Multiple sequence alignment - TraesCS2B01G204900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G204900 chr2B 100.000 2522 0 0 1 2522 184493691 184496212 0.000000e+00 4658.0
1 TraesCS2B01G204900 chr2B 81.059 491 62 13 839 1312 184513372 184513848 1.840000e-96 363.0
2 TraesCS2B01G204900 chr2B 91.573 178 15 0 1301 1478 184513747 184513924 1.940000e-61 246.0
3 TraesCS2B01G204900 chr2B 87.255 204 26 0 1142 1345 184513735 184513938 1.510000e-57 233.0
4 TraesCS2B01G204900 chr2B 87.255 204 26 0 1142 1345 184612626 184612829 1.510000e-57 233.0
5 TraesCS2B01G204900 chr2B 89.617 183 18 1 1295 1476 184572764 184572946 5.430000e-57 231.0
6 TraesCS2B01G204900 chr2B 89.617 183 18 1 1295 1476 184635545 184635727 5.430000e-57 231.0
7 TraesCS2B01G204900 chr2B 86.765 204 27 0 1142 1345 184572759 184572962 7.020000e-56 228.0
8 TraesCS2B01G204900 chr2B 86.765 204 27 0 1142 1345 184635540 184635743 7.020000e-56 228.0
9 TraesCS2B01G204900 chr2B 92.086 139 7 2 1748 1883 184633023 184633160 2.560000e-45 193.0
10 TraesCS2B01G204900 chr2B 90.647 139 9 2 1748 1883 184600456 184600593 5.540000e-42 182.0
11 TraesCS2B01G204900 chr2A 90.961 1405 67 24 1 1388 137128264 137129625 0.000000e+00 1836.0
12 TraesCS2B01G204900 chr2A 84.831 679 66 16 1238 1883 137129361 137130035 0.000000e+00 649.0
13 TraesCS2B01G204900 chr2A 92.193 269 21 0 1177 1445 137129357 137129625 5.090000e-102 381.0
14 TraesCS2B01G204900 chr2A 85.559 367 45 6 1301 1666 137213004 137213363 6.590000e-101 377.0
15 TraesCS2B01G204900 chr2A 92.593 135 10 0 2388 2522 137130100 137130234 7.120000e-46 195.0
16 TraesCS2B01G204900 chr2A 100.000 30 0 0 2361 2390 137130060 137130089 3.500000e-04 56.5
17 TraesCS2B01G204900 chr2D 89.579 1449 85 25 1 1401 130986816 130988246 0.000000e+00 1779.0
18 TraesCS2B01G204900 chr2D 92.650 585 27 8 680 1254 131041860 131042438 0.000000e+00 828.0
19 TraesCS2B01G204900 chr2D 84.993 733 63 24 1177 1867 130987941 130988668 0.000000e+00 701.0
20 TraesCS2B01G204900 chr2D 85.666 586 66 8 1301 1881 131042338 131042910 3.590000e-168 601.0
21 TraesCS2B01G204900 chr2D 78.325 955 115 45 506 1402 131114010 131114930 1.330000e-147 532.0
22 TraesCS2B01G204900 chr2D 85.921 483 36 11 1301 1768 131043031 131043496 1.050000e-133 486.0
23 TraesCS2B01G204900 chr2D 90.062 322 23 6 1455 1768 131002636 131002956 2.340000e-110 409.0
24 TraesCS2B01G204900 chr2D 81.277 470 55 16 1179 1623 131114626 131115087 1.440000e-92 350.0
25 TraesCS2B01G204900 chr2D 90.566 212 20 0 1177 1388 131042304 131042515 5.310000e-72 281.0
26 TraesCS2B01G204900 chr2D 82.201 309 31 16 100 385 131041425 131041732 6.970000e-61 244.0
27 TraesCS2B01G204900 chr5B 95.565 451 15 4 1883 2329 69813728 69814177 0.000000e+00 717.0
28 TraesCS2B01G204900 chr5A 94.989 459 13 3 1881 2329 375570830 375570372 0.000000e+00 712.0
29 TraesCS2B01G204900 chr5A 94.878 449 18 5 1885 2329 651996306 651995859 0.000000e+00 697.0
30 TraesCS2B01G204900 chr5A 94.235 451 24 2 1881 2329 115244355 115243905 0.000000e+00 688.0
31 TraesCS2B01G204900 chr3A 95.323 449 19 2 1883 2329 479153054 479153502 0.000000e+00 712.0
32 TraesCS2B01G204900 chr3A 94.667 450 18 5 1880 2324 27676958 27676510 0.000000e+00 693.0
33 TraesCS2B01G204900 chr3B 94.912 452 19 4 1880 2329 499185679 499186128 0.000000e+00 704.0
34 TraesCS2B01G204900 chr1A 94.667 450 20 3 1883 2329 530393381 530393829 0.000000e+00 695.0
35 TraesCS2B01G204900 chr4A 92.766 470 32 2 1880 2347 103723162 103723631 0.000000e+00 678.0
36 TraesCS2B01G204900 chr4A 93.612 454 23 6 1880 2329 299609518 299609067 0.000000e+00 673.0
37 TraesCS2B01G204900 chrUn 89.617 183 18 1 1295 1476 476371920 476371738 5.430000e-57 231.0
38 TraesCS2B01G204900 chrUn 86.765 204 27 0 1142 1345 476371925 476371722 7.020000e-56 228.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G204900 chr2B 184493691 184496212 2521 False 4658.000000 4658 100.000000 1 2522 1 chr2B.!!$F1 2521
1 TraesCS2B01G204900 chr2B 184513372 184513938 566 False 280.666667 363 86.629000 839 1478 3 chr2B.!!$F4 639
2 TraesCS2B01G204900 chr2B 184633023 184635743 2720 False 217.333333 231 89.489333 1142 1883 3 chr2B.!!$F6 741
3 TraesCS2B01G204900 chr2A 137128264 137130234 1970 False 623.500000 1836 92.115600 1 2522 5 chr2A.!!$F2 2521
4 TraesCS2B01G204900 chr2D 130986816 130988668 1852 False 1240.000000 1779 87.286000 1 1867 2 chr2D.!!$F2 1866
5 TraesCS2B01G204900 chr2D 131041425 131043496 2071 False 488.000000 828 87.400800 100 1881 5 chr2D.!!$F3 1781
6 TraesCS2B01G204900 chr2D 131114010 131115087 1077 False 441.000000 532 79.801000 506 1623 2 chr2D.!!$F4 1117

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
809 873 1.272704 GCCCTTTCCTGACCCAAATCT 60.273 52.381 0.0 0.0 0.0 2.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1900 3341 0.108138 CGCTAGTGAGGGTTTGAGGG 60.108 60.0 0.0 0.0 0.0 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 31 6.354130 GTTACCATTAGCATACTTCTGGGAA 58.646 40.000 0.00 0.00 32.93 3.97
524 553 5.726980 TTGTGCTCCTTATTTGCTGAAAT 57.273 34.783 0.00 0.00 35.83 2.17
756 819 3.127533 GCATCTGCACGGTGTCCC 61.128 66.667 10.24 0.00 41.59 4.46
787 850 4.218852 AGCCTAAACAGACAGAGTACAGAC 59.781 45.833 0.00 0.00 0.00 3.51
809 873 1.272704 GCCCTTTCCTGACCCAAATCT 60.273 52.381 0.00 0.00 0.00 2.40
895 961 2.588877 ACTTTCTGCGCACGCTGT 60.589 55.556 16.77 0.02 42.51 4.40
1242 2581 1.168714 CTAAGCCTGAGTTGCCCAAC 58.831 55.000 3.01 3.01 41.45 3.77
1243 2582 0.605319 TAAGCCTGAGTTGCCCAACG 60.605 55.000 5.59 0.00 45.50 4.10
1244 2583 2.594592 GCCTGAGTTGCCCAACGT 60.595 61.111 5.59 0.00 45.50 3.99
1245 2584 2.908073 GCCTGAGTTGCCCAACGTG 61.908 63.158 5.59 1.14 45.50 4.49
1246 2585 2.260869 CCTGAGTTGCCCAACGTGG 61.261 63.158 5.59 5.83 45.50 4.94
1247 2586 1.227823 CTGAGTTGCCCAACGTGGA 60.228 57.895 5.59 0.00 45.50 4.02
1248 2587 1.227823 TGAGTTGCCCAACGTGGAG 60.228 57.895 5.59 0.00 45.50 3.86
1249 2588 2.594592 AGTTGCCCAACGTGGAGC 60.595 61.111 5.59 0.00 45.50 4.70
1250 2589 2.594592 GTTGCCCAACGTGGAGCT 60.595 61.111 0.00 0.00 40.96 4.09
1251 2590 2.594303 TTGCCCAACGTGGAGCTG 60.594 61.111 0.00 0.00 40.96 4.24
1279 2618 3.357079 CGGAGGTGCACTTGCCAC 61.357 66.667 17.98 0.00 41.18 5.01
1280 2619 2.985847 GGAGGTGCACTTGCCACC 60.986 66.667 17.98 4.16 40.26 4.61
1282 2621 1.374947 GAGGTGCACTTGCCACCTA 59.625 57.895 17.98 0.00 45.62 3.08
1283 2622 0.250727 GAGGTGCACTTGCCACCTAA 60.251 55.000 17.98 0.00 45.62 2.69
1284 2623 0.250901 AGGTGCACTTGCCACCTAAG 60.251 55.000 17.98 0.00 44.64 2.18
1285 2624 1.581447 GTGCACTTGCCACCTAAGC 59.419 57.895 10.32 0.00 41.18 3.09
1286 2625 1.603455 TGCACTTGCCACCTAAGCC 60.603 57.895 0.00 0.00 41.18 4.35
1287 2626 1.303643 GCACTTGCCACCTAAGCCT 60.304 57.895 0.00 0.00 34.31 4.58
1288 2627 1.589716 GCACTTGCCACCTAAGCCTG 61.590 60.000 0.00 0.00 34.31 4.85
1289 2628 0.036732 CACTTGCCACCTAAGCCTGA 59.963 55.000 0.00 0.00 0.00 3.86
1290 2629 0.326264 ACTTGCCACCTAAGCCTGAG 59.674 55.000 0.00 0.00 0.00 3.35
1291 2630 0.326264 CTTGCCACCTAAGCCTGAGT 59.674 55.000 0.00 0.00 0.00 3.41
1292 2631 0.771127 TTGCCACCTAAGCCTGAGTT 59.229 50.000 0.00 0.00 0.00 3.01
1293 2632 0.036732 TGCCACCTAAGCCTGAGTTG 59.963 55.000 0.00 0.00 0.00 3.16
1294 2633 1.308783 GCCACCTAAGCCTGAGTTGC 61.309 60.000 0.00 0.00 0.00 4.17
1295 2634 0.678048 CCACCTAAGCCTGAGTTGCC 60.678 60.000 0.00 0.00 0.00 4.52
1296 2635 0.678048 CACCTAAGCCTGAGTTGCCC 60.678 60.000 0.00 0.00 0.00 5.36
1297 2636 1.133809 ACCTAAGCCTGAGTTGCCCA 61.134 55.000 0.00 0.00 0.00 5.36
1298 2637 0.038166 CCTAAGCCTGAGTTGCCCAA 59.962 55.000 0.00 0.00 0.00 4.12
1299 2638 1.168714 CTAAGCCTGAGTTGCCCAAC 58.831 55.000 3.01 3.01 41.45 3.77
1320 2740 2.671070 GAGCTGCCACCTAAGCCA 59.329 61.111 0.00 0.00 40.42 4.75
1377 2797 4.601794 CACCTGCCACCCAAGCCA 62.602 66.667 0.00 0.00 0.00 4.75
1498 2918 2.206036 TTCCCGGGTTCCACCTCT 59.794 61.111 22.86 0.00 38.64 3.69
1506 2926 2.119611 TTCCACCTCTCGGAGCCA 59.880 61.111 0.00 0.00 33.01 4.75
1638 3059 0.380378 TGGTTTTCAGCGAGTGTTGC 59.620 50.000 0.00 0.00 0.00 4.17
1738 3162 3.871006 TCGTAAGTATGCATGCTTCCTTG 59.129 43.478 29.90 18.58 34.54 3.61
1857 3298 7.957002 TGATATTTACAACCCACACATTGTTT 58.043 30.769 0.00 0.00 39.67 2.83
1873 3314 5.521010 ACATTGTTTGTTGAGTTTGCATCAG 59.479 36.000 0.00 0.00 33.74 2.90
1879 3320 6.539649 TTGTTGAGTTTGCATCAGTAGTAC 57.460 37.500 0.00 0.00 0.00 2.73
1880 3321 5.853936 TGTTGAGTTTGCATCAGTAGTACT 58.146 37.500 0.00 0.00 0.00 2.73
1881 3322 6.988522 TGTTGAGTTTGCATCAGTAGTACTA 58.011 36.000 1.57 0.00 0.00 1.82
1882 3323 7.438564 TGTTGAGTTTGCATCAGTAGTACTAA 58.561 34.615 3.61 0.00 0.00 2.24
1883 3324 7.598869 TGTTGAGTTTGCATCAGTAGTACTAAG 59.401 37.037 3.61 0.63 0.00 2.18
1884 3325 7.462571 TGAGTTTGCATCAGTAGTACTAAGA 57.537 36.000 3.61 6.47 0.00 2.10
1885 3326 7.539436 TGAGTTTGCATCAGTAGTACTAAGAG 58.461 38.462 3.61 0.00 0.00 2.85
1886 3327 6.334202 AGTTTGCATCAGTAGTACTAAGAGC 58.666 40.000 3.61 11.08 0.00 4.09
1887 3328 5.914898 TTGCATCAGTAGTACTAAGAGCA 57.085 39.130 3.61 13.08 0.00 4.26
1888 3329 6.471233 TTGCATCAGTAGTACTAAGAGCAT 57.529 37.500 19.36 4.56 0.00 3.79
1889 3330 6.471233 TGCATCAGTAGTACTAAGAGCATT 57.529 37.500 3.61 0.00 0.00 3.56
1890 3331 7.582667 TGCATCAGTAGTACTAAGAGCATTA 57.417 36.000 3.61 0.00 0.00 1.90
1891 3332 7.426410 TGCATCAGTAGTACTAAGAGCATTAC 58.574 38.462 3.61 0.00 0.00 1.89
1892 3333 7.285629 TGCATCAGTAGTACTAAGAGCATTACT 59.714 37.037 3.61 0.00 0.00 2.24
1893 3334 8.784994 GCATCAGTAGTACTAAGAGCATTACTA 58.215 37.037 3.61 0.00 0.00 1.82
1901 3342 9.341078 AGTACTAAGAGCATTACTAGTAGAACC 57.659 37.037 3.59 0.00 0.00 3.62
1902 3343 7.585579 ACTAAGAGCATTACTAGTAGAACCC 57.414 40.000 3.59 0.00 0.00 4.11
1903 3344 7.355890 ACTAAGAGCATTACTAGTAGAACCCT 58.644 38.462 3.59 0.00 0.00 4.34
1904 3345 6.718522 AAGAGCATTACTAGTAGAACCCTC 57.281 41.667 3.59 6.41 0.00 4.30
1905 3346 5.767670 AGAGCATTACTAGTAGAACCCTCA 58.232 41.667 3.59 0.00 0.00 3.86
1906 3347 6.195700 AGAGCATTACTAGTAGAACCCTCAA 58.804 40.000 3.59 0.00 0.00 3.02
1907 3348 6.668283 AGAGCATTACTAGTAGAACCCTCAAA 59.332 38.462 3.59 0.00 0.00 2.69
1908 3349 6.641474 AGCATTACTAGTAGAACCCTCAAAC 58.359 40.000 3.59 0.00 0.00 2.93
1909 3350 5.816258 GCATTACTAGTAGAACCCTCAAACC 59.184 44.000 3.59 0.00 0.00 3.27
1910 3351 6.346896 CATTACTAGTAGAACCCTCAAACCC 58.653 44.000 3.59 0.00 0.00 4.11
1911 3352 4.143406 ACTAGTAGAACCCTCAAACCCT 57.857 45.455 3.59 0.00 0.00 4.34
1912 3353 4.095211 ACTAGTAGAACCCTCAAACCCTC 58.905 47.826 3.59 0.00 0.00 4.30
1913 3354 2.986050 AGTAGAACCCTCAAACCCTCA 58.014 47.619 0.00 0.00 0.00 3.86
1914 3355 2.638363 AGTAGAACCCTCAAACCCTCAC 59.362 50.000 0.00 0.00 0.00 3.51
1915 3356 1.821088 AGAACCCTCAAACCCTCACT 58.179 50.000 0.00 0.00 0.00 3.41
1916 3357 2.986050 AGAACCCTCAAACCCTCACTA 58.014 47.619 0.00 0.00 0.00 2.74
1917 3358 2.907042 AGAACCCTCAAACCCTCACTAG 59.093 50.000 0.00 0.00 0.00 2.57
1918 3359 0.984995 ACCCTCAAACCCTCACTAGC 59.015 55.000 0.00 0.00 0.00 3.42
1919 3360 0.108138 CCCTCAAACCCTCACTAGCG 60.108 60.000 0.00 0.00 0.00 4.26
1920 3361 0.608640 CCTCAAACCCTCACTAGCGT 59.391 55.000 0.00 0.00 0.00 5.07
1921 3362 1.002087 CCTCAAACCCTCACTAGCGTT 59.998 52.381 0.00 0.00 0.00 4.84
1922 3363 2.550208 CCTCAAACCCTCACTAGCGTTT 60.550 50.000 0.00 0.00 34.73 3.60
1923 3364 3.139077 CTCAAACCCTCACTAGCGTTTT 58.861 45.455 0.00 0.00 32.61 2.43
1924 3365 4.312443 CTCAAACCCTCACTAGCGTTTTA 58.688 43.478 0.00 0.00 32.61 1.52
1925 3366 4.706035 TCAAACCCTCACTAGCGTTTTAA 58.294 39.130 0.00 0.00 32.61 1.52
1926 3367 5.310451 TCAAACCCTCACTAGCGTTTTAAT 58.690 37.500 0.00 0.00 32.61 1.40
1927 3368 5.180492 TCAAACCCTCACTAGCGTTTTAATG 59.820 40.000 0.00 0.00 32.61 1.90
1928 3369 3.606687 ACCCTCACTAGCGTTTTAATGG 58.393 45.455 0.00 0.00 0.00 3.16
1929 3370 3.008704 ACCCTCACTAGCGTTTTAATGGT 59.991 43.478 0.00 0.00 0.00 3.55
1930 3371 3.621715 CCCTCACTAGCGTTTTAATGGTC 59.378 47.826 0.00 0.00 0.00 4.02
1931 3372 3.621715 CCTCACTAGCGTTTTAATGGTCC 59.378 47.826 0.00 0.00 0.00 4.46
1932 3373 4.250464 CTCACTAGCGTTTTAATGGTCCA 58.750 43.478 0.00 0.00 0.00 4.02
1933 3374 4.643463 TCACTAGCGTTTTAATGGTCCAA 58.357 39.130 0.00 0.00 0.00 3.53
1934 3375 5.064558 TCACTAGCGTTTTAATGGTCCAAA 58.935 37.500 0.00 0.00 0.00 3.28
1935 3376 5.531659 TCACTAGCGTTTTAATGGTCCAAAA 59.468 36.000 0.00 0.00 0.00 2.44
1936 3377 6.039493 TCACTAGCGTTTTAATGGTCCAAAAA 59.961 34.615 0.00 0.00 0.00 1.94
1937 3378 6.866248 CACTAGCGTTTTAATGGTCCAAAAAT 59.134 34.615 0.00 0.00 0.00 1.82
1938 3379 6.866248 ACTAGCGTTTTAATGGTCCAAAAATG 59.134 34.615 13.43 13.43 33.99 2.32
1939 3380 5.848406 AGCGTTTTAATGGTCCAAAAATGA 58.152 33.333 18.98 0.00 33.09 2.57
1940 3381 6.463360 AGCGTTTTAATGGTCCAAAAATGAT 58.537 32.000 18.98 12.94 33.09 2.45
1941 3382 6.589907 AGCGTTTTAATGGTCCAAAAATGATC 59.410 34.615 18.98 7.42 33.09 2.92
1942 3383 6.589907 GCGTTTTAATGGTCCAAAAATGATCT 59.410 34.615 18.98 0.00 33.09 2.75
1943 3384 7.117667 GCGTTTTAATGGTCCAAAAATGATCTT 59.882 33.333 18.98 0.74 33.09 2.40
1944 3385 8.987890 CGTTTTAATGGTCCAAAAATGATCTTT 58.012 29.630 12.79 0.00 33.09 2.52
1948 3389 9.844257 TTAATGGTCCAAAAATGATCTTTTTGT 57.156 25.926 25.00 16.03 43.88 2.83
1949 3390 7.733402 ATGGTCCAAAAATGATCTTTTTGTG 57.267 32.000 25.00 19.99 43.88 3.33
1950 3391 5.526846 TGGTCCAAAAATGATCTTTTTGTGC 59.473 36.000 25.00 20.07 43.88 4.57
1951 3392 5.526846 GGTCCAAAAATGATCTTTTTGTGCA 59.473 36.000 25.00 14.93 43.88 4.57
1952 3393 6.421405 GTCCAAAAATGATCTTTTTGTGCAC 58.579 36.000 25.00 10.75 43.88 4.57
1953 3394 6.258507 GTCCAAAAATGATCTTTTTGTGCACT 59.741 34.615 25.00 0.00 43.88 4.40
1954 3395 6.822676 TCCAAAAATGATCTTTTTGTGCACTT 59.177 30.769 25.00 0.00 43.88 3.16
1955 3396 7.336427 TCCAAAAATGATCTTTTTGTGCACTTT 59.664 29.630 25.00 2.96 43.88 2.66
1956 3397 7.969508 CCAAAAATGATCTTTTTGTGCACTTTT 59.030 29.630 25.00 9.12 43.88 2.27
1957 3398 9.985318 CAAAAATGATCTTTTTGTGCACTTTTA 57.015 25.926 19.41 0.00 41.76 1.52
1958 3399 9.986833 AAAAATGATCTTTTTGTGCACTTTTAC 57.013 25.926 19.41 3.03 31.17 2.01
1959 3400 6.991485 ATGATCTTTTTGTGCACTTTTACG 57.009 33.333 19.41 2.49 0.00 3.18
1960 3401 5.277825 TGATCTTTTTGTGCACTTTTACGG 58.722 37.500 19.41 2.74 0.00 4.02
1961 3402 4.035278 TCTTTTTGTGCACTTTTACGGG 57.965 40.909 19.41 1.27 0.00 5.28
1962 3403 3.444388 TCTTTTTGTGCACTTTTACGGGT 59.556 39.130 19.41 0.00 0.00 5.28
1963 3404 3.870633 TTTTGTGCACTTTTACGGGTT 57.129 38.095 19.41 0.00 0.00 4.11
1964 3405 2.853731 TTGTGCACTTTTACGGGTTG 57.146 45.000 19.41 0.00 0.00 3.77
1965 3406 2.039818 TGTGCACTTTTACGGGTTGA 57.960 45.000 19.41 0.00 0.00 3.18
1966 3407 2.366533 TGTGCACTTTTACGGGTTGAA 58.633 42.857 19.41 0.00 0.00 2.69
1967 3408 2.753452 TGTGCACTTTTACGGGTTGAAA 59.247 40.909 19.41 0.00 0.00 2.69
1968 3409 3.192844 TGTGCACTTTTACGGGTTGAAAA 59.807 39.130 19.41 0.00 0.00 2.29
1969 3410 4.174762 GTGCACTTTTACGGGTTGAAAAA 58.825 39.130 10.32 0.00 0.00 1.94
1970 3411 4.031991 GTGCACTTTTACGGGTTGAAAAAC 59.968 41.667 10.32 0.00 0.00 2.43
1971 3412 4.174762 GCACTTTTACGGGTTGAAAAACA 58.825 39.130 0.00 0.00 32.77 2.83
1972 3413 4.626172 GCACTTTTACGGGTTGAAAAACAA 59.374 37.500 0.00 0.00 32.77 2.83
1973 3414 5.220322 GCACTTTTACGGGTTGAAAAACAAG 60.220 40.000 0.00 0.00 39.30 3.16
1974 3415 5.289917 CACTTTTACGGGTTGAAAAACAAGG 59.710 40.000 0.00 0.00 39.30 3.61
1975 3416 4.388378 TTTACGGGTTGAAAAACAAGGG 57.612 40.909 0.00 0.00 39.30 3.95
1976 3417 0.462375 ACGGGTTGAAAAACAAGGGC 59.538 50.000 0.00 0.00 39.30 5.19
1977 3418 0.461961 CGGGTTGAAAAACAAGGGCA 59.538 50.000 0.00 0.00 39.30 5.36
1978 3419 1.134670 CGGGTTGAAAAACAAGGGCAA 60.135 47.619 0.00 0.00 39.30 4.52
1979 3420 2.678190 CGGGTTGAAAAACAAGGGCAAA 60.678 45.455 0.00 0.00 39.30 3.68
1980 3421 2.942376 GGGTTGAAAAACAAGGGCAAAG 59.058 45.455 0.00 0.00 39.30 2.77
1981 3422 3.369997 GGGTTGAAAAACAAGGGCAAAGA 60.370 43.478 0.00 0.00 39.30 2.52
1982 3423 4.450976 GGTTGAAAAACAAGGGCAAAGAT 58.549 39.130 0.00 0.00 39.30 2.40
1983 3424 4.881273 GGTTGAAAAACAAGGGCAAAGATT 59.119 37.500 0.00 0.00 39.30 2.40
1984 3425 6.052360 GGTTGAAAAACAAGGGCAAAGATTA 58.948 36.000 0.00 0.00 39.30 1.75
1985 3426 6.202762 GGTTGAAAAACAAGGGCAAAGATTAG 59.797 38.462 0.00 0.00 39.30 1.73
1986 3427 6.723298 TGAAAAACAAGGGCAAAGATTAGA 57.277 33.333 0.00 0.00 0.00 2.10
1987 3428 7.118496 TGAAAAACAAGGGCAAAGATTAGAA 57.882 32.000 0.00 0.00 0.00 2.10
1988 3429 6.983890 TGAAAAACAAGGGCAAAGATTAGAAC 59.016 34.615 0.00 0.00 0.00 3.01
1989 3430 5.468540 AAACAAGGGCAAAGATTAGAACC 57.531 39.130 0.00 0.00 0.00 3.62
1990 3431 3.431415 ACAAGGGCAAAGATTAGAACCC 58.569 45.455 0.00 0.00 37.63 4.11
1992 3433 3.653835 AGGGCAAAGATTAGAACCCTC 57.346 47.619 0.00 0.00 44.52 4.30
1993 3434 2.919602 AGGGCAAAGATTAGAACCCTCA 59.080 45.455 0.00 0.00 44.52 3.86
1994 3435 3.333680 AGGGCAAAGATTAGAACCCTCAA 59.666 43.478 0.00 0.00 44.52 3.02
1995 3436 4.086457 GGGCAAAGATTAGAACCCTCAAA 58.914 43.478 0.00 0.00 34.34 2.69
1996 3437 4.082190 GGGCAAAGATTAGAACCCTCAAAC 60.082 45.833 0.00 0.00 34.34 2.93
1997 3438 4.082190 GGCAAAGATTAGAACCCTCAAACC 60.082 45.833 0.00 0.00 0.00 3.27
1998 3439 4.082190 GCAAAGATTAGAACCCTCAAACCC 60.082 45.833 0.00 0.00 0.00 4.11
1999 3440 5.076873 CAAAGATTAGAACCCTCAAACCCA 58.923 41.667 0.00 0.00 0.00 4.51
2000 3441 5.333566 AAGATTAGAACCCTCAAACCCAA 57.666 39.130 0.00 0.00 0.00 4.12
2001 3442 4.663334 AGATTAGAACCCTCAAACCCAAC 58.337 43.478 0.00 0.00 0.00 3.77
2002 3443 2.963599 TAGAACCCTCAAACCCAACC 57.036 50.000 0.00 0.00 0.00 3.77
2003 3444 0.187606 AGAACCCTCAAACCCAACCC 59.812 55.000 0.00 0.00 0.00 4.11
2004 3445 0.187606 GAACCCTCAAACCCAACCCT 59.812 55.000 0.00 0.00 0.00 4.34
2005 3446 0.639943 AACCCTCAAACCCAACCCTT 59.360 50.000 0.00 0.00 0.00 3.95
2006 3447 1.536644 ACCCTCAAACCCAACCCTTA 58.463 50.000 0.00 0.00 0.00 2.69
2007 3448 2.078611 ACCCTCAAACCCAACCCTTAT 58.921 47.619 0.00 0.00 0.00 1.73
2008 3449 3.270812 ACCCTCAAACCCAACCCTTATA 58.729 45.455 0.00 0.00 0.00 0.98
2009 3450 3.663632 ACCCTCAAACCCAACCCTTATAA 59.336 43.478 0.00 0.00 0.00 0.98
2010 3451 4.021229 CCCTCAAACCCAACCCTTATAAC 58.979 47.826 0.00 0.00 0.00 1.89
2011 3452 3.692593 CCTCAAACCCAACCCTTATAACG 59.307 47.826 0.00 0.00 0.00 3.18
2012 3453 3.688235 TCAAACCCAACCCTTATAACGG 58.312 45.455 0.00 0.00 0.00 4.44
2013 3454 3.330110 TCAAACCCAACCCTTATAACGGA 59.670 43.478 7.42 0.00 0.00 4.69
2014 3455 4.080687 CAAACCCAACCCTTATAACGGAA 58.919 43.478 7.42 0.00 0.00 4.30
2015 3456 4.596354 AACCCAACCCTTATAACGGAAT 57.404 40.909 7.42 0.00 0.00 3.01
2016 3457 5.713760 AACCCAACCCTTATAACGGAATA 57.286 39.130 7.42 0.00 0.00 1.75
2017 3458 5.917545 ACCCAACCCTTATAACGGAATAT 57.082 39.130 7.42 0.00 0.00 1.28
2018 3459 6.270219 ACCCAACCCTTATAACGGAATATT 57.730 37.500 7.42 0.00 0.00 1.28
2019 3460 6.301486 ACCCAACCCTTATAACGGAATATTC 58.699 40.000 6.93 6.93 0.00 1.75
2020 3461 5.708697 CCCAACCCTTATAACGGAATATTCC 59.291 44.000 22.63 22.63 44.05 3.01
2021 3462 5.708697 CCAACCCTTATAACGGAATATTCCC 59.291 44.000 25.60 10.60 44.67 3.97
2022 3463 6.300703 CAACCCTTATAACGGAATATTCCCA 58.699 40.000 25.60 13.37 44.67 4.37
2023 3464 6.713731 ACCCTTATAACGGAATATTCCCAT 57.286 37.500 25.60 18.45 44.67 4.00
2024 3465 6.481643 ACCCTTATAACGGAATATTCCCATG 58.518 40.000 25.60 15.71 44.67 3.66
2025 3466 6.273730 ACCCTTATAACGGAATATTCCCATGA 59.726 38.462 25.60 10.35 44.67 3.07
2026 3467 7.172342 CCCTTATAACGGAATATTCCCATGAA 58.828 38.462 25.60 13.75 44.67 2.57
2027 3468 7.120726 CCCTTATAACGGAATATTCCCATGAAC 59.879 40.741 25.60 2.66 44.67 3.18
2028 3469 7.148474 CCTTATAACGGAATATTCCCATGAACG 60.148 40.741 25.60 15.48 44.67 3.95
2029 3470 3.830744 ACGGAATATTCCCATGAACGA 57.169 42.857 25.60 0.00 44.67 3.85
2030 3471 3.463944 ACGGAATATTCCCATGAACGAC 58.536 45.455 25.60 0.63 44.67 4.34
2031 3472 2.475111 CGGAATATTCCCATGAACGACG 59.525 50.000 25.60 8.60 44.67 5.12
2032 3473 3.463944 GGAATATTCCCATGAACGACGT 58.536 45.455 22.09 0.00 41.62 4.34
2033 3474 3.875134 GGAATATTCCCATGAACGACGTT 59.125 43.478 22.09 14.11 41.62 3.99
2034 3475 4.260620 GGAATATTCCCATGAACGACGTTG 60.261 45.833 22.09 4.40 41.62 4.10
2035 3476 2.178912 ATTCCCATGAACGACGTTGT 57.821 45.000 19.60 1.48 32.13 3.32
2036 3477 1.504359 TTCCCATGAACGACGTTGTC 58.496 50.000 19.60 5.24 0.00 3.18
2062 3503 4.430765 CGGGAAGTCGACGGGGTG 62.431 72.222 10.46 0.00 0.00 4.61
2063 3504 4.078516 GGGAAGTCGACGGGGTGG 62.079 72.222 10.46 0.00 0.00 4.61
2064 3505 4.754667 GGAAGTCGACGGGGTGGC 62.755 72.222 10.46 0.00 0.00 5.01
2065 3506 4.754667 GAAGTCGACGGGGTGGCC 62.755 72.222 10.46 0.00 0.00 5.36
2088 3529 4.189188 CGACGGGGCGACTACCAG 62.189 72.222 0.00 0.00 0.00 4.00
2089 3530 4.509737 GACGGGGCGACTACCAGC 62.510 72.222 0.00 0.00 0.00 4.85
2096 3537 4.849329 CGACTACCAGCGGCGGTC 62.849 72.222 9.40 5.03 40.67 4.79
2097 3538 4.849329 GACTACCAGCGGCGGTCG 62.849 72.222 9.40 5.05 40.67 4.79
2125 3566 3.470888 CGCGGGAGTTGGGAGGAT 61.471 66.667 0.00 0.00 0.00 3.24
2126 3567 2.998949 GCGGGAGTTGGGAGGATT 59.001 61.111 0.00 0.00 0.00 3.01
2127 3568 1.303282 GCGGGAGTTGGGAGGATTT 59.697 57.895 0.00 0.00 0.00 2.17
2128 3569 0.323451 GCGGGAGTTGGGAGGATTTT 60.323 55.000 0.00 0.00 0.00 1.82
2129 3570 1.891011 GCGGGAGTTGGGAGGATTTTT 60.891 52.381 0.00 0.00 0.00 1.94
2130 3571 2.092323 CGGGAGTTGGGAGGATTTTTC 58.908 52.381 0.00 0.00 0.00 2.29
2131 3572 2.457598 GGGAGTTGGGAGGATTTTTCC 58.542 52.381 0.00 0.00 0.00 3.13
2138 3579 2.795165 GAGGATTTTTCCCTCCCGC 58.205 57.895 0.00 0.00 43.37 6.13
2139 3580 1.077716 AGGATTTTTCCCTCCCGCG 60.078 57.895 0.00 0.00 31.49 6.46
2140 3581 2.771639 GGATTTTTCCCTCCCGCGC 61.772 63.158 0.00 0.00 0.00 6.86
2141 3582 3.108357 GATTTTTCCCTCCCGCGCG 62.108 63.158 25.67 25.67 0.00 6.86
2142 3583 3.615509 ATTTTTCCCTCCCGCGCGA 62.616 57.895 34.63 11.99 0.00 5.87
2143 3584 4.752879 TTTTCCCTCCCGCGCGAG 62.753 66.667 34.63 20.97 0.00 5.03
2149 3590 2.354773 CTCCCGCGCGAGGATAAC 60.355 66.667 34.63 0.00 31.48 1.89
2150 3591 3.843117 CTCCCGCGCGAGGATAACC 62.843 68.421 34.63 0.00 31.48 2.85
2152 3593 4.564116 CCGCGCGAGGATAACCGT 62.564 66.667 34.63 0.00 41.83 4.83
2153 3594 3.022914 CGCGCGAGGATAACCGTC 61.023 66.667 28.94 0.00 41.83 4.79
2154 3595 2.103538 GCGCGAGGATAACCGTCA 59.896 61.111 12.10 0.00 41.83 4.35
2155 3596 1.517694 GCGCGAGGATAACCGTCAA 60.518 57.895 12.10 0.00 41.83 3.18
2156 3597 1.079875 GCGCGAGGATAACCGTCAAA 61.080 55.000 12.10 0.00 41.83 2.69
2157 3598 1.567504 CGCGAGGATAACCGTCAAAT 58.432 50.000 0.00 0.00 41.83 2.32
2158 3599 1.257936 CGCGAGGATAACCGTCAAATG 59.742 52.381 0.00 0.00 41.83 2.32
2159 3600 2.546778 GCGAGGATAACCGTCAAATGA 58.453 47.619 0.00 0.00 41.83 2.57
2160 3601 2.540101 GCGAGGATAACCGTCAAATGAG 59.460 50.000 0.00 0.00 41.83 2.90
2161 3602 3.123804 CGAGGATAACCGTCAAATGAGG 58.876 50.000 0.00 0.00 41.83 3.86
2167 3608 2.566824 CCGTCAAATGAGGGTTGGG 58.433 57.895 12.82 0.00 43.19 4.12
2168 3609 0.965363 CCGTCAAATGAGGGTTGGGG 60.965 60.000 12.82 0.00 43.19 4.96
2169 3610 0.251165 CGTCAAATGAGGGTTGGGGT 60.251 55.000 0.00 0.00 0.00 4.95
2170 3611 1.003812 CGTCAAATGAGGGTTGGGGTA 59.996 52.381 0.00 0.00 0.00 3.69
2171 3612 2.723273 GTCAAATGAGGGTTGGGGTAG 58.277 52.381 0.00 0.00 0.00 3.18
2172 3613 1.638589 TCAAATGAGGGTTGGGGTAGG 59.361 52.381 0.00 0.00 0.00 3.18
2173 3614 1.357761 CAAATGAGGGTTGGGGTAGGT 59.642 52.381 0.00 0.00 0.00 3.08
2174 3615 1.768265 AATGAGGGTTGGGGTAGGTT 58.232 50.000 0.00 0.00 0.00 3.50
2175 3616 1.768265 ATGAGGGTTGGGGTAGGTTT 58.232 50.000 0.00 0.00 0.00 3.27
2176 3617 1.536644 TGAGGGTTGGGGTAGGTTTT 58.463 50.000 0.00 0.00 0.00 2.43
2177 3618 1.146152 TGAGGGTTGGGGTAGGTTTTG 59.854 52.381 0.00 0.00 0.00 2.44
2178 3619 0.178944 AGGGTTGGGGTAGGTTTTGC 60.179 55.000 0.00 0.00 0.00 3.68
2179 3620 0.178944 GGGTTGGGGTAGGTTTTGCT 60.179 55.000 0.00 0.00 0.00 3.91
2180 3621 1.254026 GGTTGGGGTAGGTTTTGCTC 58.746 55.000 0.00 0.00 0.00 4.26
2181 3622 1.254026 GTTGGGGTAGGTTTTGCTCC 58.746 55.000 0.00 0.00 31.53 4.70
2182 3623 0.113580 TTGGGGTAGGTTTTGCTCCC 59.886 55.000 0.00 0.00 37.59 4.30
2183 3624 4.757773 GGGTAGGTTTTGCTCCCC 57.242 61.111 0.00 0.00 32.66 4.81
2184 3625 1.771646 GGGTAGGTTTTGCTCCCCA 59.228 57.895 0.00 0.00 32.66 4.96
2185 3626 0.113580 GGGTAGGTTTTGCTCCCCAA 59.886 55.000 0.00 0.00 32.66 4.12
2186 3627 1.254026 GGTAGGTTTTGCTCCCCAAC 58.746 55.000 0.00 0.00 31.97 3.77
2187 3628 1.254026 GTAGGTTTTGCTCCCCAACC 58.746 55.000 0.00 0.00 40.40 3.77
2188 3629 0.113580 TAGGTTTTGCTCCCCAACCC 59.886 55.000 0.00 0.00 40.92 4.11
2189 3630 1.152333 GGTTTTGCTCCCCAACCCT 60.152 57.895 0.00 0.00 34.90 4.34
2190 3631 0.762842 GGTTTTGCTCCCCAACCCTT 60.763 55.000 0.00 0.00 34.90 3.95
2191 3632 1.481615 GGTTTTGCTCCCCAACCCTTA 60.482 52.381 0.00 0.00 34.90 2.69
2192 3633 1.616865 GTTTTGCTCCCCAACCCTTAC 59.383 52.381 0.00 0.00 31.97 2.34
2193 3634 1.154430 TTTGCTCCCCAACCCTTACT 58.846 50.000 0.00 0.00 31.97 2.24
2194 3635 1.154430 TTGCTCCCCAACCCTTACTT 58.846 50.000 0.00 0.00 0.00 2.24
2195 3636 1.154430 TGCTCCCCAACCCTTACTTT 58.846 50.000 0.00 0.00 0.00 2.66
2196 3637 1.501604 TGCTCCCCAACCCTTACTTTT 59.498 47.619 0.00 0.00 0.00 2.27
2197 3638 1.893137 GCTCCCCAACCCTTACTTTTG 59.107 52.381 0.00 0.00 0.00 2.44
2198 3639 2.490168 GCTCCCCAACCCTTACTTTTGA 60.490 50.000 0.00 0.00 0.00 2.69
2199 3640 3.421844 CTCCCCAACCCTTACTTTTGAG 58.578 50.000 0.00 0.00 0.00 3.02
2200 3641 2.109304 TCCCCAACCCTTACTTTTGAGG 59.891 50.000 0.00 0.00 0.00 3.86
2201 3642 2.109304 CCCCAACCCTTACTTTTGAGGA 59.891 50.000 0.00 0.00 34.91 3.71
2202 3643 3.245622 CCCCAACCCTTACTTTTGAGGAT 60.246 47.826 0.00 0.00 34.91 3.24
2203 3644 4.416516 CCCAACCCTTACTTTTGAGGATT 58.583 43.478 0.00 0.00 34.91 3.01
2204 3645 4.220602 CCCAACCCTTACTTTTGAGGATTG 59.779 45.833 0.00 0.00 34.91 2.67
2205 3646 4.220602 CCAACCCTTACTTTTGAGGATTGG 59.779 45.833 1.27 1.27 34.91 3.16
2206 3647 4.047627 ACCCTTACTTTTGAGGATTGGG 57.952 45.455 0.00 0.00 34.91 4.12
2207 3648 3.660669 ACCCTTACTTTTGAGGATTGGGA 59.339 43.478 0.00 0.00 34.91 4.37
2208 3649 4.263949 ACCCTTACTTTTGAGGATTGGGAG 60.264 45.833 0.00 0.00 34.91 4.30
2209 3650 4.018415 CCCTTACTTTTGAGGATTGGGAGA 60.018 45.833 0.00 0.00 34.91 3.71
2210 3651 5.189180 CCTTACTTTTGAGGATTGGGAGAG 58.811 45.833 0.00 0.00 34.91 3.20
2211 3652 3.728385 ACTTTTGAGGATTGGGAGAGG 57.272 47.619 0.00 0.00 0.00 3.69
2212 3653 3.260205 ACTTTTGAGGATTGGGAGAGGA 58.740 45.455 0.00 0.00 0.00 3.71
2213 3654 3.854994 ACTTTTGAGGATTGGGAGAGGAT 59.145 43.478 0.00 0.00 0.00 3.24
2214 3655 4.293368 ACTTTTGAGGATTGGGAGAGGATT 59.707 41.667 0.00 0.00 0.00 3.01
2215 3656 4.953781 TTTGAGGATTGGGAGAGGATTT 57.046 40.909 0.00 0.00 0.00 2.17
2216 3657 3.939740 TGAGGATTGGGAGAGGATTTG 57.060 47.619 0.00 0.00 0.00 2.32
2217 3658 3.463825 TGAGGATTGGGAGAGGATTTGA 58.536 45.455 0.00 0.00 0.00 2.69
2218 3659 3.457380 TGAGGATTGGGAGAGGATTTGAG 59.543 47.826 0.00 0.00 0.00 3.02
2219 3660 2.782341 AGGATTGGGAGAGGATTTGAGG 59.218 50.000 0.00 0.00 0.00 3.86
2220 3661 2.158549 GGATTGGGAGAGGATTTGAGGG 60.159 54.545 0.00 0.00 0.00 4.30
2221 3662 2.059756 TTGGGAGAGGATTTGAGGGT 57.940 50.000 0.00 0.00 0.00 4.34
2222 3663 2.059756 TGGGAGAGGATTTGAGGGTT 57.940 50.000 0.00 0.00 0.00 4.11
2223 3664 1.635487 TGGGAGAGGATTTGAGGGTTG 59.365 52.381 0.00 0.00 0.00 3.77
2224 3665 1.064389 GGGAGAGGATTTGAGGGTTGG 60.064 57.143 0.00 0.00 0.00 3.77
2225 3666 1.916181 GGAGAGGATTTGAGGGTTGGA 59.084 52.381 0.00 0.00 0.00 3.53
2226 3667 2.356227 GGAGAGGATTTGAGGGTTGGAC 60.356 54.545 0.00 0.00 0.00 4.02
2227 3668 1.636003 AGAGGATTTGAGGGTTGGACC 59.364 52.381 0.00 0.00 37.60 4.46
2228 3669 1.636003 GAGGATTTGAGGGTTGGACCT 59.364 52.381 0.00 0.00 45.57 3.85
2229 3670 2.041755 GAGGATTTGAGGGTTGGACCTT 59.958 50.000 0.00 0.00 42.10 3.50
2230 3671 2.450886 AGGATTTGAGGGTTGGACCTTT 59.549 45.455 0.00 0.00 42.10 3.11
2231 3672 3.660669 AGGATTTGAGGGTTGGACCTTTA 59.339 43.478 0.00 0.00 42.10 1.85
2232 3673 4.107311 AGGATTTGAGGGTTGGACCTTTAA 59.893 41.667 0.00 0.00 42.10 1.52
2233 3674 4.836175 GGATTTGAGGGTTGGACCTTTAAA 59.164 41.667 2.52 2.52 42.10 1.52
2234 3675 5.483937 GGATTTGAGGGTTGGACCTTTAAAT 59.516 40.000 10.38 10.38 42.10 1.40
2235 3676 6.666113 GGATTTGAGGGTTGGACCTTTAAATA 59.334 38.462 10.51 0.00 42.10 1.40
2236 3677 7.179516 GGATTTGAGGGTTGGACCTTTAAATAA 59.820 37.037 10.51 0.00 42.10 1.40
2237 3678 7.916077 TTTGAGGGTTGGACCTTTAAATAAA 57.084 32.000 0.00 0.00 42.10 1.40
2238 3679 8.499288 TTTGAGGGTTGGACCTTTAAATAAAT 57.501 30.769 0.00 0.00 42.10 1.40
2239 3680 8.499288 TTGAGGGTTGGACCTTTAAATAAATT 57.501 30.769 0.00 0.00 42.10 1.82
2240 3681 8.499288 TGAGGGTTGGACCTTTAAATAAATTT 57.501 30.769 0.00 0.00 42.10 1.82
2241 3682 8.371699 TGAGGGTTGGACCTTTAAATAAATTTG 58.628 33.333 0.00 0.00 42.10 2.32
2242 3683 8.499288 AGGGTTGGACCTTTAAATAAATTTGA 57.501 30.769 0.00 0.00 37.69 2.69
2243 3684 8.593679 AGGGTTGGACCTTTAAATAAATTTGAG 58.406 33.333 0.00 0.00 37.69 3.02
2244 3685 7.822334 GGGTTGGACCTTTAAATAAATTTGAGG 59.178 37.037 0.00 13.70 38.64 3.86
2245 3686 7.822334 GGTTGGACCTTTAAATAAATTTGAGGG 59.178 37.037 17.09 12.65 38.12 4.30
2246 3687 8.372459 GTTGGACCTTTAAATAAATTTGAGGGT 58.628 33.333 12.06 12.06 44.53 4.34
2247 3688 8.499288 TGGACCTTTAAATAAATTTGAGGGTT 57.501 30.769 13.05 1.37 42.83 4.11
2248 3689 8.939932 TGGACCTTTAAATAAATTTGAGGGTTT 58.060 29.630 13.05 0.00 42.83 3.27
2249 3690 9.214957 GGACCTTTAAATAAATTTGAGGGTTTG 57.785 33.333 13.05 0.00 42.83 2.93
2250 3691 9.990360 GACCTTTAAATAAATTTGAGGGTTTGA 57.010 29.630 13.05 0.00 42.83 2.69
2251 3692 9.996554 ACCTTTAAATAAATTTGAGGGTTTGAG 57.003 29.630 17.09 0.00 40.98 3.02
2252 3693 9.435688 CCTTTAAATAAATTTGAGGGTTTGAGG 57.564 33.333 0.00 3.89 33.98 3.86
2253 3694 9.435688 CTTTAAATAAATTTGAGGGTTTGAGGG 57.564 33.333 0.00 0.00 0.00 4.30
2254 3695 8.499288 TTAAATAAATTTGAGGGTTTGAGGGT 57.501 30.769 0.00 0.00 0.00 4.34
2255 3696 7.387265 AAATAAATTTGAGGGTTTGAGGGTT 57.613 32.000 0.00 0.00 0.00 4.11
2256 3697 8.499288 AAATAAATTTGAGGGTTTGAGGGTTA 57.501 30.769 0.00 0.00 0.00 2.85
2257 3698 8.499288 AATAAATTTGAGGGTTTGAGGGTTAA 57.501 30.769 0.00 0.00 0.00 2.01
2258 3699 6.419484 AAATTTGAGGGTTTGAGGGTTAAG 57.581 37.500 0.00 0.00 0.00 1.85
2259 3700 3.518992 TTGAGGGTTTGAGGGTTAAGG 57.481 47.619 0.00 0.00 0.00 2.69
2260 3701 1.708551 TGAGGGTTTGAGGGTTAAGGG 59.291 52.381 0.00 0.00 0.00 3.95
2261 3702 1.005569 GAGGGTTTGAGGGTTAAGGGG 59.994 57.143 0.00 0.00 0.00 4.79
2262 3703 0.781920 GGGTTTGAGGGTTAAGGGGT 59.218 55.000 0.00 0.00 0.00 4.95
2263 3704 1.148446 GGGTTTGAGGGTTAAGGGGTT 59.852 52.381 0.00 0.00 0.00 4.11
2264 3705 2.522185 GGTTTGAGGGTTAAGGGGTTC 58.478 52.381 0.00 0.00 0.00 3.62
2265 3706 2.109480 GGTTTGAGGGTTAAGGGGTTCT 59.891 50.000 0.00 0.00 0.00 3.01
2266 3707 3.331591 GGTTTGAGGGTTAAGGGGTTCTA 59.668 47.826 0.00 0.00 0.00 2.10
2267 3708 4.567116 GGTTTGAGGGTTAAGGGGTTCTAG 60.567 50.000 0.00 0.00 0.00 2.43
2268 3709 3.572661 TGAGGGTTAAGGGGTTCTAGT 57.427 47.619 0.00 0.00 0.00 2.57
2269 3710 3.447950 TGAGGGTTAAGGGGTTCTAGTC 58.552 50.000 0.00 0.00 0.00 2.59
2270 3711 3.078612 TGAGGGTTAAGGGGTTCTAGTCT 59.921 47.826 0.00 0.00 0.00 3.24
2271 3712 4.295775 TGAGGGTTAAGGGGTTCTAGTCTA 59.704 45.833 0.00 0.00 0.00 2.59
2272 3713 4.618635 AGGGTTAAGGGGTTCTAGTCTAC 58.381 47.826 0.00 0.00 0.00 2.59
2273 3714 3.382865 GGGTTAAGGGGTTCTAGTCTACG 59.617 52.174 0.00 0.00 0.00 3.51
2274 3715 3.382865 GGTTAAGGGGTTCTAGTCTACGG 59.617 52.174 0.00 0.00 0.00 4.02
2275 3716 1.482954 AAGGGGTTCTAGTCTACGGC 58.517 55.000 0.00 0.00 0.00 5.68
2276 3717 0.630134 AGGGGTTCTAGTCTACGGCT 59.370 55.000 0.00 0.00 0.00 5.52
2277 3718 1.031235 GGGGTTCTAGTCTACGGCTC 58.969 60.000 0.00 0.00 0.00 4.70
2278 3719 1.409942 GGGGTTCTAGTCTACGGCTCT 60.410 57.143 0.00 0.00 0.00 4.09
2279 3720 2.377073 GGGTTCTAGTCTACGGCTCTT 58.623 52.381 0.00 0.00 0.00 2.85
2280 3721 2.759535 GGGTTCTAGTCTACGGCTCTTT 59.240 50.000 0.00 0.00 0.00 2.52
2281 3722 3.195182 GGGTTCTAGTCTACGGCTCTTTT 59.805 47.826 0.00 0.00 0.00 2.27
2282 3723 4.322574 GGGTTCTAGTCTACGGCTCTTTTT 60.323 45.833 0.00 0.00 0.00 1.94
2283 3724 4.863689 GGTTCTAGTCTACGGCTCTTTTTC 59.136 45.833 0.00 0.00 0.00 2.29
2284 3725 4.352600 TCTAGTCTACGGCTCTTTTTCG 57.647 45.455 0.00 0.00 0.00 3.46
2285 3726 4.005650 TCTAGTCTACGGCTCTTTTTCGA 58.994 43.478 0.00 0.00 0.00 3.71
2286 3727 2.943993 AGTCTACGGCTCTTTTTCGAC 58.056 47.619 0.00 0.00 0.00 4.20
2287 3728 1.647702 GTCTACGGCTCTTTTTCGACG 59.352 52.381 0.00 0.00 0.00 5.12
2288 3729 1.536766 TCTACGGCTCTTTTTCGACGA 59.463 47.619 0.00 0.00 0.00 4.20
2289 3730 2.030893 TCTACGGCTCTTTTTCGACGAA 60.031 45.455 6.10 6.10 0.00 3.85
2290 3731 1.574134 ACGGCTCTTTTTCGACGAAA 58.426 45.000 18.66 18.66 0.00 3.46
2291 3732 1.935199 ACGGCTCTTTTTCGACGAAAA 59.065 42.857 27.21 27.21 39.36 2.29
2292 3733 2.286008 ACGGCTCTTTTTCGACGAAAAC 60.286 45.455 29.90 19.87 40.56 2.43
2293 3734 2.033151 CGGCTCTTTTTCGACGAAAACT 60.033 45.455 29.90 0.00 40.56 2.66
2294 3735 3.289076 GGCTCTTTTTCGACGAAAACTG 58.711 45.455 29.90 24.45 40.56 3.16
2295 3736 3.242641 GGCTCTTTTTCGACGAAAACTGT 60.243 43.478 29.90 0.00 40.56 3.55
2296 3737 4.025480 GGCTCTTTTTCGACGAAAACTGTA 60.025 41.667 29.90 17.29 40.56 2.74
2297 3738 5.495502 GCTCTTTTTCGACGAAAACTGTAA 58.504 37.500 29.90 16.97 40.56 2.41
2298 3739 5.961263 GCTCTTTTTCGACGAAAACTGTAAA 59.039 36.000 29.90 16.35 40.56 2.01
2299 3740 6.466730 GCTCTTTTTCGACGAAAACTGTAAAA 59.533 34.615 29.90 15.73 40.56 1.52
2300 3741 7.007636 GCTCTTTTTCGACGAAAACTGTAAAAA 59.992 33.333 29.90 15.11 40.56 1.94
2325 3766 9.554395 AAAACAGTTATTTTTAGGGGTTTGATG 57.446 29.630 0.00 0.00 0.00 3.07
2326 3767 7.239763 ACAGTTATTTTTAGGGGTTTGATGG 57.760 36.000 0.00 0.00 0.00 3.51
2327 3768 6.785466 ACAGTTATTTTTAGGGGTTTGATGGT 59.215 34.615 0.00 0.00 0.00 3.55
2328 3769 7.291416 ACAGTTATTTTTAGGGGTTTGATGGTT 59.709 33.333 0.00 0.00 0.00 3.67
2329 3770 7.817478 CAGTTATTTTTAGGGGTTTGATGGTTC 59.183 37.037 0.00 0.00 0.00 3.62
2330 3771 7.733047 AGTTATTTTTAGGGGTTTGATGGTTCT 59.267 33.333 0.00 0.00 0.00 3.01
2331 3772 9.027202 GTTATTTTTAGGGGTTTGATGGTTCTA 57.973 33.333 0.00 0.00 0.00 2.10
2332 3773 6.904463 TTTTTAGGGGTTTGATGGTTCTAC 57.096 37.500 0.00 0.00 0.00 2.59
2333 3774 5.853572 TTTAGGGGTTTGATGGTTCTACT 57.146 39.130 0.00 0.00 0.00 2.57
2334 3775 6.956102 TTTAGGGGTTTGATGGTTCTACTA 57.044 37.500 0.00 0.00 0.00 1.82
2335 3776 6.555463 TTAGGGGTTTGATGGTTCTACTAG 57.445 41.667 0.00 0.00 0.00 2.57
2336 3777 4.436079 AGGGGTTTGATGGTTCTACTAGT 58.564 43.478 0.00 0.00 0.00 2.57
2337 3778 5.596763 AGGGGTTTGATGGTTCTACTAGTA 58.403 41.667 1.89 1.89 0.00 1.82
2338 3779 6.027482 AGGGGTTTGATGGTTCTACTAGTAA 58.973 40.000 3.76 0.00 0.00 2.24
2339 3780 6.677076 AGGGGTTTGATGGTTCTACTAGTAAT 59.323 38.462 3.76 0.00 0.00 1.89
2340 3781 6.766467 GGGGTTTGATGGTTCTACTAGTAATG 59.234 42.308 3.76 0.00 0.00 1.90
2341 3782 6.260271 GGGTTTGATGGTTCTACTAGTAATGC 59.740 42.308 3.76 0.00 0.00 3.56
2342 3783 7.048512 GGTTTGATGGTTCTACTAGTAATGCT 58.951 38.462 3.76 0.00 0.00 3.79
2407 3885 0.790814 GTAGCTCACTTCCGTGTTGC 59.209 55.000 0.00 0.00 41.89 4.17
2413 3891 1.528076 ACTTCCGTGTTGCATGGCA 60.528 52.632 2.65 0.00 40.13 4.92
2416 3894 3.367743 CCGTGTTGCATGGCAGCT 61.368 61.111 6.61 0.00 40.35 4.24
2442 4174 8.166422 TGGTCTCTCCTTTTGTAATTTTCTTC 57.834 34.615 0.00 0.00 37.07 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 31 6.263842 TGAGTTCTGTTGAGCATCTCATTTTT 59.736 34.615 0.00 0.00 40.39 1.94
205 229 9.965824 ATTGTTTAAAACGATTCAAACTGAGAT 57.034 25.926 5.85 0.00 31.35 2.75
246 271 6.405731 GGCTGGTTATGCAAGATGAAATACAA 60.406 38.462 0.00 0.00 0.00 2.41
248 273 5.300286 AGGCTGGTTATGCAAGATGAAATAC 59.700 40.000 0.00 0.00 0.00 1.89
310 335 3.144506 AGTCTGGATTGAACAGCTGTTG 58.855 45.455 35.67 19.18 38.56 3.33
524 553 7.492524 TGTTATAATGTGTTGGCTTTTCACAA 58.507 30.769 0.00 0.00 43.59 3.33
579 612 8.986477 AAACAATCTGGAATTTAACATGCTAC 57.014 30.769 0.00 0.00 0.00 3.58
617 650 5.754890 AGGAATGCTGCAGTAAAACAAAAAG 59.245 36.000 16.64 0.00 0.00 2.27
756 819 1.537202 GTCTGTTTAGGCTGCAGTTGG 59.463 52.381 16.64 0.00 0.00 3.77
787 850 0.178964 TTTGGGTCAGGAAAGGGCAG 60.179 55.000 0.00 0.00 0.00 4.85
809 873 5.728637 TTCAGAGTCTACATCTGCTCAAA 57.271 39.130 0.00 0.00 43.20 2.69
895 961 7.070696 TGCTTGCTATTTATAGGGTACAGAAGA 59.929 37.037 0.00 0.00 0.00 2.87
1257 2596 4.021925 AAGTGCACCTCCGGGAGC 62.022 66.667 18.91 9.16 46.93 4.70
1258 2597 2.046892 CAAGTGCACCTCCGGGAG 60.047 66.667 17.41 17.41 36.25 4.30
1259 2598 4.329545 GCAAGTGCACCTCCGGGA 62.330 66.667 14.63 0.00 41.59 5.14
1261 2600 4.641645 TGGCAAGTGCACCTCCGG 62.642 66.667 14.63 0.00 44.36 5.14
1262 2601 3.357079 GTGGCAAGTGCACCTCCG 61.357 66.667 14.63 0.19 44.36 4.63
1263 2602 2.124507 TAGGTGGCAAGTGCACCTCC 62.125 60.000 22.43 12.71 44.98 4.30
1264 2603 0.250727 TTAGGTGGCAAGTGCACCTC 60.251 55.000 22.43 2.38 44.98 3.85
1265 2604 0.250901 CTTAGGTGGCAAGTGCACCT 60.251 55.000 22.41 22.41 46.50 4.00
1266 2605 1.866853 GCTTAGGTGGCAAGTGCACC 61.867 60.000 14.63 13.69 44.36 5.01
1267 2606 1.581447 GCTTAGGTGGCAAGTGCAC 59.419 57.895 9.40 9.40 44.36 4.57
1268 2607 1.603455 GGCTTAGGTGGCAAGTGCA 60.603 57.895 5.52 0.00 44.36 4.57
1269 2608 1.303643 AGGCTTAGGTGGCAAGTGC 60.304 57.895 0.00 0.00 41.14 4.40
1270 2609 0.036732 TCAGGCTTAGGTGGCAAGTG 59.963 55.000 0.00 0.00 34.73 3.16
1271 2610 0.326264 CTCAGGCTTAGGTGGCAAGT 59.674 55.000 0.00 0.00 34.73 3.16
1272 2611 0.326264 ACTCAGGCTTAGGTGGCAAG 59.674 55.000 0.10 0.00 34.73 4.01
1273 2612 0.771127 AACTCAGGCTTAGGTGGCAA 59.229 50.000 0.10 0.00 34.73 4.52
1274 2613 0.036732 CAACTCAGGCTTAGGTGGCA 59.963 55.000 5.82 0.00 34.73 4.92
1275 2614 1.308783 GCAACTCAGGCTTAGGTGGC 61.309 60.000 15.15 5.51 32.05 5.01
1276 2615 0.678048 GGCAACTCAGGCTTAGGTGG 60.678 60.000 15.15 0.00 32.05 4.61
1277 2616 0.678048 GGGCAACTCAGGCTTAGGTG 60.678 60.000 9.40 9.40 34.66 4.00
1278 2617 1.133809 TGGGCAACTCAGGCTTAGGT 61.134 55.000 0.10 0.00 0.00 3.08
1279 2618 0.038166 TTGGGCAACTCAGGCTTAGG 59.962 55.000 0.10 0.00 0.00 2.69
1280 2619 1.168714 GTTGGGCAACTCAGGCTTAG 58.831 55.000 0.00 0.00 38.25 2.18
1281 2620 0.605319 CGTTGGGCAACTCAGGCTTA 60.605 55.000 0.00 0.00 39.08 3.09
1282 2621 1.898574 CGTTGGGCAACTCAGGCTT 60.899 57.895 0.00 0.00 39.08 4.35
1283 2622 2.281761 CGTTGGGCAACTCAGGCT 60.282 61.111 0.00 0.00 39.08 4.58
1284 2623 2.594592 ACGTTGGGCAACTCAGGC 60.595 61.111 0.00 0.00 39.08 4.85
1285 2624 2.260869 CCACGTTGGGCAACTCAGG 61.261 63.158 0.00 0.00 39.08 3.86
1286 2625 1.227823 TCCACGTTGGGCAACTCAG 60.228 57.895 0.00 0.00 38.32 3.35
1287 2626 1.227823 CTCCACGTTGGGCAACTCA 60.228 57.895 0.00 0.00 38.32 3.41
1288 2627 2.617274 GCTCCACGTTGGGCAACTC 61.617 63.158 6.62 0.00 38.32 3.01
1289 2628 2.594592 GCTCCACGTTGGGCAACT 60.595 61.111 6.62 0.00 38.32 3.16
1290 2629 2.594592 AGCTCCACGTTGGGCAAC 60.595 61.111 14.66 0.00 38.32 4.17
1291 2630 2.594303 CAGCTCCACGTTGGGCAA 60.594 61.111 14.66 0.00 38.32 4.52
1294 2633 4.641645 TGGCAGCTCCACGTTGGG 62.642 66.667 1.25 0.00 40.72 4.12
1320 2740 2.530151 TCCACCTTGGGCAGCTCT 60.530 61.111 0.00 0.00 38.32 4.09
1377 2797 2.530151 TCCACCTTGGGCAGCTCT 60.530 61.111 0.00 0.00 38.32 4.09
1422 2842 2.610859 ATCTCCGGCTTGGGTGGT 60.611 61.111 0.00 0.00 38.76 4.16
1687 3110 9.174166 GGCTCTTACAAGAAAAGGATAATTGTA 57.826 33.333 0.00 0.00 35.77 2.41
1695 3118 4.652822 GAAGGGCTCTTACAAGAAAAGGA 58.347 43.478 0.00 0.00 34.03 3.36
1704 3127 4.441079 GCATACTTACGAAGGGCTCTTACA 60.441 45.833 0.00 0.00 32.52 2.41
1738 3162 2.867975 AGCTTGCTGTGAAAATTGTTGC 59.132 40.909 0.00 0.00 0.00 4.17
1857 3298 5.853936 AGTACTACTGATGCAAACTCAACA 58.146 37.500 0.00 0.00 0.00 3.33
1879 3320 7.502895 TGAGGGTTCTACTAGTAATGCTCTTAG 59.497 40.741 3.76 0.00 0.00 2.18
1880 3321 7.351952 TGAGGGTTCTACTAGTAATGCTCTTA 58.648 38.462 3.76 0.00 0.00 2.10
1881 3322 6.195700 TGAGGGTTCTACTAGTAATGCTCTT 58.804 40.000 3.76 0.00 0.00 2.85
1882 3323 5.767670 TGAGGGTTCTACTAGTAATGCTCT 58.232 41.667 3.76 2.05 0.00 4.09
1883 3324 6.466885 TTGAGGGTTCTACTAGTAATGCTC 57.533 41.667 3.76 0.00 0.00 4.26
1884 3325 6.351966 GGTTTGAGGGTTCTACTAGTAATGCT 60.352 42.308 3.76 0.00 0.00 3.79
1885 3326 5.816258 GGTTTGAGGGTTCTACTAGTAATGC 59.184 44.000 3.76 0.00 0.00 3.56
1886 3327 6.156429 AGGGTTTGAGGGTTCTACTAGTAATG 59.844 42.308 3.76 0.00 0.00 1.90
1887 3328 6.269974 AGGGTTTGAGGGTTCTACTAGTAAT 58.730 40.000 3.76 0.00 0.00 1.89
1888 3329 5.658474 AGGGTTTGAGGGTTCTACTAGTAA 58.342 41.667 3.76 0.00 0.00 2.24
1889 3330 5.222400 TGAGGGTTTGAGGGTTCTACTAGTA 60.222 44.000 1.89 1.89 0.00 1.82
1890 3331 4.095211 GAGGGTTTGAGGGTTCTACTAGT 58.905 47.826 0.00 0.00 0.00 2.57
1891 3332 4.081586 GTGAGGGTTTGAGGGTTCTACTAG 60.082 50.000 0.00 0.00 0.00 2.57
1892 3333 3.836562 GTGAGGGTTTGAGGGTTCTACTA 59.163 47.826 0.00 0.00 0.00 1.82
1893 3334 2.638363 GTGAGGGTTTGAGGGTTCTACT 59.362 50.000 0.00 0.00 0.00 2.57
1894 3335 2.638363 AGTGAGGGTTTGAGGGTTCTAC 59.362 50.000 0.00 0.00 0.00 2.59
1895 3336 2.986050 AGTGAGGGTTTGAGGGTTCTA 58.014 47.619 0.00 0.00 0.00 2.10
1896 3337 1.821088 AGTGAGGGTTTGAGGGTTCT 58.179 50.000 0.00 0.00 0.00 3.01
1897 3338 2.615747 GCTAGTGAGGGTTTGAGGGTTC 60.616 54.545 0.00 0.00 0.00 3.62
1898 3339 1.351350 GCTAGTGAGGGTTTGAGGGTT 59.649 52.381 0.00 0.00 0.00 4.11
1899 3340 0.984995 GCTAGTGAGGGTTTGAGGGT 59.015 55.000 0.00 0.00 0.00 4.34
1900 3341 0.108138 CGCTAGTGAGGGTTTGAGGG 60.108 60.000 0.00 0.00 0.00 4.30
1901 3342 0.608640 ACGCTAGTGAGGGTTTGAGG 59.391 55.000 10.99 0.00 46.10 3.86
1908 3349 3.606687 ACCATTAAAACGCTAGTGAGGG 58.393 45.455 10.99 0.39 41.37 4.30
1909 3350 3.621715 GGACCATTAAAACGCTAGTGAGG 59.378 47.826 10.99 2.84 0.00 3.86
1910 3351 4.250464 TGGACCATTAAAACGCTAGTGAG 58.750 43.478 10.99 0.00 0.00 3.51
1911 3352 4.274602 TGGACCATTAAAACGCTAGTGA 57.725 40.909 10.99 0.00 0.00 3.41
1912 3353 5.365403 TTTGGACCATTAAAACGCTAGTG 57.635 39.130 0.59 0.59 0.00 2.74
1913 3354 6.394025 TTTTTGGACCATTAAAACGCTAGT 57.606 33.333 0.00 0.00 0.00 2.57
1914 3355 7.087639 TCATTTTTGGACCATTAAAACGCTAG 58.912 34.615 6.28 0.00 0.00 3.42
1915 3356 6.982852 TCATTTTTGGACCATTAAAACGCTA 58.017 32.000 6.28 0.00 0.00 4.26
1916 3357 5.848406 TCATTTTTGGACCATTAAAACGCT 58.152 33.333 6.28 0.00 0.00 5.07
1917 3358 6.589907 AGATCATTTTTGGACCATTAAAACGC 59.410 34.615 6.28 0.00 0.00 4.84
1918 3359 8.532977 AAGATCATTTTTGGACCATTAAAACG 57.467 30.769 6.28 0.00 0.00 3.60
1932 3373 9.986833 GTAAAAGTGCACAAAAAGATCATTTTT 57.013 25.926 21.04 13.73 33.39 1.94
1933 3374 8.327429 CGTAAAAGTGCACAAAAAGATCATTTT 58.673 29.630 21.04 14.21 32.89 1.82
1934 3375 7.042791 CCGTAAAAGTGCACAAAAAGATCATTT 60.043 33.333 21.04 3.54 0.00 2.32
1935 3376 6.420604 CCGTAAAAGTGCACAAAAAGATCATT 59.579 34.615 21.04 0.00 0.00 2.57
1936 3377 5.920273 CCGTAAAAGTGCACAAAAAGATCAT 59.080 36.000 21.04 0.00 0.00 2.45
1937 3378 5.277825 CCGTAAAAGTGCACAAAAAGATCA 58.722 37.500 21.04 0.00 0.00 2.92
1938 3379 4.679654 CCCGTAAAAGTGCACAAAAAGATC 59.320 41.667 21.04 0.76 0.00 2.75
1939 3380 4.098807 ACCCGTAAAAGTGCACAAAAAGAT 59.901 37.500 21.04 0.13 0.00 2.40
1940 3381 3.444388 ACCCGTAAAAGTGCACAAAAAGA 59.556 39.130 21.04 0.00 0.00 2.52
1941 3382 3.776340 ACCCGTAAAAGTGCACAAAAAG 58.224 40.909 21.04 5.47 0.00 2.27
1942 3383 3.870633 ACCCGTAAAAGTGCACAAAAA 57.129 38.095 21.04 0.00 0.00 1.94
1943 3384 3.192844 TCAACCCGTAAAAGTGCACAAAA 59.807 39.130 21.04 0.00 0.00 2.44
1944 3385 2.753452 TCAACCCGTAAAAGTGCACAAA 59.247 40.909 21.04 0.00 0.00 2.83
1945 3386 2.366533 TCAACCCGTAAAAGTGCACAA 58.633 42.857 21.04 0.00 0.00 3.33
1946 3387 2.039818 TCAACCCGTAAAAGTGCACA 57.960 45.000 21.04 0.00 0.00 4.57
1947 3388 3.423996 TTTCAACCCGTAAAAGTGCAC 57.576 42.857 9.40 9.40 0.00 4.57
1948 3389 4.174762 GTTTTTCAACCCGTAAAAGTGCA 58.825 39.130 0.00 0.00 0.00 4.57
1949 3390 4.174762 TGTTTTTCAACCCGTAAAAGTGC 58.825 39.130 0.00 0.00 31.02 4.40
1950 3391 5.289917 CCTTGTTTTTCAACCCGTAAAAGTG 59.710 40.000 0.00 0.00 31.02 3.16
1951 3392 5.412640 CCTTGTTTTTCAACCCGTAAAAGT 58.587 37.500 0.00 0.00 31.02 2.66
1952 3393 4.806775 CCCTTGTTTTTCAACCCGTAAAAG 59.193 41.667 0.00 0.00 31.02 2.27
1953 3394 4.756502 CCCTTGTTTTTCAACCCGTAAAA 58.243 39.130 0.00 0.00 31.02 1.52
1954 3395 3.430513 GCCCTTGTTTTTCAACCCGTAAA 60.431 43.478 0.00 0.00 31.02 2.01
1955 3396 2.101082 GCCCTTGTTTTTCAACCCGTAA 59.899 45.455 0.00 0.00 31.02 3.18
1956 3397 1.682323 GCCCTTGTTTTTCAACCCGTA 59.318 47.619 0.00 0.00 31.02 4.02
1957 3398 0.462375 GCCCTTGTTTTTCAACCCGT 59.538 50.000 0.00 0.00 31.02 5.28
1958 3399 0.461961 TGCCCTTGTTTTTCAACCCG 59.538 50.000 0.00 0.00 31.02 5.28
1959 3400 2.700722 TTGCCCTTGTTTTTCAACCC 57.299 45.000 0.00 0.00 31.02 4.11
1960 3401 3.867857 TCTTTGCCCTTGTTTTTCAACC 58.132 40.909 0.00 0.00 31.02 3.77
1961 3402 6.983890 TCTAATCTTTGCCCTTGTTTTTCAAC 59.016 34.615 0.00 0.00 32.18 3.18
1962 3403 7.118496 TCTAATCTTTGCCCTTGTTTTTCAA 57.882 32.000 0.00 0.00 34.61 2.69
1963 3404 6.723298 TCTAATCTTTGCCCTTGTTTTTCA 57.277 33.333 0.00 0.00 0.00 2.69
1964 3405 6.423905 GGTTCTAATCTTTGCCCTTGTTTTTC 59.576 38.462 0.00 0.00 0.00 2.29
1965 3406 6.288294 GGTTCTAATCTTTGCCCTTGTTTTT 58.712 36.000 0.00 0.00 0.00 1.94
1966 3407 5.221641 GGGTTCTAATCTTTGCCCTTGTTTT 60.222 40.000 0.00 0.00 33.58 2.43
1967 3408 4.283467 GGGTTCTAATCTTTGCCCTTGTTT 59.717 41.667 0.00 0.00 33.58 2.83
1968 3409 3.832490 GGGTTCTAATCTTTGCCCTTGTT 59.168 43.478 0.00 0.00 33.58 2.83
1969 3410 3.076032 AGGGTTCTAATCTTTGCCCTTGT 59.924 43.478 0.00 0.00 43.38 3.16
1970 3411 3.696548 GAGGGTTCTAATCTTTGCCCTTG 59.303 47.826 0.00 0.00 45.63 3.61
1971 3412 3.333680 TGAGGGTTCTAATCTTTGCCCTT 59.666 43.478 0.00 0.00 45.63 3.95
1973 3414 3.366052 TGAGGGTTCTAATCTTTGCCC 57.634 47.619 0.00 0.00 36.46 5.36
1974 3415 4.082190 GGTTTGAGGGTTCTAATCTTTGCC 60.082 45.833 0.00 0.00 0.00 4.52
1975 3416 4.082190 GGGTTTGAGGGTTCTAATCTTTGC 60.082 45.833 0.00 0.00 0.00 3.68
1976 3417 5.076873 TGGGTTTGAGGGTTCTAATCTTTG 58.923 41.667 0.00 0.00 0.00 2.77
1977 3418 5.333566 TGGGTTTGAGGGTTCTAATCTTT 57.666 39.130 0.00 0.00 0.00 2.52
1978 3419 5.077564 GTTGGGTTTGAGGGTTCTAATCTT 58.922 41.667 0.00 0.00 0.00 2.40
1979 3420 4.508584 GGTTGGGTTTGAGGGTTCTAATCT 60.509 45.833 0.00 0.00 0.00 2.40
1980 3421 3.762288 GGTTGGGTTTGAGGGTTCTAATC 59.238 47.826 0.00 0.00 0.00 1.75
1981 3422 3.501568 GGGTTGGGTTTGAGGGTTCTAAT 60.502 47.826 0.00 0.00 0.00 1.73
1982 3423 2.158430 GGGTTGGGTTTGAGGGTTCTAA 60.158 50.000 0.00 0.00 0.00 2.10
1983 3424 1.426215 GGGTTGGGTTTGAGGGTTCTA 59.574 52.381 0.00 0.00 0.00 2.10
1984 3425 0.187606 GGGTTGGGTTTGAGGGTTCT 59.812 55.000 0.00 0.00 0.00 3.01
1985 3426 0.187606 AGGGTTGGGTTTGAGGGTTC 59.812 55.000 0.00 0.00 0.00 3.62
1986 3427 0.639943 AAGGGTTGGGTTTGAGGGTT 59.360 50.000 0.00 0.00 0.00 4.11
1987 3428 1.536644 TAAGGGTTGGGTTTGAGGGT 58.463 50.000 0.00 0.00 0.00 4.34
1988 3429 2.919772 ATAAGGGTTGGGTTTGAGGG 57.080 50.000 0.00 0.00 0.00 4.30
1989 3430 3.692593 CGTTATAAGGGTTGGGTTTGAGG 59.307 47.826 0.00 0.00 0.00 3.86
1990 3431 3.692593 CCGTTATAAGGGTTGGGTTTGAG 59.307 47.826 14.83 0.00 0.00 3.02
1991 3432 3.330110 TCCGTTATAAGGGTTGGGTTTGA 59.670 43.478 20.71 0.00 35.51 2.69
1992 3433 3.688235 TCCGTTATAAGGGTTGGGTTTG 58.312 45.455 20.71 0.00 35.51 2.93
1993 3434 4.385478 TTCCGTTATAAGGGTTGGGTTT 57.615 40.909 20.71 0.00 35.51 3.27
1994 3435 4.596354 ATTCCGTTATAAGGGTTGGGTT 57.404 40.909 20.71 2.17 35.51 4.11
1995 3436 5.917545 ATATTCCGTTATAAGGGTTGGGT 57.082 39.130 20.71 8.63 35.51 4.51
1996 3437 5.708697 GGAATATTCCGTTATAAGGGTTGGG 59.291 44.000 18.61 1.31 37.65 4.12
1997 3438 6.812879 GGAATATTCCGTTATAAGGGTTGG 57.187 41.667 18.61 3.35 37.65 3.77
2011 3452 3.463944 ACGTCGTTCATGGGAATATTCC 58.536 45.455 24.14 24.14 46.82 3.01
2012 3453 4.331717 ACAACGTCGTTCATGGGAATATTC 59.668 41.667 7.86 6.93 35.05 1.75
2013 3454 4.258543 ACAACGTCGTTCATGGGAATATT 58.741 39.130 7.86 0.00 35.05 1.28
2014 3455 3.869065 ACAACGTCGTTCATGGGAATAT 58.131 40.909 7.86 0.00 35.05 1.28
2015 3456 3.255725 GACAACGTCGTTCATGGGAATA 58.744 45.455 7.86 0.00 35.05 1.75
2016 3457 2.073816 GACAACGTCGTTCATGGGAAT 58.926 47.619 7.86 0.00 35.05 3.01
2017 3458 1.504359 GACAACGTCGTTCATGGGAA 58.496 50.000 7.86 0.00 0.00 3.97
2018 3459 3.204505 GACAACGTCGTTCATGGGA 57.795 52.632 7.86 0.00 0.00 4.37
2045 3486 4.430765 CACCCCGTCGACTTCCCG 62.431 72.222 14.70 0.00 0.00 5.14
2046 3487 4.078516 CCACCCCGTCGACTTCCC 62.079 72.222 14.70 0.00 0.00 3.97
2047 3488 4.754667 GCCACCCCGTCGACTTCC 62.755 72.222 14.70 0.00 0.00 3.46
2048 3489 4.754667 GGCCACCCCGTCGACTTC 62.755 72.222 14.70 0.00 0.00 3.01
2071 3512 4.189188 CTGGTAGTCGCCCCGTCG 62.189 72.222 0.00 0.00 0.00 5.12
2072 3513 4.509737 GCTGGTAGTCGCCCCGTC 62.510 72.222 0.00 0.00 0.00 4.79
2079 3520 4.849329 GACCGCCGCTGGTAGTCG 62.849 72.222 6.85 0.00 44.01 4.18
2080 3521 4.849329 CGACCGCCGCTGGTAGTC 62.849 72.222 6.85 8.16 44.01 2.59
2108 3549 2.536997 AAATCCTCCCAACTCCCGCG 62.537 60.000 0.00 0.00 0.00 6.46
2109 3550 0.323451 AAAATCCTCCCAACTCCCGC 60.323 55.000 0.00 0.00 0.00 6.13
2110 3551 2.092323 GAAAAATCCTCCCAACTCCCG 58.908 52.381 0.00 0.00 0.00 5.14
2111 3552 2.457598 GGAAAAATCCTCCCAACTCCC 58.542 52.381 0.00 0.00 0.00 4.30
2132 3573 2.354773 GTTATCCTCGCGCGGGAG 60.355 66.667 37.71 37.71 36.21 4.30
2133 3574 3.908081 GGTTATCCTCGCGCGGGA 61.908 66.667 34.96 33.26 37.26 5.14
2135 3576 4.564116 ACGGTTATCCTCGCGCGG 62.564 66.667 31.69 20.19 0.00 6.46
2136 3577 3.022914 GACGGTTATCCTCGCGCG 61.023 66.667 26.76 26.76 0.00 6.86
2137 3578 1.079875 TTTGACGGTTATCCTCGCGC 61.080 55.000 0.00 0.00 0.00 6.86
2138 3579 1.257936 CATTTGACGGTTATCCTCGCG 59.742 52.381 0.00 0.00 0.00 5.87
2139 3580 2.540101 CTCATTTGACGGTTATCCTCGC 59.460 50.000 0.00 0.00 0.00 5.03
2140 3581 3.123804 CCTCATTTGACGGTTATCCTCG 58.876 50.000 0.00 0.00 0.00 4.63
2141 3582 3.118371 ACCCTCATTTGACGGTTATCCTC 60.118 47.826 0.00 0.00 30.87 3.71
2142 3583 2.844348 ACCCTCATTTGACGGTTATCCT 59.156 45.455 0.00 0.00 30.87 3.24
2143 3584 3.277142 ACCCTCATTTGACGGTTATCC 57.723 47.619 0.00 0.00 30.87 2.59
2144 3585 3.377172 CCAACCCTCATTTGACGGTTATC 59.623 47.826 11.89 0.00 40.04 1.75
2145 3586 3.352648 CCAACCCTCATTTGACGGTTAT 58.647 45.455 11.89 0.00 40.04 1.89
2146 3587 2.553466 CCCAACCCTCATTTGACGGTTA 60.553 50.000 11.89 0.00 40.04 2.85
2147 3588 1.616159 CCAACCCTCATTTGACGGTT 58.384 50.000 7.81 7.81 41.81 4.44
2148 3589 0.251165 CCCAACCCTCATTTGACGGT 60.251 55.000 0.00 0.00 35.44 4.83
2149 3590 0.965363 CCCCAACCCTCATTTGACGG 60.965 60.000 0.00 0.00 0.00 4.79
2150 3591 0.251165 ACCCCAACCCTCATTTGACG 60.251 55.000 0.00 0.00 0.00 4.35
2151 3592 2.620627 CCTACCCCAACCCTCATTTGAC 60.621 54.545 0.00 0.00 0.00 3.18
2152 3593 1.638589 CCTACCCCAACCCTCATTTGA 59.361 52.381 0.00 0.00 0.00 2.69
2153 3594 1.357761 ACCTACCCCAACCCTCATTTG 59.642 52.381 0.00 0.00 0.00 2.32
2154 3595 1.768265 ACCTACCCCAACCCTCATTT 58.232 50.000 0.00 0.00 0.00 2.32
2155 3596 1.768265 AACCTACCCCAACCCTCATT 58.232 50.000 0.00 0.00 0.00 2.57
2156 3597 1.768265 AAACCTACCCCAACCCTCAT 58.232 50.000 0.00 0.00 0.00 2.90
2157 3598 1.146152 CAAAACCTACCCCAACCCTCA 59.854 52.381 0.00 0.00 0.00 3.86
2158 3599 1.919240 CAAAACCTACCCCAACCCTC 58.081 55.000 0.00 0.00 0.00 4.30
2159 3600 0.178944 GCAAAACCTACCCCAACCCT 60.179 55.000 0.00 0.00 0.00 4.34
2160 3601 0.178944 AGCAAAACCTACCCCAACCC 60.179 55.000 0.00 0.00 0.00 4.11
2161 3602 1.254026 GAGCAAAACCTACCCCAACC 58.746 55.000 0.00 0.00 0.00 3.77
2162 3603 1.254026 GGAGCAAAACCTACCCCAAC 58.746 55.000 0.00 0.00 0.00 3.77
2163 3604 0.113580 GGGAGCAAAACCTACCCCAA 59.886 55.000 0.00 0.00 35.00 4.12
2164 3605 1.771646 GGGAGCAAAACCTACCCCA 59.228 57.895 0.00 0.00 35.00 4.96
2165 3606 4.757773 GGGAGCAAAACCTACCCC 57.242 61.111 0.00 0.00 35.00 4.95
2167 3608 1.254026 GTTGGGGAGCAAAACCTACC 58.746 55.000 0.00 0.00 34.88 3.18
2168 3609 1.254026 GGTTGGGGAGCAAAACCTAC 58.746 55.000 0.00 0.00 40.22 3.18
2169 3610 0.113580 GGGTTGGGGAGCAAAACCTA 59.886 55.000 4.00 0.00 42.50 3.08
2170 3611 1.152333 GGGTTGGGGAGCAAAACCT 60.152 57.895 4.00 0.00 42.50 3.50
2171 3612 0.762842 AAGGGTTGGGGAGCAAAACC 60.763 55.000 0.00 0.00 42.21 3.27
2172 3613 1.616865 GTAAGGGTTGGGGAGCAAAAC 59.383 52.381 0.00 0.00 0.00 2.43
2173 3614 1.501604 AGTAAGGGTTGGGGAGCAAAA 59.498 47.619 0.00 0.00 0.00 2.44
2174 3615 1.154430 AGTAAGGGTTGGGGAGCAAA 58.846 50.000 0.00 0.00 0.00 3.68
2175 3616 1.154430 AAGTAAGGGTTGGGGAGCAA 58.846 50.000 0.00 0.00 0.00 3.91
2176 3617 1.154430 AAAGTAAGGGTTGGGGAGCA 58.846 50.000 0.00 0.00 0.00 4.26
2177 3618 1.893137 CAAAAGTAAGGGTTGGGGAGC 59.107 52.381 0.00 0.00 0.00 4.70
2178 3619 3.421844 CTCAAAAGTAAGGGTTGGGGAG 58.578 50.000 0.00 0.00 0.00 4.30
2179 3620 2.109304 CCTCAAAAGTAAGGGTTGGGGA 59.891 50.000 0.00 0.00 44.39 4.81
2180 3621 2.109304 TCCTCAAAAGTAAGGGTTGGGG 59.891 50.000 0.00 0.00 43.21 4.96
2181 3622 3.518992 TCCTCAAAAGTAAGGGTTGGG 57.481 47.619 0.00 0.00 33.21 4.12
2182 3623 5.391312 CAATCCTCAAAAGTAAGGGTTGG 57.609 43.478 6.52 0.00 45.94 3.77
2184 3625 4.107311 TCCCAATCCTCAAAAGTAAGGGTT 59.893 41.667 0.00 0.00 36.39 4.11
2185 3626 3.660669 TCCCAATCCTCAAAAGTAAGGGT 59.339 43.478 0.00 0.00 35.31 4.34
2186 3627 4.018415 TCTCCCAATCCTCAAAAGTAAGGG 60.018 45.833 0.00 0.00 33.21 3.95
2187 3628 5.179452 TCTCCCAATCCTCAAAAGTAAGG 57.821 43.478 0.00 0.00 0.00 2.69
2188 3629 5.045578 TCCTCTCCCAATCCTCAAAAGTAAG 60.046 44.000 0.00 0.00 0.00 2.34
2189 3630 4.849810 TCCTCTCCCAATCCTCAAAAGTAA 59.150 41.667 0.00 0.00 0.00 2.24
2190 3631 4.435137 TCCTCTCCCAATCCTCAAAAGTA 58.565 43.478 0.00 0.00 0.00 2.24
2191 3632 3.260205 TCCTCTCCCAATCCTCAAAAGT 58.740 45.455 0.00 0.00 0.00 2.66
2192 3633 4.516652 ATCCTCTCCCAATCCTCAAAAG 57.483 45.455 0.00 0.00 0.00 2.27
2193 3634 4.953781 AATCCTCTCCCAATCCTCAAAA 57.046 40.909 0.00 0.00 0.00 2.44
2194 3635 4.292041 TCAAATCCTCTCCCAATCCTCAAA 59.708 41.667 0.00 0.00 0.00 2.69
2195 3636 3.851976 TCAAATCCTCTCCCAATCCTCAA 59.148 43.478 0.00 0.00 0.00 3.02
2196 3637 3.457380 CTCAAATCCTCTCCCAATCCTCA 59.543 47.826 0.00 0.00 0.00 3.86
2197 3638 3.181446 CCTCAAATCCTCTCCCAATCCTC 60.181 52.174 0.00 0.00 0.00 3.71
2198 3639 2.782341 CCTCAAATCCTCTCCCAATCCT 59.218 50.000 0.00 0.00 0.00 3.24
2199 3640 2.158549 CCCTCAAATCCTCTCCCAATCC 60.159 54.545 0.00 0.00 0.00 3.01
2200 3641 2.511637 ACCCTCAAATCCTCTCCCAATC 59.488 50.000 0.00 0.00 0.00 2.67
2201 3642 2.577970 ACCCTCAAATCCTCTCCCAAT 58.422 47.619 0.00 0.00 0.00 3.16
2202 3643 2.041620 CAACCCTCAAATCCTCTCCCAA 59.958 50.000 0.00 0.00 0.00 4.12
2203 3644 1.635487 CAACCCTCAAATCCTCTCCCA 59.365 52.381 0.00 0.00 0.00 4.37
2204 3645 1.064389 CCAACCCTCAAATCCTCTCCC 60.064 57.143 0.00 0.00 0.00 4.30
2205 3646 1.916181 TCCAACCCTCAAATCCTCTCC 59.084 52.381 0.00 0.00 0.00 3.71
2206 3647 2.356227 GGTCCAACCCTCAAATCCTCTC 60.356 54.545 0.00 0.00 30.04 3.20
2207 3648 1.636003 GGTCCAACCCTCAAATCCTCT 59.364 52.381 0.00 0.00 30.04 3.69
2208 3649 1.636003 AGGTCCAACCCTCAAATCCTC 59.364 52.381 0.00 0.00 39.75 3.71
2209 3650 1.760405 AGGTCCAACCCTCAAATCCT 58.240 50.000 0.00 0.00 39.75 3.24
2210 3651 2.604912 AAGGTCCAACCCTCAAATCC 57.395 50.000 0.00 0.00 39.75 3.01
2211 3652 6.605471 ATTTAAAGGTCCAACCCTCAAATC 57.395 37.500 0.00 0.00 39.75 2.17
2212 3653 8.499288 TTTATTTAAAGGTCCAACCCTCAAAT 57.501 30.769 0.00 0.00 39.75 2.32
2213 3654 7.916077 TTTATTTAAAGGTCCAACCCTCAAA 57.084 32.000 0.00 0.00 39.75 2.69
2214 3655 8.499288 AATTTATTTAAAGGTCCAACCCTCAA 57.501 30.769 0.00 0.00 39.75 3.02
2215 3656 8.371699 CAAATTTATTTAAAGGTCCAACCCTCA 58.628 33.333 0.00 0.00 39.75 3.86
2216 3657 8.590204 TCAAATTTATTTAAAGGTCCAACCCTC 58.410 33.333 0.00 0.00 39.75 4.30
2217 3658 8.499288 TCAAATTTATTTAAAGGTCCAACCCT 57.501 30.769 0.00 0.00 39.75 4.34
2218 3659 7.822334 CCTCAAATTTATTTAAAGGTCCAACCC 59.178 37.037 0.00 0.00 39.75 4.11
2219 3660 7.822334 CCCTCAAATTTATTTAAAGGTCCAACC 59.178 37.037 11.71 0.00 38.99 3.77
2220 3661 8.372459 ACCCTCAAATTTATTTAAAGGTCCAAC 58.628 33.333 11.71 0.00 33.41 3.77
2221 3662 8.499288 ACCCTCAAATTTATTTAAAGGTCCAA 57.501 30.769 11.71 0.00 33.41 3.53
2222 3663 8.499288 AACCCTCAAATTTATTTAAAGGTCCA 57.501 30.769 11.71 0.00 33.41 4.02
2223 3664 9.214957 CAAACCCTCAAATTTATTTAAAGGTCC 57.785 33.333 11.71 0.00 33.41 4.46
2224 3665 9.990360 TCAAACCCTCAAATTTATTTAAAGGTC 57.010 29.630 11.71 0.00 33.41 3.85
2225 3666 9.996554 CTCAAACCCTCAAATTTATTTAAAGGT 57.003 29.630 11.71 6.03 33.41 3.50
2226 3667 9.435688 CCTCAAACCCTCAAATTTATTTAAAGG 57.564 33.333 0.00 8.05 34.30 3.11
2227 3668 9.435688 CCCTCAAACCCTCAAATTTATTTAAAG 57.564 33.333 0.00 0.00 0.00 1.85
2228 3669 8.939932 ACCCTCAAACCCTCAAATTTATTTAAA 58.060 29.630 0.00 0.00 0.00 1.52
2229 3670 8.499288 ACCCTCAAACCCTCAAATTTATTTAA 57.501 30.769 0.00 0.00 0.00 1.52
2230 3671 8.499288 AACCCTCAAACCCTCAAATTTATTTA 57.501 30.769 0.00 0.00 0.00 1.40
2231 3672 7.387265 AACCCTCAAACCCTCAAATTTATTT 57.613 32.000 0.00 0.00 0.00 1.40
2232 3673 8.499288 TTAACCCTCAAACCCTCAAATTTATT 57.501 30.769 0.00 0.00 0.00 1.40
2233 3674 7.180229 CCTTAACCCTCAAACCCTCAAATTTAT 59.820 37.037 0.00 0.00 0.00 1.40
2234 3675 6.495526 CCTTAACCCTCAAACCCTCAAATTTA 59.504 38.462 0.00 0.00 0.00 1.40
2235 3676 5.306937 CCTTAACCCTCAAACCCTCAAATTT 59.693 40.000 0.00 0.00 0.00 1.82
2236 3677 4.838423 CCTTAACCCTCAAACCCTCAAATT 59.162 41.667 0.00 0.00 0.00 1.82
2237 3678 4.416516 CCTTAACCCTCAAACCCTCAAAT 58.583 43.478 0.00 0.00 0.00 2.32
2238 3679 3.437344 CCCTTAACCCTCAAACCCTCAAA 60.437 47.826 0.00 0.00 0.00 2.69
2239 3680 2.109304 CCCTTAACCCTCAAACCCTCAA 59.891 50.000 0.00 0.00 0.00 3.02
2240 3681 1.708551 CCCTTAACCCTCAAACCCTCA 59.291 52.381 0.00 0.00 0.00 3.86
2241 3682 1.005569 CCCCTTAACCCTCAAACCCTC 59.994 57.143 0.00 0.00 0.00 4.30
2242 3683 1.081481 CCCCTTAACCCTCAAACCCT 58.919 55.000 0.00 0.00 0.00 4.34
2243 3684 0.781920 ACCCCTTAACCCTCAAACCC 59.218 55.000 0.00 0.00 0.00 4.11
2244 3685 2.109480 AGAACCCCTTAACCCTCAAACC 59.891 50.000 0.00 0.00 0.00 3.27
2245 3686 3.520691 AGAACCCCTTAACCCTCAAAC 57.479 47.619 0.00 0.00 0.00 2.93
2246 3687 4.245308 ACTAGAACCCCTTAACCCTCAAA 58.755 43.478 0.00 0.00 0.00 2.69
2247 3688 3.842436 GACTAGAACCCCTTAACCCTCAA 59.158 47.826 0.00 0.00 0.00 3.02
2248 3689 3.078612 AGACTAGAACCCCTTAACCCTCA 59.921 47.826 0.00 0.00 0.00 3.86
2249 3690 3.722172 AGACTAGAACCCCTTAACCCTC 58.278 50.000 0.00 0.00 0.00 4.30
2250 3691 3.868476 AGACTAGAACCCCTTAACCCT 57.132 47.619 0.00 0.00 0.00 4.34
2251 3692 3.382865 CGTAGACTAGAACCCCTTAACCC 59.617 52.174 0.00 0.00 0.00 4.11
2252 3693 3.382865 CCGTAGACTAGAACCCCTTAACC 59.617 52.174 0.00 0.00 0.00 2.85
2253 3694 3.181482 GCCGTAGACTAGAACCCCTTAAC 60.181 52.174 0.00 0.00 0.00 2.01
2254 3695 3.026694 GCCGTAGACTAGAACCCCTTAA 58.973 50.000 0.00 0.00 0.00 1.85
2255 3696 2.243221 AGCCGTAGACTAGAACCCCTTA 59.757 50.000 0.00 0.00 0.00 2.69
2256 3697 1.006878 AGCCGTAGACTAGAACCCCTT 59.993 52.381 0.00 0.00 0.00 3.95
2257 3698 0.630134 AGCCGTAGACTAGAACCCCT 59.370 55.000 0.00 0.00 0.00 4.79
2258 3699 1.031235 GAGCCGTAGACTAGAACCCC 58.969 60.000 0.00 0.00 0.00 4.95
2259 3700 2.055684 AGAGCCGTAGACTAGAACCC 57.944 55.000 0.00 0.00 0.00 4.11
2260 3701 4.453177 AAAAGAGCCGTAGACTAGAACC 57.547 45.455 0.00 0.00 0.00 3.62
2261 3702 4.558080 CGAAAAAGAGCCGTAGACTAGAAC 59.442 45.833 0.00 0.00 0.00 3.01
2262 3703 4.456911 TCGAAAAAGAGCCGTAGACTAGAA 59.543 41.667 0.00 0.00 0.00 2.10
2263 3704 4.005650 TCGAAAAAGAGCCGTAGACTAGA 58.994 43.478 0.00 0.00 0.00 2.43
2264 3705 4.097012 GTCGAAAAAGAGCCGTAGACTAG 58.903 47.826 0.00 0.00 0.00 2.57
2265 3706 3.425359 CGTCGAAAAAGAGCCGTAGACTA 60.425 47.826 0.00 0.00 0.00 2.59
2266 3707 2.667724 CGTCGAAAAAGAGCCGTAGACT 60.668 50.000 0.00 0.00 0.00 3.24
2267 3708 1.647702 CGTCGAAAAAGAGCCGTAGAC 59.352 52.381 0.00 0.00 0.00 2.59
2268 3709 1.536766 TCGTCGAAAAAGAGCCGTAGA 59.463 47.619 0.00 0.00 0.00 2.59
2269 3710 1.973138 TCGTCGAAAAAGAGCCGTAG 58.027 50.000 0.00 0.00 0.00 3.51
2270 3711 2.420628 TTCGTCGAAAAAGAGCCGTA 57.579 45.000 4.91 0.00 0.00 4.02
2271 3712 1.574134 TTTCGTCGAAAAAGAGCCGT 58.426 45.000 17.73 0.00 0.00 5.68
2272 3713 2.033151 AGTTTTCGTCGAAAAAGAGCCG 60.033 45.455 29.26 0.00 42.09 5.52
2273 3714 3.242641 ACAGTTTTCGTCGAAAAAGAGCC 60.243 43.478 29.26 18.57 42.09 4.70
2274 3715 3.936661 ACAGTTTTCGTCGAAAAAGAGC 58.063 40.909 29.26 18.88 42.09 4.09
2275 3716 7.942145 TTTTACAGTTTTCGTCGAAAAAGAG 57.058 32.000 29.26 23.16 42.09 2.85
2299 3740 9.554395 CATCAAACCCCTAAAAATAACTGTTTT 57.446 29.630 0.00 0.00 32.94 2.43
2300 3741 8.154203 CCATCAAACCCCTAAAAATAACTGTTT 58.846 33.333 0.00 0.00 0.00 2.83
2301 3742 7.291416 ACCATCAAACCCCTAAAAATAACTGTT 59.709 33.333 0.00 0.00 0.00 3.16
2302 3743 6.785466 ACCATCAAACCCCTAAAAATAACTGT 59.215 34.615 0.00 0.00 0.00 3.55
2303 3744 7.239763 ACCATCAAACCCCTAAAAATAACTG 57.760 36.000 0.00 0.00 0.00 3.16
2304 3745 7.733047 AGAACCATCAAACCCCTAAAAATAACT 59.267 33.333 0.00 0.00 0.00 2.24
2305 3746 7.903145 AGAACCATCAAACCCCTAAAAATAAC 58.097 34.615 0.00 0.00 0.00 1.89
2306 3747 9.027202 GTAGAACCATCAAACCCCTAAAAATAA 57.973 33.333 0.00 0.00 0.00 1.40
2307 3748 8.395605 AGTAGAACCATCAAACCCCTAAAAATA 58.604 33.333 0.00 0.00 0.00 1.40
2308 3749 7.246027 AGTAGAACCATCAAACCCCTAAAAAT 58.754 34.615 0.00 0.00 0.00 1.82
2309 3750 6.616577 AGTAGAACCATCAAACCCCTAAAAA 58.383 36.000 0.00 0.00 0.00 1.94
2310 3751 6.208840 AGTAGAACCATCAAACCCCTAAAA 57.791 37.500 0.00 0.00 0.00 1.52
2311 3752 5.853572 AGTAGAACCATCAAACCCCTAAA 57.146 39.130 0.00 0.00 0.00 1.85
2312 3753 6.027482 ACTAGTAGAACCATCAAACCCCTAA 58.973 40.000 3.59 0.00 0.00 2.69
2313 3754 5.596763 ACTAGTAGAACCATCAAACCCCTA 58.403 41.667 3.59 0.00 0.00 3.53
2314 3755 4.436079 ACTAGTAGAACCATCAAACCCCT 58.564 43.478 3.59 0.00 0.00 4.79
2315 3756 4.838904 ACTAGTAGAACCATCAAACCCC 57.161 45.455 3.59 0.00 0.00 4.95
2316 3757 6.260271 GCATTACTAGTAGAACCATCAAACCC 59.740 42.308 3.59 0.00 0.00 4.11
2317 3758 7.048512 AGCATTACTAGTAGAACCATCAAACC 58.951 38.462 3.59 0.00 0.00 3.27
2318 3759 7.982354 AGAGCATTACTAGTAGAACCATCAAAC 59.018 37.037 3.59 0.00 0.00 2.93
2319 3760 8.079211 AGAGCATTACTAGTAGAACCATCAAA 57.921 34.615 3.59 0.00 0.00 2.69
2320 3761 7.661536 AGAGCATTACTAGTAGAACCATCAA 57.338 36.000 3.59 0.00 0.00 2.57
2321 3762 8.762481 TTAGAGCATTACTAGTAGAACCATCA 57.238 34.615 3.59 0.00 0.00 3.07
2322 3763 9.632807 CATTAGAGCATTACTAGTAGAACCATC 57.367 37.037 3.59 0.00 0.00 3.51
2323 3764 8.091449 GCATTAGAGCATTACTAGTAGAACCAT 58.909 37.037 3.59 0.00 0.00 3.55
2324 3765 7.287927 AGCATTAGAGCATTACTAGTAGAACCA 59.712 37.037 3.59 0.00 36.85 3.67
2325 3766 7.662897 AGCATTAGAGCATTACTAGTAGAACC 58.337 38.462 3.59 0.00 36.85 3.62
2326 3767 8.973378 CAAGCATTAGAGCATTACTAGTAGAAC 58.027 37.037 3.59 0.00 36.85 3.01
2327 3768 8.914011 TCAAGCATTAGAGCATTACTAGTAGAA 58.086 33.333 3.59 0.00 36.85 2.10
2328 3769 8.465273 TCAAGCATTAGAGCATTACTAGTAGA 57.535 34.615 3.59 0.00 36.85 2.59
2329 3770 8.356657 ACTCAAGCATTAGAGCATTACTAGTAG 58.643 37.037 2.23 0.00 35.28 2.57
2330 3771 8.239038 ACTCAAGCATTAGAGCATTACTAGTA 57.761 34.615 0.00 0.00 35.28 1.82
2331 3772 7.118496 ACTCAAGCATTAGAGCATTACTAGT 57.882 36.000 0.00 0.00 35.28 2.57
2332 3773 9.190858 CTTACTCAAGCATTAGAGCATTACTAG 57.809 37.037 0.00 0.00 35.28 2.57
2333 3774 8.914011 TCTTACTCAAGCATTAGAGCATTACTA 58.086 33.333 0.00 0.00 35.28 1.82
2334 3775 7.786030 TCTTACTCAAGCATTAGAGCATTACT 58.214 34.615 0.00 0.00 35.28 2.24
2335 3776 7.170658 CCTCTTACTCAAGCATTAGAGCATTAC 59.829 40.741 0.00 0.00 35.28 1.89
2336 3777 7.212976 CCTCTTACTCAAGCATTAGAGCATTA 58.787 38.462 0.00 0.00 35.28 1.90
2337 3778 6.054295 CCTCTTACTCAAGCATTAGAGCATT 58.946 40.000 0.00 0.00 35.28 3.56
2338 3779 5.454471 CCCTCTTACTCAAGCATTAGAGCAT 60.454 44.000 0.00 0.00 35.28 3.79
2339 3780 4.141846 CCCTCTTACTCAAGCATTAGAGCA 60.142 45.833 0.00 0.00 35.28 4.26
2340 3781 4.141824 ACCCTCTTACTCAAGCATTAGAGC 60.142 45.833 0.00 0.00 35.28 4.09
2341 3782 5.105146 ACACCCTCTTACTCAAGCATTAGAG 60.105 44.000 0.00 0.00 37.87 2.43
2342 3783 4.777896 ACACCCTCTTACTCAAGCATTAGA 59.222 41.667 0.00 0.00 0.00 2.10
2407 3885 0.747283 GGAGAGACCAAGCTGCCATG 60.747 60.000 0.00 0.00 38.79 3.66
2413 3891 4.706842 TTACAAAAGGAGAGACCAAGCT 57.293 40.909 0.00 0.00 42.04 3.74
2416 3894 8.533569 AAGAAAATTACAAAAGGAGAGACCAA 57.466 30.769 0.00 0.00 42.04 3.67
2442 4174 7.334844 AGTTAAAAGAAAGACCAGGTCAAAG 57.665 36.000 22.31 0.00 34.60 2.77
2491 4223 1.637553 AGATCACTGCCACCTCCATTT 59.362 47.619 0.00 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.