Multiple sequence alignment - TraesCS2B01G203500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G203500 chr2B 100.000 3262 0 0 1 3262 183198128 183201389 0.000000e+00 6024.0
1 TraesCS2B01G203500 chr2B 87.283 1093 89 19 859 1919 183012952 183014026 0.000000e+00 1203.0
2 TraesCS2B01G203500 chr2B 93.139 685 40 5 2120 2804 183063234 183063911 0.000000e+00 998.0
3 TraesCS2B01G203500 chr2B 86.659 922 78 25 873 1778 182936171 182937063 0.000000e+00 979.0
4 TraesCS2B01G203500 chr2B 87.148 887 81 10 859 1725 183129042 183129915 0.000000e+00 976.0
5 TraesCS2B01G203500 chr2B 93.234 606 31 6 2120 2719 183130224 183130825 0.000000e+00 883.0
6 TraesCS2B01G203500 chr2B 86.905 588 74 3 94 679 183059253 183059839 0.000000e+00 656.0
7 TraesCS2B01G203500 chr2B 86.802 591 75 3 94 682 183127624 183128213 0.000000e+00 656.0
8 TraesCS2B01G203500 chr2B 92.208 462 36 0 2801 3262 439649068 439648607 0.000000e+00 654.0
9 TraesCS2B01G203500 chr2B 91.613 465 39 0 2798 3262 246356198 246356662 0.000000e+00 643.0
10 TraesCS2B01G203500 chr2B 88.534 532 48 7 859 1379 183060668 183061197 1.650000e-177 632.0
11 TraesCS2B01G203500 chr2B 85.548 602 73 8 94 682 183011772 183012372 4.620000e-173 617.0
12 TraesCS2B01G203500 chr2B 87.037 540 65 4 139 676 182958348 182958884 3.600000e-169 604.0
13 TraesCS2B01G203500 chr2B 90.949 453 31 3 860 1302 182959450 182959902 4.660000e-168 601.0
14 TraesCS2B01G203500 chr2B 85.580 319 34 4 1390 1708 183062570 183062876 1.130000e-84 324.0
15 TraesCS2B01G203500 chr2B 90.816 196 16 2 647 842 183012683 183012876 8.980000e-66 261.0
16 TraesCS2B01G203500 chr2B 87.137 241 17 7 2120 2360 183014198 183014424 8.980000e-66 261.0
17 TraesCS2B01G203500 chr2B 89.796 196 19 1 647 842 183128772 183128966 1.940000e-62 250.0
18 TraesCS2B01G203500 chr2B 88.945 199 18 4 647 842 183060395 183060592 3.250000e-60 243.0
19 TraesCS2B01G203500 chr2B 86.170 188 10 6 1744 1919 183062878 183063061 4.300000e-44 189.0
20 TraesCS2B01G203500 chr2B 93.976 83 5 0 2015 2097 183130075 183130157 3.420000e-25 126.0
21 TraesCS2B01G203500 chr2B 97.222 36 1 0 2062 2097 183014093 183014128 9.770000e-06 62.1
22 TraesCS2B01G203500 chr2B 97.222 36 1 0 2062 2097 183063129 183063164 9.770000e-06 62.1
23 TraesCS2B01G203500 chr2D 90.830 916 68 11 859 1772 129789006 129789907 0.000000e+00 1212.0
24 TraesCS2B01G203500 chr2D 89.765 850 70 11 1077 1919 129799144 129799983 0.000000e+00 1072.0
25 TraesCS2B01G203500 chr2D 94.307 685 32 3 2120 2804 129800172 129800849 0.000000e+00 1042.0
26 TraesCS2B01G203500 chr2D 91.122 597 47 2 985 1575 129352954 129353550 0.000000e+00 804.0
27 TraesCS2B01G203500 chr2D 86.074 517 69 2 985 1501 136181691 136181178 1.320000e-153 553.0
28 TraesCS2B01G203500 chr2D 87.629 291 31 3 310 599 129940950 129941236 1.880000e-87 333.0
29 TraesCS2B01G203500 chr2D 88.235 272 20 8 887 1147 129798905 129799175 6.790000e-82 315.0
30 TraesCS2B01G203500 chr2D 83.533 334 35 10 2096 2426 129355714 129356030 8.850000e-76 294.0
31 TraesCS2B01G203500 chr2D 90.306 196 18 1 644 839 129788744 129788938 4.180000e-64 255.0
32 TraesCS2B01G203500 chr2D 84.236 203 21 8 2424 2616 129356065 129356266 1.550000e-43 187.0
33 TraesCS2B01G203500 chr2D 96.471 85 3 0 2013 2097 129800018 129800102 1.220000e-29 141.0
34 TraesCS2B01G203500 chr2D 89.423 104 5 4 1822 1923 129789901 129790000 3.420000e-25 126.0
35 TraesCS2B01G203500 chr2D 87.273 110 10 4 859 967 129352770 129352876 4.420000e-24 122.0
36 TraesCS2B01G203500 chr2A 82.784 1092 107 43 859 1923 136125692 136126729 0.000000e+00 900.0
37 TraesCS2B01G203500 chr2A 81.752 137 18 5 2486 2616 144275002 144274867 1.240000e-19 108.0
38 TraesCS2B01G203500 chr3B 94.372 462 26 0 2801 3262 147151669 147151208 0.000000e+00 710.0
39 TraesCS2B01G203500 chr5B 93.939 462 28 0 2801 3262 239266314 239265853 0.000000e+00 699.0
40 TraesCS2B01G203500 chr5B 92.903 465 33 0 2798 3262 325532915 325533379 0.000000e+00 676.0
41 TraesCS2B01G203500 chr5B 92.424 462 34 1 2801 3262 644938640 644938180 0.000000e+00 658.0
42 TraesCS2B01G203500 chr6B 92.688 465 34 0 2798 3262 599824162 599824626 0.000000e+00 671.0
43 TraesCS2B01G203500 chrUn 92.641 462 34 0 2801 3262 214694909 214694448 0.000000e+00 665.0
44 TraesCS2B01G203500 chr4A 92.043 465 34 1 2801 3262 715774632 715774168 0.000000e+00 651.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G203500 chr2B 183198128 183201389 3261 False 6024.000000 6024 100.000000 1 3262 1 chr2B.!!$F2 3261
1 TraesCS2B01G203500 chr2B 182936171 182937063 892 False 979.000000 979 86.659000 873 1778 1 chr2B.!!$F1 905
2 TraesCS2B01G203500 chr2B 182958348 182959902 1554 False 602.500000 604 88.993000 139 1302 2 chr2B.!!$F4 1163
3 TraesCS2B01G203500 chr2B 183127624 183130825 3201 False 578.200000 976 90.191200 94 2719 5 chr2B.!!$F7 2625
4 TraesCS2B01G203500 chr2B 183011772 183014424 2652 False 480.820000 1203 89.601200 94 2360 5 chr2B.!!$F5 2266
5 TraesCS2B01G203500 chr2B 183059253 183063911 4658 False 443.442857 998 89.499286 94 2804 7 chr2B.!!$F6 2710
6 TraesCS2B01G203500 chr2D 129798905 129800849 1944 False 642.500000 1072 92.194500 887 2804 4 chr2D.!!$F4 1917
7 TraesCS2B01G203500 chr2D 136181178 136181691 513 True 553.000000 553 86.074000 985 1501 1 chr2D.!!$R1 516
8 TraesCS2B01G203500 chr2D 129788744 129790000 1256 False 531.000000 1212 90.186333 644 1923 3 chr2D.!!$F3 1279
9 TraesCS2B01G203500 chr2D 129352770 129356266 3496 False 351.750000 804 86.541000 859 2616 4 chr2D.!!$F2 1757
10 TraesCS2B01G203500 chr2A 136125692 136126729 1037 False 900.000000 900 82.784000 859 1923 1 chr2A.!!$F1 1064

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
60 61 0.250234 TCCATGCCTGTTCTCGAAGG 59.750 55.0 0.0 0.0 36.58 3.46 F
1281 2337 0.397675 TCCTCTGCCCTGATGACGAT 60.398 55.0 0.0 0.0 0.00 3.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1501 3940 0.243907 ACGACAGTCTTGGTGATCCG 59.756 55.0 0.0 0.0 36.3 4.18 R
3145 7376 0.034186 AGCCTCATCCCAAATGCGAA 60.034 50.0 0.0 0.0 0.0 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.781945 CTCATAAAGGCGAAATGGGC 57.218 50.000 0.00 0.00 0.00 5.36
36 37 2.440065 CCCAGGCCTGCGCATTTA 60.440 61.111 28.39 0.00 36.38 1.40
37 38 2.051518 CCCAGGCCTGCGCATTTAA 61.052 57.895 28.39 0.00 36.38 1.52
38 39 1.139520 CCAGGCCTGCGCATTTAAC 59.860 57.895 28.39 0.00 36.38 2.01
39 40 1.226379 CAGGCCTGCGCATTTAACG 60.226 57.895 22.33 0.00 36.38 3.18
40 41 1.674322 AGGCCTGCGCATTTAACGT 60.674 52.632 12.24 0.00 36.38 3.99
41 42 1.211709 GGCCTGCGCATTTAACGTT 59.788 52.632 12.24 5.88 36.38 3.99
42 43 0.796870 GGCCTGCGCATTTAACGTTC 60.797 55.000 12.24 0.00 36.38 3.95
43 44 0.796870 GCCTGCGCATTTAACGTTCC 60.797 55.000 12.24 0.00 34.03 3.62
44 45 0.519519 CCTGCGCATTTAACGTTCCA 59.480 50.000 12.24 0.00 0.00 3.53
45 46 1.132262 CCTGCGCATTTAACGTTCCAT 59.868 47.619 12.24 0.00 0.00 3.41
46 47 2.176369 CTGCGCATTTAACGTTCCATG 58.824 47.619 12.24 9.64 0.00 3.66
47 48 0.913876 GCGCATTTAACGTTCCATGC 59.086 50.000 24.72 24.72 38.96 4.06
48 49 1.544686 CGCATTTAACGTTCCATGCC 58.455 50.000 26.81 15.76 39.12 4.40
49 50 1.132262 CGCATTTAACGTTCCATGCCT 59.868 47.619 26.81 0.00 39.12 4.75
50 51 2.529151 GCATTTAACGTTCCATGCCTG 58.471 47.619 24.39 9.00 36.77 4.85
51 52 2.094752 GCATTTAACGTTCCATGCCTGT 60.095 45.455 24.39 0.00 36.77 4.00
52 53 3.613910 GCATTTAACGTTCCATGCCTGTT 60.614 43.478 24.39 0.00 36.77 3.16
53 54 3.907894 TTTAACGTTCCATGCCTGTTC 57.092 42.857 2.82 0.00 0.00 3.18
54 55 2.851263 TAACGTTCCATGCCTGTTCT 57.149 45.000 2.82 0.00 0.00 3.01
55 56 1.523758 AACGTTCCATGCCTGTTCTC 58.476 50.000 0.00 0.00 0.00 2.87
56 57 0.670546 ACGTTCCATGCCTGTTCTCG 60.671 55.000 0.00 0.00 0.00 4.04
57 58 0.389817 CGTTCCATGCCTGTTCTCGA 60.390 55.000 0.00 0.00 0.00 4.04
58 59 1.808411 GTTCCATGCCTGTTCTCGAA 58.192 50.000 0.00 0.00 0.00 3.71
59 60 1.734465 GTTCCATGCCTGTTCTCGAAG 59.266 52.381 0.00 0.00 0.00 3.79
60 61 0.250234 TCCATGCCTGTTCTCGAAGG 59.750 55.000 0.00 0.00 36.58 3.46
65 66 2.846371 CCTGTTCTCGAAGGCAAGG 58.154 57.895 0.00 0.00 0.00 3.61
66 67 1.301677 CCTGTTCTCGAAGGCAAGGC 61.302 60.000 0.00 0.00 0.00 4.35
85 86 4.450122 CGCATGCTGGCACGACAC 62.450 66.667 17.13 0.00 0.00 3.67
86 87 4.450122 GCATGCTGGCACGACACG 62.450 66.667 11.37 0.00 0.00 4.49
87 88 3.043713 CATGCTGGCACGACACGT 61.044 61.111 0.00 0.00 42.36 4.49
88 89 2.738521 ATGCTGGCACGACACGTC 60.739 61.111 0.00 0.00 38.32 4.34
89 90 3.513768 ATGCTGGCACGACACGTCA 62.514 57.895 0.00 0.00 38.32 4.35
90 91 3.702555 GCTGGCACGACACGTCAC 61.703 66.667 0.00 0.00 38.32 3.67
91 92 2.279186 CTGGCACGACACGTCACA 60.279 61.111 0.00 0.00 38.32 3.58
92 93 2.583868 TGGCACGACACGTCACAC 60.584 61.111 0.00 0.00 38.32 3.82
121 122 2.347114 CCTCCATGTGCCGTGTCA 59.653 61.111 0.00 0.00 0.00 3.58
125 126 2.098871 CATGTGCCGTGTCATGCG 59.901 61.111 0.00 0.00 35.72 4.73
182 193 1.000607 GCCGACCAAAAACCCTCTTTC 60.001 52.381 0.00 0.00 0.00 2.62
207 218 3.144120 CTGCTCTGCGCCGGATACT 62.144 63.158 5.05 0.00 38.05 2.12
221 232 3.377172 CCGGATACTCGGCTTTGAAAAAT 59.623 43.478 0.00 0.00 43.71 1.82
253 264 1.002684 ACACACGAGAACGACTGAGTC 60.003 52.381 1.65 1.65 42.66 3.36
254 265 1.264557 CACACGAGAACGACTGAGTCT 59.735 52.381 11.26 0.00 42.66 3.24
284 295 1.476891 GCCGTGTATCCAGTTCAGAGA 59.523 52.381 0.00 0.00 0.00 3.10
285 296 2.480416 GCCGTGTATCCAGTTCAGAGAG 60.480 54.545 0.00 0.00 0.00 3.20
331 343 4.753233 CTTTCAACTCGAGATCCAGTGAT 58.247 43.478 21.68 0.00 0.00 3.06
342 354 4.096190 GATCCAGTGATCAACCCATCAT 57.904 45.455 0.00 0.00 45.63 2.45
346 358 6.017211 TCCAGTGATCAACCCATCATAATT 57.983 37.500 0.00 0.00 35.23 1.40
355 367 1.172180 CCATCATAATTGGCGGCGGT 61.172 55.000 9.78 0.00 0.00 5.68
435 448 1.536073 CCTTGTCGTCCTCTCAGCCA 61.536 60.000 0.00 0.00 0.00 4.75
440 453 1.984570 CGTCCTCTCAGCCAAGGGA 60.985 63.158 0.00 0.00 33.21 4.20
546 560 3.461773 GCTACCAGAGGAGCGCCA 61.462 66.667 9.88 0.00 36.29 5.69
564 578 1.002366 CATCGACGAAGAAGCCAAGG 58.998 55.000 0.00 0.00 0.00 3.61
567 581 1.302511 GACGAAGAAGCCAAGGCCA 60.303 57.895 5.01 0.00 43.17 5.36
575 589 1.466851 AAGCCAAGGCCAAGCAAGAC 61.467 55.000 5.01 0.00 43.17 3.01
580 594 2.281484 GGCCAAGCAAGACGGTCA 60.281 61.111 11.27 0.00 0.00 4.02
585 599 1.645034 CAAGCAAGACGGTCATCGAT 58.355 50.000 11.27 0.00 42.43 3.59
675 1567 5.294356 ACACGAGGCGCTAAATATAATTGA 58.706 37.500 7.64 0.00 0.00 2.57
721 1618 0.457851 TTTTGGCCACAAGTTCACGG 59.542 50.000 3.88 0.00 37.97 4.94
744 1641 1.196808 GCAAACATACCAGGACGTGTG 59.803 52.381 0.00 0.00 0.00 3.82
793 1691 3.243301 GGAAAGTCCCACGAAGAAAAACC 60.243 47.826 0.00 0.00 0.00 3.27
856 1800 2.753966 GGCACGCGCATTCACTCAT 61.754 57.895 5.73 0.00 41.24 2.90
1275 2331 2.364842 ACGCTCCTCTGCCCTGAT 60.365 61.111 0.00 0.00 0.00 2.90
1281 2337 0.397675 TCCTCTGCCCTGATGACGAT 60.398 55.000 0.00 0.00 0.00 3.73
1288 2344 2.528743 CCTGATGACGATGCGGTGC 61.529 63.158 0.00 0.00 0.00 5.01
1326 2382 1.101635 TCCATAGCCTCACCGTCGAG 61.102 60.000 0.00 0.00 0.00 4.04
1382 3791 2.442272 GGCCTACTCCGAGGAGCA 60.442 66.667 18.37 5.47 45.54 4.26
1399 3832 2.203907 AGCTCAGCTGGGTCCACT 60.204 61.111 16.66 0.00 37.57 4.00
1402 3835 1.915266 CTCAGCTGGGTCCACTGGA 60.915 63.158 15.13 0.00 32.19 3.86
1501 3940 3.110178 CGTCACGAAACGAGGCCC 61.110 66.667 0.00 0.00 45.37 5.80
1523 3962 0.243907 ATCACCAAGACTGTCGTCGG 59.756 55.000 1.52 6.87 44.93 4.79
1590 4029 1.407979 GCAGATCCCAAGCCTCAAATG 59.592 52.381 0.00 0.00 0.00 2.32
1636 4078 6.257630 AGTTATCGTCGTCCTTCTAGTACTTC 59.742 42.308 0.00 0.00 0.00 3.01
1680 4122 2.031944 GTGAGTTTTCTTTCCTCACGCC 60.032 50.000 3.56 0.00 43.81 5.68
1742 5163 1.035932 ACGTACGCCTGTCCATAGCT 61.036 55.000 16.72 0.00 0.00 3.32
1811 5759 0.164647 CAGAGTTTTGAGCGCCTTCG 59.835 55.000 2.29 0.00 39.07 3.79
1898 5952 9.556030 GTAATTTAGATTTGGCTTTCTGTACAC 57.444 33.333 0.00 0.00 0.00 2.90
1901 5957 4.460263 AGATTTGGCTTTCTGTACACACA 58.540 39.130 0.00 0.00 0.00 3.72
1955 6011 9.841295 AAAATGCTTTTATATTACTAGGACGGA 57.159 29.630 0.00 0.00 0.00 4.69
1956 6012 9.490379 AAATGCTTTTATATTACTAGGACGGAG 57.510 33.333 0.00 0.00 0.00 4.63
1976 6032 8.754230 ACGGAGTGAGTAGTTTTAATTAACTC 57.246 34.615 0.00 2.58 42.51 3.01
1995 6051 9.757227 ATTAACTCACTATTATGCTCTCTGAAC 57.243 33.333 0.00 0.00 0.00 3.18
2090 6212 3.582780 CTTGAATTGCTCCAGCTTTTCC 58.417 45.455 0.00 0.00 42.66 3.13
2097 6219 2.821969 TGCTCCAGCTTTTCCAAATCTC 59.178 45.455 0.00 0.00 42.66 2.75
2101 6274 4.074970 TCCAGCTTTTCCAAATCTCACTC 58.925 43.478 0.00 0.00 0.00 3.51
2110 6283 8.668510 TTTTCCAAATCTCACTCTATCTATGC 57.331 34.615 0.00 0.00 0.00 3.14
2111 6284 7.609097 TTCCAAATCTCACTCTATCTATGCT 57.391 36.000 0.00 0.00 0.00 3.79
2112 6285 7.225784 TCCAAATCTCACTCTATCTATGCTC 57.774 40.000 0.00 0.00 0.00 4.26
2113 6286 6.779539 TCCAAATCTCACTCTATCTATGCTCA 59.220 38.462 0.00 0.00 0.00 4.26
2127 6300 5.363101 TCTATGCTCATTTAACCTGCAGAG 58.637 41.667 17.39 8.04 42.22 3.35
2130 6303 2.680339 GCTCATTTAACCTGCAGAGTCC 59.320 50.000 17.39 0.00 0.00 3.85
2166 6339 8.256611 TGCACTTGTATATCTTTGTTCTCTTC 57.743 34.615 0.00 0.00 0.00 2.87
2169 6342 8.386606 CACTTGTATATCTTTGTTCTCTTCTGC 58.613 37.037 0.00 0.00 0.00 4.26
2170 6343 7.550906 ACTTGTATATCTTTGTTCTCTTCTGCC 59.449 37.037 0.00 0.00 0.00 4.85
2178 6351 4.479993 CTCTTCTGCCCCGGCTGG 62.480 72.222 3.88 3.88 42.51 4.85
2198 6371 1.553704 GGAAGATGGTGTAAGGGTCGT 59.446 52.381 0.00 0.00 0.00 4.34
2200 6373 1.640917 AGATGGTGTAAGGGTCGTGT 58.359 50.000 0.00 0.00 0.00 4.49
2239 6412 2.034879 CCCGTGTCACTCCACATGC 61.035 63.158 0.65 0.00 34.98 4.06
2287 6463 4.116328 CGCTTCGGAGTGCCTCGA 62.116 66.667 0.00 0.00 0.00 4.04
2370 6550 5.798015 TCTCCGTCTTCGATGTATATAGC 57.202 43.478 0.00 0.00 39.71 2.97
2616 6845 2.308722 AAGCATCCGTCCATGGGGT 61.309 57.895 13.02 0.00 34.93 4.95
2805 7036 2.544267 CACGTTTCTCAGGTTGTTCCTC 59.456 50.000 0.00 0.00 46.24 3.71
2806 7037 2.143925 CGTTTCTCAGGTTGTTCCTCC 58.856 52.381 0.00 0.00 46.24 4.30
2807 7038 2.224305 CGTTTCTCAGGTTGTTCCTCCT 60.224 50.000 0.00 0.00 46.24 3.69
2808 7039 3.403968 GTTTCTCAGGTTGTTCCTCCTC 58.596 50.000 0.00 0.00 46.24 3.71
2809 7040 1.645710 TCTCAGGTTGTTCCTCCTCC 58.354 55.000 0.00 0.00 46.24 4.30
2810 7041 0.615850 CTCAGGTTGTTCCTCCTCCC 59.384 60.000 0.00 0.00 46.24 4.30
2811 7042 0.840722 TCAGGTTGTTCCTCCTCCCC 60.841 60.000 0.00 0.00 46.24 4.81
2812 7043 1.541620 AGGTTGTTCCTCCTCCCCC 60.542 63.158 0.00 0.00 44.42 5.40
2813 7044 2.669240 GTTGTTCCTCCTCCCCCG 59.331 66.667 0.00 0.00 0.00 5.73
2814 7045 2.206036 TTGTTCCTCCTCCCCCGT 59.794 61.111 0.00 0.00 0.00 5.28
2815 7046 1.916777 TTGTTCCTCCTCCCCCGTC 60.917 63.158 0.00 0.00 0.00 4.79
2816 7047 3.459063 GTTCCTCCTCCCCCGTCG 61.459 72.222 0.00 0.00 0.00 5.12
2820 7051 3.839432 CTCCTCCCCCGTCGCTTC 61.839 72.222 0.00 0.00 0.00 3.86
2821 7052 4.689549 TCCTCCCCCGTCGCTTCA 62.690 66.667 0.00 0.00 0.00 3.02
2822 7053 4.148825 CCTCCCCCGTCGCTTCAG 62.149 72.222 0.00 0.00 0.00 3.02
2823 7054 4.821589 CTCCCCCGTCGCTTCAGC 62.822 72.222 0.00 0.00 37.78 4.26
2825 7056 4.697756 CCCCCGTCGCTTCAGCAA 62.698 66.667 0.00 0.00 42.21 3.91
2826 7057 3.423154 CCCCGTCGCTTCAGCAAC 61.423 66.667 0.00 0.00 42.21 4.17
2827 7058 3.423154 CCCGTCGCTTCAGCAACC 61.423 66.667 0.00 0.00 42.21 3.77
2828 7059 3.423154 CCGTCGCTTCAGCAACCC 61.423 66.667 0.00 0.00 42.21 4.11
2829 7060 3.423154 CGTCGCTTCAGCAACCCC 61.423 66.667 0.00 0.00 42.21 4.95
2830 7061 3.423154 GTCGCTTCAGCAACCCCG 61.423 66.667 0.00 0.00 42.21 5.73
2831 7062 3.936203 TCGCTTCAGCAACCCCGT 61.936 61.111 0.00 0.00 42.21 5.28
2832 7063 3.423154 CGCTTCAGCAACCCCGTC 61.423 66.667 0.00 0.00 42.21 4.79
2833 7064 3.056328 GCTTCAGCAACCCCGTCC 61.056 66.667 0.00 0.00 41.59 4.79
2834 7065 2.742372 CTTCAGCAACCCCGTCCG 60.742 66.667 0.00 0.00 0.00 4.79
2835 7066 3.530910 CTTCAGCAACCCCGTCCGT 62.531 63.158 0.00 0.00 0.00 4.69
2836 7067 3.524648 TTCAGCAACCCCGTCCGTC 62.525 63.158 0.00 0.00 0.00 4.79
2839 7070 4.754667 GCAACCCCGTCCGTCCTC 62.755 72.222 0.00 0.00 0.00 3.71
2840 7071 2.995574 CAACCCCGTCCGTCCTCT 60.996 66.667 0.00 0.00 0.00 3.69
2841 7072 2.995574 AACCCCGTCCGTCCTCTG 60.996 66.667 0.00 0.00 0.00 3.35
2845 7076 3.827898 CCGTCCGTCCTCTGCCTC 61.828 72.222 0.00 0.00 0.00 4.70
2846 7077 3.827898 CGTCCGTCCTCTGCCTCC 61.828 72.222 0.00 0.00 0.00 4.30
2847 7078 3.462678 GTCCGTCCTCTGCCTCCC 61.463 72.222 0.00 0.00 0.00 4.30
2848 7079 3.992641 TCCGTCCTCTGCCTCCCA 61.993 66.667 0.00 0.00 0.00 4.37
2849 7080 2.765807 CCGTCCTCTGCCTCCCAT 60.766 66.667 0.00 0.00 0.00 4.00
2850 7081 1.457643 CCGTCCTCTGCCTCCCATA 60.458 63.158 0.00 0.00 0.00 2.74
2851 7082 1.467678 CCGTCCTCTGCCTCCCATAG 61.468 65.000 0.00 0.00 0.00 2.23
2852 7083 1.751563 GTCCTCTGCCTCCCATAGC 59.248 63.158 0.00 0.00 0.00 2.97
2853 7084 1.050988 GTCCTCTGCCTCCCATAGCA 61.051 60.000 0.00 0.00 37.46 3.49
2854 7085 0.326522 TCCTCTGCCTCCCATAGCAA 60.327 55.000 0.00 0.00 38.82 3.91
2855 7086 0.179034 CCTCTGCCTCCCATAGCAAC 60.179 60.000 0.00 0.00 38.82 4.17
2856 7087 0.179034 CTCTGCCTCCCATAGCAACC 60.179 60.000 0.00 0.00 38.82 3.77
2857 7088 1.152881 CTGCCTCCCATAGCAACCC 60.153 63.158 0.00 0.00 38.82 4.11
2858 7089 1.925285 CTGCCTCCCATAGCAACCCA 61.925 60.000 0.00 0.00 38.82 4.51
2859 7090 1.288508 TGCCTCCCATAGCAACCCAT 61.289 55.000 0.00 0.00 35.69 4.00
2860 7091 0.538287 GCCTCCCATAGCAACCCATC 60.538 60.000 0.00 0.00 0.00 3.51
2861 7092 0.250467 CCTCCCATAGCAACCCATCG 60.250 60.000 0.00 0.00 0.00 3.84
2862 7093 0.250467 CTCCCATAGCAACCCATCGG 60.250 60.000 0.00 0.00 0.00 4.18
2863 7094 1.898574 CCCATAGCAACCCATCGGC 60.899 63.158 0.00 0.00 0.00 5.54
2864 7095 2.253758 CCATAGCAACCCATCGGCG 61.254 63.158 0.00 0.00 0.00 6.46
2865 7096 2.591715 ATAGCAACCCATCGGCGC 60.592 61.111 0.00 0.00 0.00 6.53
2866 7097 3.106986 ATAGCAACCCATCGGCGCT 62.107 57.895 7.64 0.00 42.41 5.92
2867 7098 2.996168 ATAGCAACCCATCGGCGCTC 62.996 60.000 7.64 0.00 40.69 5.03
2869 7100 3.499737 CAACCCATCGGCGCTCAC 61.500 66.667 7.64 0.00 0.00 3.51
2870 7101 4.778143 AACCCATCGGCGCTCACC 62.778 66.667 7.64 0.00 0.00 4.02
2874 7105 4.827087 CATCGGCGCTCACCTGCT 62.827 66.667 7.64 0.00 0.00 4.24
2875 7106 4.087892 ATCGGCGCTCACCTGCTT 62.088 61.111 7.64 0.00 0.00 3.91
2876 7107 4.742201 TCGGCGCTCACCTGCTTC 62.742 66.667 7.64 0.00 0.00 3.86
2880 7111 2.740055 CGCTCACCTGCTTCGCTT 60.740 61.111 0.00 0.00 0.00 4.68
2881 7112 2.866028 GCTCACCTGCTTCGCTTG 59.134 61.111 0.00 0.00 0.00 4.01
2882 7113 2.866028 CTCACCTGCTTCGCTTGC 59.134 61.111 0.00 0.00 0.00 4.01
2883 7114 2.669569 TCACCTGCTTCGCTTGCC 60.670 61.111 0.00 0.00 0.00 4.52
2884 7115 2.979676 CACCTGCTTCGCTTGCCA 60.980 61.111 0.00 0.00 0.00 4.92
2885 7116 2.980233 ACCTGCTTCGCTTGCCAC 60.980 61.111 0.00 0.00 0.00 5.01
2886 7117 2.979676 CCTGCTTCGCTTGCCACA 60.980 61.111 0.00 0.00 0.00 4.17
2887 7118 2.559840 CTGCTTCGCTTGCCACAG 59.440 61.111 0.00 0.00 0.00 3.66
2888 7119 2.974489 CTGCTTCGCTTGCCACAGG 61.974 63.158 0.00 0.00 0.00 4.00
2906 7137 3.322466 CCGGGGCACTTCCAGTCT 61.322 66.667 0.00 0.00 36.21 3.24
2907 7138 2.266055 CGGGGCACTTCCAGTCTC 59.734 66.667 0.00 0.00 36.21 3.36
2908 7139 2.266055 GGGGCACTTCCAGTCTCG 59.734 66.667 0.00 0.00 36.21 4.04
2909 7140 2.435059 GGGCACTTCCAGTCTCGC 60.435 66.667 0.00 0.00 36.21 5.03
2910 7141 2.659610 GGCACTTCCAGTCTCGCT 59.340 61.111 0.00 0.00 34.01 4.93
2911 7142 1.739562 GGCACTTCCAGTCTCGCTG 60.740 63.158 0.00 0.00 44.63 5.18
2912 7143 2.386660 GCACTTCCAGTCTCGCTGC 61.387 63.158 0.00 0.00 43.71 5.25
2913 7144 1.005748 CACTTCCAGTCTCGCTGCA 60.006 57.895 0.00 0.00 43.71 4.41
2914 7145 1.005630 ACTTCCAGTCTCGCTGCAC 60.006 57.895 0.00 0.00 43.71 4.57
2915 7146 1.739562 CTTCCAGTCTCGCTGCACC 60.740 63.158 0.00 0.00 43.71 5.01
2916 7147 2.440385 CTTCCAGTCTCGCTGCACCA 62.440 60.000 0.00 0.00 43.71 4.17
2917 7148 2.031012 CCAGTCTCGCTGCACCAA 59.969 61.111 0.00 0.00 43.71 3.67
2918 7149 1.376424 CCAGTCTCGCTGCACCAAT 60.376 57.895 0.00 0.00 43.71 3.16
2919 7150 1.364626 CCAGTCTCGCTGCACCAATC 61.365 60.000 0.00 0.00 43.71 2.67
2920 7151 1.078848 AGTCTCGCTGCACCAATCC 60.079 57.895 0.00 0.00 0.00 3.01
2921 7152 2.109126 GTCTCGCTGCACCAATCCC 61.109 63.158 0.00 0.00 0.00 3.85
2922 7153 2.825836 CTCGCTGCACCAATCCCC 60.826 66.667 0.00 0.00 0.00 4.81
2923 7154 4.424711 TCGCTGCACCAATCCCCC 62.425 66.667 0.00 0.00 0.00 5.40
2924 7155 4.431131 CGCTGCACCAATCCCCCT 62.431 66.667 0.00 0.00 0.00 4.79
2925 7156 2.037847 GCTGCACCAATCCCCCTT 59.962 61.111 0.00 0.00 0.00 3.95
2926 7157 1.610379 GCTGCACCAATCCCCCTTT 60.610 57.895 0.00 0.00 0.00 3.11
2927 7158 1.607801 GCTGCACCAATCCCCCTTTC 61.608 60.000 0.00 0.00 0.00 2.62
2928 7159 0.040204 CTGCACCAATCCCCCTTTCT 59.960 55.000 0.00 0.00 0.00 2.52
2929 7160 0.251742 TGCACCAATCCCCCTTTCTG 60.252 55.000 0.00 0.00 0.00 3.02
2930 7161 1.607801 GCACCAATCCCCCTTTCTGC 61.608 60.000 0.00 0.00 0.00 4.26
2931 7162 0.040204 CACCAATCCCCCTTTCTGCT 59.960 55.000 0.00 0.00 0.00 4.24
2932 7163 0.786435 ACCAATCCCCCTTTCTGCTT 59.214 50.000 0.00 0.00 0.00 3.91
2933 7164 1.188863 CCAATCCCCCTTTCTGCTTG 58.811 55.000 0.00 0.00 0.00 4.01
2934 7165 1.272648 CCAATCCCCCTTTCTGCTTGA 60.273 52.381 0.00 0.00 0.00 3.02
2935 7166 2.625087 CCAATCCCCCTTTCTGCTTGAT 60.625 50.000 0.00 0.00 0.00 2.57
2936 7167 3.102204 CAATCCCCCTTTCTGCTTGATT 58.898 45.455 0.00 0.00 0.00 2.57
2937 7168 2.999185 TCCCCCTTTCTGCTTGATTT 57.001 45.000 0.00 0.00 0.00 2.17
2938 7169 2.528564 TCCCCCTTTCTGCTTGATTTG 58.471 47.619 0.00 0.00 0.00 2.32
2939 7170 2.158325 TCCCCCTTTCTGCTTGATTTGT 60.158 45.455 0.00 0.00 0.00 2.83
2940 7171 2.232208 CCCCCTTTCTGCTTGATTTGTC 59.768 50.000 0.00 0.00 0.00 3.18
2941 7172 2.095059 CCCCTTTCTGCTTGATTTGTCG 60.095 50.000 0.00 0.00 0.00 4.35
2942 7173 2.589014 CCTTTCTGCTTGATTTGTCGC 58.411 47.619 0.00 0.00 0.00 5.19
2943 7174 2.227388 CCTTTCTGCTTGATTTGTCGCT 59.773 45.455 0.00 0.00 0.00 4.93
2944 7175 3.486584 CTTTCTGCTTGATTTGTCGCTC 58.513 45.455 0.00 0.00 0.00 5.03
2945 7176 2.462456 TCTGCTTGATTTGTCGCTCT 57.538 45.000 0.00 0.00 0.00 4.09
2946 7177 2.071540 TCTGCTTGATTTGTCGCTCTG 58.928 47.619 0.00 0.00 0.00 3.35
2947 7178 2.071540 CTGCTTGATTTGTCGCTCTGA 58.928 47.619 0.00 0.00 0.00 3.27
2948 7179 2.676839 CTGCTTGATTTGTCGCTCTGAT 59.323 45.455 0.00 0.00 0.00 2.90
2949 7180 2.417586 TGCTTGATTTGTCGCTCTGATG 59.582 45.455 0.00 0.00 0.00 3.07
2950 7181 2.223203 GCTTGATTTGTCGCTCTGATGG 60.223 50.000 0.00 0.00 0.00 3.51
2951 7182 2.768253 TGATTTGTCGCTCTGATGGT 57.232 45.000 0.00 0.00 0.00 3.55
2952 7183 2.621338 TGATTTGTCGCTCTGATGGTC 58.379 47.619 0.00 0.00 0.00 4.02
2953 7184 2.028203 TGATTTGTCGCTCTGATGGTCA 60.028 45.455 0.00 0.00 0.00 4.02
2954 7185 1.795768 TTTGTCGCTCTGATGGTCAC 58.204 50.000 0.00 0.00 0.00 3.67
2955 7186 0.037326 TTGTCGCTCTGATGGTCACC 60.037 55.000 0.00 0.00 0.00 4.02
2956 7187 0.900182 TGTCGCTCTGATGGTCACCT 60.900 55.000 0.00 0.00 0.00 4.00
2957 7188 0.179124 GTCGCTCTGATGGTCACCTC 60.179 60.000 0.00 0.00 0.00 3.85
2958 7189 0.611896 TCGCTCTGATGGTCACCTCA 60.612 55.000 0.00 0.00 0.00 3.86
2959 7190 0.459237 CGCTCTGATGGTCACCTCAC 60.459 60.000 0.00 0.00 0.00 3.51
2960 7191 0.459237 GCTCTGATGGTCACCTCACG 60.459 60.000 0.00 0.00 0.00 4.35
2961 7192 1.177401 CTCTGATGGTCACCTCACGA 58.823 55.000 0.00 0.00 0.00 4.35
2962 7193 1.753649 CTCTGATGGTCACCTCACGAT 59.246 52.381 0.00 0.00 0.00 3.73
2963 7194 1.751351 TCTGATGGTCACCTCACGATC 59.249 52.381 0.00 0.00 33.35 3.69
2964 7195 1.478105 CTGATGGTCACCTCACGATCA 59.522 52.381 0.00 0.00 38.69 2.92
2965 7196 1.899142 TGATGGTCACCTCACGATCAA 59.101 47.619 0.00 0.00 38.23 2.57
2966 7197 2.271800 GATGGTCACCTCACGATCAAC 58.728 52.381 0.00 0.00 33.07 3.18
2967 7198 1.338107 TGGTCACCTCACGATCAACT 58.662 50.000 0.00 0.00 0.00 3.16
2968 7199 1.000843 TGGTCACCTCACGATCAACTG 59.999 52.381 0.00 0.00 0.00 3.16
2969 7200 1.071605 GTCACCTCACGATCAACTGC 58.928 55.000 0.00 0.00 0.00 4.40
2970 7201 0.678950 TCACCTCACGATCAACTGCA 59.321 50.000 0.00 0.00 0.00 4.41
2971 7202 1.276138 TCACCTCACGATCAACTGCAT 59.724 47.619 0.00 0.00 0.00 3.96
2972 7203 1.395954 CACCTCACGATCAACTGCATG 59.604 52.381 0.00 0.00 0.00 4.06
2973 7204 1.012086 CCTCACGATCAACTGCATGG 58.988 55.000 0.00 0.00 0.00 3.66
2974 7205 0.376152 CTCACGATCAACTGCATGGC 59.624 55.000 0.00 0.00 0.00 4.40
2975 7206 0.036105 TCACGATCAACTGCATGGCT 60.036 50.000 0.00 0.00 0.00 4.75
2976 7207 1.206849 TCACGATCAACTGCATGGCTA 59.793 47.619 0.00 0.00 0.00 3.93
2977 7208 1.596260 CACGATCAACTGCATGGCTAG 59.404 52.381 0.00 0.00 0.00 3.42
2978 7209 1.224075 CGATCAACTGCATGGCTAGG 58.776 55.000 0.00 0.00 0.00 3.02
2979 7210 0.950116 GATCAACTGCATGGCTAGGC 59.050 55.000 9.85 9.85 0.00 3.93
2980 7211 0.256752 ATCAACTGCATGGCTAGGCA 59.743 50.000 22.54 22.54 41.97 4.75
2985 7216 2.872408 TGCATGGCTAGGCAGAAAC 58.128 52.632 24.38 13.29 38.91 2.78
2986 7217 0.680921 TGCATGGCTAGGCAGAAACC 60.681 55.000 24.38 10.56 38.91 3.27
2987 7218 0.394899 GCATGGCTAGGCAGAAACCT 60.395 55.000 24.38 3.40 44.31 3.50
2988 7219 1.673168 CATGGCTAGGCAGAAACCTC 58.327 55.000 24.38 0.00 41.50 3.85
2989 7220 0.548510 ATGGCTAGGCAGAAACCTCC 59.451 55.000 24.38 0.00 41.50 4.30
2990 7221 1.224870 GGCTAGGCAGAAACCTCCC 59.775 63.158 12.16 0.00 41.50 4.30
2991 7222 1.153349 GCTAGGCAGAAACCTCCCG 60.153 63.158 0.00 0.00 41.50 5.14
2992 7223 1.153349 CTAGGCAGAAACCTCCCGC 60.153 63.158 0.00 0.00 41.50 6.13
2993 7224 2.907897 CTAGGCAGAAACCTCCCGCG 62.908 65.000 0.00 0.00 41.50 6.46
2995 7226 4.699522 GCAGAAACCTCCCGCGGT 62.700 66.667 26.12 3.22 39.48 5.68
2996 7227 2.434359 CAGAAACCTCCCGCGGTC 60.434 66.667 26.12 14.01 35.89 4.79
2997 7228 3.703127 AGAAACCTCCCGCGGTCC 61.703 66.667 26.12 4.51 35.89 4.46
2998 7229 3.703127 GAAACCTCCCGCGGTCCT 61.703 66.667 26.12 1.29 35.89 3.85
2999 7230 3.660732 GAAACCTCCCGCGGTCCTC 62.661 68.421 26.12 7.74 35.89 3.71
3005 7236 4.452733 CCCGCGGTCCTCCAGTTC 62.453 72.222 26.12 0.00 0.00 3.01
3006 7237 4.796231 CCGCGGTCCTCCAGTTCG 62.796 72.222 19.50 0.00 0.00 3.95
3007 7238 4.796231 CGCGGTCCTCCAGTTCGG 62.796 72.222 0.00 0.00 0.00 4.30
3009 7240 3.382832 CGGTCCTCCAGTTCGGCT 61.383 66.667 0.00 0.00 33.14 5.52
3010 7241 2.579738 GGTCCTCCAGTTCGGCTC 59.420 66.667 0.00 0.00 33.14 4.70
3011 7242 2.182030 GTCCTCCAGTTCGGCTCG 59.818 66.667 0.00 0.00 33.14 5.03
3012 7243 3.068691 TCCTCCAGTTCGGCTCGG 61.069 66.667 0.00 0.00 33.14 4.63
3013 7244 4.148825 CCTCCAGTTCGGCTCGGG 62.149 72.222 0.00 0.00 33.14 5.14
3014 7245 4.821589 CTCCAGTTCGGCTCGGGC 62.822 72.222 0.00 0.00 37.82 6.13
3025 7256 4.101448 CTCGGGCCTCCCTGGTTG 62.101 72.222 0.84 0.00 42.67 3.77
3031 7262 4.351054 CCTCCCTGGTTGCGCCTT 62.351 66.667 4.18 0.00 38.35 4.35
3032 7263 2.747855 CTCCCTGGTTGCGCCTTC 60.748 66.667 4.18 0.00 38.35 3.46
3033 7264 3.249189 TCCCTGGTTGCGCCTTCT 61.249 61.111 4.18 0.00 38.35 2.85
3034 7265 2.282462 CCCTGGTTGCGCCTTCTT 60.282 61.111 4.18 0.00 38.35 2.52
3035 7266 2.335712 CCCTGGTTGCGCCTTCTTC 61.336 63.158 4.18 0.00 38.35 2.87
3036 7267 2.680913 CCTGGTTGCGCCTTCTTCG 61.681 63.158 4.18 0.00 38.35 3.79
3042 7273 3.854459 GCGCCTTCTTCGCCTTCG 61.854 66.667 0.00 0.00 46.18 3.79
3043 7274 2.126071 CGCCTTCTTCGCCTTCGA 60.126 61.111 0.00 0.00 43.89 3.71
3044 7275 1.519455 CGCCTTCTTCGCCTTCGAT 60.519 57.895 0.00 0.00 45.04 3.59
3045 7276 1.756375 CGCCTTCTTCGCCTTCGATG 61.756 60.000 0.00 0.00 45.04 3.84
3046 7277 1.432270 GCCTTCTTCGCCTTCGATGG 61.432 60.000 12.90 12.90 45.04 3.51
3047 7278 0.108138 CCTTCTTCGCCTTCGATGGT 60.108 55.000 17.82 0.00 45.04 3.55
3048 7279 1.002366 CTTCTTCGCCTTCGATGGTG 58.998 55.000 21.62 21.62 45.04 4.17
3049 7280 0.606096 TTCTTCGCCTTCGATGGTGA 59.394 50.000 25.09 25.09 45.04 4.02
3050 7281 0.108804 TCTTCGCCTTCGATGGTGAC 60.109 55.000 27.74 8.00 45.13 3.67
3051 7282 1.079405 TTCGCCTTCGATGGTGACC 60.079 57.895 27.74 7.67 45.13 4.02
3052 7283 1.541310 TTCGCCTTCGATGGTGACCT 61.541 55.000 27.74 0.00 45.13 3.85
3053 7284 1.079127 CGCCTTCGATGGTGACCTT 60.079 57.895 22.84 0.00 39.82 3.50
3054 7285 1.084370 CGCCTTCGATGGTGACCTTC 61.084 60.000 22.84 5.17 39.82 3.46
3055 7286 0.744771 GCCTTCGATGGTGACCTTCC 60.745 60.000 17.82 0.00 0.00 3.46
3056 7287 0.905357 CCTTCGATGGTGACCTTCCT 59.095 55.000 11.41 0.00 0.00 3.36
3057 7288 1.406069 CCTTCGATGGTGACCTTCCTG 60.406 57.143 11.41 0.00 0.00 3.86
3058 7289 1.276421 CTTCGATGGTGACCTTCCTGT 59.724 52.381 11.41 0.00 0.00 4.00
3059 7290 1.348064 TCGATGGTGACCTTCCTGTT 58.652 50.000 11.41 0.00 0.00 3.16
3060 7291 1.275291 TCGATGGTGACCTTCCTGTTC 59.725 52.381 11.41 0.00 0.00 3.18
3061 7292 1.726853 GATGGTGACCTTCCTGTTCG 58.273 55.000 2.11 0.00 0.00 3.95
3062 7293 0.324943 ATGGTGACCTTCCTGTTCGG 59.675 55.000 2.11 0.00 0.00 4.30
3063 7294 1.003718 GGTGACCTTCCTGTTCGGG 60.004 63.158 0.00 0.00 0.00 5.14
3064 7295 1.477685 GGTGACCTTCCTGTTCGGGA 61.478 60.000 0.00 0.00 0.00 5.14
3065 7296 0.037232 GTGACCTTCCTGTTCGGGAG 60.037 60.000 0.51 0.00 38.24 4.30
3069 7300 1.296715 CTTCCTGTTCGGGAGGTGG 59.703 63.158 0.51 0.00 34.38 4.61
3070 7301 2.804828 CTTCCTGTTCGGGAGGTGGC 62.805 65.000 0.51 0.00 34.38 5.01
3071 7302 3.636231 CCTGTTCGGGAGGTGGCA 61.636 66.667 0.00 0.00 0.00 4.92
3072 7303 2.358737 CTGTTCGGGAGGTGGCAC 60.359 66.667 9.70 9.70 0.00 5.01
3073 7304 3.901797 CTGTTCGGGAGGTGGCACC 62.902 68.421 29.32 29.32 38.99 5.01
3083 7314 4.996434 GTGGCACCTGCGCTGTCT 62.996 66.667 9.73 0.00 43.26 3.41
3084 7315 3.310307 TGGCACCTGCGCTGTCTA 61.310 61.111 9.73 0.00 43.26 2.59
3085 7316 2.047274 GGCACCTGCGCTGTCTAA 60.047 61.111 9.73 0.00 43.26 2.10
3086 7317 1.450312 GGCACCTGCGCTGTCTAAT 60.450 57.895 9.73 0.00 43.26 1.73
3087 7318 1.709147 GGCACCTGCGCTGTCTAATG 61.709 60.000 9.73 2.39 43.26 1.90
3088 7319 1.717937 CACCTGCGCTGTCTAATGC 59.282 57.895 9.73 0.00 0.00 3.56
3094 7325 4.033894 GCTGTCTAATGCGGCGAT 57.966 55.556 12.98 0.00 0.00 4.58
3095 7326 2.311294 GCTGTCTAATGCGGCGATT 58.689 52.632 12.98 10.37 0.00 3.34
3096 7327 0.041839 GCTGTCTAATGCGGCGATTG 60.042 55.000 12.98 0.00 0.00 2.67
3097 7328 1.290203 CTGTCTAATGCGGCGATTGT 58.710 50.000 12.98 0.00 0.00 2.71
3098 7329 1.665679 CTGTCTAATGCGGCGATTGTT 59.334 47.619 12.98 1.05 0.00 2.83
3099 7330 2.080693 TGTCTAATGCGGCGATTGTTT 58.919 42.857 12.98 0.00 0.00 2.83
3100 7331 2.095213 TGTCTAATGCGGCGATTGTTTC 59.905 45.455 12.98 0.00 0.00 2.78
3123 7354 4.071875 GTCAAAGACCAGAAGATTTCGC 57.928 45.455 0.00 0.00 34.02 4.70
3124 7355 3.074412 TCAAAGACCAGAAGATTTCGCC 58.926 45.455 0.00 0.00 34.02 5.54
3125 7356 2.115343 AAGACCAGAAGATTTCGCCC 57.885 50.000 0.00 0.00 34.02 6.13
3126 7357 0.253327 AGACCAGAAGATTTCGCCCC 59.747 55.000 0.00 0.00 34.02 5.80
3127 7358 0.035439 GACCAGAAGATTTCGCCCCA 60.035 55.000 0.00 0.00 34.02 4.96
3128 7359 0.404040 ACCAGAAGATTTCGCCCCAA 59.596 50.000 0.00 0.00 34.02 4.12
3129 7360 1.203001 ACCAGAAGATTTCGCCCCAAA 60.203 47.619 0.00 0.00 34.02 3.28
3130 7361 1.202348 CCAGAAGATTTCGCCCCAAAC 59.798 52.381 0.00 0.00 34.02 2.93
3131 7362 2.162681 CAGAAGATTTCGCCCCAAACT 58.837 47.619 0.00 0.00 34.02 2.66
3132 7363 2.162408 CAGAAGATTTCGCCCCAAACTC 59.838 50.000 0.00 0.00 34.02 3.01
3133 7364 2.040412 AGAAGATTTCGCCCCAAACTCT 59.960 45.455 0.00 0.00 34.02 3.24
3134 7365 2.586648 AGATTTCGCCCCAAACTCTT 57.413 45.000 0.00 0.00 0.00 2.85
3135 7366 2.437413 AGATTTCGCCCCAAACTCTTC 58.563 47.619 0.00 0.00 0.00 2.87
3136 7367 2.040412 AGATTTCGCCCCAAACTCTTCT 59.960 45.455 0.00 0.00 0.00 2.85
3137 7368 1.604604 TTTCGCCCCAAACTCTTCTG 58.395 50.000 0.00 0.00 0.00 3.02
3138 7369 0.250727 TTCGCCCCAAACTCTTCTGG 60.251 55.000 0.00 0.00 0.00 3.86
3139 7370 1.125093 TCGCCCCAAACTCTTCTGGA 61.125 55.000 0.00 0.00 34.35 3.86
3140 7371 0.250727 CGCCCCAAACTCTTCTGGAA 60.251 55.000 0.00 0.00 34.35 3.53
3141 7372 1.539157 GCCCCAAACTCTTCTGGAAG 58.461 55.000 4.13 4.13 39.71 3.46
3142 7373 1.888391 GCCCCAAACTCTTCTGGAAGG 60.888 57.143 10.01 4.46 38.88 3.46
3143 7374 1.272147 CCCCAAACTCTTCTGGAAGGG 60.272 57.143 8.50 8.50 44.36 3.95
3144 7375 1.539157 CCAAACTCTTCTGGAAGGGC 58.461 55.000 9.84 0.00 42.60 5.19
3145 7376 1.074566 CCAAACTCTTCTGGAAGGGCT 59.925 52.381 9.84 0.00 42.60 5.19
3146 7377 2.489802 CCAAACTCTTCTGGAAGGGCTT 60.490 50.000 9.84 1.97 42.60 4.35
3147 7378 2.816672 CAAACTCTTCTGGAAGGGCTTC 59.183 50.000 9.84 0.00 42.60 3.86
3148 7379 0.610687 ACTCTTCTGGAAGGGCTTCG 59.389 55.000 9.84 0.00 42.60 3.79
3149 7380 0.742635 CTCTTCTGGAAGGGCTTCGC 60.743 60.000 10.01 0.00 40.37 4.70
3150 7381 1.003355 CTTCTGGAAGGGCTTCGCA 60.003 57.895 2.66 0.00 40.37 5.10
3151 7382 0.393537 CTTCTGGAAGGGCTTCGCAT 60.394 55.000 2.66 0.00 40.37 4.73
3152 7383 0.038166 TTCTGGAAGGGCTTCGCATT 59.962 50.000 0.00 0.00 40.37 3.56
3153 7384 0.038166 TCTGGAAGGGCTTCGCATTT 59.962 50.000 0.00 0.00 40.37 2.32
3154 7385 0.171903 CTGGAAGGGCTTCGCATTTG 59.828 55.000 0.00 0.00 40.37 2.32
3155 7386 1.250154 TGGAAGGGCTTCGCATTTGG 61.250 55.000 0.00 0.00 40.37 3.28
3156 7387 1.512694 GAAGGGCTTCGCATTTGGG 59.487 57.895 0.00 0.00 0.00 4.12
3157 7388 0.965363 GAAGGGCTTCGCATTTGGGA 60.965 55.000 0.00 0.00 35.07 4.37
3158 7389 0.324645 AAGGGCTTCGCATTTGGGAT 60.325 50.000 0.00 0.00 36.86 3.85
3159 7390 1.039233 AGGGCTTCGCATTTGGGATG 61.039 55.000 0.00 2.62 36.86 3.51
3160 7391 1.037030 GGGCTTCGCATTTGGGATGA 61.037 55.000 12.70 0.00 36.86 2.92
3161 7392 0.383231 GGCTTCGCATTTGGGATGAG 59.617 55.000 12.70 4.03 36.86 2.90
3162 7393 0.383231 GCTTCGCATTTGGGATGAGG 59.617 55.000 12.70 0.97 36.86 3.86
3163 7394 0.383231 CTTCGCATTTGGGATGAGGC 59.617 55.000 5.00 0.00 36.86 4.70
3164 7395 0.034186 TTCGCATTTGGGATGAGGCT 60.034 50.000 0.00 0.00 36.86 4.58
3165 7396 0.749091 TCGCATTTGGGATGAGGCTG 60.749 55.000 0.00 0.00 31.73 4.85
3166 7397 1.731433 CGCATTTGGGATGAGGCTGG 61.731 60.000 0.00 0.00 0.00 4.85
3167 7398 0.396139 GCATTTGGGATGAGGCTGGA 60.396 55.000 0.00 0.00 0.00 3.86
3168 7399 1.756690 GCATTTGGGATGAGGCTGGAT 60.757 52.381 0.00 0.00 0.00 3.41
3169 7400 1.961394 CATTTGGGATGAGGCTGGATG 59.039 52.381 0.00 0.00 0.00 3.51
3170 7401 0.259647 TTTGGGATGAGGCTGGATGG 59.740 55.000 0.00 0.00 0.00 3.51
3171 7402 1.648302 TTGGGATGAGGCTGGATGGG 61.648 60.000 0.00 0.00 0.00 4.00
3172 7403 1.771746 GGGATGAGGCTGGATGGGA 60.772 63.158 0.00 0.00 0.00 4.37
3173 7404 1.453669 GGATGAGGCTGGATGGGAC 59.546 63.158 0.00 0.00 0.00 4.46
3174 7405 1.059006 GGATGAGGCTGGATGGGACT 61.059 60.000 0.00 0.00 0.00 3.85
3175 7406 0.108207 GATGAGGCTGGATGGGACTG 59.892 60.000 0.00 0.00 0.00 3.51
3176 7407 1.351080 ATGAGGCTGGATGGGACTGG 61.351 60.000 0.00 0.00 0.00 4.00
3177 7408 3.412624 GAGGCTGGATGGGACTGGC 62.413 68.421 0.00 0.00 0.00 4.85
3178 7409 3.731728 GGCTGGATGGGACTGGCA 61.732 66.667 0.00 0.00 33.54 4.92
3179 7410 2.356278 GCTGGATGGGACTGGCAA 59.644 61.111 0.00 0.00 0.00 4.52
3180 7411 1.751927 GCTGGATGGGACTGGCAAG 60.752 63.158 0.00 0.00 0.00 4.01
3181 7412 1.687612 CTGGATGGGACTGGCAAGT 59.312 57.895 0.00 0.00 40.21 3.16
3182 7413 0.038744 CTGGATGGGACTGGCAAGTT 59.961 55.000 0.00 0.00 36.52 2.66
3183 7414 0.251297 TGGATGGGACTGGCAAGTTG 60.251 55.000 0.00 0.00 36.52 3.16
3184 7415 0.251341 GGATGGGACTGGCAAGTTGT 60.251 55.000 4.48 0.00 36.52 3.32
3185 7416 1.620822 GATGGGACTGGCAAGTTGTT 58.379 50.000 4.48 0.00 36.52 2.83
3186 7417 1.541588 GATGGGACTGGCAAGTTGTTC 59.458 52.381 4.48 0.00 36.52 3.18
3187 7418 0.257328 TGGGACTGGCAAGTTGTTCA 59.743 50.000 4.48 3.08 36.52 3.18
3188 7419 0.954452 GGGACTGGCAAGTTGTTCAG 59.046 55.000 19.64 19.64 36.52 3.02
3189 7420 1.476833 GGGACTGGCAAGTTGTTCAGA 60.477 52.381 24.76 0.23 36.52 3.27
3190 7421 2.508526 GGACTGGCAAGTTGTTCAGAT 58.491 47.619 24.76 14.39 36.52 2.90
3191 7422 2.227388 GGACTGGCAAGTTGTTCAGATG 59.773 50.000 24.76 8.85 36.52 2.90
3192 7423 2.880890 GACTGGCAAGTTGTTCAGATGT 59.119 45.455 24.76 11.15 36.52 3.06
3193 7424 2.880890 ACTGGCAAGTTGTTCAGATGTC 59.119 45.455 24.76 0.45 30.14 3.06
3194 7425 3.144506 CTGGCAAGTTGTTCAGATGTCT 58.855 45.455 17.66 0.00 0.00 3.41
3195 7426 2.880268 TGGCAAGTTGTTCAGATGTCTG 59.120 45.455 4.48 3.61 45.08 3.51
3196 7427 7.661230 ACTGGCAAGTTGTTCAGATGTCTGA 62.661 44.000 24.76 8.58 41.72 3.27
3197 7428 8.872888 ACTGGCAAGTTGTTCAGATGTCTGAT 62.873 42.308 24.76 0.00 42.44 2.90
3210 7441 6.484540 CAGATGTCTGATTTTGATTTCTCCG 58.515 40.000 3.96 0.00 46.59 4.63
3211 7442 6.093219 CAGATGTCTGATTTTGATTTCTCCGT 59.907 38.462 3.96 0.00 46.59 4.69
3212 7443 5.611796 TGTCTGATTTTGATTTCTCCGTG 57.388 39.130 0.00 0.00 0.00 4.94
3213 7444 4.455533 TGTCTGATTTTGATTTCTCCGTGG 59.544 41.667 0.00 0.00 0.00 4.94
3214 7445 4.455877 GTCTGATTTTGATTTCTCCGTGGT 59.544 41.667 0.00 0.00 0.00 4.16
3215 7446 4.455533 TCTGATTTTGATTTCTCCGTGGTG 59.544 41.667 0.00 0.00 0.00 4.17
3216 7447 4.141287 TGATTTTGATTTCTCCGTGGTGT 58.859 39.130 0.00 0.00 0.00 4.16
3217 7448 4.582656 TGATTTTGATTTCTCCGTGGTGTT 59.417 37.500 0.00 0.00 0.00 3.32
3218 7449 4.993029 TTTTGATTTCTCCGTGGTGTTT 57.007 36.364 0.00 0.00 0.00 2.83
3219 7450 4.561735 TTTGATTTCTCCGTGGTGTTTC 57.438 40.909 0.00 0.00 0.00 2.78
3220 7451 2.500229 TGATTTCTCCGTGGTGTTTCC 58.500 47.619 0.00 0.00 0.00 3.13
3221 7452 1.810755 GATTTCTCCGTGGTGTTTCCC 59.189 52.381 0.00 0.00 34.77 3.97
3222 7453 0.841289 TTTCTCCGTGGTGTTTCCCT 59.159 50.000 0.00 0.00 34.77 4.20
3223 7454 0.395312 TTCTCCGTGGTGTTTCCCTC 59.605 55.000 0.00 0.00 34.77 4.30
3224 7455 1.003718 CTCCGTGGTGTTTCCCTCC 60.004 63.158 0.00 0.00 34.77 4.30
3225 7456 1.764571 CTCCGTGGTGTTTCCCTCCA 61.765 60.000 0.00 0.00 34.36 3.86
3226 7457 1.149627 CCGTGGTGTTTCCCTCCAA 59.850 57.895 0.00 0.00 38.40 3.53
3227 7458 0.466555 CCGTGGTGTTTCCCTCCAAA 60.467 55.000 0.00 0.00 38.40 3.28
3228 7459 0.951558 CGTGGTGTTTCCCTCCAAAG 59.048 55.000 0.00 0.00 38.40 2.77
3229 7460 1.476110 CGTGGTGTTTCCCTCCAAAGA 60.476 52.381 0.00 0.00 38.40 2.52
3230 7461 2.661718 GTGGTGTTTCCCTCCAAAGAA 58.338 47.619 0.00 0.00 38.40 2.52
3231 7462 3.230976 GTGGTGTTTCCCTCCAAAGAAT 58.769 45.455 0.00 0.00 38.40 2.40
3232 7463 3.005791 GTGGTGTTTCCCTCCAAAGAATG 59.994 47.826 0.00 0.00 38.40 2.67
3233 7464 3.230976 GGTGTTTCCCTCCAAAGAATGT 58.769 45.455 0.00 0.00 0.00 2.71
3234 7465 3.641436 GGTGTTTCCCTCCAAAGAATGTT 59.359 43.478 0.00 0.00 0.00 2.71
3235 7466 4.100963 GGTGTTTCCCTCCAAAGAATGTTT 59.899 41.667 0.00 0.00 0.00 2.83
3236 7467 5.049828 GTGTTTCCCTCCAAAGAATGTTTG 58.950 41.667 0.00 0.00 0.00 2.93
3237 7468 4.058124 GTTTCCCTCCAAAGAATGTTTGC 58.942 43.478 0.00 0.00 0.00 3.68
3238 7469 1.885887 TCCCTCCAAAGAATGTTTGCG 59.114 47.619 0.00 0.00 0.00 4.85
3239 7470 1.067635 CCCTCCAAAGAATGTTTGCGG 60.068 52.381 0.00 0.73 0.00 5.69
3240 7471 1.885887 CCTCCAAAGAATGTTTGCGGA 59.114 47.619 0.00 0.00 0.00 5.54
3241 7472 2.493278 CCTCCAAAGAATGTTTGCGGAT 59.507 45.455 0.00 0.00 0.00 4.18
3242 7473 3.504863 CTCCAAAGAATGTTTGCGGATG 58.495 45.455 0.00 0.00 0.00 3.51
3243 7474 3.153130 TCCAAAGAATGTTTGCGGATGA 58.847 40.909 0.00 0.00 0.00 2.92
3244 7475 3.763360 TCCAAAGAATGTTTGCGGATGAT 59.237 39.130 0.00 0.00 0.00 2.45
3245 7476 4.220382 TCCAAAGAATGTTTGCGGATGATT 59.780 37.500 0.00 0.00 0.00 2.57
3246 7477 4.327898 CCAAAGAATGTTTGCGGATGATTG 59.672 41.667 0.00 0.00 0.00 2.67
3247 7478 3.155093 AGAATGTTTGCGGATGATTGC 57.845 42.857 0.00 0.00 0.00 3.56
3248 7479 2.159198 AGAATGTTTGCGGATGATTGCC 60.159 45.455 0.00 0.00 0.00 4.52
3249 7480 1.477553 ATGTTTGCGGATGATTGCCT 58.522 45.000 0.00 0.00 0.00 4.75
3250 7481 0.810648 TGTTTGCGGATGATTGCCTC 59.189 50.000 0.00 0.00 0.00 4.70
3251 7482 0.810648 GTTTGCGGATGATTGCCTCA 59.189 50.000 0.00 0.00 38.53 3.86
3253 7484 1.026584 TTGCGGATGATTGCCTCATG 58.973 50.000 3.78 0.00 44.83 3.07
3254 7485 1.285023 GCGGATGATTGCCTCATGC 59.715 57.895 3.78 5.84 44.83 4.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.338020 GGCCCATTTCGCCTTTATGAG 59.662 52.381 0.00 0.00 43.48 2.90
1 2 1.398692 GGCCCATTTCGCCTTTATGA 58.601 50.000 0.00 0.00 43.48 2.15
2 3 0.389025 GGGCCCATTTCGCCTTTATG 59.611 55.000 19.95 0.00 46.24 1.90
3 4 0.032615 TGGGCCCATTTCGCCTTTAT 60.033 50.000 24.45 0.00 46.24 1.40
4 5 0.682855 CTGGGCCCATTTCGCCTTTA 60.683 55.000 28.82 0.00 46.24 1.85
5 6 1.984026 CTGGGCCCATTTCGCCTTT 60.984 57.895 28.82 0.00 46.24 3.11
6 7 2.362889 CTGGGCCCATTTCGCCTT 60.363 61.111 28.82 0.00 46.24 4.35
7 8 4.447342 CCTGGGCCCATTTCGCCT 62.447 66.667 28.82 0.00 46.24 5.52
19 20 2.051518 TTAAATGCGCAGGCCTGGG 61.052 57.895 38.26 38.26 45.07 4.45
20 21 1.139520 GTTAAATGCGCAGGCCTGG 59.860 57.895 33.46 23.40 38.85 4.45
21 22 1.226379 CGTTAAATGCGCAGGCCTG 60.226 57.895 29.34 29.34 38.85 4.85
22 23 1.241315 AACGTTAAATGCGCAGGCCT 61.241 50.000 18.32 0.00 38.85 5.19
23 24 0.796870 GAACGTTAAATGCGCAGGCC 60.797 55.000 18.32 0.00 38.85 5.19
24 25 0.796870 GGAACGTTAAATGCGCAGGC 60.797 55.000 18.32 2.76 40.52 4.85
25 26 0.519519 TGGAACGTTAAATGCGCAGG 59.480 50.000 18.32 0.00 0.00 4.85
26 27 2.176369 CATGGAACGTTAAATGCGCAG 58.824 47.619 18.32 2.85 0.00 5.18
27 28 1.730772 GCATGGAACGTTAAATGCGCA 60.731 47.619 23.86 14.96 36.41 6.09
28 29 0.913876 GCATGGAACGTTAAATGCGC 59.086 50.000 23.86 0.00 36.41 6.09
29 30 1.132262 AGGCATGGAACGTTAAATGCG 59.868 47.619 27.84 8.80 45.04 4.73
30 31 2.094752 ACAGGCATGGAACGTTAAATGC 60.095 45.455 27.46 27.46 43.71 3.56
31 32 3.848272 ACAGGCATGGAACGTTAAATG 57.152 42.857 15.14 15.14 0.00 2.32
32 33 4.079253 AGAACAGGCATGGAACGTTAAAT 58.921 39.130 0.00 0.00 0.00 1.40
33 34 3.482436 AGAACAGGCATGGAACGTTAAA 58.518 40.909 0.00 0.00 0.00 1.52
34 35 3.071479 GAGAACAGGCATGGAACGTTAA 58.929 45.455 0.00 0.00 0.00 2.01
35 36 2.695359 GAGAACAGGCATGGAACGTTA 58.305 47.619 0.00 0.00 0.00 3.18
36 37 1.523758 GAGAACAGGCATGGAACGTT 58.476 50.000 0.00 0.00 0.00 3.99
37 38 0.670546 CGAGAACAGGCATGGAACGT 60.671 55.000 2.31 0.00 0.00 3.99
38 39 0.389817 TCGAGAACAGGCATGGAACG 60.390 55.000 2.31 3.32 0.00 3.95
39 40 1.734465 CTTCGAGAACAGGCATGGAAC 59.266 52.381 2.31 0.00 0.00 3.62
40 41 1.339055 CCTTCGAGAACAGGCATGGAA 60.339 52.381 2.31 0.00 0.00 3.53
41 42 0.250234 CCTTCGAGAACAGGCATGGA 59.750 55.000 2.31 0.00 0.00 3.41
42 43 2.772739 CCTTCGAGAACAGGCATGG 58.227 57.895 2.31 0.00 0.00 3.66
47 48 1.301677 GCCTTGCCTTCGAGAACAGG 61.302 60.000 0.00 0.00 0.00 4.00
48 49 1.301677 GGCCTTGCCTTCGAGAACAG 61.302 60.000 0.00 0.00 46.69 3.16
49 50 1.302511 GGCCTTGCCTTCGAGAACA 60.303 57.895 0.00 0.00 46.69 3.18
50 51 3.579685 GGCCTTGCCTTCGAGAAC 58.420 61.111 0.00 0.00 46.69 3.01
68 69 4.450122 GTGTCGTGCCAGCATGCG 62.450 66.667 13.01 7.31 33.28 4.73
69 70 4.450122 CGTGTCGTGCCAGCATGC 62.450 66.667 10.51 10.51 33.28 4.06
70 71 3.015293 GACGTGTCGTGCCAGCATG 62.015 63.158 5.46 5.46 41.37 4.06
71 72 2.738521 GACGTGTCGTGCCAGCAT 60.739 61.111 0.00 0.00 41.37 3.79
72 73 4.214327 TGACGTGTCGTGCCAGCA 62.214 61.111 0.00 0.00 41.37 4.41
73 74 3.702555 GTGACGTGTCGTGCCAGC 61.703 66.667 0.00 0.00 41.37 4.85
74 75 2.279186 TGTGACGTGTCGTGCCAG 60.279 61.111 0.00 0.00 41.37 4.85
75 76 2.566057 AAGTGTGACGTGTCGTGCCA 62.566 55.000 0.00 0.00 41.37 4.92
76 77 0.595567 TAAGTGTGACGTGTCGTGCC 60.596 55.000 0.00 0.00 41.37 5.01
77 78 1.415374 ATAAGTGTGACGTGTCGTGC 58.585 50.000 0.00 0.00 41.37 5.34
78 79 4.441744 TGTTTATAAGTGTGACGTGTCGTG 59.558 41.667 0.00 0.00 41.37 4.35
79 80 4.609947 TGTTTATAAGTGTGACGTGTCGT 58.390 39.130 0.00 0.00 45.10 4.34
80 81 4.089493 CCTGTTTATAAGTGTGACGTGTCG 59.911 45.833 0.00 0.00 0.00 4.35
81 82 4.143179 GCCTGTTTATAAGTGTGACGTGTC 60.143 45.833 0.00 0.00 0.00 3.67
82 83 3.744426 GCCTGTTTATAAGTGTGACGTGT 59.256 43.478 0.00 0.00 0.00 4.49
83 84 3.124636 GGCCTGTTTATAAGTGTGACGTG 59.875 47.826 0.00 0.00 0.00 4.49
84 85 3.007614 AGGCCTGTTTATAAGTGTGACGT 59.992 43.478 3.11 0.00 0.00 4.34
85 86 3.596214 AGGCCTGTTTATAAGTGTGACG 58.404 45.455 3.11 0.00 0.00 4.35
86 87 3.939592 GGAGGCCTGTTTATAAGTGTGAC 59.060 47.826 12.00 0.00 0.00 3.67
87 88 3.585289 TGGAGGCCTGTTTATAAGTGTGA 59.415 43.478 12.00 0.00 0.00 3.58
88 89 3.950397 TGGAGGCCTGTTTATAAGTGTG 58.050 45.455 12.00 0.00 0.00 3.82
89 90 4.018415 ACATGGAGGCCTGTTTATAAGTGT 60.018 41.667 12.00 0.00 0.00 3.55
90 91 4.336433 CACATGGAGGCCTGTTTATAAGTG 59.664 45.833 12.00 4.13 0.00 3.16
91 92 4.526970 CACATGGAGGCCTGTTTATAAGT 58.473 43.478 12.00 0.00 0.00 2.24
92 93 3.316308 GCACATGGAGGCCTGTTTATAAG 59.684 47.826 12.00 0.00 0.00 1.73
121 122 3.040965 CCATAAATGGGCCTCGCAT 57.959 52.632 4.53 0.00 44.31 4.73
207 218 3.810941 AGTCGTGTATTTTTCAAAGCCGA 59.189 39.130 0.00 0.00 0.00 5.54
214 225 5.050634 GTGTGTGCTAGTCGTGTATTTTTCA 60.051 40.000 0.00 0.00 0.00 2.69
216 227 4.084745 CGTGTGTGCTAGTCGTGTATTTTT 60.085 41.667 0.00 0.00 0.00 1.94
221 232 1.196127 CTCGTGTGTGCTAGTCGTGTA 59.804 52.381 0.00 0.00 0.00 2.90
254 265 3.925362 ATACACGGCGCGCTTCACA 62.925 57.895 32.29 14.23 0.00 3.58
284 295 1.132849 CCAAAAACCCTCTTTCCCCCT 60.133 52.381 0.00 0.00 0.00 4.79
285 296 1.348064 CCAAAAACCCTCTTTCCCCC 58.652 55.000 0.00 0.00 0.00 5.40
331 343 2.305928 CCGCCAATTATGATGGGTTGA 58.694 47.619 0.00 0.00 38.44 3.18
342 354 2.437002 GGTCACCGCCGCCAATTA 60.437 61.111 0.00 0.00 0.00 1.40
355 367 2.636412 CGCTTCTCCCACTCGGTCA 61.636 63.158 0.00 0.00 0.00 4.02
435 448 2.032071 CTTGAACGGCCGTCCCTT 59.968 61.111 34.29 17.10 0.00 3.95
440 453 4.344865 ATGCCCTTGAACGGCCGT 62.345 61.111 28.70 28.70 46.48 5.68
456 469 0.603569 CTCCCGCTATTAGGCACGAT 59.396 55.000 0.00 0.00 0.00 3.73
467 480 0.970937 CCAAGTCCACTCTCCCGCTA 60.971 60.000 0.00 0.00 0.00 4.26
469 482 2.266055 CCAAGTCCACTCTCCCGC 59.734 66.667 0.00 0.00 0.00 6.13
527 541 2.801631 GGCGCTCCTCTGGTAGCAT 61.802 63.158 7.64 0.00 38.70 3.79
546 560 0.741221 GCCTTGGCTTCTTCGTCGAT 60.741 55.000 4.11 0.00 0.00 3.59
564 578 1.796796 GATGACCGTCTTGCTTGGC 59.203 57.895 0.00 0.00 0.00 4.52
567 581 1.066858 ACATCGATGACCGTCTTGCTT 60.067 47.619 31.33 1.45 39.75 3.91
575 589 2.588877 GGGCCACATCGATGACCG 60.589 66.667 31.33 17.74 40.25 4.79
580 594 4.241555 GAGCGGGGCCACATCGAT 62.242 66.667 5.46 0.89 0.00 3.59
628 642 8.506437 TGTTAAGTTGATTGAAGCAGACATAAG 58.494 33.333 0.00 0.00 0.00 1.73
721 1618 0.802494 CGTCCTGGTATGTTTGCACC 59.198 55.000 0.00 0.00 35.24 5.01
793 1691 2.943033 GAGGAAATTGTACACCGATGGG 59.057 50.000 0.00 0.00 40.11 4.00
828 1726 2.180204 GCGCGTGCCACATAGGATT 61.180 57.895 10.56 0.00 41.22 3.01
834 1732 3.055110 TGAATGCGCGTGCCACAT 61.055 55.556 19.87 1.92 41.78 3.21
839 1783 1.297158 GATGAGTGAATGCGCGTGC 60.297 57.895 15.48 15.48 43.20 5.34
1140 2196 3.029564 GAGCGTCGTCAGAGCGTCT 62.030 63.158 0.00 0.00 35.78 4.18
1261 2317 1.039785 TCGTCATCAGGGCAGAGGAG 61.040 60.000 0.00 0.00 0.00 3.69
1382 3791 2.203907 AGTGGACCCAGCTGAGCT 60.204 61.111 17.39 0.00 40.77 4.09
1399 3832 1.300620 CAAGCGTCGACACCTTCCA 60.301 57.895 17.16 0.00 0.00 3.53
1402 3835 0.670546 CCATCAAGCGTCGACACCTT 60.671 55.000 17.16 13.89 0.00 3.50
1491 3930 2.267961 GTGATCCGGGCCTCGTTT 59.732 61.111 0.84 0.00 37.11 3.60
1501 3940 0.243907 ACGACAGTCTTGGTGATCCG 59.756 55.000 0.00 0.00 36.30 4.18
1542 3981 1.585521 CACGGCGTCGATGAGGTAC 60.586 63.158 20.03 0.00 40.11 3.34
1590 4029 1.281656 CAAAACGCCCCAGAACGAC 59.718 57.895 0.00 0.00 0.00 4.34
1612 4051 5.982465 AGTACTAGAAGGACGACGATAAC 57.018 43.478 0.00 0.00 0.00 1.89
1636 4078 2.949678 CGCGATCCCGACGACAAG 60.950 66.667 0.00 0.00 37.45 3.16
1680 4122 4.988540 TCCATTTGATCGTAGCGGAATTAG 59.011 41.667 0.00 0.00 0.00 1.73
1742 5163 3.317711 ACCAACAAATCGCATGAACTGAA 59.682 39.130 0.00 0.00 0.00 3.02
1930 5986 9.490379 CTCCGTCCTAGTAATATAAAAGCATTT 57.510 33.333 0.00 0.00 42.41 2.32
1931 5987 8.648693 ACTCCGTCCTAGTAATATAAAAGCATT 58.351 33.333 0.00 0.00 0.00 3.56
1932 5988 8.088981 CACTCCGTCCTAGTAATATAAAAGCAT 58.911 37.037 0.00 0.00 0.00 3.79
1933 5989 7.286087 TCACTCCGTCCTAGTAATATAAAAGCA 59.714 37.037 0.00 0.00 0.00 3.91
1934 5990 7.655490 TCACTCCGTCCTAGTAATATAAAAGC 58.345 38.462 0.00 0.00 0.00 3.51
1935 5991 8.848182 ACTCACTCCGTCCTAGTAATATAAAAG 58.152 37.037 0.00 0.00 0.00 2.27
1936 5992 8.757982 ACTCACTCCGTCCTAGTAATATAAAA 57.242 34.615 0.00 0.00 0.00 1.52
1937 5993 9.499479 CTACTCACTCCGTCCTAGTAATATAAA 57.501 37.037 0.00 0.00 0.00 1.40
1938 5994 8.654997 ACTACTCACTCCGTCCTAGTAATATAA 58.345 37.037 0.00 0.00 0.00 0.98
1939 5995 8.200024 ACTACTCACTCCGTCCTAGTAATATA 57.800 38.462 0.00 0.00 0.00 0.86
1940 5996 7.077050 ACTACTCACTCCGTCCTAGTAATAT 57.923 40.000 0.00 0.00 0.00 1.28
1941 5997 6.491714 ACTACTCACTCCGTCCTAGTAATA 57.508 41.667 0.00 0.00 0.00 0.98
1942 5998 5.370875 ACTACTCACTCCGTCCTAGTAAT 57.629 43.478 0.00 0.00 0.00 1.89
1943 5999 4.833478 ACTACTCACTCCGTCCTAGTAA 57.167 45.455 0.00 0.00 0.00 2.24
1944 6000 4.833478 AACTACTCACTCCGTCCTAGTA 57.167 45.455 0.00 0.00 0.00 1.82
1945 6001 3.717452 AACTACTCACTCCGTCCTAGT 57.283 47.619 0.00 0.00 0.00 2.57
1946 6002 6.506500 TTAAAACTACTCACTCCGTCCTAG 57.493 41.667 0.00 0.00 0.00 3.02
1947 6003 7.472334 AATTAAAACTACTCACTCCGTCCTA 57.528 36.000 0.00 0.00 0.00 2.94
1948 6004 5.997384 ATTAAAACTACTCACTCCGTCCT 57.003 39.130 0.00 0.00 0.00 3.85
1949 6005 7.816513 AGTTAATTAAAACTACTCACTCCGTCC 59.183 37.037 0.00 0.00 37.93 4.79
1950 6006 8.754230 AGTTAATTAAAACTACTCACTCCGTC 57.246 34.615 0.00 0.00 37.93 4.79
1951 6007 8.362639 TGAGTTAATTAAAACTACTCACTCCGT 58.637 33.333 11.27 0.00 40.01 4.69
1952 6008 8.752766 TGAGTTAATTAAAACTACTCACTCCG 57.247 34.615 11.27 0.00 40.01 4.63
1969 6025 9.757227 GTTCAGAGAGCATAATAGTGAGTTAAT 57.243 33.333 0.00 0.00 0.00 1.40
1970 6026 8.198109 GGTTCAGAGAGCATAATAGTGAGTTAA 58.802 37.037 0.00 0.00 0.00 2.01
1971 6027 7.342026 TGGTTCAGAGAGCATAATAGTGAGTTA 59.658 37.037 0.00 0.00 0.00 2.24
1972 6028 6.155221 TGGTTCAGAGAGCATAATAGTGAGTT 59.845 38.462 0.00 0.00 0.00 3.01
1973 6029 5.658634 TGGTTCAGAGAGCATAATAGTGAGT 59.341 40.000 0.00 0.00 0.00 3.41
1974 6030 6.154203 TGGTTCAGAGAGCATAATAGTGAG 57.846 41.667 0.00 0.00 0.00 3.51
1975 6031 6.544928 TTGGTTCAGAGAGCATAATAGTGA 57.455 37.500 0.00 0.00 0.00 3.41
1976 6032 6.237942 CGTTTGGTTCAGAGAGCATAATAGTG 60.238 42.308 0.00 0.00 0.00 2.74
2006 6068 7.663043 TGAACTAACAGTGGGGTTTAAAATT 57.337 32.000 0.00 0.00 32.29 1.82
2021 6088 4.104102 ACACCCCTCTGAAATGAACTAACA 59.896 41.667 0.00 0.00 0.00 2.41
2090 6212 9.491675 AAATGAGCATAGATAGAGTGAGATTTG 57.508 33.333 0.00 0.00 0.00 2.32
2097 6219 7.117523 GCAGGTTAAATGAGCATAGATAGAGTG 59.882 40.741 0.00 0.00 0.00 3.51
2101 6274 7.157347 TCTGCAGGTTAAATGAGCATAGATAG 58.843 38.462 15.13 0.00 34.35 2.08
2110 6283 3.937706 CAGGACTCTGCAGGTTAAATGAG 59.062 47.826 15.13 3.70 33.86 2.90
2111 6284 3.942829 CAGGACTCTGCAGGTTAAATGA 58.057 45.455 15.13 0.00 33.86 2.57
2127 6300 4.384599 TGCATGACACAGCAGGAC 57.615 55.556 0.00 0.00 35.51 3.85
2137 6310 7.978982 AGAACAAAGATATACAAGTGCATGAC 58.021 34.615 0.00 0.00 0.00 3.06
2178 6351 1.553704 ACGACCCTTACACCATCTTCC 59.446 52.381 0.00 0.00 0.00 3.46
2198 6371 2.027073 CGAAGCGTAGGCAGCAACA 61.027 57.895 10.48 0.00 43.41 3.33
2200 6373 2.434185 CCGAAGCGTAGGCAGCAA 60.434 61.111 10.48 0.00 43.41 3.91
2239 6412 0.594796 GTGTTCTTGTTGCCCTTGCG 60.595 55.000 0.00 0.00 41.78 4.85
2370 6550 2.669569 CCACCCTGCTGAACACCG 60.670 66.667 0.00 0.00 0.00 4.94
2450 6667 9.227777 GTTCCCGGCAAAAGATATATATAAGTT 57.772 33.333 0.00 0.00 0.00 2.66
2616 6845 3.387962 ACTCCTCCCTCATCTAATGCAA 58.612 45.455 0.00 0.00 0.00 4.08
2804 7035 4.689549 TGAAGCGACGGGGGAGGA 62.690 66.667 0.00 0.00 0.00 3.71
2805 7036 4.148825 CTGAAGCGACGGGGGAGG 62.149 72.222 0.00 0.00 0.00 4.30
2806 7037 4.821589 GCTGAAGCGACGGGGGAG 62.822 72.222 0.00 0.00 0.00 4.30
2808 7039 4.697756 TTGCTGAAGCGACGGGGG 62.698 66.667 0.00 0.00 45.83 5.40
2809 7040 3.423154 GTTGCTGAAGCGACGGGG 61.423 66.667 6.92 0.00 44.53 5.73
2814 7045 3.876589 GACGGGGTTGCTGAAGCGA 62.877 63.158 0.00 0.00 45.83 4.93
2815 7046 3.423154 GACGGGGTTGCTGAAGCG 61.423 66.667 0.00 0.00 45.83 4.68
2816 7047 3.056328 GGACGGGGTTGCTGAAGC 61.056 66.667 0.00 0.00 42.50 3.86
2817 7048 2.742372 CGGACGGGGTTGCTGAAG 60.742 66.667 0.00 0.00 0.00 3.02
2818 7049 3.524648 GACGGACGGGGTTGCTGAA 62.525 63.158 0.00 0.00 0.00 3.02
2819 7050 3.998672 GACGGACGGGGTTGCTGA 61.999 66.667 0.00 0.00 0.00 4.26
2822 7053 4.754667 GAGGACGGACGGGGTTGC 62.755 72.222 0.00 0.00 0.00 4.17
2823 7054 2.995574 AGAGGACGGACGGGGTTG 60.996 66.667 0.00 0.00 0.00 3.77
2824 7055 2.995574 CAGAGGACGGACGGGGTT 60.996 66.667 0.00 0.00 0.00 4.11
2828 7059 3.827898 GAGGCAGAGGACGGACGG 61.828 72.222 0.00 0.00 0.00 4.79
2829 7060 3.827898 GGAGGCAGAGGACGGACG 61.828 72.222 0.00 0.00 0.00 4.79
2830 7061 3.462678 GGGAGGCAGAGGACGGAC 61.463 72.222 0.00 0.00 0.00 4.79
2831 7062 1.944896 TATGGGAGGCAGAGGACGGA 61.945 60.000 0.00 0.00 0.00 4.69
2832 7063 1.457643 TATGGGAGGCAGAGGACGG 60.458 63.158 0.00 0.00 0.00 4.79
2833 7064 2.045280 CTATGGGAGGCAGAGGACG 58.955 63.158 0.00 0.00 0.00 4.79
2834 7065 1.050988 TGCTATGGGAGGCAGAGGAC 61.051 60.000 0.00 0.00 34.22 3.85
2835 7066 0.326522 TTGCTATGGGAGGCAGAGGA 60.327 55.000 0.00 0.00 39.68 3.71
2836 7067 0.179034 GTTGCTATGGGAGGCAGAGG 60.179 60.000 0.00 0.00 39.68 3.69
2837 7068 0.179034 GGTTGCTATGGGAGGCAGAG 60.179 60.000 0.00 0.00 39.68 3.35
2838 7069 1.635817 GGGTTGCTATGGGAGGCAGA 61.636 60.000 0.00 0.00 39.68 4.26
2839 7070 1.152881 GGGTTGCTATGGGAGGCAG 60.153 63.158 0.00 0.00 39.68 4.85
2840 7071 1.288508 ATGGGTTGCTATGGGAGGCA 61.289 55.000 0.00 0.00 36.62 4.75
2841 7072 0.538287 GATGGGTTGCTATGGGAGGC 60.538 60.000 0.00 0.00 0.00 4.70
2842 7073 0.250467 CGATGGGTTGCTATGGGAGG 60.250 60.000 0.00 0.00 0.00 4.30
2843 7074 0.250467 CCGATGGGTTGCTATGGGAG 60.250 60.000 0.00 0.00 0.00 4.30
2844 7075 1.836391 CCGATGGGTTGCTATGGGA 59.164 57.895 0.00 0.00 0.00 4.37
2845 7076 1.898574 GCCGATGGGTTGCTATGGG 60.899 63.158 0.00 0.00 34.97 4.00
2846 7077 2.253758 CGCCGATGGGTTGCTATGG 61.254 63.158 0.00 0.00 34.97 2.74
2847 7078 2.896801 GCGCCGATGGGTTGCTATG 61.897 63.158 0.00 0.00 34.99 2.23
2848 7079 2.591715 GCGCCGATGGGTTGCTAT 60.592 61.111 0.00 0.00 34.99 2.97
2849 7080 3.733344 GAGCGCCGATGGGTTGCTA 62.733 63.158 13.90 0.00 43.99 3.49
2852 7083 3.499737 GTGAGCGCCGATGGGTTG 61.500 66.667 2.29 0.00 34.97 3.77
2853 7084 4.778143 GGTGAGCGCCGATGGGTT 62.778 66.667 2.29 0.00 34.97 4.11
2857 7088 4.827087 AGCAGGTGAGCGCCGATG 62.827 66.667 2.29 0.00 40.15 3.84
2858 7089 4.087892 AAGCAGGTGAGCGCCGAT 62.088 61.111 2.29 0.00 40.15 4.18
2859 7090 4.742201 GAAGCAGGTGAGCGCCGA 62.742 66.667 2.29 0.00 40.15 5.54
2902 7133 1.078848 GGATTGGTGCAGCGAGACT 60.079 57.895 12.16 0.00 0.00 3.24
2903 7134 2.109126 GGGATTGGTGCAGCGAGAC 61.109 63.158 12.16 8.09 0.00 3.36
2904 7135 2.268920 GGGATTGGTGCAGCGAGA 59.731 61.111 12.16 0.30 0.00 4.04
2905 7136 2.825836 GGGGATTGGTGCAGCGAG 60.826 66.667 12.16 0.00 0.00 5.03
2906 7137 4.424711 GGGGGATTGGTGCAGCGA 62.425 66.667 8.58 8.58 0.00 4.93
2907 7138 3.944250 AAGGGGGATTGGTGCAGCG 62.944 63.158 11.91 0.00 0.00 5.18
2908 7139 1.607801 GAAAGGGGGATTGGTGCAGC 61.608 60.000 9.47 9.47 0.00 5.25
2909 7140 0.040204 AGAAAGGGGGATTGGTGCAG 59.960 55.000 0.00 0.00 0.00 4.41
2910 7141 0.251742 CAGAAAGGGGGATTGGTGCA 60.252 55.000 0.00 0.00 0.00 4.57
2911 7142 1.607801 GCAGAAAGGGGGATTGGTGC 61.608 60.000 0.00 0.00 0.00 5.01
2912 7143 0.040204 AGCAGAAAGGGGGATTGGTG 59.960 55.000 0.00 0.00 0.00 4.17
2913 7144 0.786435 AAGCAGAAAGGGGGATTGGT 59.214 50.000 0.00 0.00 0.00 3.67
2914 7145 1.188863 CAAGCAGAAAGGGGGATTGG 58.811 55.000 0.00 0.00 0.00 3.16
2915 7146 2.220653 TCAAGCAGAAAGGGGGATTG 57.779 50.000 0.00 0.00 0.00 2.67
2916 7147 3.479866 AATCAAGCAGAAAGGGGGATT 57.520 42.857 0.00 0.00 0.00 3.01
2917 7148 3.102204 CAAATCAAGCAGAAAGGGGGAT 58.898 45.455 0.00 0.00 0.00 3.85
2918 7149 2.158325 ACAAATCAAGCAGAAAGGGGGA 60.158 45.455 0.00 0.00 0.00 4.81
2919 7150 2.232208 GACAAATCAAGCAGAAAGGGGG 59.768 50.000 0.00 0.00 0.00 5.40
2920 7151 2.095059 CGACAAATCAAGCAGAAAGGGG 60.095 50.000 0.00 0.00 0.00 4.79
2921 7152 2.669391 GCGACAAATCAAGCAGAAAGGG 60.669 50.000 0.00 0.00 0.00 3.95
2922 7153 2.227388 AGCGACAAATCAAGCAGAAAGG 59.773 45.455 0.00 0.00 0.00 3.11
2923 7154 3.188048 AGAGCGACAAATCAAGCAGAAAG 59.812 43.478 0.00 0.00 0.00 2.62
2924 7155 3.058708 CAGAGCGACAAATCAAGCAGAAA 60.059 43.478 0.00 0.00 0.00 2.52
2925 7156 2.481568 CAGAGCGACAAATCAAGCAGAA 59.518 45.455 0.00 0.00 0.00 3.02
2926 7157 2.071540 CAGAGCGACAAATCAAGCAGA 58.928 47.619 0.00 0.00 0.00 4.26
2927 7158 2.071540 TCAGAGCGACAAATCAAGCAG 58.928 47.619 0.00 0.00 0.00 4.24
2928 7159 2.168326 TCAGAGCGACAAATCAAGCA 57.832 45.000 0.00 0.00 0.00 3.91
2929 7160 2.223203 CCATCAGAGCGACAAATCAAGC 60.223 50.000 0.00 0.00 0.00 4.01
2930 7161 3.005554 ACCATCAGAGCGACAAATCAAG 58.994 45.455 0.00 0.00 0.00 3.02
2931 7162 3.002791 GACCATCAGAGCGACAAATCAA 58.997 45.455 0.00 0.00 0.00 2.57
2932 7163 2.028203 TGACCATCAGAGCGACAAATCA 60.028 45.455 0.00 0.00 0.00 2.57
2933 7164 2.349886 GTGACCATCAGAGCGACAAATC 59.650 50.000 0.00 0.00 0.00 2.17
2934 7165 2.350522 GTGACCATCAGAGCGACAAAT 58.649 47.619 0.00 0.00 0.00 2.32
2935 7166 1.608025 GGTGACCATCAGAGCGACAAA 60.608 52.381 0.00 0.00 0.00 2.83
2936 7167 0.037326 GGTGACCATCAGAGCGACAA 60.037 55.000 0.00 0.00 0.00 3.18
2937 7168 0.900182 AGGTGACCATCAGAGCGACA 60.900 55.000 3.63 0.00 0.00 4.35
2938 7169 0.179124 GAGGTGACCATCAGAGCGAC 60.179 60.000 3.63 0.00 0.00 5.19
2939 7170 0.611896 TGAGGTGACCATCAGAGCGA 60.612 55.000 3.63 0.00 0.00 4.93
2940 7171 0.459237 GTGAGGTGACCATCAGAGCG 60.459 60.000 3.63 0.00 0.00 5.03
2941 7172 0.459237 CGTGAGGTGACCATCAGAGC 60.459 60.000 3.63 0.00 0.00 4.09
2942 7173 1.177401 TCGTGAGGTGACCATCAGAG 58.823 55.000 3.63 2.82 0.00 3.35
2943 7174 1.751351 GATCGTGAGGTGACCATCAGA 59.249 52.381 3.63 0.00 0.00 3.27
2944 7175 1.478105 TGATCGTGAGGTGACCATCAG 59.522 52.381 3.63 0.00 0.00 2.90
2945 7176 1.555967 TGATCGTGAGGTGACCATCA 58.444 50.000 3.63 0.35 0.00 3.07
2946 7177 2.093973 AGTTGATCGTGAGGTGACCATC 60.094 50.000 3.63 0.00 0.00 3.51
2947 7178 1.902508 AGTTGATCGTGAGGTGACCAT 59.097 47.619 3.63 0.00 0.00 3.55
2948 7179 1.000843 CAGTTGATCGTGAGGTGACCA 59.999 52.381 3.63 0.00 0.00 4.02
2949 7180 1.714794 CAGTTGATCGTGAGGTGACC 58.285 55.000 0.00 0.00 0.00 4.02
2950 7181 1.071605 GCAGTTGATCGTGAGGTGAC 58.928 55.000 0.00 0.00 0.00 3.67
2951 7182 0.678950 TGCAGTTGATCGTGAGGTGA 59.321 50.000 0.00 0.00 0.00 4.02
2952 7183 1.395954 CATGCAGTTGATCGTGAGGTG 59.604 52.381 0.00 0.00 0.00 4.00
2953 7184 1.676916 CCATGCAGTTGATCGTGAGGT 60.677 52.381 0.00 0.00 0.00 3.85
2954 7185 1.012086 CCATGCAGTTGATCGTGAGG 58.988 55.000 0.00 0.00 0.00 3.86
2955 7186 0.376152 GCCATGCAGTTGATCGTGAG 59.624 55.000 0.00 0.00 0.00 3.51
2956 7187 0.036105 AGCCATGCAGTTGATCGTGA 60.036 50.000 0.00 0.00 0.00 4.35
2957 7188 1.596260 CTAGCCATGCAGTTGATCGTG 59.404 52.381 0.00 0.00 0.00 4.35
2958 7189 1.473965 CCTAGCCATGCAGTTGATCGT 60.474 52.381 0.00 0.00 0.00 3.73
2959 7190 1.224075 CCTAGCCATGCAGTTGATCG 58.776 55.000 0.00 0.00 0.00 3.69
2960 7191 0.950116 GCCTAGCCATGCAGTTGATC 59.050 55.000 0.00 0.00 0.00 2.92
2961 7192 0.256752 TGCCTAGCCATGCAGTTGAT 59.743 50.000 0.00 0.00 32.77 2.57
2962 7193 1.684629 TGCCTAGCCATGCAGTTGA 59.315 52.632 0.00 0.00 32.77 3.18
2963 7194 4.324471 TGCCTAGCCATGCAGTTG 57.676 55.556 0.00 0.00 32.77 3.16
2967 7198 0.680921 GGTTTCTGCCTAGCCATGCA 60.681 55.000 0.00 0.00 35.86 3.96
2968 7199 0.394899 AGGTTTCTGCCTAGCCATGC 60.395 55.000 0.00 0.00 37.04 4.06
2969 7200 1.673168 GAGGTTTCTGCCTAGCCATG 58.327 55.000 0.00 0.00 39.34 3.66
2970 7201 0.548510 GGAGGTTTCTGCCTAGCCAT 59.451 55.000 0.00 0.00 39.34 4.40
2971 7202 1.562672 GGGAGGTTTCTGCCTAGCCA 61.563 60.000 0.00 0.00 46.56 4.75
2972 7203 1.224870 GGGAGGTTTCTGCCTAGCC 59.775 63.158 0.00 0.00 46.56 3.93
2973 7204 4.966123 GGGAGGTTTCTGCCTAGC 57.034 61.111 0.00 0.00 46.56 3.42
2978 7209 4.699522 ACCGCGGGAGGTTTCTGC 62.700 66.667 31.76 0.00 43.00 4.26
2979 7210 2.434359 GACCGCGGGAGGTTTCTG 60.434 66.667 31.76 0.00 46.09 3.02
2980 7211 3.703127 GGACCGCGGGAGGTTTCT 61.703 66.667 31.76 4.91 46.09 2.52
2981 7212 3.660732 GAGGACCGCGGGAGGTTTC 62.661 68.421 31.76 16.58 46.09 2.78
2982 7213 3.703127 GAGGACCGCGGGAGGTTT 61.703 66.667 31.76 6.78 46.09 3.27
2988 7219 4.452733 GAACTGGAGGACCGCGGG 62.453 72.222 31.76 12.27 39.42 6.13
2989 7220 4.796231 CGAACTGGAGGACCGCGG 62.796 72.222 26.86 26.86 39.42 6.46
2990 7221 4.796231 CCGAACTGGAGGACCGCG 62.796 72.222 0.00 0.00 42.00 6.46
2992 7223 3.358076 GAGCCGAACTGGAGGACCG 62.358 68.421 0.00 0.00 42.00 4.79
2993 7224 2.579738 GAGCCGAACTGGAGGACC 59.420 66.667 0.00 0.00 42.00 4.46
2994 7225 2.182030 CGAGCCGAACTGGAGGAC 59.818 66.667 0.00 0.00 42.00 3.85
2995 7226 3.068691 CCGAGCCGAACTGGAGGA 61.069 66.667 0.00 0.00 42.00 3.71
2996 7227 4.148825 CCCGAGCCGAACTGGAGG 62.149 72.222 0.00 0.00 42.00 4.30
2997 7228 4.821589 GCCCGAGCCGAACTGGAG 62.822 72.222 0.00 0.00 42.00 3.86
3014 7245 4.351054 AAGGCGCAACCAGGGAGG 62.351 66.667 10.83 0.00 43.14 4.30
3015 7246 2.747855 GAAGGCGCAACCAGGGAG 60.748 66.667 10.83 0.00 43.14 4.30
3016 7247 2.748058 GAAGAAGGCGCAACCAGGGA 62.748 60.000 10.83 0.00 43.14 4.20
3017 7248 2.282462 AAGAAGGCGCAACCAGGG 60.282 61.111 10.83 0.00 43.14 4.45
3018 7249 2.680913 CGAAGAAGGCGCAACCAGG 61.681 63.158 10.83 0.00 43.14 4.45
3019 7250 2.863153 CGAAGAAGGCGCAACCAG 59.137 61.111 10.83 0.00 43.14 4.00
3026 7257 2.126071 TCGAAGGCGAAGAAGGCG 60.126 61.111 0.00 0.00 44.78 5.52
3035 7266 1.079127 AAGGTCACCATCGAAGGCG 60.079 57.895 6.60 0.00 39.35 5.52
3036 7267 0.744771 GGAAGGTCACCATCGAAGGC 60.745 60.000 6.60 0.00 0.00 4.35
3037 7268 0.905357 AGGAAGGTCACCATCGAAGG 59.095 55.000 4.85 4.85 0.00 3.46
3038 7269 1.276421 ACAGGAAGGTCACCATCGAAG 59.724 52.381 0.00 0.00 0.00 3.79
3039 7270 1.348064 ACAGGAAGGTCACCATCGAA 58.652 50.000 0.00 0.00 0.00 3.71
3040 7271 1.275291 GAACAGGAAGGTCACCATCGA 59.725 52.381 0.00 0.00 32.78 3.59
3041 7272 1.726853 GAACAGGAAGGTCACCATCG 58.273 55.000 0.00 0.00 32.78 3.84
3042 7273 1.676014 CCGAACAGGAAGGTCACCATC 60.676 57.143 0.00 0.00 45.00 3.51
3043 7274 0.324943 CCGAACAGGAAGGTCACCAT 59.675 55.000 0.00 0.00 45.00 3.55
3044 7275 1.752198 CCGAACAGGAAGGTCACCA 59.248 57.895 0.00 0.00 45.00 4.17
3045 7276 1.003718 CCCGAACAGGAAGGTCACC 60.004 63.158 0.00 0.00 45.00 4.02
3046 7277 0.037232 CTCCCGAACAGGAAGGTCAC 60.037 60.000 0.00 0.00 45.00 3.67
3047 7278 1.192146 CCTCCCGAACAGGAAGGTCA 61.192 60.000 0.00 0.00 45.00 4.02
3048 7279 1.192803 ACCTCCCGAACAGGAAGGTC 61.193 60.000 0.00 0.00 45.00 3.85
3049 7280 1.152096 ACCTCCCGAACAGGAAGGT 60.152 57.895 0.00 0.00 45.00 3.50
3050 7281 1.296715 CACCTCCCGAACAGGAAGG 59.703 63.158 1.67 0.00 45.00 3.46
3051 7282 1.296715 CCACCTCCCGAACAGGAAG 59.703 63.158 1.67 0.00 45.00 3.46
3052 7283 2.890766 GCCACCTCCCGAACAGGAA 61.891 63.158 1.67 0.00 45.00 3.36
3053 7284 3.319198 GCCACCTCCCGAACAGGA 61.319 66.667 1.67 0.00 45.00 3.86
3054 7285 3.636231 TGCCACCTCCCGAACAGG 61.636 66.667 0.00 0.00 40.63 4.00
3055 7286 2.358737 GTGCCACCTCCCGAACAG 60.359 66.667 0.00 0.00 0.00 3.16
3056 7287 3.948719 GGTGCCACCTCCCGAACA 61.949 66.667 6.63 0.00 34.73 3.18
3071 7302 4.208632 GCATTAGACAGCGCAGGT 57.791 55.556 11.47 7.45 41.48 4.00
3077 7308 0.041839 CAATCGCCGCATTAGACAGC 60.042 55.000 0.00 0.00 0.00 4.40
3078 7309 1.290203 ACAATCGCCGCATTAGACAG 58.710 50.000 0.00 0.00 0.00 3.51
3079 7310 1.732941 AACAATCGCCGCATTAGACA 58.267 45.000 0.00 0.00 0.00 3.41
3080 7311 2.705154 GAAACAATCGCCGCATTAGAC 58.295 47.619 0.00 0.00 0.00 2.59
3081 7312 1.326245 CGAAACAATCGCCGCATTAGA 59.674 47.619 0.00 0.00 45.89 2.10
3082 7313 1.730176 CGAAACAATCGCCGCATTAG 58.270 50.000 0.00 0.00 45.89 1.73
3083 7314 3.887777 CGAAACAATCGCCGCATTA 57.112 47.368 0.00 0.00 45.89 1.90
3084 7315 4.763593 CGAAACAATCGCCGCATT 57.236 50.000 0.00 0.00 45.89 3.56
3102 7333 3.120165 GGCGAAATCTTCTGGTCTTTGAC 60.120 47.826 0.00 0.00 0.00 3.18
3103 7334 3.074412 GGCGAAATCTTCTGGTCTTTGA 58.926 45.455 0.00 0.00 0.00 2.69
3104 7335 2.162408 GGGCGAAATCTTCTGGTCTTTG 59.838 50.000 0.00 0.00 0.00 2.77
3105 7336 2.437413 GGGCGAAATCTTCTGGTCTTT 58.563 47.619 0.00 0.00 0.00 2.52
3106 7337 1.340114 GGGGCGAAATCTTCTGGTCTT 60.340 52.381 0.00 0.00 0.00 3.01
3107 7338 0.253327 GGGGCGAAATCTTCTGGTCT 59.747 55.000 0.00 0.00 0.00 3.85
3108 7339 0.035439 TGGGGCGAAATCTTCTGGTC 60.035 55.000 0.00 0.00 0.00 4.02
3109 7340 0.404040 TTGGGGCGAAATCTTCTGGT 59.596 50.000 0.00 0.00 0.00 4.00
3110 7341 1.202348 GTTTGGGGCGAAATCTTCTGG 59.798 52.381 0.00 0.00 0.00 3.86
3111 7342 2.162408 GAGTTTGGGGCGAAATCTTCTG 59.838 50.000 0.00 0.00 0.00 3.02
3112 7343 2.040412 AGAGTTTGGGGCGAAATCTTCT 59.960 45.455 0.00 0.00 29.31 2.85
3113 7344 2.437413 AGAGTTTGGGGCGAAATCTTC 58.563 47.619 0.00 0.00 29.31 2.87
3114 7345 2.586648 AGAGTTTGGGGCGAAATCTT 57.413 45.000 0.00 0.00 29.31 2.40
3115 7346 2.040412 AGAAGAGTTTGGGGCGAAATCT 59.960 45.455 0.00 0.00 34.23 2.40
3116 7347 2.162408 CAGAAGAGTTTGGGGCGAAATC 59.838 50.000 0.00 0.00 0.00 2.17
3117 7348 2.162681 CAGAAGAGTTTGGGGCGAAAT 58.837 47.619 0.00 0.00 0.00 2.17
3118 7349 1.604604 CAGAAGAGTTTGGGGCGAAA 58.395 50.000 0.00 0.00 0.00 3.46
3119 7350 0.250727 CCAGAAGAGTTTGGGGCGAA 60.251 55.000 0.00 0.00 0.00 4.70
3120 7351 1.125093 TCCAGAAGAGTTTGGGGCGA 61.125 55.000 0.00 0.00 35.13 5.54
3121 7352 0.250727 TTCCAGAAGAGTTTGGGGCG 60.251 55.000 0.00 0.00 35.13 6.13
3122 7353 1.539157 CTTCCAGAAGAGTTTGGGGC 58.461 55.000 0.90 0.00 40.79 5.80
3123 7354 1.272147 CCCTTCCAGAAGAGTTTGGGG 60.272 57.143 9.00 0.00 40.79 4.96
3124 7355 1.888391 GCCCTTCCAGAAGAGTTTGGG 60.888 57.143 9.00 2.70 40.79 4.12
3125 7356 1.074566 AGCCCTTCCAGAAGAGTTTGG 59.925 52.381 9.00 2.59 40.79 3.28
3126 7357 2.575805 AGCCCTTCCAGAAGAGTTTG 57.424 50.000 9.00 0.00 40.79 2.93
3127 7358 2.551071 CGAAGCCCTTCCAGAAGAGTTT 60.551 50.000 9.00 0.00 40.79 2.66
3128 7359 1.002544 CGAAGCCCTTCCAGAAGAGTT 59.997 52.381 9.00 0.00 40.79 3.01
3129 7360 0.610687 CGAAGCCCTTCCAGAAGAGT 59.389 55.000 9.00 0.00 40.79 3.24
3130 7361 3.450028 CGAAGCCCTTCCAGAAGAG 57.550 57.895 9.00 0.00 40.79 2.85
3144 7375 0.383231 GCCTCATCCCAAATGCGAAG 59.617 55.000 0.00 0.00 0.00 3.79
3145 7376 0.034186 AGCCTCATCCCAAATGCGAA 60.034 50.000 0.00 0.00 0.00 4.70
3146 7377 0.749091 CAGCCTCATCCCAAATGCGA 60.749 55.000 0.00 0.00 0.00 5.10
3147 7378 1.731433 CCAGCCTCATCCCAAATGCG 61.731 60.000 0.00 0.00 0.00 4.73
3148 7379 0.396139 TCCAGCCTCATCCCAAATGC 60.396 55.000 0.00 0.00 0.00 3.56
3149 7380 1.961394 CATCCAGCCTCATCCCAAATG 59.039 52.381 0.00 0.00 0.00 2.32
3150 7381 1.133262 CCATCCAGCCTCATCCCAAAT 60.133 52.381 0.00 0.00 0.00 2.32
3151 7382 0.259647 CCATCCAGCCTCATCCCAAA 59.740 55.000 0.00 0.00 0.00 3.28
3152 7383 1.648302 CCCATCCAGCCTCATCCCAA 61.648 60.000 0.00 0.00 0.00 4.12
3153 7384 2.080536 CCCATCCAGCCTCATCCCA 61.081 63.158 0.00 0.00 0.00 4.37
3154 7385 1.771746 TCCCATCCAGCCTCATCCC 60.772 63.158 0.00 0.00 0.00 3.85
3155 7386 1.059006 AGTCCCATCCAGCCTCATCC 61.059 60.000 0.00 0.00 0.00 3.51
3156 7387 0.108207 CAGTCCCATCCAGCCTCATC 59.892 60.000 0.00 0.00 0.00 2.92
3157 7388 1.351080 CCAGTCCCATCCAGCCTCAT 61.351 60.000 0.00 0.00 0.00 2.90
3158 7389 1.997311 CCAGTCCCATCCAGCCTCA 60.997 63.158 0.00 0.00 0.00 3.86
3159 7390 2.914289 CCAGTCCCATCCAGCCTC 59.086 66.667 0.00 0.00 0.00 4.70
3160 7391 3.415087 GCCAGTCCCATCCAGCCT 61.415 66.667 0.00 0.00 0.00 4.58
3161 7392 3.286694 TTGCCAGTCCCATCCAGCC 62.287 63.158 0.00 0.00 0.00 4.85
3162 7393 1.751927 CTTGCCAGTCCCATCCAGC 60.752 63.158 0.00 0.00 0.00 4.85
3163 7394 0.038744 AACTTGCCAGTCCCATCCAG 59.961 55.000 0.00 0.00 30.45 3.86
3164 7395 0.251297 CAACTTGCCAGTCCCATCCA 60.251 55.000 0.00 0.00 30.45 3.41
3165 7396 0.251341 ACAACTTGCCAGTCCCATCC 60.251 55.000 0.00 0.00 30.45 3.51
3166 7397 1.541588 GAACAACTTGCCAGTCCCATC 59.458 52.381 0.00 0.00 30.45 3.51
3167 7398 1.133513 TGAACAACTTGCCAGTCCCAT 60.134 47.619 0.00 0.00 30.45 4.00
3168 7399 0.257328 TGAACAACTTGCCAGTCCCA 59.743 50.000 0.00 0.00 30.45 4.37
3169 7400 0.954452 CTGAACAACTTGCCAGTCCC 59.046 55.000 0.00 0.00 30.45 4.46
3170 7401 1.967319 TCTGAACAACTTGCCAGTCC 58.033 50.000 10.04 0.00 30.45 3.85
3171 7402 2.880890 ACATCTGAACAACTTGCCAGTC 59.119 45.455 10.04 0.00 30.45 3.51
3172 7403 2.880890 GACATCTGAACAACTTGCCAGT 59.119 45.455 10.04 0.00 33.11 4.00
3173 7404 3.058432 CAGACATCTGAACAACTTGCCAG 60.058 47.826 2.51 5.75 46.59 4.85
3174 7405 2.880268 CAGACATCTGAACAACTTGCCA 59.120 45.455 2.51 0.00 46.59 4.92
3175 7406 3.549299 CAGACATCTGAACAACTTGCC 57.451 47.619 2.51 0.00 46.59 4.52
3186 7417 6.093219 ACGGAGAAATCAAAATCAGACATCTG 59.907 38.462 2.24 2.24 45.08 2.90
3187 7418 6.093219 CACGGAGAAATCAAAATCAGACATCT 59.907 38.462 0.00 0.00 0.00 2.90
3188 7419 6.253746 CACGGAGAAATCAAAATCAGACATC 58.746 40.000 0.00 0.00 0.00 3.06
3189 7420 5.124457 CCACGGAGAAATCAAAATCAGACAT 59.876 40.000 0.00 0.00 0.00 3.06
3190 7421 4.455533 CCACGGAGAAATCAAAATCAGACA 59.544 41.667 0.00 0.00 0.00 3.41
3191 7422 4.455877 ACCACGGAGAAATCAAAATCAGAC 59.544 41.667 0.00 0.00 0.00 3.51
3192 7423 4.455533 CACCACGGAGAAATCAAAATCAGA 59.544 41.667 0.00 0.00 0.00 3.27
3193 7424 4.216257 ACACCACGGAGAAATCAAAATCAG 59.784 41.667 0.00 0.00 0.00 2.90
3194 7425 4.141287 ACACCACGGAGAAATCAAAATCA 58.859 39.130 0.00 0.00 0.00 2.57
3195 7426 4.766404 ACACCACGGAGAAATCAAAATC 57.234 40.909 0.00 0.00 0.00 2.17
3196 7427 5.508994 GGAAACACCACGGAGAAATCAAAAT 60.509 40.000 0.00 0.00 38.79 1.82
3197 7428 4.202070 GGAAACACCACGGAGAAATCAAAA 60.202 41.667 0.00 0.00 38.79 2.44
3198 7429 3.316868 GGAAACACCACGGAGAAATCAAA 59.683 43.478 0.00 0.00 38.79 2.69
3199 7430 2.882137 GGAAACACCACGGAGAAATCAA 59.118 45.455 0.00 0.00 38.79 2.57
3200 7431 2.500229 GGAAACACCACGGAGAAATCA 58.500 47.619 0.00 0.00 38.79 2.57
3201 7432 1.810755 GGGAAACACCACGGAGAAATC 59.189 52.381 0.00 0.00 41.20 2.17
3202 7433 1.423921 AGGGAAACACCACGGAGAAAT 59.576 47.619 0.00 0.00 41.20 2.17
3203 7434 0.841289 AGGGAAACACCACGGAGAAA 59.159 50.000 0.00 0.00 41.20 2.52
3204 7435 0.395312 GAGGGAAACACCACGGAGAA 59.605 55.000 0.00 0.00 41.20 2.87
3205 7436 1.477685 GGAGGGAAACACCACGGAGA 61.478 60.000 0.00 0.00 41.20 3.71
3206 7437 1.003718 GGAGGGAAACACCACGGAG 60.004 63.158 0.00 0.00 41.20 4.63
3207 7438 1.346479 TTGGAGGGAAACACCACGGA 61.346 55.000 0.00 0.00 41.20 4.69
3208 7439 0.466555 TTTGGAGGGAAACACCACGG 60.467 55.000 0.00 0.00 41.20 4.94
3209 7440 0.951558 CTTTGGAGGGAAACACCACG 59.048 55.000 0.00 0.00 41.20 4.94
3210 7441 2.358322 TCTTTGGAGGGAAACACCAC 57.642 50.000 0.00 0.00 41.20 4.16
3211 7442 3.230134 CATTCTTTGGAGGGAAACACCA 58.770 45.455 0.00 0.00 41.20 4.17
3212 7443 3.230976 ACATTCTTTGGAGGGAAACACC 58.769 45.455 0.00 0.00 38.08 4.16
3213 7444 4.937201 AACATTCTTTGGAGGGAAACAC 57.063 40.909 0.00 0.00 0.00 3.32
3214 7445 4.442753 GCAAACATTCTTTGGAGGGAAACA 60.443 41.667 0.00 0.00 0.00 2.83
3215 7446 4.058124 GCAAACATTCTTTGGAGGGAAAC 58.942 43.478 0.00 0.00 0.00 2.78
3216 7447 3.243704 CGCAAACATTCTTTGGAGGGAAA 60.244 43.478 0.00 0.00 0.00 3.13
3217 7448 2.295909 CGCAAACATTCTTTGGAGGGAA 59.704 45.455 0.00 0.00 0.00 3.97
3218 7449 1.885887 CGCAAACATTCTTTGGAGGGA 59.114 47.619 0.00 0.00 0.00 4.20
3219 7450 1.067635 CCGCAAACATTCTTTGGAGGG 60.068 52.381 0.00 0.00 0.00 4.30
3220 7451 1.885887 TCCGCAAACATTCTTTGGAGG 59.114 47.619 0.00 0.00 0.00 4.30
3221 7452 3.191162 TCATCCGCAAACATTCTTTGGAG 59.809 43.478 0.00 0.00 0.00 3.86
3222 7453 3.153130 TCATCCGCAAACATTCTTTGGA 58.847 40.909 0.00 0.00 0.00 3.53
3223 7454 3.574284 TCATCCGCAAACATTCTTTGG 57.426 42.857 0.00 0.00 0.00 3.28
3224 7455 4.201647 GCAATCATCCGCAAACATTCTTTG 60.202 41.667 0.00 0.00 0.00 2.77
3225 7456 3.928375 GCAATCATCCGCAAACATTCTTT 59.072 39.130 0.00 0.00 0.00 2.52
3226 7457 3.514645 GCAATCATCCGCAAACATTCTT 58.485 40.909 0.00 0.00 0.00 2.52
3227 7458 2.159198 GGCAATCATCCGCAAACATTCT 60.159 45.455 0.00 0.00 0.00 2.40
3228 7459 2.159198 AGGCAATCATCCGCAAACATTC 60.159 45.455 0.00 0.00 0.00 2.67
3229 7460 1.826720 AGGCAATCATCCGCAAACATT 59.173 42.857 0.00 0.00 0.00 2.71
3230 7461 1.406539 GAGGCAATCATCCGCAAACAT 59.593 47.619 0.00 0.00 0.00 2.71
3231 7462 0.810648 GAGGCAATCATCCGCAAACA 59.189 50.000 0.00 0.00 0.00 2.83
3232 7463 0.810648 TGAGGCAATCATCCGCAAAC 59.189 50.000 0.00 0.00 31.12 2.93
3233 7464 1.406180 CATGAGGCAATCATCCGCAAA 59.594 47.619 0.90 0.00 46.01 3.68
3234 7465 1.026584 CATGAGGCAATCATCCGCAA 58.973 50.000 0.90 0.00 46.01 4.85
3235 7466 1.449726 GCATGAGGCAATCATCCGCA 61.450 55.000 0.00 0.00 46.01 5.69
3236 7467 1.285023 GCATGAGGCAATCATCCGC 59.715 57.895 0.00 0.34 46.01 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.