAAT	60.225	45.455	2.55	0.00	37.39	2.57
3378	3506	1.142667	TGAGCCATGTGGAGTTGTCAA	59.857	47.619	2.55	0.00	37.39	3.18
3379	3507	0.764271	TGAGCCATGTGGAGTTGTCA	59.236	50.000	2.55	0.00	37.39	3.58
3410	3538	0.881118	GACAAATGTCCCATGCGTGT	59.119	50.000	4.96	0.00	39.07	4.49
3413	3541	1.733389	GCAAGACAAATGTCCCATGCG	60.733	52.381	15.90	0.00	45.85	4.73
3436	3564	6.746745	ATTTAAAGCCTTTTCCATGCATTG	57.253	33.333	0.00	0.00	0.00	2.82
3437	3565	7.595604	CAAATTTAAAGCCTTTTCCATGCATT	58.404	30.769	0.00	0.00	0.00	3.56
3445	3573	8.558700	TCTTGAATGCAAATTTAAAGCCTTTTC	58.441	29.630	0.00	0.00	32.73	2.29
3446	3574	8.449251	TCTTGAATGCAAATTTAAAGCCTTTT	57.551	26.923	0.00	0.00	32.73	2.27
3447	3575	7.933033	TCTCTTGAATGCAAATTTAAAGCCTTT	59.067	29.630	0.00	0.00	32.73	3.11
3449	3577	6.996509	TCTCTTGAATGCAAATTTAAAGCCT	58.003	32.000	0.00	0.00	32.73	4.58
3450	3578	7.656707	TTCTCTTGAATGCAAATTTAAAGCC	57.343	32.000	0.00	0.00	32.73	4.35
3460	3588	9.617523	TCAGATGTATATTTCTCTTGAATGCAA	57.382	29.630	0.00	0.00	31.56	4.08
3461	3589	9.049523	GTCAGATGTATATTTCTCTTGAATGCA	57.950	33.333	0.00	0.00	31.56	3.96
3462	3590	9.049523	TGTCAGATGTATATTTCTCTTGAATGC	57.950	33.333	0.00	0.00	31.56	3.56
3498	3626	5.221803	ACAAGCAGTATTAGCCTATCATGCT	60.222	40.000	0.00	0.00	44.15	3.79
3500	3628	8.607441	TTAACAAGCAGTATTAGCCTATCATG	57.393	34.615	0.00	0.00	0.00	3.07
3508	3636	6.195165	GCTGTCATTAACAAGCAGTATTAGC	58.805	40.000	0.00	0.00	37.45	3.09
3511	3639	5.009631	TGGCTGTCATTAACAAGCAGTATT	58.990	37.500	0.00	0.00	37.45	1.89
3527	3655	4.623932	TGTAGGATGGATATTGGCTGTC	57.376	45.455	0.00	0.00	0.00	3.51
3528	3656	6.025539	TCTATGTAGGATGGATATTGGCTGT	58.974	40.000	0.00	0.00	0.00	4.40
3530	3658	7.761981	ATTCTATGTAGGATGGATATTGGCT	57.238	36.000	0.00	0.00	0.00	4.75
3560	3689	8.948145	CATGAATTCTTTGCCAAATAATTCCAA	58.052	29.630	25.61	15.58	40.44	3.53
3582	3711	8.922931	TGAATTATAAGATAAGCAAGGCATGA	57.077	30.769	0.00	0.00	0.00	3.07
3641	3770	4.651778	ACCAGAGCAGCAGTTACAAAATA	58.348	39.130	0.00	0.00	0.00	1.40
3643	3772	2.930950	ACCAGAGCAGCAGTTACAAAA	58.069	42.857	0.00	0.00	0.00	2.44
3692	3821	5.529430	CCTTGTTTCACCAACTATGTGTGTA	59.471	40.000	0.00	0.00	36.21	2.90
3693	3822	4.338118	CCTTGTTTCACCAACTATGTGTGT	59.662	41.667	0.00	0.00	36.21	3.72
3696	3825	5.766150	TTCCTTGTTTCACCAACTATGTG	57.234	39.130	0.00	0.00	36.21	3.21
3698	3827	7.447374	TGTATTCCTTGTTTCACCAACTATG	57.553	36.000	0.00	0.00	36.21	2.23
3741	3870	6.646240	GCACATTATTCATCACCACACTTTTT	59.354	34.615	0.00	0.00	0.00	1.94
3742	3871	6.158598	GCACATTATTCATCACCACACTTTT	58.841	36.000	0.00	0.00	0.00	2.27
3752	3881	7.513371	TGATAAGCATGCACATTATTCATCA	57.487	32.000	21.98	8.57	0.00	3.07
3759	3888	7.148035	ACAGACAATTGATAAGCATGCACATTA	60.148	33.333	21.98	10.41	0.00	1.90
3763	3892	4.796830	CACAGACAATTGATAAGCATGCAC	59.203	41.667	21.98	8.73	0.00	4.57
3768	3897	8.043113	AGAAGATACACAGACAATTGATAAGCA	58.957	33.333	13.59	0.00	0.00	3.91
3791	3928	6.460953	GCTGGGTCTTGTGAAAAATAACAGAA	60.461	38.462	0.00	0.00	0.00	3.02
3806	3943	1.970114	CTGTGCCAGCTGGGTCTTG	60.970	63.158	33.46	8.00	39.65	3.02
3810	3947	2.072874	ATTGTCTGTGCCAGCTGGGT	62.073	55.000	33.46	0.00	39.65	4.51
3811	3948	0.896940	AATTGTCTGTGCCAGCTGGG	60.897	55.000	33.46	17.23	40.85	4.45
3815	3952	3.193267	TGGAATAAATTGTCTGTGCCAGC	59.807	43.478	0.00	0.00	0.00	4.85
3846	4036	7.610305	ACTCAAAAACGTTATGGAGATATGGTT	59.390	33.333	22.21	0.00	0.00	3.67
3850	4040	7.827236	TGGAACTCAAAAACGTTATGGAGATAT	59.173	33.333	22.21	12.07	0.00	1.63
3854	4044	5.468746	TCTGGAACTCAAAAACGTTATGGAG	59.531	40.000	16.73	16.73	0.00	3.86
3855	4045	5.369833	TCTGGAACTCAAAAACGTTATGGA	58.630	37.500	0.00	0.00	0.00	3.41
3859	4049	7.818642	TCTTTTTCTGGAACTCAAAAACGTTA	58.181	30.769	0.00	0.00	30.49	3.18
3860	4050	6.683715	TCTTTTTCTGGAACTCAAAAACGTT	58.316	32.000	0.00	0.00	30.49	3.99
3861	4051	6.072119	ACTCTTTTTCTGGAACTCAAAAACGT	60.072	34.615	0.00	0.00	30.49	3.99
3862	4052	6.322491	ACTCTTTTTCTGGAACTCAAAAACG	58.678	36.000	0.00	0.00	30.49	3.60
3863	4053	6.752351	GGACTCTTTTTCTGGAACTCAAAAAC	59.248	38.462	0.00	0.00	30.49	2.43
3869	4059	5.308825	TCATGGACTCTTTTTCTGGAACTC	58.691	41.667	0.00	0.00	0.00	3.01
3870	4060	5.310409	TCATGGACTCTTTTTCTGGAACT	57.690	39.130	0.00	0.00	0.00	3.01
3871	4061	5.278512	GGTTCATGGACTCTTTTTCTGGAAC	60.279	44.000	3.62	0.00	0.00	3.62
3873	4063	4.104738	AGGTTCATGGACTCTTTTTCTGGA	59.895	41.667	3.62	0.00	0.00	3.86
3874	4064	4.217118	CAGGTTCATGGACTCTTTTTCTGG	59.783	45.833	3.62	0.00	0.00	3.86
3875	4065	5.065914	TCAGGTTCATGGACTCTTTTTCTG	58.934	41.667	3.62	1.15	0.00	3.02
3876	4066	5.163152	ACTCAGGTTCATGGACTCTTTTTCT	60.163	40.000	3.62	0.00	0.00	2.52
3877	4067	5.049129	CACTCAGGTTCATGGACTCTTTTTC	60.049	44.000	3.62	0.00	0.00	2.29
3878	4068	4.823989	CACTCAGGTTCATGGACTCTTTTT	59.176	41.667	3.62	0.00	0.00	1.94
3883	4073	1.677217	GGCACTCAGGTTCATGGACTC	60.677	57.143	3.62	0.00	0.00	3.36
3885	4075	0.326264	AGGCACTCAGGTTCATGGAC	59.674	55.000	0.00	0.00	0.00	4.02
3917	4108	5.677319	AAGTGCACTTGTAATAGCTCCTA	57.323	39.130	30.66	0.00	34.38	2.94
3947	4138	2.293677	TATGCTTCTTGACGTCGCAT	57.706	45.000	24.51	24.51	43.11	4.73
4188	4379	2.056577	GTGGTCGGTAAAGAAGACACG	58.943	52.381	0.00	0.00	36.68	4.49
4272	4463	2.094700	CAGCAAACAGAGCATGAGCAAT	60.095	45.455	0.00	0.00	45.49	3.56
4334	4525	5.774690	ACCCATCATGTTCAACAGTTACAAT	59.225	36.000	0.00	0.00	0.00	2.71
4344	4535	1.426983	TGGACCACCCATCATGTTCAA	59.573	47.619	0.00	0.00	40.82	2.69
4425	4621	6.321181	ACTGAAATAGCCAAGTTTTCAACAGA	59.679	34.615	0.00	0.00	38.49	3.41
4426	4622	6.507023	ACTGAAATAGCCAAGTTTTCAACAG	58.493	36.000	0.00	0.00	38.49	3.16
4427	4623	6.463995	ACTGAAATAGCCAAGTTTTCAACA	57.536	33.333	0.00	0.00	38.49	3.33
4428	4624	8.865590	TTAACTGAAATAGCCAAGTTTTCAAC	57.134	30.769	0.00	0.00	38.49	3.18
4441	4637	5.858581	GCCTTGTGCTGTTTAACTGAAATAG	59.141	40.000	6.17	0.00	38.83	1.73
4595	4826	8.058667	ACAGCAATCACATAGATTTCAATGAA	57.941	30.769	0.00	0.00	44.48	2.57
4697	4930	5.765182	GGAAGATGTTGACAAGGAAAGAAGA	59.235	40.000	0.00	0.00	0.00	2.87
4723	4956	0.316689	GGCAACAGTTTTCGTGGACG	60.317	55.000	0.00	0.00	41.45	4.79
4750	4983	2.834549	AGTTCAGTCCAAGATCCACGAT	59.165	45.455	0.00	0.00	0.00	3.73
4763	4996	5.344884	GGCTGAGACAACTATAGTTCAGTC	58.655	45.833	23.70	22.20	35.83	3.51
4892	5128	2.545952	GCCTCGCGAGAAATAGGATTCA	60.546	50.000	36.59	0.00	41.32	2.57
4933	5170	1.766143	GCAAGCGGCGAGAGTTATGG	61.766	60.000	12.98	0.00	0.00	2.74
4953	5190	0.923358	TGGGCCCGTCCAGAATTAAT	59.077	50.000	19.37	0.00	36.21	1.40
4956	5193	1.789576	AAGTGGGCCCGTCCAGAATT	61.790	55.000	19.37	0.00	37.50	2.17
4957	5194	0.912487	TAAGTGGGCCCGTCCAGAAT	60.912	55.000	19.37	0.00	37.50	2.40
4961	5199	1.605453	GAATAAGTGGGCCCGTCCA	59.395	57.895	19.37	2.29	36.21	4.02
4966	5204	0.455815	CAAAGCGAATAAGTGGGCCC	59.544	55.000	17.59	17.59	0.00	5.80
4993	5231	4.571250	CGGTTCTACTTCGCAGCA	57.429	55.556	0.00	0.00	0.00	4.41
5033	5272	0.326927	TTCCCTTAACCAGAAGGCGG	59.673	55.000	0.00	0.00	44.15	6.13
5059	5298	5.891451	AGAAAAGTCAGAAAAGAAAACCGG	58.109	37.500	0.00	0.00	0.00	5.28
5087	5326	6.801539	ATTGTTCTCGTATTTCAGAAAGCA	57.198	33.333	1.28	0.00	30.38	3.91
5107	5346	7.745155	TCAAAAATTGTGCGCATTTGAATATTG	59.255	29.630	25.72	20.26	37.14	1.90
5119	5358	2.097444	CCGACTTTCAAAAATTGTGCGC	60.097	45.455	0.00	0.00	0.00	6.09
5122	5361	8.970691	AGATATTCCGACTTTCAAAAATTGTG	57.029	30.769	0.00	0.00	0.00	3.33

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.