Multiple sequence alignment - TraesCS2B01G202100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G202100 chr2B 100.000 2288 0 0 1 2288 181981999 181979712 0.000000e+00 4226
1 TraesCS2B01G202100 chr2B 91.994 1374 105 4 353 1725 46495378 46494009 0.000000e+00 1923
2 TraesCS2B01G202100 chr2B 84.201 557 63 16 1724 2257 90554990 90555544 3.370000e-143 518
3 TraesCS2B01G202100 chr2B 82.313 588 73 15 1725 2288 92794801 92794221 4.420000e-132 481
4 TraesCS2B01G202100 chr2B 81.572 369 38 14 1725 2069 92795608 92795246 6.230000e-71 278
5 TraesCS2B01G202100 chr2B 95.556 90 2 1 265 352 181997451 181997362 2.370000e-30 143
6 TraesCS2B01G202100 chr4D 93.551 1380 86 3 353 1731 102106559 102105182 0.000000e+00 2052
7 TraesCS2B01G202100 chr4D 82.301 339 34 11 1949 2287 507691678 507691990 1.040000e-68 270
8 TraesCS2B01G202100 chr4B 93.367 1372 89 2 353 1724 551785068 551786437 0.000000e+00 2028
9 TraesCS2B01G202100 chr4B 92.930 1372 95 2 353 1724 551730460 551731829 0.000000e+00 1995
10 TraesCS2B01G202100 chr6D 93.023 1376 91 4 353 1727 450906312 450907683 0.000000e+00 2004
11 TraesCS2B01G202100 chr7B 92.857 1372 88 7 353 1724 150842467 150843828 0.000000e+00 1982
12 TraesCS2B01G202100 chr7B 98.188 276 4 1 1 275 315102181 315102456 4.420000e-132 481
13 TraesCS2B01G202100 chr7B 98.881 268 3 0 1 268 151625780 151625513 1.590000e-131 479
14 TraesCS2B01G202100 chr7B 98.881 268 3 0 1 268 459990805 459990538 1.590000e-131 479
15 TraesCS2B01G202100 chr7B 93.617 94 4 1 265 356 162557293 162557200 3.060000e-29 139
16 TraesCS2B01G202100 chr7B 92.784 97 2 4 265 357 415419700 415419605 3.960000e-28 135
17 TraesCS2B01G202100 chr2D 92.566 1372 101 1 353 1724 469181072 469182442 0.000000e+00 1967
18 TraesCS2B01G202100 chr7D 92.274 1372 104 2 353 1724 463975474 463974105 0.000000e+00 1945
19 TraesCS2B01G202100 chr7D 92.128 1372 103 2 353 1720 107722415 107721045 0.000000e+00 1930
20 TraesCS2B01G202100 chr7D 84.237 590 64 15 1724 2288 9405735 9405150 4.300000e-152 547
21 TraesCS2B01G202100 chr7D 82.564 585 59 19 1724 2285 237417015 237417579 2.060000e-130 475
22 TraesCS2B01G202100 chr5D 85.714 588 54 18 1724 2287 502709944 502709363 5.440000e-166 593
23 TraesCS2B01G202100 chr3B 99.254 268 2 0 1 268 246587841 246587574 3.420000e-133 484
24 TraesCS2B01G202100 chr3B 98.881 268 3 0 1 268 162548411 162548144 1.590000e-131 479
25 TraesCS2B01G202100 chr3B 98.168 273 4 1 4 275 404068974 404068702 2.060000e-130 475
26 TraesCS2B01G202100 chr3B 81.757 592 77 24 1724 2288 807576293 807576880 1.240000e-127 466
27 TraesCS2B01G202100 chr6B 99.245 265 2 0 1 265 481548108 481548372 1.590000e-131 479
28 TraesCS2B01G202100 chr6B 95.506 89 3 1 265 352 170614698 170614786 8.520000e-30 141
29 TraesCS2B01G202100 chr6B 94.565 92 3 1 265 354 484957998 484957907 8.520000e-30 141
30 TraesCS2B01G202100 chr5B 98.881 268 3 0 1 268 260989641 260989374 1.590000e-131 479
31 TraesCS2B01G202100 chr5B 94.505 91 3 1 265 353 316746839 316746929 3.060000e-29 139
32 TraesCS2B01G202100 chr5B 94.505 91 3 1 265 353 575215940 575216030 3.060000e-29 139
33 TraesCS2B01G202100 chr5A 99.245 265 2 0 1 265 504366192 504366456 1.590000e-131 479
34 TraesCS2B01G202100 chr1A 83.851 483 52 16 1729 2187 545766097 545765617 9.710000e-119 436
35 TraesCS2B01G202100 chr1B 94.505 91 3 1 265 353 391781657 391781747 3.060000e-29 139
36 TraesCS2B01G202100 chr1B 90.566 106 4 5 265 365 223432739 223432843 3.960000e-28 135


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G202100 chr2B 181979712 181981999 2287 True 4226.0 4226 100.0000 1 2288 1 chr2B.!!$R2 2287
1 TraesCS2B01G202100 chr2B 46494009 46495378 1369 True 1923.0 1923 91.9940 353 1725 1 chr2B.!!$R1 1372
2 TraesCS2B01G202100 chr2B 90554990 90555544 554 False 518.0 518 84.2010 1724 2257 1 chr2B.!!$F1 533
3 TraesCS2B01G202100 chr2B 92794221 92795608 1387 True 379.5 481 81.9425 1725 2288 2 chr2B.!!$R4 563
4 TraesCS2B01G202100 chr4D 102105182 102106559 1377 True 2052.0 2052 93.5510 353 1731 1 chr4D.!!$R1 1378
5 TraesCS2B01G202100 chr4B 551785068 551786437 1369 False 2028.0 2028 93.3670 353 1724 1 chr4B.!!$F2 1371
6 TraesCS2B01G202100 chr4B 551730460 551731829 1369 False 1995.0 1995 92.9300 353 1724 1 chr4B.!!$F1 1371
7 TraesCS2B01G202100 chr6D 450906312 450907683 1371 False 2004.0 2004 93.0230 353 1727 1 chr6D.!!$F1 1374
8 TraesCS2B01G202100 chr7B 150842467 150843828 1361 False 1982.0 1982 92.8570 353 1724 1 chr7B.!!$F1 1371
9 TraesCS2B01G202100 chr2D 469181072 469182442 1370 False 1967.0 1967 92.5660 353 1724 1 chr2D.!!$F1 1371
10 TraesCS2B01G202100 chr7D 463974105 463975474 1369 True 1945.0 1945 92.2740 353 1724 1 chr7D.!!$R3 1371
11 TraesCS2B01G202100 chr7D 107721045 107722415 1370 True 1930.0 1930 92.1280 353 1720 1 chr7D.!!$R2 1367
12 TraesCS2B01G202100 chr7D 9405150 9405735 585 True 547.0 547 84.2370 1724 2288 1 chr7D.!!$R1 564
13 TraesCS2B01G202100 chr7D 237417015 237417579 564 False 475.0 475 82.5640 1724 2285 1 chr7D.!!$F1 561
14 TraesCS2B01G202100 chr5D 502709363 502709944 581 True 593.0 593 85.7140 1724 2287 1 chr5D.!!$R1 563
15 TraesCS2B01G202100 chr3B 807576293 807576880 587 False 466.0 466 81.7570 1724 2288 1 chr3B.!!$F1 564

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
333 334 0.032416 TACAGCCCCCTCTAGACACC 60.032 60.0 0.0 0.0 0.0 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1571 1580 0.179018 GGACTGAACCACACTGCCTT 60.179 55.0 0.0 0.0 0.0 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.224762 GAGGCTATATATACCCCTCCACC 58.775 52.174 16.95 1.86 36.85 4.61
25 26 3.871598 AGGCTATATATACCCCTCCACCT 59.128 47.826 1.06 0.00 0.00 4.00
26 27 4.078513 AGGCTATATATACCCCTCCACCTC 60.079 50.000 1.06 0.00 0.00 3.85
27 28 4.224762 GCTATATATACCCCTCCACCTCC 58.775 52.174 0.00 0.00 0.00 4.30
28 29 4.078513 GCTATATATACCCCTCCACCTCCT 60.079 50.000 0.00 0.00 0.00 3.69
29 30 4.628661 ATATATACCCCTCCACCTCCTC 57.371 50.000 0.00 0.00 0.00 3.71
30 31 1.937098 TATACCCCTCCACCTCCTCT 58.063 55.000 0.00 0.00 0.00 3.69
31 32 1.027815 ATACCCCTCCACCTCCTCTT 58.972 55.000 0.00 0.00 0.00 2.85
32 33 0.338814 TACCCCTCCACCTCCTCTTC 59.661 60.000 0.00 0.00 0.00 2.87
33 34 1.081092 CCCCTCCACCTCCTCTTCA 59.919 63.158 0.00 0.00 0.00 3.02
34 35 0.327000 CCCCTCCACCTCCTCTTCAT 60.327 60.000 0.00 0.00 0.00 2.57
35 36 1.589414 CCCTCCACCTCCTCTTCATT 58.411 55.000 0.00 0.00 0.00 2.57
36 37 1.488393 CCCTCCACCTCCTCTTCATTC 59.512 57.143 0.00 0.00 0.00 2.67
37 38 1.137872 CCTCCACCTCCTCTTCATTCG 59.862 57.143 0.00 0.00 0.00 3.34
38 39 1.827969 CTCCACCTCCTCTTCATTCGT 59.172 52.381 0.00 0.00 0.00 3.85
39 40 1.550524 TCCACCTCCTCTTCATTCGTG 59.449 52.381 0.00 0.00 0.00 4.35
40 41 1.406069 CCACCTCCTCTTCATTCGTGG 60.406 57.143 0.00 0.00 33.91 4.94
41 42 1.550524 CACCTCCTCTTCATTCGTGGA 59.449 52.381 0.00 0.00 0.00 4.02
42 43 1.827969 ACCTCCTCTTCATTCGTGGAG 59.172 52.381 0.00 0.00 42.72 3.86
43 44 2.103373 CCTCCTCTTCATTCGTGGAGA 58.897 52.381 8.70 0.00 45.07 3.71
44 45 2.100584 CCTCCTCTTCATTCGTGGAGAG 59.899 54.545 8.70 6.74 45.07 3.20
45 46 3.020274 CTCCTCTTCATTCGTGGAGAGA 58.980 50.000 13.94 1.89 45.07 3.10
46 47 3.020274 TCCTCTTCATTCGTGGAGAGAG 58.980 50.000 13.94 6.84 0.00 3.20
47 48 2.481104 CCTCTTCATTCGTGGAGAGAGC 60.481 54.545 13.94 0.00 0.00 4.09
48 49 1.478510 TCTTCATTCGTGGAGAGAGCC 59.521 52.381 0.00 0.00 0.00 4.70
49 50 1.205655 CTTCATTCGTGGAGAGAGCCA 59.794 52.381 0.00 0.00 35.02 4.75
50 51 1.489481 TCATTCGTGGAGAGAGCCAT 58.511 50.000 0.00 0.00 40.68 4.40
51 52 1.410517 TCATTCGTGGAGAGAGCCATC 59.589 52.381 0.00 0.00 40.68 3.51
52 53 1.137675 CATTCGTGGAGAGAGCCATCA 59.862 52.381 0.00 0.00 40.68 3.07
53 54 0.820226 TTCGTGGAGAGAGCCATCAG 59.180 55.000 0.00 0.00 40.68 2.90
54 55 0.034089 TCGTGGAGAGAGCCATCAGA 60.034 55.000 0.00 0.00 40.68 3.27
55 56 0.102120 CGTGGAGAGAGCCATCAGAC 59.898 60.000 0.00 0.00 40.68 3.51
56 57 1.484038 GTGGAGAGAGCCATCAGACT 58.516 55.000 0.00 0.00 40.68 3.24
57 58 1.136695 GTGGAGAGAGCCATCAGACTG 59.863 57.143 0.00 0.00 40.68 3.51
58 59 1.006400 TGGAGAGAGCCATCAGACTGA 59.994 52.381 7.80 7.80 31.66 3.41
59 60 2.106566 GGAGAGAGCCATCAGACTGAA 58.893 52.381 9.70 0.00 0.00 3.02
60 61 2.159114 GGAGAGAGCCATCAGACTGAAC 60.159 54.545 9.70 2.37 0.00 3.18
61 62 1.830477 AGAGAGCCATCAGACTGAACC 59.170 52.381 9.70 0.91 0.00 3.62
62 63 1.830477 GAGAGCCATCAGACTGAACCT 59.170 52.381 9.70 5.95 0.00 3.50
63 64 3.027412 GAGAGCCATCAGACTGAACCTA 58.973 50.000 9.70 0.00 0.00 3.08
64 65 2.763448 AGAGCCATCAGACTGAACCTAC 59.237 50.000 9.70 2.12 0.00 3.18
65 66 2.497675 GAGCCATCAGACTGAACCTACA 59.502 50.000 9.70 0.00 0.00 2.74
66 67 2.234908 AGCCATCAGACTGAACCTACAC 59.765 50.000 9.70 0.00 0.00 2.90
67 68 2.234908 GCCATCAGACTGAACCTACACT 59.765 50.000 9.70 0.00 0.00 3.55
68 69 3.307059 GCCATCAGACTGAACCTACACTT 60.307 47.826 9.70 0.00 0.00 3.16
69 70 4.499183 CCATCAGACTGAACCTACACTTC 58.501 47.826 9.70 0.00 0.00 3.01
70 71 4.499183 CATCAGACTGAACCTACACTTCC 58.501 47.826 9.70 0.00 0.00 3.46
71 72 3.572642 TCAGACTGAACCTACACTTCCA 58.427 45.455 1.64 0.00 0.00 3.53
72 73 3.964688 TCAGACTGAACCTACACTTCCAA 59.035 43.478 1.64 0.00 0.00 3.53
73 74 4.058817 CAGACTGAACCTACACTTCCAAC 58.941 47.826 0.00 0.00 0.00 3.77
74 75 3.709653 AGACTGAACCTACACTTCCAACA 59.290 43.478 0.00 0.00 0.00 3.33
75 76 4.348168 AGACTGAACCTACACTTCCAACAT 59.652 41.667 0.00 0.00 0.00 2.71
76 77 5.542635 AGACTGAACCTACACTTCCAACATA 59.457 40.000 0.00 0.00 0.00 2.29
77 78 5.548406 ACTGAACCTACACTTCCAACATAC 58.452 41.667 0.00 0.00 0.00 2.39
78 79 5.071250 ACTGAACCTACACTTCCAACATACA 59.929 40.000 0.00 0.00 0.00 2.29
79 80 6.121776 TGAACCTACACTTCCAACATACAT 57.878 37.500 0.00 0.00 0.00 2.29
80 81 6.539173 TGAACCTACACTTCCAACATACATT 58.461 36.000 0.00 0.00 0.00 2.71
81 82 7.001674 TGAACCTACACTTCCAACATACATTT 58.998 34.615 0.00 0.00 0.00 2.32
82 83 7.504238 TGAACCTACACTTCCAACATACATTTT 59.496 33.333 0.00 0.00 0.00 1.82
83 84 7.448748 ACCTACACTTCCAACATACATTTTC 57.551 36.000 0.00 0.00 0.00 2.29
84 85 7.231467 ACCTACACTTCCAACATACATTTTCT 58.769 34.615 0.00 0.00 0.00 2.52
85 86 7.174946 ACCTACACTTCCAACATACATTTTCTG 59.825 37.037 0.00 0.00 0.00 3.02
86 87 7.390440 CCTACACTTCCAACATACATTTTCTGA 59.610 37.037 0.00 0.00 0.00 3.27
87 88 7.206981 ACACTTCCAACATACATTTTCTGAG 57.793 36.000 0.00 0.00 0.00 3.35
88 89 6.998074 ACACTTCCAACATACATTTTCTGAGA 59.002 34.615 0.00 0.00 0.00 3.27
89 90 7.173907 ACACTTCCAACATACATTTTCTGAGAG 59.826 37.037 0.00 0.00 0.00 3.20
90 91 7.388776 CACTTCCAACATACATTTTCTGAGAGA 59.611 37.037 0.00 0.00 0.00 3.10
91 92 7.605691 ACTTCCAACATACATTTTCTGAGAGAG 59.394 37.037 0.00 0.00 0.00 3.20
92 93 7.244886 TCCAACATACATTTTCTGAGAGAGA 57.755 36.000 0.00 0.00 0.00 3.10
93 94 7.679783 TCCAACATACATTTTCTGAGAGAGAA 58.320 34.615 0.00 0.00 39.05 2.87
94 95 7.604164 TCCAACATACATTTTCTGAGAGAGAAC 59.396 37.037 0.00 0.00 40.60 3.01
95 96 7.605691 CCAACATACATTTTCTGAGAGAGAACT 59.394 37.037 0.00 0.00 40.60 3.01
96 97 9.645059 CAACATACATTTTCTGAGAGAGAACTA 57.355 33.333 0.00 0.00 40.60 2.24
97 98 9.646427 AACATACATTTTCTGAGAGAGAACTAC 57.354 33.333 0.00 0.00 40.60 2.73
98 99 8.254508 ACATACATTTTCTGAGAGAGAACTACC 58.745 37.037 0.00 0.00 40.60 3.18
99 100 6.926630 ACATTTTCTGAGAGAGAACTACCT 57.073 37.500 0.00 0.00 40.60 3.08
100 101 9.702253 ATACATTTTCTGAGAGAGAACTACCTA 57.298 33.333 0.00 0.00 40.60 3.08
101 102 7.832769 ACATTTTCTGAGAGAGAACTACCTAC 58.167 38.462 0.00 0.00 40.60 3.18
102 103 7.672239 ACATTTTCTGAGAGAGAACTACCTACT 59.328 37.037 0.00 0.00 40.60 2.57
103 104 7.690952 TTTTCTGAGAGAGAACTACCTACTC 57.309 40.000 0.00 0.00 40.60 2.59
104 105 6.375830 TTCTGAGAGAGAACTACCTACTCA 57.624 41.667 0.00 0.00 35.64 3.41
105 106 6.569127 TCTGAGAGAGAACTACCTACTCAT 57.431 41.667 0.00 0.00 33.06 2.90
106 107 6.353323 TCTGAGAGAGAACTACCTACTCATG 58.647 44.000 0.00 0.00 33.06 3.07
107 108 6.068461 TGAGAGAGAACTACCTACTCATGT 57.932 41.667 0.00 0.00 33.69 3.21
108 109 5.883115 TGAGAGAGAACTACCTACTCATGTG 59.117 44.000 0.00 0.00 33.69 3.21
109 110 5.822204 AGAGAGAACTACCTACTCATGTGT 58.178 41.667 5.63 5.63 33.69 3.72
110 111 6.249951 AGAGAGAACTACCTACTCATGTGTT 58.750 40.000 5.63 0.00 33.69 3.32
111 112 6.151985 AGAGAGAACTACCTACTCATGTGTTG 59.848 42.308 5.63 4.08 33.69 3.33
112 113 6.010850 AGAGAACTACCTACTCATGTGTTGA 58.989 40.000 5.63 0.00 33.69 3.18
125 126 7.418840 CTCATGTGTTGAGGCTAAGATATTC 57.581 40.000 0.00 0.00 46.89 1.75
126 127 6.291377 TCATGTGTTGAGGCTAAGATATTCC 58.709 40.000 0.00 0.00 0.00 3.01
127 128 5.692115 TGTGTTGAGGCTAAGATATTCCA 57.308 39.130 0.00 0.00 0.00 3.53
128 129 6.252599 TGTGTTGAGGCTAAGATATTCCAT 57.747 37.500 0.00 0.00 0.00 3.41
129 130 6.662755 TGTGTTGAGGCTAAGATATTCCATT 58.337 36.000 0.00 0.00 0.00 3.16
130 131 6.767902 TGTGTTGAGGCTAAGATATTCCATTC 59.232 38.462 0.00 0.00 0.00 2.67
131 132 6.205658 GTGTTGAGGCTAAGATATTCCATTCC 59.794 42.308 0.00 0.00 0.00 3.01
132 133 6.101734 TGTTGAGGCTAAGATATTCCATTCCT 59.898 38.462 0.00 0.00 0.00 3.36
133 134 7.292356 TGTTGAGGCTAAGATATTCCATTCCTA 59.708 37.037 0.00 0.00 0.00 2.94
134 135 7.246171 TGAGGCTAAGATATTCCATTCCTAC 57.754 40.000 0.00 0.00 0.00 3.18
135 136 6.213600 TGAGGCTAAGATATTCCATTCCTACC 59.786 42.308 0.00 0.00 0.00 3.18
136 137 6.091555 AGGCTAAGATATTCCATTCCTACCA 58.908 40.000 0.00 0.00 0.00 3.25
137 138 6.737608 AGGCTAAGATATTCCATTCCTACCAT 59.262 38.462 0.00 0.00 0.00 3.55
138 139 7.906736 AGGCTAAGATATTCCATTCCTACCATA 59.093 37.037 0.00 0.00 0.00 2.74
139 140 8.718656 GGCTAAGATATTCCATTCCTACCATAT 58.281 37.037 0.00 0.00 0.00 1.78
140 141 9.553064 GCTAAGATATTCCATTCCTACCATATG 57.447 37.037 0.00 0.00 0.00 1.78
147 148 8.874744 ATTCCATTCCTACCATATGAATCTTG 57.125 34.615 3.65 0.00 0.00 3.02
148 149 7.631510 TCCATTCCTACCATATGAATCTTGA 57.368 36.000 3.65 0.00 0.00 3.02
149 150 8.223378 TCCATTCCTACCATATGAATCTTGAT 57.777 34.615 3.65 0.00 0.00 2.57
150 151 8.324306 TCCATTCCTACCATATGAATCTTGATC 58.676 37.037 3.65 0.00 0.00 2.92
151 152 8.327271 CCATTCCTACCATATGAATCTTGATCT 58.673 37.037 3.65 0.00 0.00 2.75
152 153 9.381033 CATTCCTACCATATGAATCTTGATCTC 57.619 37.037 3.65 0.00 0.00 2.75
153 154 8.733092 TTCCTACCATATGAATCTTGATCTCT 57.267 34.615 3.65 0.00 0.00 3.10
154 155 9.828691 TTCCTACCATATGAATCTTGATCTCTA 57.171 33.333 3.65 0.00 0.00 2.43
155 156 9.473007 TCCTACCATATGAATCTTGATCTCTAG 57.527 37.037 3.65 0.00 0.00 2.43
156 157 8.196771 CCTACCATATGAATCTTGATCTCTAGC 58.803 40.741 3.65 0.00 0.00 3.42
157 158 6.945218 ACCATATGAATCTTGATCTCTAGCC 58.055 40.000 3.65 0.00 0.00 3.93
158 159 6.730038 ACCATATGAATCTTGATCTCTAGCCT 59.270 38.462 3.65 0.00 0.00 4.58
159 160 7.237263 ACCATATGAATCTTGATCTCTAGCCTT 59.763 37.037 3.65 0.00 0.00 4.35
160 161 7.765360 CCATATGAATCTTGATCTCTAGCCTTC 59.235 40.741 3.65 0.00 0.00 3.46
161 162 5.543507 TGAATCTTGATCTCTAGCCTTCC 57.456 43.478 0.00 0.00 0.00 3.46
162 163 4.346418 TGAATCTTGATCTCTAGCCTTCCC 59.654 45.833 0.00 0.00 0.00 3.97
163 164 2.683768 TCTTGATCTCTAGCCTTCCCC 58.316 52.381 0.00 0.00 0.00 4.81
164 165 2.023015 TCTTGATCTCTAGCCTTCCCCA 60.023 50.000 0.00 0.00 0.00 4.96
165 166 2.568546 TGATCTCTAGCCTTCCCCAA 57.431 50.000 0.00 0.00 0.00 4.12
166 167 2.402564 TGATCTCTAGCCTTCCCCAAG 58.597 52.381 0.00 0.00 0.00 3.61
167 168 2.293184 TGATCTCTAGCCTTCCCCAAGT 60.293 50.000 0.00 0.00 0.00 3.16
168 169 2.344093 TCTCTAGCCTTCCCCAAGTT 57.656 50.000 0.00 0.00 0.00 2.66
169 170 1.909302 TCTCTAGCCTTCCCCAAGTTG 59.091 52.381 0.00 0.00 0.00 3.16
170 171 0.328258 TCTAGCCTTCCCCAAGTTGC 59.672 55.000 0.00 0.00 0.00 4.17
171 172 0.329596 CTAGCCTTCCCCAAGTTGCT 59.670 55.000 0.00 0.00 33.28 3.91
172 173 0.777446 TAGCCTTCCCCAAGTTGCTT 59.223 50.000 0.00 0.00 31.67 3.91
173 174 0.105504 AGCCTTCCCCAAGTTGCTTT 60.106 50.000 0.00 0.00 0.00 3.51
174 175 0.318441 GCCTTCCCCAAGTTGCTTTC 59.682 55.000 0.00 0.00 0.00 2.62
175 176 0.969149 CCTTCCCCAAGTTGCTTTCC 59.031 55.000 0.00 0.00 0.00 3.13
176 177 1.703411 CTTCCCCAAGTTGCTTTCCA 58.297 50.000 0.00 0.00 0.00 3.53
177 178 1.341209 CTTCCCCAAGTTGCTTTCCAC 59.659 52.381 0.00 0.00 0.00 4.02
178 179 0.555769 TCCCCAAGTTGCTTTCCACT 59.444 50.000 0.00 0.00 0.00 4.00
179 180 0.961753 CCCCAAGTTGCTTTCCACTC 59.038 55.000 0.00 0.00 0.00 3.51
180 181 1.691196 CCCAAGTTGCTTTCCACTCA 58.309 50.000 0.00 0.00 0.00 3.41
181 182 2.031120 CCCAAGTTGCTTTCCACTCAA 58.969 47.619 0.00 0.00 0.00 3.02
182 183 2.430332 CCCAAGTTGCTTTCCACTCAAA 59.570 45.455 0.00 0.00 0.00 2.69
183 184 3.070015 CCCAAGTTGCTTTCCACTCAAAT 59.930 43.478 0.00 0.00 0.00 2.32
184 185 4.301628 CCAAGTTGCTTTCCACTCAAATC 58.698 43.478 0.00 0.00 0.00 2.17
185 186 4.038402 CCAAGTTGCTTTCCACTCAAATCT 59.962 41.667 0.00 0.00 0.00 2.40
186 187 5.452356 CCAAGTTGCTTTCCACTCAAATCTT 60.452 40.000 0.00 0.00 0.00 2.40
187 188 5.444663 AGTTGCTTTCCACTCAAATCTTC 57.555 39.130 0.00 0.00 0.00 2.87
188 189 5.136105 AGTTGCTTTCCACTCAAATCTTCT 58.864 37.500 0.00 0.00 0.00 2.85
189 190 5.595952 AGTTGCTTTCCACTCAAATCTTCTT 59.404 36.000 0.00 0.00 0.00 2.52
190 191 6.097412 AGTTGCTTTCCACTCAAATCTTCTTT 59.903 34.615 0.00 0.00 0.00 2.52
191 192 6.076981 TGCTTTCCACTCAAATCTTCTTTC 57.923 37.500 0.00 0.00 0.00 2.62
192 193 5.010012 TGCTTTCCACTCAAATCTTCTTTCC 59.990 40.000 0.00 0.00 0.00 3.13
193 194 5.010012 GCTTTCCACTCAAATCTTCTTTCCA 59.990 40.000 0.00 0.00 0.00 3.53
194 195 6.391227 TTTCCACTCAAATCTTCTTTCCAC 57.609 37.500 0.00 0.00 0.00 4.02
195 196 4.398319 TCCACTCAAATCTTCTTTCCACC 58.602 43.478 0.00 0.00 0.00 4.61
196 197 4.141274 TCCACTCAAATCTTCTTTCCACCA 60.141 41.667 0.00 0.00 0.00 4.17
197 198 4.217118 CCACTCAAATCTTCTTTCCACCAG 59.783 45.833 0.00 0.00 0.00 4.00
198 199 5.065914 CACTCAAATCTTCTTTCCACCAGA 58.934 41.667 0.00 0.00 0.00 3.86
199 200 5.709164 CACTCAAATCTTCTTTCCACCAGAT 59.291 40.000 0.00 0.00 0.00 2.90
200 201 5.942826 ACTCAAATCTTCTTTCCACCAGATC 59.057 40.000 0.00 0.00 0.00 2.75
201 202 5.256474 TCAAATCTTCTTTCCACCAGATCC 58.744 41.667 0.00 0.00 0.00 3.36
202 203 4.934797 AATCTTCTTTCCACCAGATCCA 57.065 40.909 0.00 0.00 0.00 3.41
203 204 4.934797 ATCTTCTTTCCACCAGATCCAA 57.065 40.909 0.00 0.00 0.00 3.53
204 205 4.722526 TCTTCTTTCCACCAGATCCAAA 57.277 40.909 0.00 0.00 0.00 3.28
205 206 5.261040 TCTTCTTTCCACCAGATCCAAAT 57.739 39.130 0.00 0.00 0.00 2.32
206 207 5.256474 TCTTCTTTCCACCAGATCCAAATC 58.744 41.667 0.00 0.00 0.00 2.17
207 208 3.968265 TCTTTCCACCAGATCCAAATCC 58.032 45.455 0.00 0.00 31.78 3.01
208 209 3.593328 TCTTTCCACCAGATCCAAATCCT 59.407 43.478 0.00 0.00 31.78 3.24
209 210 4.788075 TCTTTCCACCAGATCCAAATCCTA 59.212 41.667 0.00 0.00 31.78 2.94
210 211 5.433051 TCTTTCCACCAGATCCAAATCCTAT 59.567 40.000 0.00 0.00 31.78 2.57
211 212 4.712051 TCCACCAGATCCAAATCCTATG 57.288 45.455 0.00 0.00 31.78 2.23
212 213 4.306391 TCCACCAGATCCAAATCCTATGA 58.694 43.478 0.00 0.00 31.78 2.15
213 214 4.349048 TCCACCAGATCCAAATCCTATGAG 59.651 45.833 0.00 0.00 31.78 2.90
214 215 4.349048 CCACCAGATCCAAATCCTATGAGA 59.651 45.833 0.00 0.00 31.78 3.27
215 216 5.512749 CCACCAGATCCAAATCCTATGAGAG 60.513 48.000 0.00 0.00 31.78 3.20
216 217 5.306419 CACCAGATCCAAATCCTATGAGAGA 59.694 44.000 0.00 0.00 31.78 3.10
217 218 5.543405 ACCAGATCCAAATCCTATGAGAGAG 59.457 44.000 0.00 0.00 31.78 3.20
218 219 5.779260 CCAGATCCAAATCCTATGAGAGAGA 59.221 44.000 0.00 0.00 31.78 3.10
219 220 6.071221 CCAGATCCAAATCCTATGAGAGAGAG 60.071 46.154 0.00 0.00 31.78 3.20
220 221 6.494491 CAGATCCAAATCCTATGAGAGAGAGT 59.506 42.308 0.00 0.00 31.78 3.24
221 222 7.015487 CAGATCCAAATCCTATGAGAGAGAGTT 59.985 40.741 0.00 0.00 31.78 3.01
222 223 6.477053 TCCAAATCCTATGAGAGAGAGTTG 57.523 41.667 0.00 0.00 33.69 3.16
223 224 6.197903 TCCAAATCCTATGAGAGAGAGTTGA 58.802 40.000 7.12 0.00 34.80 3.18
224 225 6.323482 TCCAAATCCTATGAGAGAGAGTTGAG 59.677 42.308 7.12 0.70 34.80 3.02
225 226 6.098124 CCAAATCCTATGAGAGAGAGTTGAGT 59.902 42.308 7.12 0.00 34.80 3.41
226 227 6.713762 AATCCTATGAGAGAGAGTTGAGTG 57.286 41.667 0.00 0.00 0.00 3.51
227 228 5.186256 TCCTATGAGAGAGAGTTGAGTGT 57.814 43.478 0.00 0.00 0.00 3.55
228 229 5.575157 TCCTATGAGAGAGAGTTGAGTGTT 58.425 41.667 0.00 0.00 0.00 3.32
229 230 5.417266 TCCTATGAGAGAGAGTTGAGTGTTG 59.583 44.000 0.00 0.00 0.00 3.33
230 231 4.533919 ATGAGAGAGAGTTGAGTGTTGG 57.466 45.455 0.00 0.00 0.00 3.77
231 232 2.630098 TGAGAGAGAGTTGAGTGTTGGG 59.370 50.000 0.00 0.00 0.00 4.12
232 233 1.974236 AGAGAGAGTTGAGTGTTGGGG 59.026 52.381 0.00 0.00 0.00 4.96
233 234 1.971357 GAGAGAGTTGAGTGTTGGGGA 59.029 52.381 0.00 0.00 0.00 4.81
234 235 1.974236 AGAGAGTTGAGTGTTGGGGAG 59.026 52.381 0.00 0.00 0.00 4.30
235 236 1.971357 GAGAGTTGAGTGTTGGGGAGA 59.029 52.381 0.00 0.00 0.00 3.71
236 237 1.694696 AGAGTTGAGTGTTGGGGAGAC 59.305 52.381 0.00 0.00 0.00 3.36
237 238 1.694696 GAGTTGAGTGTTGGGGAGACT 59.305 52.381 0.00 0.00 33.97 3.24
238 239 2.897969 GAGTTGAGTGTTGGGGAGACTA 59.102 50.000 0.00 0.00 30.90 2.59
239 240 3.515901 GAGTTGAGTGTTGGGGAGACTAT 59.484 47.826 0.00 0.00 30.90 2.12
240 241 3.515901 AGTTGAGTGTTGGGGAGACTATC 59.484 47.826 0.00 0.00 30.90 2.08
241 242 3.184382 TGAGTGTTGGGGAGACTATCA 57.816 47.619 0.00 0.00 30.90 2.15
242 243 3.724478 TGAGTGTTGGGGAGACTATCAT 58.276 45.455 0.00 0.00 30.90 2.45
243 244 4.104086 TGAGTGTTGGGGAGACTATCATT 58.896 43.478 0.00 0.00 30.90 2.57
244 245 4.536090 TGAGTGTTGGGGAGACTATCATTT 59.464 41.667 0.00 0.00 30.90 2.32
245 246 4.848357 AGTGTTGGGGAGACTATCATTTG 58.152 43.478 0.00 0.00 28.51 2.32
246 247 4.536090 AGTGTTGGGGAGACTATCATTTGA 59.464 41.667 0.00 0.00 28.51 2.69
247 248 5.014123 AGTGTTGGGGAGACTATCATTTGAA 59.986 40.000 0.00 0.00 28.51 2.69
248 249 5.355350 GTGTTGGGGAGACTATCATTTGAAG 59.645 44.000 0.00 0.00 0.00 3.02
249 250 4.156455 TGGGGAGACTATCATTTGAAGC 57.844 45.455 0.00 0.00 0.00 3.86
250 251 3.523157 TGGGGAGACTATCATTTGAAGCA 59.477 43.478 0.00 0.00 0.00 3.91
251 252 3.879892 GGGGAGACTATCATTTGAAGCAC 59.120 47.826 0.00 0.00 0.00 4.40
252 253 4.517285 GGGAGACTATCATTTGAAGCACA 58.483 43.478 0.00 0.00 0.00 4.57
253 254 4.943705 GGGAGACTATCATTTGAAGCACAA 59.056 41.667 0.00 0.00 36.65 3.33
254 255 5.065731 GGGAGACTATCATTTGAAGCACAAG 59.934 44.000 0.00 0.00 39.77 3.16
255 256 5.877012 GGAGACTATCATTTGAAGCACAAGA 59.123 40.000 0.00 0.00 39.77 3.02
256 257 6.036953 GGAGACTATCATTTGAAGCACAAGAG 59.963 42.308 0.00 0.00 39.77 2.85
257 258 5.353678 AGACTATCATTTGAAGCACAAGAGC 59.646 40.000 0.00 0.00 39.77 4.09
258 259 5.005740 ACTATCATTTGAAGCACAAGAGCA 58.994 37.500 0.00 0.00 39.77 4.26
259 260 4.859304 ATCATTTGAAGCACAAGAGCAA 57.141 36.364 0.00 0.00 39.77 3.91
260 261 4.233123 TCATTTGAAGCACAAGAGCAAG 57.767 40.909 0.00 0.00 39.77 4.01
261 262 3.005050 TCATTTGAAGCACAAGAGCAAGG 59.995 43.478 0.00 0.00 39.77 3.61
262 263 2.346766 TTGAAGCACAAGAGCAAGGA 57.653 45.000 0.00 0.00 36.85 3.36
263 264 1.888215 TGAAGCACAAGAGCAAGGAG 58.112 50.000 0.00 0.00 36.85 3.69
264 265 1.141657 TGAAGCACAAGAGCAAGGAGT 59.858 47.619 0.00 0.00 36.85 3.85
265 266 1.803555 GAAGCACAAGAGCAAGGAGTC 59.196 52.381 0.00 0.00 36.85 3.36
266 267 0.036022 AGCACAAGAGCAAGGAGTCC 59.964 55.000 0.00 0.00 36.85 3.85
267 268 0.250467 GCACAAGAGCAAGGAGTCCA 60.250 55.000 12.86 0.00 0.00 4.02
268 269 1.517242 CACAAGAGCAAGGAGTCCAC 58.483 55.000 12.86 0.00 0.00 4.02
269 270 1.071385 CACAAGAGCAAGGAGTCCACT 59.929 52.381 12.86 5.45 0.00 4.00
270 271 1.771255 ACAAGAGCAAGGAGTCCACTT 59.229 47.619 12.86 5.93 0.00 3.16
271 272 2.972713 ACAAGAGCAAGGAGTCCACTTA 59.027 45.455 12.86 0.00 0.00 2.24
272 273 3.391296 ACAAGAGCAAGGAGTCCACTTAA 59.609 43.478 12.86 0.00 0.00 1.85
273 274 4.141482 ACAAGAGCAAGGAGTCCACTTAAA 60.141 41.667 12.86 0.00 0.00 1.52
274 275 4.009370 AGAGCAAGGAGTCCACTTAAAC 57.991 45.455 12.86 0.00 0.00 2.01
275 276 3.648545 AGAGCAAGGAGTCCACTTAAACT 59.351 43.478 12.86 0.00 0.00 2.66
276 277 4.103311 AGAGCAAGGAGTCCACTTAAACTT 59.897 41.667 12.86 0.00 0.00 2.66
277 278 5.307196 AGAGCAAGGAGTCCACTTAAACTTA 59.693 40.000 12.86 0.00 0.00 2.24
278 279 5.937111 AGCAAGGAGTCCACTTAAACTTAA 58.063 37.500 12.86 0.00 0.00 1.85
279 280 6.362248 AGCAAGGAGTCCACTTAAACTTAAA 58.638 36.000 12.86 0.00 0.00 1.52
280 281 6.486993 AGCAAGGAGTCCACTTAAACTTAAAG 59.513 38.462 12.86 0.00 0.00 1.85
281 282 6.485648 GCAAGGAGTCCACTTAAACTTAAAGA 59.514 38.462 12.86 0.00 0.00 2.52
282 283 7.012989 GCAAGGAGTCCACTTAAACTTAAAGAA 59.987 37.037 12.86 0.00 0.00 2.52
283 284 8.343366 CAAGGAGTCCACTTAAACTTAAAGAAC 58.657 37.037 12.86 0.00 0.00 3.01
284 285 6.996879 AGGAGTCCACTTAAACTTAAAGAACC 59.003 38.462 12.86 0.00 0.00 3.62
285 286 6.996879 GGAGTCCACTTAAACTTAAAGAACCT 59.003 38.462 3.60 0.00 0.00 3.50
286 287 8.152898 GGAGTCCACTTAAACTTAAAGAACCTA 58.847 37.037 3.60 0.00 0.00 3.08
287 288 9.551734 GAGTCCACTTAAACTTAAAGAACCTAA 57.448 33.333 0.00 0.00 0.00 2.69
288 289 9.910267 AGTCCACTTAAACTTAAAGAACCTAAA 57.090 29.630 0.00 0.00 0.00 1.85
297 298 8.697846 AACTTAAAGAACCTAAAAACTGCAAC 57.302 30.769 0.00 0.00 0.00 4.17
298 299 8.063200 ACTTAAAGAACCTAAAAACTGCAACT 57.937 30.769 0.00 0.00 0.00 3.16
299 300 8.528643 ACTTAAAGAACCTAAAAACTGCAACTT 58.471 29.630 0.00 0.00 0.00 2.66
300 301 9.366216 CTTAAAGAACCTAAAAACTGCAACTTT 57.634 29.630 0.00 0.00 0.00 2.66
301 302 7.595311 AAAGAACCTAAAAACTGCAACTTTG 57.405 32.000 0.00 0.00 0.00 2.77
302 303 6.524101 AGAACCTAAAAACTGCAACTTTGA 57.476 33.333 0.00 0.00 0.00 2.69
303 304 7.112452 AGAACCTAAAAACTGCAACTTTGAT 57.888 32.000 0.00 0.00 0.00 2.57
304 305 8.232913 AGAACCTAAAAACTGCAACTTTGATA 57.767 30.769 0.00 0.00 0.00 2.15
305 306 8.135529 AGAACCTAAAAACTGCAACTTTGATAC 58.864 33.333 0.00 0.00 0.00 2.24
306 307 7.582667 ACCTAAAAACTGCAACTTTGATACT 57.417 32.000 0.00 0.00 0.00 2.12
307 308 8.007405 ACCTAAAAACTGCAACTTTGATACTT 57.993 30.769 0.00 0.00 0.00 2.24
308 309 9.127277 ACCTAAAAACTGCAACTTTGATACTTA 57.873 29.630 0.00 0.00 0.00 2.24
309 310 9.612620 CCTAAAAACTGCAACTTTGATACTTAG 57.387 33.333 0.00 0.00 0.00 2.18
311 312 8.856490 AAAAACTGCAACTTTGATACTTAGTG 57.144 30.769 0.00 0.00 0.00 2.74
312 313 7.568199 AAACTGCAACTTTGATACTTAGTGT 57.432 32.000 0.00 0.00 0.00 3.55
313 314 6.787085 ACTGCAACTTTGATACTTAGTGTC 57.213 37.500 2.05 2.05 0.00 3.67
314 315 6.525629 ACTGCAACTTTGATACTTAGTGTCT 58.474 36.000 10.31 0.00 0.00 3.41
315 316 7.667557 ACTGCAACTTTGATACTTAGTGTCTA 58.332 34.615 10.31 0.08 0.00 2.59
316 317 7.599245 ACTGCAACTTTGATACTTAGTGTCTAC 59.401 37.037 10.31 0.00 0.00 2.59
317 318 7.438564 TGCAACTTTGATACTTAGTGTCTACA 58.561 34.615 10.31 0.00 0.00 2.74
318 319 7.598869 TGCAACTTTGATACTTAGTGTCTACAG 59.401 37.037 10.31 6.10 0.00 2.74
319 320 7.412020 GCAACTTTGATACTTAGTGTCTACAGC 60.412 40.741 10.31 4.09 0.00 4.40
320 321 6.631962 ACTTTGATACTTAGTGTCTACAGCC 58.368 40.000 10.31 0.00 0.00 4.85
321 322 5.593679 TTGATACTTAGTGTCTACAGCCC 57.406 43.478 10.31 0.00 0.00 5.19
322 323 3.958798 TGATACTTAGTGTCTACAGCCCC 59.041 47.826 10.31 0.00 0.00 5.80
323 324 1.569653 ACTTAGTGTCTACAGCCCCC 58.430 55.000 0.00 0.00 0.00 5.40
324 325 1.078989 ACTTAGTGTCTACAGCCCCCT 59.921 52.381 0.00 0.00 0.00 4.79
325 326 1.757699 CTTAGTGTCTACAGCCCCCTC 59.242 57.143 0.00 0.00 0.00 4.30
326 327 1.008403 TAGTGTCTACAGCCCCCTCT 58.992 55.000 0.00 0.00 0.00 3.69
327 328 1.008403 AGTGTCTACAGCCCCCTCTA 58.992 55.000 0.00 0.00 0.00 2.43
328 329 1.063567 AGTGTCTACAGCCCCCTCTAG 60.064 57.143 0.00 0.00 0.00 2.43
329 330 1.063867 GTGTCTACAGCCCCCTCTAGA 60.064 57.143 0.00 0.00 0.00 2.43
330 331 1.063867 TGTCTACAGCCCCCTCTAGAC 60.064 57.143 0.00 0.00 38.99 2.59
331 332 1.063867 GTCTACAGCCCCCTCTAGACA 60.064 57.143 0.00 0.00 38.62 3.41
332 333 1.063867 TCTACAGCCCCCTCTAGACAC 60.064 57.143 0.00 0.00 0.00 3.67
333 334 0.032416 TACAGCCCCCTCTAGACACC 60.032 60.000 0.00 0.00 0.00 4.16
334 335 1.002274 CAGCCCCCTCTAGACACCT 59.998 63.158 0.00 0.00 0.00 4.00
335 336 1.045911 CAGCCCCCTCTAGACACCTC 61.046 65.000 0.00 0.00 0.00 3.85
336 337 1.225403 AGCCCCCTCTAGACACCTCT 61.225 60.000 0.00 0.00 0.00 3.69
337 338 0.325765 GCCCCCTCTAGACACCTCTT 60.326 60.000 0.00 0.00 0.00 2.85
338 339 1.783071 CCCCCTCTAGACACCTCTTC 58.217 60.000 0.00 0.00 0.00 2.87
339 340 1.289530 CCCCCTCTAGACACCTCTTCT 59.710 57.143 0.00 0.00 0.00 2.85
340 341 2.661718 CCCCTCTAGACACCTCTTCTC 58.338 57.143 0.00 0.00 0.00 2.87
341 342 2.024846 CCCCTCTAGACACCTCTTCTCA 60.025 54.545 0.00 0.00 0.00 3.27
342 343 3.564571 CCCCTCTAGACACCTCTTCTCAA 60.565 52.174 0.00 0.00 0.00 3.02
343 344 3.699038 CCCTCTAGACACCTCTTCTCAAG 59.301 52.174 0.00 0.00 0.00 3.02
344 345 3.699038 CCTCTAGACACCTCTTCTCAAGG 59.301 52.174 0.00 0.00 39.96 3.61
346 347 4.337145 TCTAGACACCTCTTCTCAAGGTC 58.663 47.826 0.00 0.00 45.48 3.85
347 348 2.252714 AGACACCTCTTCTCAAGGTCC 58.747 52.381 0.00 0.00 45.48 4.46
348 349 2.158234 AGACACCTCTTCTCAAGGTCCT 60.158 50.000 0.00 0.00 45.48 3.85
349 350 3.076182 AGACACCTCTTCTCAAGGTCCTA 59.924 47.826 0.00 0.00 45.48 2.94
350 351 3.166679 ACACCTCTTCTCAAGGTCCTAC 58.833 50.000 0.00 0.00 45.48 3.18
351 352 3.165875 CACCTCTTCTCAAGGTCCTACA 58.834 50.000 0.00 0.00 45.48 2.74
373 374 0.237761 CTTCAGCTCTTGTGCAGTGC 59.762 55.000 8.58 8.58 41.60 4.40
464 465 1.583054 GTGTTCTCGAACTTGGTGCT 58.417 50.000 10.75 0.00 41.67 4.40
470 471 0.874175 TCGAACTTGGTGCTGTCACG 60.874 55.000 0.00 0.00 44.03 4.35
474 475 0.107897 ACTTGGTGCTGTCACGAACA 60.108 50.000 0.00 0.00 44.03 3.18
540 541 1.675641 GTTGGCGTTGGAGCTGGAT 60.676 57.895 0.00 0.00 37.29 3.41
614 615 1.648116 GTGGGTAAGTAGTGGTGGGA 58.352 55.000 0.00 0.00 0.00 4.37
618 619 2.543635 GGTAAGTAGTGGTGGGAAGGA 58.456 52.381 0.00 0.00 0.00 3.36
634 635 6.500751 GTGGGAAGGATGAGTAAATATAGGGA 59.499 42.308 0.00 0.00 0.00 4.20
698 699 4.878397 ACTACATGCTCTTCAATAAGCCAC 59.122 41.667 0.00 0.00 37.73 5.01
767 768 0.820891 GCAATGAGATGGGCACGGAT 60.821 55.000 0.00 0.00 0.00 4.18
791 792 2.637025 CCGGCCGTTGACAACAAG 59.363 61.111 26.12 9.66 36.64 3.16
815 817 4.281657 GAAAGTAGCCCCTTCATCCAATT 58.718 43.478 0.00 0.00 0.00 2.32
818 820 1.312884 AGCCCCTTCATCCAATTCCT 58.687 50.000 0.00 0.00 0.00 3.36
882 884 2.579201 CCTGAGGTTGGCGACGAT 59.421 61.111 0.00 0.00 0.00 3.73
948 955 3.246301 CCACTATCATGAGGAGGATGGT 58.754 50.000 0.09 0.00 34.75 3.55
1033 1041 2.733218 CCAAGCACTTCGTCGCGA 60.733 61.111 3.71 3.71 0.00 5.87
1038 1046 2.809174 CACTTCGTCGCGATGCCA 60.809 61.111 23.40 11.26 35.23 4.92
1129 1137 2.239654 GTGACCTTGAATCAGGGATGGA 59.760 50.000 18.70 0.00 38.42 3.41
1166 1174 2.830104 TCATCACATCAAGATCGGCTG 58.170 47.619 0.00 0.00 0.00 4.85
1182 1190 0.310543 GCTGCATGGTGACGTTCAAA 59.689 50.000 0.00 0.00 0.00 2.69
1272 1280 1.168714 GGAAGCATGACGAAGCCTTT 58.831 50.000 0.00 0.00 0.00 3.11
1273 1281 2.356135 GGAAGCATGACGAAGCCTTTA 58.644 47.619 0.00 0.00 0.00 1.85
1276 1284 1.003118 AGCATGACGAAGCCTTTACCA 59.997 47.619 0.00 0.00 0.00 3.25
1292 1300 2.680370 CCACCAAGGACTAGGGCCC 61.680 68.421 16.46 16.46 41.22 5.80
1360 1368 9.349145 GTTTATGGTTTATGCGTTGAACTATTT 57.651 29.630 8.34 0.00 0.00 1.40
1455 1464 2.340210 TGTGTGCTACATGGTTGTGT 57.660 45.000 0.00 0.00 36.53 3.72
1547 1556 1.586028 CATGCCTTGGGTTTGTCCG 59.414 57.895 0.00 0.00 37.00 4.79
1571 1580 0.104487 CATGCAGGCAACCAAACACA 59.896 50.000 0.00 0.00 37.17 3.72
1603 1612 0.401356 TCAGTCCATGCAGGCAAGAA 59.599 50.000 0.00 0.00 37.29 2.52
1630 1640 0.179113 AGGCAACCAAACAACTTGCG 60.179 50.000 0.00 0.00 41.06 4.85
1673 1683 7.113437 TGCATTAACATAACCAGGCTAAGTTA 58.887 34.615 10.64 10.64 33.26 2.24
1708 1718 1.400846 TGCAGCTACTGTAGACTACGC 59.599 52.381 18.64 13.98 33.43 4.42
1733 1743 4.525467 ACACGCCCTAGGTGTACA 57.475 55.556 8.29 0.00 45.40 2.90
1761 1771 3.332034 CCAAGAAACGTTCCCTCGTATT 58.668 45.455 0.00 0.00 43.38 1.89
1802 2615 8.035394 TCTTGTATGTTAGAGGATGAACTTGAC 58.965 37.037 0.00 0.00 0.00 3.18
1820 2633 2.771943 TGACCACTCAAAGTCTCCAACT 59.228 45.455 0.00 0.00 41.10 3.16
1830 2644 0.468226 GTCTCCAACTGACCACACCA 59.532 55.000 0.00 0.00 0.00 4.17
1835 2649 0.461163 CAACTGACCACACCACGACA 60.461 55.000 0.00 0.00 0.00 4.35
1842 2656 1.591594 CACACCACGACAGCGAACT 60.592 57.895 0.00 0.00 41.64 3.01
1850 2664 0.858135 CGACAGCGAACTCTAGCGTC 60.858 60.000 0.00 0.00 40.82 5.19
1907 2721 3.039252 AGGCATAAGCTAGAGGAGTGT 57.961 47.619 0.00 0.00 41.70 3.55
1908 2722 2.697751 AGGCATAAGCTAGAGGAGTGTG 59.302 50.000 0.00 0.00 41.70 3.82
1909 2723 2.432510 GGCATAAGCTAGAGGAGTGTGT 59.567 50.000 0.00 0.00 41.70 3.72
1912 2726 4.382040 GCATAAGCTAGAGGAGTGTGTCAA 60.382 45.833 0.00 0.00 37.91 3.18
1933 2773 1.203523 CGAGGCAGAGAGCTAAACACT 59.796 52.381 0.00 0.00 44.79 3.55
1947 2788 1.428869 AACACTGAGGCAGGAACTCT 58.571 50.000 0.00 0.00 34.60 3.24
1950 2791 2.175202 CACTGAGGCAGGAACTCTACT 58.825 52.381 0.00 0.00 34.60 2.57
1975 2816 7.488322 TGAGTTCACACCTTTCCAATTTAAAG 58.512 34.615 0.00 3.89 34.40 1.85
2025 2866 7.826744 AGTTTGATTTTGCCTTCAAGGTTTAAA 59.173 29.630 5.03 3.95 37.80 1.52
2130 2971 1.079127 CGGAGCAAGACGATGGGTT 60.079 57.895 0.00 0.00 0.00 4.11
2190 3031 2.472816 GCATGTCAAATAATTGGCGGG 58.527 47.619 0.00 0.00 44.24 6.13
2235 3077 4.733850 CGAAGAAAACCAATAGGGAAAGC 58.266 43.478 0.00 0.00 41.15 3.51
2237 3079 5.048013 CGAAGAAAACCAATAGGGAAAGCTT 60.048 40.000 0.00 0.00 41.15 3.74
2249 3091 1.272480 GGAAAGCTTTTGGGGCTAGGA 60.272 52.381 14.05 0.00 39.30 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 4.078513 AGGAGGTGGAGGGGTATATATAGC 60.079 50.000 12.61 12.61 0.00 2.97
6 7 5.437043 AGAGGAGGTGGAGGGGTATATATAG 59.563 48.000 0.00 0.00 0.00 1.31
7 8 5.377607 AGAGGAGGTGGAGGGGTATATATA 58.622 45.833 0.00 0.00 0.00 0.86
8 9 4.204213 AGAGGAGGTGGAGGGGTATATAT 58.796 47.826 0.00 0.00 0.00 0.86
9 10 3.632488 AGAGGAGGTGGAGGGGTATATA 58.368 50.000 0.00 0.00 0.00 0.86
10 11 2.455064 AGAGGAGGTGGAGGGGTATAT 58.545 52.381 0.00 0.00 0.00 0.86
11 12 1.937098 AGAGGAGGTGGAGGGGTATA 58.063 55.000 0.00 0.00 0.00 1.47
12 13 1.027815 AAGAGGAGGTGGAGGGGTAT 58.972 55.000 0.00 0.00 0.00 2.73
13 14 0.338814 GAAGAGGAGGTGGAGGGGTA 59.661 60.000 0.00 0.00 0.00 3.69
14 15 1.081277 GAAGAGGAGGTGGAGGGGT 59.919 63.158 0.00 0.00 0.00 4.95
15 16 0.327000 ATGAAGAGGAGGTGGAGGGG 60.327 60.000 0.00 0.00 0.00 4.79
16 17 1.488393 GAATGAAGAGGAGGTGGAGGG 59.512 57.143 0.00 0.00 0.00 4.30
17 18 1.137872 CGAATGAAGAGGAGGTGGAGG 59.862 57.143 0.00 0.00 0.00 4.30
18 19 1.827969 ACGAATGAAGAGGAGGTGGAG 59.172 52.381 0.00 0.00 0.00 3.86
19 20 1.550524 CACGAATGAAGAGGAGGTGGA 59.449 52.381 0.00 0.00 0.00 4.02
20 21 1.406069 CCACGAATGAAGAGGAGGTGG 60.406 57.143 0.00 0.00 37.69 4.61
21 22 1.550524 TCCACGAATGAAGAGGAGGTG 59.449 52.381 0.00 0.00 0.00 4.00
22 23 1.827969 CTCCACGAATGAAGAGGAGGT 59.172 52.381 0.00 0.00 41.65 3.85
23 24 2.100584 CTCTCCACGAATGAAGAGGAGG 59.899 54.545 6.91 0.00 44.65 4.30
24 25 3.020274 TCTCTCCACGAATGAAGAGGAG 58.980 50.000 0.00 0.00 45.64 3.69
25 26 3.020274 CTCTCTCCACGAATGAAGAGGA 58.980 50.000 0.00 0.00 0.00 3.71
26 27 2.481104 GCTCTCTCCACGAATGAAGAGG 60.481 54.545 0.00 0.00 32.10 3.69
27 28 2.481104 GGCTCTCTCCACGAATGAAGAG 60.481 54.545 0.00 0.00 33.43 2.85
28 29 1.478510 GGCTCTCTCCACGAATGAAGA 59.521 52.381 0.00 0.00 0.00 2.87
29 30 1.205655 TGGCTCTCTCCACGAATGAAG 59.794 52.381 0.00 0.00 0.00 3.02
30 31 1.266178 TGGCTCTCTCCACGAATGAA 58.734 50.000 0.00 0.00 0.00 2.57
31 32 1.410517 GATGGCTCTCTCCACGAATGA 59.589 52.381 0.00 0.00 39.25 2.57
32 33 1.137675 TGATGGCTCTCTCCACGAATG 59.862 52.381 0.00 0.00 39.25 2.67
33 34 1.411977 CTGATGGCTCTCTCCACGAAT 59.588 52.381 0.00 0.00 39.25 3.34
34 35 0.820226 CTGATGGCTCTCTCCACGAA 59.180 55.000 0.00 0.00 39.25 3.85
35 36 0.034089 TCTGATGGCTCTCTCCACGA 60.034 55.000 0.00 0.00 39.25 4.35
36 37 0.102120 GTCTGATGGCTCTCTCCACG 59.898 60.000 0.00 0.00 39.25 4.94
37 38 1.136695 CAGTCTGATGGCTCTCTCCAC 59.863 57.143 0.00 0.00 39.25 4.02
38 39 1.006400 TCAGTCTGATGGCTCTCTCCA 59.994 52.381 0.00 0.00 40.97 3.86
39 40 1.774110 TCAGTCTGATGGCTCTCTCC 58.226 55.000 0.00 0.00 0.00 3.71
40 41 2.159114 GGTTCAGTCTGATGGCTCTCTC 60.159 54.545 2.68 0.00 0.00 3.20
41 42 1.830477 GGTTCAGTCTGATGGCTCTCT 59.170 52.381 2.68 0.00 0.00 3.10
42 43 1.830477 AGGTTCAGTCTGATGGCTCTC 59.170 52.381 2.68 0.00 0.00 3.20
43 44 1.949799 AGGTTCAGTCTGATGGCTCT 58.050 50.000 2.68 0.00 0.00 4.09
44 45 2.497675 TGTAGGTTCAGTCTGATGGCTC 59.502 50.000 2.68 0.00 0.00 4.70
45 46 2.234908 GTGTAGGTTCAGTCTGATGGCT 59.765 50.000 2.68 0.00 0.00 4.75
46 47 2.234908 AGTGTAGGTTCAGTCTGATGGC 59.765 50.000 2.68 0.00 0.00 4.40
47 48 4.499183 GAAGTGTAGGTTCAGTCTGATGG 58.501 47.826 2.68 0.00 0.00 3.51
48 49 4.021104 TGGAAGTGTAGGTTCAGTCTGATG 60.021 45.833 2.68 0.00 0.00 3.07
49 50 4.160329 TGGAAGTGTAGGTTCAGTCTGAT 58.840 43.478 2.68 0.00 0.00 2.90
50 51 3.572642 TGGAAGTGTAGGTTCAGTCTGA 58.427 45.455 0.00 0.00 0.00 3.27
51 52 4.058817 GTTGGAAGTGTAGGTTCAGTCTG 58.941 47.826 0.00 0.00 0.00 3.51
52 53 3.709653 TGTTGGAAGTGTAGGTTCAGTCT 59.290 43.478 0.00 0.00 0.00 3.24
53 54 4.067972 TGTTGGAAGTGTAGGTTCAGTC 57.932 45.455 0.00 0.00 0.00 3.51
54 55 4.706842 ATGTTGGAAGTGTAGGTTCAGT 57.293 40.909 0.00 0.00 0.00 3.41
55 56 5.547465 TGTATGTTGGAAGTGTAGGTTCAG 58.453 41.667 0.00 0.00 0.00 3.02
56 57 5.554437 TGTATGTTGGAAGTGTAGGTTCA 57.446 39.130 0.00 0.00 0.00 3.18
57 58 7.448748 AAATGTATGTTGGAAGTGTAGGTTC 57.551 36.000 0.00 0.00 0.00 3.62
58 59 7.724061 AGAAAATGTATGTTGGAAGTGTAGGTT 59.276 33.333 0.00 0.00 0.00 3.50
59 60 7.174946 CAGAAAATGTATGTTGGAAGTGTAGGT 59.825 37.037 0.00 0.00 0.00 3.08
60 61 7.390440 TCAGAAAATGTATGTTGGAAGTGTAGG 59.610 37.037 0.00 0.00 0.00 3.18
61 62 8.322906 TCAGAAAATGTATGTTGGAAGTGTAG 57.677 34.615 0.00 0.00 0.00 2.74
62 63 8.154203 TCTCAGAAAATGTATGTTGGAAGTGTA 58.846 33.333 0.00 0.00 0.00 2.90
63 64 6.998074 TCTCAGAAAATGTATGTTGGAAGTGT 59.002 34.615 0.00 0.00 0.00 3.55
64 65 7.388776 TCTCTCAGAAAATGTATGTTGGAAGTG 59.611 37.037 0.00 0.00 0.00 3.16
65 66 7.453393 TCTCTCAGAAAATGTATGTTGGAAGT 58.547 34.615 0.00 0.00 0.00 3.01
66 67 7.821359 TCTCTCTCAGAAAATGTATGTTGGAAG 59.179 37.037 0.00 0.00 0.00 3.46
67 68 7.679783 TCTCTCTCAGAAAATGTATGTTGGAA 58.320 34.615 0.00 0.00 0.00 3.53
68 69 7.244886 TCTCTCTCAGAAAATGTATGTTGGA 57.755 36.000 0.00 0.00 0.00 3.53
69 70 7.605691 AGTTCTCTCTCAGAAAATGTATGTTGG 59.394 37.037 0.00 0.00 43.10 3.77
70 71 8.545229 AGTTCTCTCTCAGAAAATGTATGTTG 57.455 34.615 0.00 0.00 43.10 3.33
71 72 9.646427 GTAGTTCTCTCTCAGAAAATGTATGTT 57.354 33.333 0.00 0.00 43.10 2.71
72 73 8.254508 GGTAGTTCTCTCTCAGAAAATGTATGT 58.745 37.037 0.00 0.00 43.10 2.29
73 74 8.474025 AGGTAGTTCTCTCTCAGAAAATGTATG 58.526 37.037 0.00 0.00 43.10 2.39
74 75 8.602472 AGGTAGTTCTCTCTCAGAAAATGTAT 57.398 34.615 0.00 0.00 43.10 2.29
75 76 8.958506 GTAGGTAGTTCTCTCTCAGAAAATGTA 58.041 37.037 0.00 0.00 43.10 2.29
76 77 6.926630 AGGTAGTTCTCTCTCAGAAAATGT 57.073 37.500 0.00 0.00 43.10 2.71
77 78 8.062065 AGTAGGTAGTTCTCTCTCAGAAAATG 57.938 38.462 0.00 0.00 43.10 2.32
78 79 7.891183 TGAGTAGGTAGTTCTCTCTCAGAAAAT 59.109 37.037 0.00 0.00 43.10 1.82
79 80 7.232188 TGAGTAGGTAGTTCTCTCTCAGAAAA 58.768 38.462 0.00 0.00 43.10 2.29
80 81 6.780901 TGAGTAGGTAGTTCTCTCTCAGAAA 58.219 40.000 0.00 0.00 43.10 2.52
81 82 6.375830 TGAGTAGGTAGTTCTCTCTCAGAA 57.624 41.667 0.00 0.00 38.95 3.02
82 83 6.069905 ACATGAGTAGGTAGTTCTCTCTCAGA 60.070 42.308 0.00 0.00 34.26 3.27
83 84 6.038161 CACATGAGTAGGTAGTTCTCTCTCAG 59.962 46.154 0.00 0.00 34.26 3.35
84 85 5.883115 CACATGAGTAGGTAGTTCTCTCTCA 59.117 44.000 0.00 0.00 34.78 3.27
85 86 5.883673 ACACATGAGTAGGTAGTTCTCTCTC 59.116 44.000 0.00 0.00 0.00 3.20
86 87 5.822204 ACACATGAGTAGGTAGTTCTCTCT 58.178 41.667 0.00 0.00 0.00 3.10
87 88 6.151312 TCAACACATGAGTAGGTAGTTCTCTC 59.849 42.308 0.00 0.00 33.04 3.20
88 89 6.010850 TCAACACATGAGTAGGTAGTTCTCT 58.989 40.000 0.00 0.00 33.04 3.10
89 90 6.268825 TCAACACATGAGTAGGTAGTTCTC 57.731 41.667 0.00 0.00 33.04 2.87
102 103 6.126796 TGGAATATCTTAGCCTCAACACATGA 60.127 38.462 0.00 0.00 36.38 3.07
103 104 6.057533 TGGAATATCTTAGCCTCAACACATG 58.942 40.000 0.00 0.00 0.00 3.21
104 105 6.252599 TGGAATATCTTAGCCTCAACACAT 57.747 37.500 0.00 0.00 0.00 3.21
105 106 5.692115 TGGAATATCTTAGCCTCAACACA 57.308 39.130 0.00 0.00 0.00 3.72
106 107 6.205658 GGAATGGAATATCTTAGCCTCAACAC 59.794 42.308 0.00 0.00 0.00 3.32
107 108 6.101734 AGGAATGGAATATCTTAGCCTCAACA 59.898 38.462 0.00 0.00 0.00 3.33
108 109 6.538263 AGGAATGGAATATCTTAGCCTCAAC 58.462 40.000 0.00 0.00 0.00 3.18
109 110 6.770286 AGGAATGGAATATCTTAGCCTCAA 57.230 37.500 0.00 0.00 0.00 3.02
110 111 6.213600 GGTAGGAATGGAATATCTTAGCCTCA 59.786 42.308 0.00 0.00 0.00 3.86
111 112 6.213600 TGGTAGGAATGGAATATCTTAGCCTC 59.786 42.308 0.00 0.00 0.00 4.70
112 113 6.091555 TGGTAGGAATGGAATATCTTAGCCT 58.908 40.000 0.00 0.00 0.00 4.58
113 114 6.374417 TGGTAGGAATGGAATATCTTAGCC 57.626 41.667 0.00 0.00 0.00 3.93
114 115 9.553064 CATATGGTAGGAATGGAATATCTTAGC 57.447 37.037 0.00 0.00 0.00 3.09
121 122 9.964354 CAAGATTCATATGGTAGGAATGGAATA 57.036 33.333 2.13 0.00 39.07 1.75
122 123 8.672329 TCAAGATTCATATGGTAGGAATGGAAT 58.328 33.333 2.13 0.00 39.07 3.01
123 124 8.044574 TCAAGATTCATATGGTAGGAATGGAA 57.955 34.615 2.13 0.00 39.07 3.53
124 125 7.631510 TCAAGATTCATATGGTAGGAATGGA 57.368 36.000 2.13 0.00 39.07 3.41
125 126 8.327271 AGATCAAGATTCATATGGTAGGAATGG 58.673 37.037 2.13 0.00 39.07 3.16
126 127 9.381033 GAGATCAAGATTCATATGGTAGGAATG 57.619 37.037 2.13 0.00 39.07 2.67
127 128 9.336462 AGAGATCAAGATTCATATGGTAGGAAT 57.664 33.333 2.13 0.00 41.35 3.01
128 129 8.733092 AGAGATCAAGATTCATATGGTAGGAA 57.267 34.615 2.13 0.00 32.63 3.36
129 130 9.473007 CTAGAGATCAAGATTCATATGGTAGGA 57.527 37.037 2.13 0.00 0.00 2.94
130 131 8.196771 GCTAGAGATCAAGATTCATATGGTAGG 58.803 40.741 2.13 0.00 0.00 3.18
131 132 8.196771 GGCTAGAGATCAAGATTCATATGGTAG 58.803 40.741 2.13 0.00 0.00 3.18
132 133 7.898100 AGGCTAGAGATCAAGATTCATATGGTA 59.102 37.037 2.13 0.00 0.00 3.25
133 134 6.730038 AGGCTAGAGATCAAGATTCATATGGT 59.270 38.462 2.13 0.00 0.00 3.55
134 135 7.185318 AGGCTAGAGATCAAGATTCATATGG 57.815 40.000 2.13 0.00 0.00 2.74
135 136 7.765360 GGAAGGCTAGAGATCAAGATTCATATG 59.235 40.741 0.00 0.00 0.00 1.78
136 137 7.092935 GGGAAGGCTAGAGATCAAGATTCATAT 60.093 40.741 0.00 0.00 0.00 1.78
137 138 6.212388 GGGAAGGCTAGAGATCAAGATTCATA 59.788 42.308 0.00 0.00 0.00 2.15
138 139 5.012975 GGGAAGGCTAGAGATCAAGATTCAT 59.987 44.000 0.00 0.00 0.00 2.57
139 140 4.346418 GGGAAGGCTAGAGATCAAGATTCA 59.654 45.833 0.00 0.00 0.00 2.57
140 141 4.262851 GGGGAAGGCTAGAGATCAAGATTC 60.263 50.000 0.00 0.00 0.00 2.52
141 142 3.650461 GGGGAAGGCTAGAGATCAAGATT 59.350 47.826 0.00 0.00 0.00 2.40
142 143 3.247162 GGGGAAGGCTAGAGATCAAGAT 58.753 50.000 0.00 0.00 0.00 2.40
143 144 2.023015 TGGGGAAGGCTAGAGATCAAGA 60.023 50.000 0.00 0.00 0.00 3.02
144 145 2.402564 TGGGGAAGGCTAGAGATCAAG 58.597 52.381 0.00 0.00 0.00 3.02
145 146 2.568546 TGGGGAAGGCTAGAGATCAA 57.431 50.000 0.00 0.00 0.00 2.57
146 147 2.293184 ACTTGGGGAAGGCTAGAGATCA 60.293 50.000 0.00 0.00 0.00 2.92
147 148 2.403561 ACTTGGGGAAGGCTAGAGATC 58.596 52.381 0.00 0.00 0.00 2.75
148 149 2.507471 CAACTTGGGGAAGGCTAGAGAT 59.493 50.000 0.00 0.00 0.00 2.75
149 150 1.909302 CAACTTGGGGAAGGCTAGAGA 59.091 52.381 0.00 0.00 0.00 3.10
150 151 1.680249 GCAACTTGGGGAAGGCTAGAG 60.680 57.143 0.00 0.00 0.00 2.43
151 152 0.328258 GCAACTTGGGGAAGGCTAGA 59.672 55.000 0.00 0.00 0.00 2.43
152 153 0.329596 AGCAACTTGGGGAAGGCTAG 59.670 55.000 0.00 0.00 0.00 3.42
153 154 0.777446 AAGCAACTTGGGGAAGGCTA 59.223 50.000 0.00 0.00 0.00 3.93
154 155 0.105504 AAAGCAACTTGGGGAAGGCT 60.106 50.000 0.00 0.00 0.00 4.58
155 156 0.318441 GAAAGCAACTTGGGGAAGGC 59.682 55.000 0.00 0.00 0.00 4.35
156 157 0.969149 GGAAAGCAACTTGGGGAAGG 59.031 55.000 0.00 0.00 0.00 3.46
157 158 1.341209 GTGGAAAGCAACTTGGGGAAG 59.659 52.381 0.00 0.00 0.00 3.46
158 159 1.063266 AGTGGAAAGCAACTTGGGGAA 60.063 47.619 0.00 0.00 0.00 3.97
159 160 0.555769 AGTGGAAAGCAACTTGGGGA 59.444 50.000 0.00 0.00 0.00 4.81
160 161 0.961753 GAGTGGAAAGCAACTTGGGG 59.038 55.000 0.00 0.00 0.00 4.96
161 162 1.691196 TGAGTGGAAAGCAACTTGGG 58.309 50.000 0.00 0.00 0.00 4.12
162 163 3.799281 TTTGAGTGGAAAGCAACTTGG 57.201 42.857 0.00 0.00 0.00 3.61
163 164 5.192327 AGATTTGAGTGGAAAGCAACTTG 57.808 39.130 0.00 0.00 0.00 3.16
164 165 5.595952 AGAAGATTTGAGTGGAAAGCAACTT 59.404 36.000 0.00 0.00 0.00 2.66
165 166 5.136105 AGAAGATTTGAGTGGAAAGCAACT 58.864 37.500 0.00 0.00 0.00 3.16
166 167 5.444663 AGAAGATTTGAGTGGAAAGCAAC 57.555 39.130 0.00 0.00 0.00 4.17
167 168 6.461509 GGAAAGAAGATTTGAGTGGAAAGCAA 60.462 38.462 0.00 0.00 0.00 3.91
168 169 5.010012 GGAAAGAAGATTTGAGTGGAAAGCA 59.990 40.000 0.00 0.00 0.00 3.91
169 170 5.010012 TGGAAAGAAGATTTGAGTGGAAAGC 59.990 40.000 0.00 0.00 0.00 3.51
170 171 6.442112 GTGGAAAGAAGATTTGAGTGGAAAG 58.558 40.000 0.00 0.00 0.00 2.62
171 172 5.301805 GGTGGAAAGAAGATTTGAGTGGAAA 59.698 40.000 0.00 0.00 0.00 3.13
172 173 4.827284 GGTGGAAAGAAGATTTGAGTGGAA 59.173 41.667 0.00 0.00 0.00 3.53
173 174 4.141274 TGGTGGAAAGAAGATTTGAGTGGA 60.141 41.667 0.00 0.00 0.00 4.02
174 175 4.144297 TGGTGGAAAGAAGATTTGAGTGG 58.856 43.478 0.00 0.00 0.00 4.00
175 176 5.065914 TCTGGTGGAAAGAAGATTTGAGTG 58.934 41.667 0.00 0.00 0.00 3.51
176 177 5.310409 TCTGGTGGAAAGAAGATTTGAGT 57.690 39.130 0.00 0.00 0.00 3.41
177 178 5.356470 GGATCTGGTGGAAAGAAGATTTGAG 59.644 44.000 0.00 0.00 29.59 3.02
178 179 5.222109 TGGATCTGGTGGAAAGAAGATTTGA 60.222 40.000 0.00 0.00 29.59 2.69
179 180 5.012239 TGGATCTGGTGGAAAGAAGATTTG 58.988 41.667 0.00 0.00 29.59 2.32
180 181 5.261040 TGGATCTGGTGGAAAGAAGATTT 57.739 39.130 0.00 0.00 29.59 2.17
181 182 4.934797 TGGATCTGGTGGAAAGAAGATT 57.065 40.909 0.00 0.00 29.59 2.40
182 183 4.934797 TTGGATCTGGTGGAAAGAAGAT 57.065 40.909 0.00 0.00 32.10 2.40
183 184 4.722526 TTTGGATCTGGTGGAAAGAAGA 57.277 40.909 0.00 0.00 0.00 2.87
184 185 4.400567 GGATTTGGATCTGGTGGAAAGAAG 59.599 45.833 0.00 0.00 32.66 2.85
185 186 4.044571 AGGATTTGGATCTGGTGGAAAGAA 59.955 41.667 0.00 0.00 32.66 2.52
186 187 3.593328 AGGATTTGGATCTGGTGGAAAGA 59.407 43.478 0.00 0.00 32.66 2.52
187 188 3.973425 AGGATTTGGATCTGGTGGAAAG 58.027 45.455 0.00 0.00 32.66 2.62
188 189 5.193527 TCATAGGATTTGGATCTGGTGGAAA 59.806 40.000 0.00 0.00 32.66 3.13
189 190 4.726317 TCATAGGATTTGGATCTGGTGGAA 59.274 41.667 0.00 0.00 32.66 3.53
190 191 4.306391 TCATAGGATTTGGATCTGGTGGA 58.694 43.478 0.00 0.00 32.66 4.02
191 192 4.349048 TCTCATAGGATTTGGATCTGGTGG 59.651 45.833 0.00 0.00 32.66 4.61
192 193 5.306419 TCTCTCATAGGATTTGGATCTGGTG 59.694 44.000 0.00 0.00 32.66 4.17
193 194 5.471424 TCTCTCATAGGATTTGGATCTGGT 58.529 41.667 0.00 0.00 32.66 4.00
194 195 5.779260 TCTCTCTCATAGGATTTGGATCTGG 59.221 44.000 0.00 0.00 32.66 3.86
195 196 6.494491 ACTCTCTCTCATAGGATTTGGATCTG 59.506 42.308 0.00 0.00 32.66 2.90
196 197 6.623329 ACTCTCTCTCATAGGATTTGGATCT 58.377 40.000 0.00 0.00 32.66 2.75
197 198 6.916360 ACTCTCTCTCATAGGATTTGGATC 57.084 41.667 0.00 0.00 0.00 3.36
198 199 6.843333 TCAACTCTCTCTCATAGGATTTGGAT 59.157 38.462 0.00 0.00 0.00 3.41
199 200 6.197903 TCAACTCTCTCTCATAGGATTTGGA 58.802 40.000 0.00 0.00 0.00 3.53
200 201 6.098124 ACTCAACTCTCTCTCATAGGATTTGG 59.902 42.308 0.00 0.00 0.00 3.28
201 202 6.979817 CACTCAACTCTCTCTCATAGGATTTG 59.020 42.308 0.00 0.00 0.00 2.32
202 203 6.667414 ACACTCAACTCTCTCTCATAGGATTT 59.333 38.462 0.00 0.00 0.00 2.17
203 204 6.194235 ACACTCAACTCTCTCTCATAGGATT 58.806 40.000 0.00 0.00 0.00 3.01
204 205 5.765510 ACACTCAACTCTCTCTCATAGGAT 58.234 41.667 0.00 0.00 0.00 3.24
205 206 5.186256 ACACTCAACTCTCTCTCATAGGA 57.814 43.478 0.00 0.00 0.00 2.94
206 207 5.394005 CCAACACTCAACTCTCTCTCATAGG 60.394 48.000 0.00 0.00 0.00 2.57
207 208 5.394005 CCCAACACTCAACTCTCTCTCATAG 60.394 48.000 0.00 0.00 0.00 2.23
208 209 4.464244 CCCAACACTCAACTCTCTCTCATA 59.536 45.833 0.00 0.00 0.00 2.15
209 210 3.260380 CCCAACACTCAACTCTCTCTCAT 59.740 47.826 0.00 0.00 0.00 2.90
210 211 2.630098 CCCAACACTCAACTCTCTCTCA 59.370 50.000 0.00 0.00 0.00 3.27
211 212 2.028567 CCCCAACACTCAACTCTCTCTC 60.029 54.545 0.00 0.00 0.00 3.20
212 213 1.974236 CCCCAACACTCAACTCTCTCT 59.026 52.381 0.00 0.00 0.00 3.10
213 214 1.971357 TCCCCAACACTCAACTCTCTC 59.029 52.381 0.00 0.00 0.00 3.20
214 215 1.974236 CTCCCCAACACTCAACTCTCT 59.026 52.381 0.00 0.00 0.00 3.10
215 216 1.971357 TCTCCCCAACACTCAACTCTC 59.029 52.381 0.00 0.00 0.00 3.20
216 217 1.694696 GTCTCCCCAACACTCAACTCT 59.305 52.381 0.00 0.00 0.00 3.24
217 218 1.694696 AGTCTCCCCAACACTCAACTC 59.305 52.381 0.00 0.00 0.00 3.01
218 219 1.807814 AGTCTCCCCAACACTCAACT 58.192 50.000 0.00 0.00 0.00 3.16
219 220 3.260884 TGATAGTCTCCCCAACACTCAAC 59.739 47.826 0.00 0.00 0.00 3.18
220 221 3.516586 TGATAGTCTCCCCAACACTCAA 58.483 45.455 0.00 0.00 0.00 3.02
221 222 3.184382 TGATAGTCTCCCCAACACTCA 57.816 47.619 0.00 0.00 0.00 3.41
222 223 4.762289 AATGATAGTCTCCCCAACACTC 57.238 45.455 0.00 0.00 0.00 3.51
223 224 4.536090 TCAAATGATAGTCTCCCCAACACT 59.464 41.667 0.00 0.00 0.00 3.55
224 225 4.843728 TCAAATGATAGTCTCCCCAACAC 58.156 43.478 0.00 0.00 0.00 3.32
225 226 5.500234 CTTCAAATGATAGTCTCCCCAACA 58.500 41.667 0.00 0.00 0.00 3.33
226 227 4.336713 GCTTCAAATGATAGTCTCCCCAAC 59.663 45.833 0.00 0.00 0.00 3.77
227 228 4.018506 TGCTTCAAATGATAGTCTCCCCAA 60.019 41.667 0.00 0.00 0.00 4.12
228 229 3.523157 TGCTTCAAATGATAGTCTCCCCA 59.477 43.478 0.00 0.00 0.00 4.96
229 230 3.879892 GTGCTTCAAATGATAGTCTCCCC 59.120 47.826 0.00 0.00 0.00 4.81
230 231 4.517285 TGTGCTTCAAATGATAGTCTCCC 58.483 43.478 0.00 0.00 0.00 4.30
231 232 5.877012 TCTTGTGCTTCAAATGATAGTCTCC 59.123 40.000 0.00 0.00 35.48 3.71
232 233 6.456718 GCTCTTGTGCTTCAAATGATAGTCTC 60.457 42.308 0.00 0.00 35.48 3.36
233 234 5.353678 GCTCTTGTGCTTCAAATGATAGTCT 59.646 40.000 0.00 0.00 35.48 3.24
234 235 5.122869 TGCTCTTGTGCTTCAAATGATAGTC 59.877 40.000 0.00 0.00 35.48 2.59
235 236 5.005740 TGCTCTTGTGCTTCAAATGATAGT 58.994 37.500 0.00 0.00 35.48 2.12
236 237 5.556355 TGCTCTTGTGCTTCAAATGATAG 57.444 39.130 0.00 0.00 35.48 2.08
237 238 5.106038 CCTTGCTCTTGTGCTTCAAATGATA 60.106 40.000 0.00 0.00 35.48 2.15
238 239 4.321750 CCTTGCTCTTGTGCTTCAAATGAT 60.322 41.667 0.00 0.00 35.48 2.45
239 240 3.005050 CCTTGCTCTTGTGCTTCAAATGA 59.995 43.478 0.00 0.00 35.48 2.57
240 241 3.005050 TCCTTGCTCTTGTGCTTCAAATG 59.995 43.478 0.00 0.00 35.48 2.32
241 242 3.225104 TCCTTGCTCTTGTGCTTCAAAT 58.775 40.909 0.00 0.00 35.48 2.32
242 243 2.620115 CTCCTTGCTCTTGTGCTTCAAA 59.380 45.455 0.00 0.00 35.48 2.69
243 244 2.224606 CTCCTTGCTCTTGTGCTTCAA 58.775 47.619 0.00 0.00 34.61 2.69
244 245 1.141657 ACTCCTTGCTCTTGTGCTTCA 59.858 47.619 0.00 0.00 0.00 3.02
245 246 1.803555 GACTCCTTGCTCTTGTGCTTC 59.196 52.381 0.00 0.00 0.00 3.86
246 247 1.544314 GGACTCCTTGCTCTTGTGCTT 60.544 52.381 0.00 0.00 0.00 3.91
247 248 0.036022 GGACTCCTTGCTCTTGTGCT 59.964 55.000 0.00 0.00 0.00 4.40
248 249 0.250467 TGGACTCCTTGCTCTTGTGC 60.250 55.000 0.00 0.00 0.00 4.57
249 250 1.071385 AGTGGACTCCTTGCTCTTGTG 59.929 52.381 0.00 0.00 0.00 3.33
250 251 1.428869 AGTGGACTCCTTGCTCTTGT 58.571 50.000 0.00 0.00 0.00 3.16
251 252 2.557920 AAGTGGACTCCTTGCTCTTG 57.442 50.000 0.00 0.00 29.14 3.02
252 253 4.103311 AGTTTAAGTGGACTCCTTGCTCTT 59.897 41.667 0.00 0.00 34.22 2.85
253 254 3.648545 AGTTTAAGTGGACTCCTTGCTCT 59.351 43.478 0.00 0.00 0.00 4.09
254 255 4.009370 AGTTTAAGTGGACTCCTTGCTC 57.991 45.455 0.00 0.00 0.00 4.26
255 256 4.439253 AAGTTTAAGTGGACTCCTTGCT 57.561 40.909 0.00 0.00 0.00 3.91
256 257 6.485648 TCTTTAAGTTTAAGTGGACTCCTTGC 59.514 38.462 1.83 0.00 0.00 4.01
257 258 8.343366 GTTCTTTAAGTTTAAGTGGACTCCTTG 58.657 37.037 1.83 0.00 0.00 3.61
258 259 7.501559 GGTTCTTTAAGTTTAAGTGGACTCCTT 59.498 37.037 1.83 0.00 0.00 3.36
259 260 6.996879 GGTTCTTTAAGTTTAAGTGGACTCCT 59.003 38.462 1.83 0.00 0.00 3.69
260 261 6.996879 AGGTTCTTTAAGTTTAAGTGGACTCC 59.003 38.462 1.83 0.00 0.00 3.85
261 262 9.551734 TTAGGTTCTTTAAGTTTAAGTGGACTC 57.448 33.333 1.83 0.00 0.00 3.36
262 263 9.910267 TTTAGGTTCTTTAAGTTTAAGTGGACT 57.090 29.630 1.83 0.70 0.00 3.85
271 272 9.146984 GTTGCAGTTTTTAGGTTCTTTAAGTTT 57.853 29.630 0.00 0.00 0.00 2.66
272 273 8.528643 AGTTGCAGTTTTTAGGTTCTTTAAGTT 58.471 29.630 0.00 0.00 0.00 2.66
273 274 8.063200 AGTTGCAGTTTTTAGGTTCTTTAAGT 57.937 30.769 0.00 0.00 0.00 2.24
274 275 8.926715 AAGTTGCAGTTTTTAGGTTCTTTAAG 57.073 30.769 0.00 0.00 0.00 1.85
275 276 9.145865 CAAAGTTGCAGTTTTTAGGTTCTTTAA 57.854 29.630 0.00 0.00 0.00 1.52
276 277 8.524487 TCAAAGTTGCAGTTTTTAGGTTCTTTA 58.476 29.630 0.00 0.00 0.00 1.85
277 278 7.382898 TCAAAGTTGCAGTTTTTAGGTTCTTT 58.617 30.769 0.00 0.00 0.00 2.52
278 279 6.930731 TCAAAGTTGCAGTTTTTAGGTTCTT 58.069 32.000 0.00 0.00 0.00 2.52
279 280 6.524101 TCAAAGTTGCAGTTTTTAGGTTCT 57.476 33.333 0.00 0.00 0.00 3.01
280 281 8.135529 AGTATCAAAGTTGCAGTTTTTAGGTTC 58.864 33.333 0.00 0.00 0.00 3.62
281 282 8.007405 AGTATCAAAGTTGCAGTTTTTAGGTT 57.993 30.769 0.00 0.00 0.00 3.50
282 283 7.582667 AGTATCAAAGTTGCAGTTTTTAGGT 57.417 32.000 0.00 0.00 0.00 3.08
283 284 9.612620 CTAAGTATCAAAGTTGCAGTTTTTAGG 57.387 33.333 0.00 0.00 0.00 2.69
285 286 9.944663 CACTAAGTATCAAAGTTGCAGTTTTTA 57.055 29.630 0.00 0.00 0.00 1.52
286 287 8.466798 ACACTAAGTATCAAAGTTGCAGTTTTT 58.533 29.630 0.00 0.00 0.00 1.94
287 288 7.996385 ACACTAAGTATCAAAGTTGCAGTTTT 58.004 30.769 0.00 0.00 0.00 2.43
288 289 7.499232 AGACACTAAGTATCAAAGTTGCAGTTT 59.501 33.333 0.00 0.00 0.00 2.66
289 290 6.992715 AGACACTAAGTATCAAAGTTGCAGTT 59.007 34.615 0.00 0.00 0.00 3.16
290 291 6.525629 AGACACTAAGTATCAAAGTTGCAGT 58.474 36.000 0.00 0.00 0.00 4.40
291 292 7.598869 TGTAGACACTAAGTATCAAAGTTGCAG 59.401 37.037 0.00 0.00 0.00 4.41
292 293 7.438564 TGTAGACACTAAGTATCAAAGTTGCA 58.561 34.615 0.00 0.00 0.00 4.08
293 294 7.412020 GCTGTAGACACTAAGTATCAAAGTTGC 60.412 40.741 0.00 0.00 0.00 4.17
294 295 7.063544 GGCTGTAGACACTAAGTATCAAAGTTG 59.936 40.741 0.00 0.00 0.00 3.16
295 296 7.097834 GGCTGTAGACACTAAGTATCAAAGTT 58.902 38.462 0.00 0.00 0.00 2.66
296 297 6.351117 GGGCTGTAGACACTAAGTATCAAAGT 60.351 42.308 0.00 0.00 0.00 2.66
297 298 6.043411 GGGCTGTAGACACTAAGTATCAAAG 58.957 44.000 0.00 0.00 0.00 2.77
298 299 5.105064 GGGGCTGTAGACACTAAGTATCAAA 60.105 44.000 0.00 0.00 0.00 2.69
299 300 4.404715 GGGGCTGTAGACACTAAGTATCAA 59.595 45.833 0.00 0.00 0.00 2.57
300 301 3.958798 GGGGCTGTAGACACTAAGTATCA 59.041 47.826 0.00 0.00 0.00 2.15
301 302 3.321396 GGGGGCTGTAGACACTAAGTATC 59.679 52.174 0.00 0.00 0.00 2.24
302 303 3.052033 AGGGGGCTGTAGACACTAAGTAT 60.052 47.826 0.00 0.00 0.00 2.12
303 304 2.313945 AGGGGGCTGTAGACACTAAGTA 59.686 50.000 0.00 0.00 0.00 2.24
304 305 1.078989 AGGGGGCTGTAGACACTAAGT 59.921 52.381 0.00 0.00 0.00 2.24
305 306 1.757699 GAGGGGGCTGTAGACACTAAG 59.242 57.143 0.00 0.00 0.00 2.18
306 307 1.361543 AGAGGGGGCTGTAGACACTAA 59.638 52.381 0.00 0.00 0.00 2.24
307 308 1.008403 AGAGGGGGCTGTAGACACTA 58.992 55.000 0.00 0.00 0.00 2.74
308 309 1.008403 TAGAGGGGGCTGTAGACACT 58.992 55.000 0.00 0.00 0.00 3.55
309 310 1.063867 TCTAGAGGGGGCTGTAGACAC 60.064 57.143 0.00 0.00 0.00 3.67
310 311 1.063867 GTCTAGAGGGGGCTGTAGACA 60.064 57.143 2.98 0.00 44.61 3.41
311 312 1.063867 TGTCTAGAGGGGGCTGTAGAC 60.064 57.143 1.70 1.70 45.11 2.59
312 313 1.063867 GTGTCTAGAGGGGGCTGTAGA 60.064 57.143 0.00 0.00 0.00 2.59
313 314 1.404843 GTGTCTAGAGGGGGCTGTAG 58.595 60.000 0.00 0.00 0.00 2.74
314 315 0.032416 GGTGTCTAGAGGGGGCTGTA 60.032 60.000 0.00 0.00 0.00 2.74
315 316 1.306226 GGTGTCTAGAGGGGGCTGT 60.306 63.158 0.00 0.00 0.00 4.40
316 317 1.002274 AGGTGTCTAGAGGGGGCTG 59.998 63.158 0.00 0.00 0.00 4.85
317 318 1.225403 AGAGGTGTCTAGAGGGGGCT 61.225 60.000 0.00 0.00 0.00 5.19
318 319 0.325765 AAGAGGTGTCTAGAGGGGGC 60.326 60.000 0.00 0.00 30.45 5.80
319 320 1.289530 AGAAGAGGTGTCTAGAGGGGG 59.710 57.143 0.00 0.00 30.45 5.40
320 321 2.024846 TGAGAAGAGGTGTCTAGAGGGG 60.025 54.545 0.00 0.00 30.45 4.79
321 322 3.374042 TGAGAAGAGGTGTCTAGAGGG 57.626 52.381 0.00 0.00 30.45 4.30
322 323 3.699038 CCTTGAGAAGAGGTGTCTAGAGG 59.301 52.174 0.00 0.00 30.45 3.69
323 324 4.340617 ACCTTGAGAAGAGGTGTCTAGAG 58.659 47.826 0.00 0.00 45.59 2.43
324 325 4.390129 ACCTTGAGAAGAGGTGTCTAGA 57.610 45.455 0.00 0.00 45.59 2.43
332 333 3.436243 ACTGTAGGACCTTGAGAAGAGG 58.564 50.000 0.00 0.00 40.24 3.69
333 334 4.340617 AGACTGTAGGACCTTGAGAAGAG 58.659 47.826 0.00 0.00 0.00 2.85
334 335 4.390129 AGACTGTAGGACCTTGAGAAGA 57.610 45.455 0.00 0.00 0.00 2.87
335 336 4.524714 TGAAGACTGTAGGACCTTGAGAAG 59.475 45.833 0.00 0.00 0.00 2.85
336 337 4.480115 TGAAGACTGTAGGACCTTGAGAA 58.520 43.478 0.00 0.00 0.00 2.87
337 338 4.082845 CTGAAGACTGTAGGACCTTGAGA 58.917 47.826 0.00 0.00 0.00 3.27
338 339 3.367910 GCTGAAGACTGTAGGACCTTGAG 60.368 52.174 0.00 0.00 0.00 3.02
339 340 2.563179 GCTGAAGACTGTAGGACCTTGA 59.437 50.000 0.00 0.00 0.00 3.02
340 341 2.564947 AGCTGAAGACTGTAGGACCTTG 59.435 50.000 0.00 0.00 0.00 3.61
341 342 2.829120 GAGCTGAAGACTGTAGGACCTT 59.171 50.000 0.00 0.00 0.00 3.50
342 343 2.042433 AGAGCTGAAGACTGTAGGACCT 59.958 50.000 0.00 0.00 0.00 3.85
343 344 2.452505 AGAGCTGAAGACTGTAGGACC 58.547 52.381 0.00 0.00 0.00 4.46
344 345 3.257127 ACAAGAGCTGAAGACTGTAGGAC 59.743 47.826 0.00 0.00 0.00 3.85
345 346 3.256879 CACAAGAGCTGAAGACTGTAGGA 59.743 47.826 0.00 0.00 0.00 2.94
346 347 3.583806 CACAAGAGCTGAAGACTGTAGG 58.416 50.000 0.00 0.00 0.00 3.18
347 348 2.992543 GCACAAGAGCTGAAGACTGTAG 59.007 50.000 0.00 0.00 0.00 2.74
348 349 2.365293 TGCACAAGAGCTGAAGACTGTA 59.635 45.455 0.00 0.00 34.99 2.74
349 350 1.139654 TGCACAAGAGCTGAAGACTGT 59.860 47.619 0.00 0.00 34.99 3.55
350 351 1.799403 CTGCACAAGAGCTGAAGACTG 59.201 52.381 0.00 0.00 35.73 3.51
351 352 1.415659 ACTGCACAAGAGCTGAAGACT 59.584 47.619 0.00 0.00 37.23 3.24
373 374 0.818445 GATGCAGTGCTCATGAGGGG 60.818 60.000 23.89 0.02 0.00 4.79
464 465 1.444250 GGGTGGTCTGTTCGTGACA 59.556 57.895 0.00 0.00 36.26 3.58
470 471 0.037232 CTTCCTCGGGTGGTCTGTTC 60.037 60.000 0.00 0.00 0.00 3.18
474 475 0.905337 CCTTCTTCCTCGGGTGGTCT 60.905 60.000 0.00 0.00 0.00 3.85
540 541 0.964700 CCATCGCCATGAGCTCTAGA 59.035 55.000 16.19 7.38 40.39 2.43
614 615 7.093289 CCATCGTCCCTATATTTACTCATCCTT 60.093 40.741 0.00 0.00 0.00 3.36
618 619 7.182760 TCTCCATCGTCCCTATATTTACTCAT 58.817 38.462 0.00 0.00 0.00 2.90
634 635 1.566703 TCTTCTCCTCCTCTCCATCGT 59.433 52.381 0.00 0.00 0.00 3.73
698 699 1.933181 TCAAGCACAACACAGAGTTCG 59.067 47.619 0.00 0.00 38.74 3.95
791 792 1.133761 GGATGAAGGGGCTACTTTCCC 60.134 57.143 0.00 0.00 43.46 3.97
794 795 4.281657 GAATTGGATGAAGGGGCTACTTT 58.718 43.478 0.00 0.00 0.00 2.66
798 800 2.175499 CAGGAATTGGATGAAGGGGCTA 59.825 50.000 0.00 0.00 0.00 3.93
815 817 2.061220 CAGCACAACCTCCTCAGGA 58.939 57.895 0.00 0.00 43.65 3.86
818 820 2.431683 GGCAGCACAACCTCCTCA 59.568 61.111 0.00 0.00 0.00 3.86
843 845 1.136984 CTTCGGGTCTTCCTCGACG 59.863 63.158 0.00 0.00 36.62 5.12
844 846 0.170784 GTCTTCGGGTCTTCCTCGAC 59.829 60.000 0.00 0.00 36.62 4.20
845 847 1.303799 CGTCTTCGGGTCTTCCTCGA 61.304 60.000 0.00 0.00 35.68 4.04
882 884 4.166888 GGCTCCTCCATGCGCTCA 62.167 66.667 9.73 0.00 34.01 4.26
900 903 2.482374 CAGCGCTTGTTGCTAGGC 59.518 61.111 7.50 0.00 41.72 3.93
948 955 1.490490 ACCTTGCAGAAGTGAGTTGGA 59.510 47.619 0.00 0.00 0.00 3.53
976 983 0.250467 ATGCACTCAAGCTTCGGTGT 60.250 50.000 21.75 7.63 34.99 4.16
1033 1041 1.537202 GAGCTTGAACTTCGTTGGCAT 59.463 47.619 0.00 0.00 0.00 4.40
1038 1046 2.872858 GTTCCTGAGCTTGAACTTCGTT 59.127 45.455 14.11 0.00 38.24 3.85
1114 1122 1.284785 GGTGGTCCATCCCTGATTCAA 59.715 52.381 0.00 0.00 34.77 2.69
1117 1125 2.127708 GTAGGTGGTCCATCCCTGATT 58.872 52.381 10.68 0.00 35.89 2.57
1125 1133 2.584608 GCTGCGTAGGTGGTCCAT 59.415 61.111 1.76 0.00 35.89 3.41
1129 1137 3.584868 GAACGGCTGCGTAGGTGGT 62.585 63.158 1.76 0.00 0.00 4.16
1152 1160 0.591659 CCATGCAGCCGATCTTGATG 59.408 55.000 0.00 0.00 0.00 3.07
1166 1174 1.069227 GGAGTTTGAACGTCACCATGC 60.069 52.381 0.00 0.00 0.00 4.06
1182 1190 1.606889 GGTGTCGGGAGTGAGGAGT 60.607 63.158 0.00 0.00 0.00 3.85
1272 1280 0.619543 GGCCCTAGTCCTTGGTGGTA 60.620 60.000 0.00 0.00 37.07 3.25
1273 1281 1.923909 GGCCCTAGTCCTTGGTGGT 60.924 63.158 0.00 0.00 37.07 4.16
1276 1284 2.687566 CGGGCCCTAGTCCTTGGT 60.688 66.667 22.43 0.00 34.62 3.67
1292 1300 1.265454 ACTTAGGAAGGAGGTGCCCG 61.265 60.000 0.00 0.00 37.37 6.13
1360 1368 5.011635 TCAGATAAGCAGTACCACACTTCAA 59.988 40.000 0.00 0.00 34.26 2.69
1403 1412 5.240623 AGAGCAGAGTATAAACAGAGGATCG 59.759 44.000 0.00 0.00 42.67 3.69
1455 1464 1.000506 GAGGTTACCAGCACACTTCGA 59.999 52.381 3.51 0.00 0.00 3.71
1547 1556 0.602562 TTGGTTGCCTGCATGTTAGC 59.397 50.000 0.00 0.00 0.00 3.09
1571 1580 0.179018 GGACTGAACCACACTGCCTT 60.179 55.000 0.00 0.00 0.00 4.35
1603 1612 1.837947 TTTGGTTGCCTGCATGCCT 60.838 52.632 16.68 0.00 0.00 4.75
1630 1640 0.458669 CAGCCTCAAATGCACCATCC 59.541 55.000 0.00 0.00 0.00 3.51
1654 1664 6.884836 CCTTCTTAACTTAGCCTGGTTATGTT 59.115 38.462 20.18 20.18 0.00 2.71
1655 1665 6.415573 CCTTCTTAACTTAGCCTGGTTATGT 58.584 40.000 3.70 3.70 0.00 2.29
1673 1683 1.407979 GCTGCATTGCATAGCCTTCTT 59.592 47.619 12.53 0.00 38.13 2.52
1708 1718 1.241315 CCTAGGGCGTGTTTGGTTGG 61.241 60.000 0.00 0.00 0.00 3.77
1733 1743 3.117776 AGGGAACGTTTCTTGGGTAAAGT 60.118 43.478 6.53 0.00 37.18 2.66
1785 2598 4.838423 TGAGTGGTCAAGTTCATCCTCTAA 59.162 41.667 0.00 0.00 0.00 2.10
1795 2608 3.199946 TGGAGACTTTGAGTGGTCAAGTT 59.800 43.478 0.00 0.00 43.66 2.66
1802 2615 3.134458 GTCAGTTGGAGACTTTGAGTGG 58.866 50.000 0.00 0.00 36.10 4.00
1820 2633 2.108157 GCTGTCGTGGTGTGGTCA 59.892 61.111 0.00 0.00 0.00 4.02
1830 2644 1.134901 CGCTAGAGTTCGCTGTCGT 59.865 57.895 0.00 0.00 36.96 4.34
1835 2649 1.803943 CTGGACGCTAGAGTTCGCT 59.196 57.895 0.00 0.00 0.00 4.93
1858 2672 1.709147 AATGCGTCATCGGCTTCTGC 61.709 55.000 0.00 0.00 37.56 4.26
1884 2698 3.891977 CACTCCTCTAGCTTATGCCTACA 59.108 47.826 0.00 0.00 40.80 2.74
1896 2710 2.162608 CCTCGTTGACACACTCCTCTAG 59.837 54.545 0.00 0.00 0.00 2.43
1897 2711 2.160205 CCTCGTTGACACACTCCTCTA 58.840 52.381 0.00 0.00 0.00 2.43
1907 2721 1.181741 AGCTCTCTGCCTCGTTGACA 61.182 55.000 0.00 0.00 44.23 3.58
1908 2722 0.811915 TAGCTCTCTGCCTCGTTGAC 59.188 55.000 0.00 0.00 44.23 3.18
1909 2723 1.545841 TTAGCTCTCTGCCTCGTTGA 58.454 50.000 0.00 0.00 44.23 3.18
1912 2726 1.067495 GTGTTTAGCTCTCTGCCTCGT 60.067 52.381 0.00 0.00 44.23 4.18
1933 2773 2.451490 CTCAGTAGAGTTCCTGCCTCA 58.549 52.381 0.00 0.00 37.11 3.86
1947 2788 4.764050 TTGGAAAGGTGTGAACTCAGTA 57.236 40.909 0.00 0.00 0.00 2.74
1950 2791 7.123547 ACTTTAAATTGGAAAGGTGTGAACTCA 59.876 33.333 14.44 0.00 38.07 3.41
2091 2932 3.369147 CGCCATTGCATGCTAGTATAGAC 59.631 47.826 20.33 0.00 38.07 2.59
2125 2966 3.732048 GGAAGGATCCAAACTAACCCA 57.268 47.619 15.82 0.00 45.79 4.51
2190 3031 2.514824 GACTGGCGGCAGAATCCC 60.515 66.667 41.51 21.19 0.00 3.85
2204 3046 2.582052 TGGTTTTCTTCGCCAATGACT 58.418 42.857 0.00 0.00 0.00 3.41
2214 3056 5.984695 AGCTTTCCCTATTGGTTTTCTTC 57.015 39.130 0.00 0.00 34.77 2.87
2218 3060 5.456042 CCCAAAAGCTTTCCCTATTGGTTTT 60.456 40.000 19.19 0.00 39.60 2.43
2226 3068 0.783850 AGCCCCAAAAGCTTTCCCTA 59.216 50.000 13.10 0.00 37.24 3.53
2235 3077 1.450025 GTTCGTCCTAGCCCCAAAAG 58.550 55.000 0.00 0.00 0.00 2.27
2237 3079 1.128809 TGGTTCGTCCTAGCCCCAAA 61.129 55.000 0.00 0.00 37.07 3.28
2264 3107 2.630580 GGCCTCTATTTGGATCTCGTCT 59.369 50.000 0.00 0.00 0.00 4.18
2265 3108 2.365617 TGGCCTCTATTTGGATCTCGTC 59.634 50.000 3.32 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.