Multiple sequence alignment - TraesCS2B01G200900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G200900 chr2B 100.000 4895 0 0 1 4895 180424787 180419893 0.000000e+00 9040.0
1 TraesCS2B01G200900 chr2B 84.878 205 31 0 233 437 116429021 116428817 1.790000e-49 207.0
2 TraesCS2B01G200900 chr2D 94.964 1688 37 23 2640 4308 126737912 126736254 0.000000e+00 2603.0
3 TraesCS2B01G200900 chr2D 91.433 1179 54 30 570 1716 126739876 126738713 0.000000e+00 1574.0
4 TraesCS2B01G200900 chr2D 93.553 760 25 9 1865 2621 126738636 126737898 0.000000e+00 1110.0
5 TraesCS2B01G200900 chr2D 94.402 393 18 3 4503 4894 126735893 126735504 7.010000e-168 601.0
6 TraesCS2B01G200900 chr2D 90.217 184 7 2 4324 4507 126736106 126735934 3.810000e-56 230.0
7 TraesCS2B01G200900 chr2D 91.509 106 5 3 1860 1962 133769454 133769558 5.110000e-30 143.0
8 TraesCS2B01G200900 chr2A 96.499 1371 36 7 2774 4136 133344778 133343412 0.000000e+00 2255.0
9 TraesCS2B01G200900 chr2A 92.786 998 41 18 727 1716 133346649 133345675 0.000000e+00 1415.0
10 TraesCS2B01G200900 chr2A 93.684 760 21 10 1865 2621 133345598 133344863 0.000000e+00 1112.0
11 TraesCS2B01G200900 chr2A 89.583 336 30 4 4560 4895 133342855 133342525 5.860000e-114 422.0
12 TraesCS2B01G200900 chr2A 90.076 131 7 5 4365 4493 133342979 133342853 1.090000e-36 165.0
13 TraesCS2B01G200900 chr2A 86.719 128 13 2 4128 4255 133343344 133343221 6.610000e-29 139.0
14 TraesCS2B01G200900 chr2A 94.565 92 0 1 2640 2731 133344877 133344791 2.380000e-28 137.0
15 TraesCS2B01G200900 chr2A 88.288 111 5 3 1860 1962 141506361 141506471 5.140000e-25 126.0
16 TraesCS2B01G200900 chr2A 89.320 103 4 4 1863 1959 176673372 176673271 6.650000e-24 122.0
17 TraesCS2B01G200900 chr2A 98.000 50 1 0 1819 1868 712836694 712836645 2.430000e-13 87.9
18 TraesCS2B01G200900 chr3D 94.805 308 14 2 1017 1323 412786139 412785833 3.430000e-131 479.0
19 TraesCS2B01G200900 chr3D 84.177 316 33 9 229 528 554951765 554952079 1.720000e-74 291.0
20 TraesCS2B01G200900 chr3D 76.324 321 32 24 233 549 597927596 597927316 1.110000e-26 132.0
21 TraesCS2B01G200900 chr3B 94.771 306 14 2 1017 1321 539561499 539561195 4.430000e-130 475.0
22 TraesCS2B01G200900 chr3B 81.325 332 41 10 233 546 795918589 795918261 2.930000e-62 250.0
23 TraesCS2B01G200900 chr3B 79.341 334 51 11 229 546 11105161 11104830 8.250000e-53 219.0
24 TraesCS2B01G200900 chr3A 93.291 313 21 0 1011 1323 537507632 537507944 3.450000e-126 462.0
25 TraesCS2B01G200900 chr4A 93.791 306 19 0 1016 1321 409035614 409035919 1.240000e-125 460.0
26 TraesCS2B01G200900 chr4A 80.194 515 85 13 2874 3376 409036677 409037186 2.150000e-98 370.0
27 TraesCS2B01G200900 chr4A 80.769 208 37 3 233 437 118636522 118636729 5.070000e-35 159.0
28 TraesCS2B01G200900 chr4A 80.851 94 11 7 1763 1856 640104037 640104123 3.160000e-07 67.6
29 TraesCS2B01G200900 chr4D 93.506 308 20 0 1014 1321 179312500 179312807 4.470000e-125 459.0
30 TraesCS2B01G200900 chr4D 80.460 522 79 16 2874 3376 179313554 179314071 1.290000e-100 377.0
31 TraesCS2B01G200900 chr4D 88.372 86 9 1 1776 1860 68062088 68062003 8.670000e-18 102.0
32 TraesCS2B01G200900 chr4B 93.182 308 21 0 1014 1321 199190220 199190527 2.080000e-123 453.0
33 TraesCS2B01G200900 chr4B 80.235 511 82 13 2874 3367 199191267 199191775 2.780000e-97 366.0
34 TraesCS2B01G200900 chr6D 82.090 335 43 10 229 546 78348118 78348452 2.250000e-68 270.0
35 TraesCS2B01G200900 chr6D 90.000 110 3 3 1860 1961 65644103 65644212 8.550000e-28 135.0
36 TraesCS2B01G200900 chr7B 78.443 334 53 10 229 546 579442988 579443318 2.990000e-47 200.0
37 TraesCS2B01G200900 chr7B 88.750 80 3 1 1776 1855 747593513 747593586 5.220000e-15 93.5
38 TraesCS2B01G200900 chr6A 78.595 299 42 14 229 511 578046824 578046532 1.400000e-40 178.0
39 TraesCS2B01G200900 chr6A 86.087 115 15 1 433 546 592444526 592444640 6.650000e-24 122.0
40 TraesCS2B01G200900 chr5A 76.615 325 48 9 229 527 1724697 1725019 2.360000e-33 154.0
41 TraesCS2B01G200900 chr5A 84.337 83 6 4 1776 1857 361911514 361911590 1.890000e-09 75.0
42 TraesCS2B01G200900 chr6B 89.720 107 2 5 1863 1961 183308351 183308246 1.430000e-25 128.0
43 TraesCS2B01G200900 chr6B 86.207 116 8 4 1863 1970 209587494 209587379 8.610000e-23 119.0
44 TraesCS2B01G200900 chr5D 84.091 132 15 4 433 560 511825691 511825820 6.650000e-24 122.0
45 TraesCS2B01G200900 chr5D 90.588 85 6 1 1776 1860 13311979 13311897 1.440000e-20 111.0
46 TraesCS2B01G200900 chr1D 91.954 87 5 2 1776 1860 80312931 80312845 2.390000e-23 121.0
47 TraesCS2B01G200900 chr7A 87.273 110 6 3 1863 1965 94784820 94784712 8.610000e-23 119.0
48 TraesCS2B01G200900 chr5B 85.185 81 10 2 1776 1854 705806215 705806295 1.130000e-11 82.4
49 TraesCS2B01G200900 chr1B 84.270 89 8 4 1772 1860 440265460 440265542 1.130000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G200900 chr2B 180419893 180424787 4894 True 9040.000000 9040 100.000000 1 4895 1 chr2B.!!$R2 4894
1 TraesCS2B01G200900 chr2D 126735504 126739876 4372 True 1223.600000 2603 92.913800 570 4894 5 chr2D.!!$R1 4324
2 TraesCS2B01G200900 chr2A 133342525 133346649 4124 True 806.428571 2255 91.987429 727 4895 7 chr2A.!!$R3 4168
3 TraesCS2B01G200900 chr4A 409035614 409037186 1572 False 415.000000 460 86.992500 1016 3376 2 chr4A.!!$F3 2360
4 TraesCS2B01G200900 chr4D 179312500 179314071 1571 False 418.000000 459 86.983000 1014 3376 2 chr4D.!!$F1 2362
5 TraesCS2B01G200900 chr4B 199190220 199191775 1555 False 409.500000 453 86.708500 1014 3367 2 chr4B.!!$F1 2353

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
299 300 0.027455 CGTTTTTGTGCGCAGAGACA 59.973 50.0 12.22 1.08 0.0 3.41 F
521 522 0.038526 AGAATTATACCGCGCCGAGG 60.039 55.0 4.98 4.98 0.0 4.63 F
601 602 0.106769 TGCTGGCTGACTTGTCCAAA 60.107 50.0 0.00 0.00 0.0 3.28 F
1997 2066 0.106719 CCACACTGGTTTGGTCCTGT 60.107 55.0 0.00 0.00 39.6 4.00 F
2483 2779 0.976073 CACGTGAGGGTCCCACCTAT 60.976 60.0 10.90 0.00 42.1 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1781 1847 0.107848 AGTCGCCTATTTTGGGACGG 60.108 55.000 0.00 0.00 34.61 4.79 R
1782 1848 1.287425 GAGTCGCCTATTTTGGGACG 58.713 55.000 0.00 0.00 34.61 4.79 R
1999 2068 2.163010 CCAACTGCAAGCAATACAGGAG 59.837 50.000 0.00 0.00 37.60 3.69 R
2826 3125 1.000506 CAATGGGCTAATGGCATCTGC 59.999 52.381 13.91 13.91 44.01 4.26 R
4356 4940 0.517316 GCTCGTGTTGGCGATCTTTT 59.483 50.000 0.00 0.00 40.29 2.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.708948 TGAAAGATGTAAAATTTCAGGCCG 58.291 37.500 0.00 0.00 37.86 6.13
25 26 3.782889 AGATGTAAAATTTCAGGCCGC 57.217 42.857 0.00 0.00 0.00 6.53
26 27 3.356290 AGATGTAAAATTTCAGGCCGCT 58.644 40.909 0.00 0.00 0.00 5.52
27 28 3.129287 AGATGTAAAATTTCAGGCCGCTG 59.871 43.478 0.00 0.00 0.00 5.18
28 29 2.235016 TGTAAAATTTCAGGCCGCTGT 58.765 42.857 0.00 0.00 0.00 4.40
29 30 3.413327 TGTAAAATTTCAGGCCGCTGTA 58.587 40.909 0.00 0.00 0.00 2.74
30 31 3.821600 TGTAAAATTTCAGGCCGCTGTAA 59.178 39.130 0.00 0.00 0.00 2.41
31 32 4.278669 TGTAAAATTTCAGGCCGCTGTAAA 59.721 37.500 0.00 0.00 0.00 2.01
32 33 4.535526 AAAATTTCAGGCCGCTGTAAAT 57.464 36.364 0.00 0.00 0.00 1.40
33 34 5.652994 AAAATTTCAGGCCGCTGTAAATA 57.347 34.783 0.00 0.00 0.00 1.40
34 35 5.652994 AAATTTCAGGCCGCTGTAAATAA 57.347 34.783 0.00 0.00 0.00 1.40
35 36 5.652994 AATTTCAGGCCGCTGTAAATAAA 57.347 34.783 0.00 0.00 0.00 1.40
36 37 5.852282 ATTTCAGGCCGCTGTAAATAAAT 57.148 34.783 0.00 0.00 0.00 1.40
37 38 5.652994 TTTCAGGCCGCTGTAAATAAATT 57.347 34.783 0.00 0.00 0.00 1.82
38 39 4.630894 TCAGGCCGCTGTAAATAAATTG 57.369 40.909 0.00 0.00 0.00 2.32
39 40 3.115554 CAGGCCGCTGTAAATAAATTGC 58.884 45.455 0.00 0.00 0.00 3.56
40 41 2.100749 AGGCCGCTGTAAATAAATTGCC 59.899 45.455 0.00 0.00 36.62 4.52
41 42 2.159170 GGCCGCTGTAAATAAATTGCCA 60.159 45.455 0.00 0.00 36.40 4.92
42 43 3.492482 GGCCGCTGTAAATAAATTGCCAT 60.492 43.478 0.00 0.00 36.40 4.40
43 44 3.490526 GCCGCTGTAAATAAATTGCCATG 59.509 43.478 0.00 0.00 0.00 3.66
44 45 4.736168 GCCGCTGTAAATAAATTGCCATGA 60.736 41.667 0.00 0.00 0.00 3.07
45 46 5.531634 CCGCTGTAAATAAATTGCCATGAT 58.468 37.500 0.00 0.00 0.00 2.45
46 47 5.984926 CCGCTGTAAATAAATTGCCATGATT 59.015 36.000 0.00 0.00 0.00 2.57
47 48 6.479660 CCGCTGTAAATAAATTGCCATGATTT 59.520 34.615 0.00 0.00 0.00 2.17
48 49 7.651304 CCGCTGTAAATAAATTGCCATGATTTA 59.349 33.333 0.00 0.00 34.51 1.40
49 50 9.195411 CGCTGTAAATAAATTGCCATGATTTAT 57.805 29.630 0.00 0.00 39.90 1.40
61 62 9.816354 ATTGCCATGATTTATTAGTTACCAAAC 57.184 29.630 0.00 0.00 35.72 2.93
62 63 8.354711 TGCCATGATTTATTAGTTACCAAACA 57.645 30.769 0.00 0.00 38.12 2.83
63 64 8.465999 TGCCATGATTTATTAGTTACCAAACAG 58.534 33.333 0.00 0.00 38.12 3.16
64 65 8.682710 GCCATGATTTATTAGTTACCAAACAGA 58.317 33.333 0.00 0.00 38.12 3.41
77 78 8.270030 AGTTACCAAACAGAATATAGGTTACCC 58.730 37.037 0.00 0.00 38.12 3.69
78 79 6.009908 ACCAAACAGAATATAGGTTACCCC 57.990 41.667 0.00 0.00 0.00 4.95
79 80 5.493250 ACCAAACAGAATATAGGTTACCCCA 59.507 40.000 0.00 0.00 34.66 4.96
80 81 5.826208 CCAAACAGAATATAGGTTACCCCAC 59.174 44.000 0.00 0.00 34.66 4.61
81 82 5.641789 AACAGAATATAGGTTACCCCACC 57.358 43.478 0.00 0.00 37.04 4.61
82 83 3.978672 ACAGAATATAGGTTACCCCACCC 59.021 47.826 0.00 0.00 37.58 4.61
83 84 3.007614 CAGAATATAGGTTACCCCACCCG 59.992 52.174 0.00 0.00 37.58 5.28
84 85 3.116629 AGAATATAGGTTACCCCACCCGA 60.117 47.826 0.00 0.00 37.58 5.14
85 86 3.572661 ATATAGGTTACCCCACCCGAT 57.427 47.619 0.00 0.00 37.58 4.18
86 87 2.201523 ATAGGTTACCCCACCCGATT 57.798 50.000 0.00 0.00 37.58 3.34
87 88 1.205966 TAGGTTACCCCACCCGATTG 58.794 55.000 0.00 0.00 37.58 2.67
88 89 0.548197 AGGTTACCCCACCCGATTGA 60.548 55.000 0.00 0.00 37.58 2.57
89 90 0.549469 GGTTACCCCACCCGATTGAT 59.451 55.000 0.00 0.00 0.00 2.57
90 91 1.770061 GGTTACCCCACCCGATTGATA 59.230 52.381 0.00 0.00 0.00 2.15
91 92 2.374170 GGTTACCCCACCCGATTGATAT 59.626 50.000 0.00 0.00 0.00 1.63
92 93 3.408634 GTTACCCCACCCGATTGATATG 58.591 50.000 0.00 0.00 0.00 1.78
93 94 1.518367 ACCCCACCCGATTGATATGT 58.482 50.000 0.00 0.00 0.00 2.29
94 95 2.696775 ACCCCACCCGATTGATATGTA 58.303 47.619 0.00 0.00 0.00 2.29
95 96 2.370849 ACCCCACCCGATTGATATGTAC 59.629 50.000 0.00 0.00 0.00 2.90
96 97 2.370519 CCCCACCCGATTGATATGTACA 59.629 50.000 0.00 0.00 0.00 2.90
97 98 3.181449 CCCCACCCGATTGATATGTACAA 60.181 47.826 0.00 0.00 0.00 2.41
98 99 4.506625 CCCCACCCGATTGATATGTACAAT 60.507 45.833 0.00 0.00 40.08 2.71
99 100 5.070001 CCCACCCGATTGATATGTACAATT 58.930 41.667 0.00 0.00 37.96 2.32
100 101 5.048782 CCCACCCGATTGATATGTACAATTG 60.049 44.000 3.24 3.24 37.96 2.32
101 102 5.451908 CACCCGATTGATATGTACAATTGC 58.548 41.667 5.05 0.00 37.96 3.56
102 103 4.518970 ACCCGATTGATATGTACAATTGCC 59.481 41.667 5.05 0.00 37.96 4.52
103 104 4.082787 CCCGATTGATATGTACAATTGCCC 60.083 45.833 5.05 0.00 37.96 5.36
104 105 4.761739 CCGATTGATATGTACAATTGCCCT 59.238 41.667 5.05 0.00 37.96 5.19
105 106 5.937540 CCGATTGATATGTACAATTGCCCTA 59.062 40.000 5.05 0.00 37.96 3.53
106 107 6.128282 CCGATTGATATGTACAATTGCCCTAC 60.128 42.308 5.05 1.54 37.96 3.18
107 108 6.128282 CGATTGATATGTACAATTGCCCTACC 60.128 42.308 5.05 0.00 37.96 3.18
108 109 4.637276 TGATATGTACAATTGCCCTACCG 58.363 43.478 5.05 0.00 0.00 4.02
109 110 4.345547 TGATATGTACAATTGCCCTACCGA 59.654 41.667 5.05 0.00 0.00 4.69
110 111 3.857157 ATGTACAATTGCCCTACCGAT 57.143 42.857 5.05 0.00 0.00 4.18
111 112 3.637911 TGTACAATTGCCCTACCGATT 57.362 42.857 5.05 0.00 0.00 3.34
112 113 3.958018 TGTACAATTGCCCTACCGATTT 58.042 40.909 5.05 0.00 0.00 2.17
113 114 3.692101 TGTACAATTGCCCTACCGATTTG 59.308 43.478 5.05 0.00 0.00 2.32
114 115 3.080300 ACAATTGCCCTACCGATTTGA 57.920 42.857 5.05 0.00 0.00 2.69
115 116 3.631250 ACAATTGCCCTACCGATTTGAT 58.369 40.909 5.05 0.00 0.00 2.57
116 117 4.023291 ACAATTGCCCTACCGATTTGATT 58.977 39.130 5.05 0.00 0.00 2.57
117 118 4.466015 ACAATTGCCCTACCGATTTGATTT 59.534 37.500 5.05 0.00 0.00 2.17
118 119 4.654091 ATTGCCCTACCGATTTGATTTG 57.346 40.909 0.00 0.00 0.00 2.32
119 120 3.358111 TGCCCTACCGATTTGATTTGA 57.642 42.857 0.00 0.00 0.00 2.69
120 121 3.278574 TGCCCTACCGATTTGATTTGAG 58.721 45.455 0.00 0.00 0.00 3.02
121 122 2.618709 GCCCTACCGATTTGATTTGAGG 59.381 50.000 0.00 0.00 0.00 3.86
122 123 3.684413 GCCCTACCGATTTGATTTGAGGA 60.684 47.826 0.00 0.00 0.00 3.71
123 124 4.718961 CCCTACCGATTTGATTTGAGGAT 58.281 43.478 0.00 0.00 0.00 3.24
124 125 5.744887 GCCCTACCGATTTGATTTGAGGATA 60.745 44.000 0.00 0.00 0.00 2.59
125 126 6.296026 CCCTACCGATTTGATTTGAGGATAA 58.704 40.000 0.00 0.00 0.00 1.75
126 127 6.942576 CCCTACCGATTTGATTTGAGGATAAT 59.057 38.462 0.00 0.00 0.00 1.28
127 128 7.119846 CCCTACCGATTTGATTTGAGGATAATC 59.880 40.741 0.00 0.00 0.00 1.75
128 129 6.545504 ACCGATTTGATTTGAGGATAATCG 57.454 37.500 0.00 0.00 0.00 3.34
129 130 5.931532 CCGATTTGATTTGAGGATAATCGG 58.068 41.667 16.53 16.53 40.73 4.18
130 131 5.106555 CCGATTTGATTTGAGGATAATCGGG 60.107 44.000 20.47 7.34 42.29 5.14
131 132 5.617751 CGATTTGATTTGAGGATAATCGGGC 60.618 44.000 0.00 0.00 0.00 6.13
132 133 2.766313 TGATTTGAGGATAATCGGGCG 58.234 47.619 0.00 0.00 0.00 6.13
133 134 2.367241 TGATTTGAGGATAATCGGGCGA 59.633 45.455 0.00 0.00 0.00 5.54
134 135 2.526304 TTTGAGGATAATCGGGCGAG 57.474 50.000 0.00 0.00 0.00 5.03
135 136 0.679505 TTGAGGATAATCGGGCGAGG 59.320 55.000 0.00 0.00 0.00 4.63
136 137 0.469331 TGAGGATAATCGGGCGAGGT 60.469 55.000 0.00 0.00 0.00 3.85
137 138 1.202964 TGAGGATAATCGGGCGAGGTA 60.203 52.381 0.00 0.00 0.00 3.08
138 139 1.891150 GAGGATAATCGGGCGAGGTAA 59.109 52.381 0.00 0.00 0.00 2.85
139 140 2.298163 GAGGATAATCGGGCGAGGTAAA 59.702 50.000 0.00 0.00 0.00 2.01
140 141 2.701951 AGGATAATCGGGCGAGGTAAAA 59.298 45.455 0.00 0.00 0.00 1.52
141 142 3.135167 AGGATAATCGGGCGAGGTAAAAA 59.865 43.478 0.00 0.00 0.00 1.94
159 160 1.616159 AAAAACTCGGATGTGGGGTG 58.384 50.000 0.00 0.00 0.00 4.61
160 161 0.251165 AAAACTCGGATGTGGGGTGG 60.251 55.000 0.00 0.00 0.00 4.61
161 162 2.137177 AAACTCGGATGTGGGGTGGG 62.137 60.000 0.00 0.00 0.00 4.61
162 163 3.797353 CTCGGATGTGGGGTGGGG 61.797 72.222 0.00 0.00 0.00 4.96
163 164 4.667935 TCGGATGTGGGGTGGGGT 62.668 66.667 0.00 0.00 0.00 4.95
164 165 4.424711 CGGATGTGGGGTGGGGTG 62.425 72.222 0.00 0.00 0.00 4.61
165 166 2.938798 GGATGTGGGGTGGGGTGA 60.939 66.667 0.00 0.00 0.00 4.02
166 167 2.677228 GATGTGGGGTGGGGTGAG 59.323 66.667 0.00 0.00 0.00 3.51
167 168 2.121506 ATGTGGGGTGGGGTGAGT 60.122 61.111 0.00 0.00 0.00 3.41
168 169 2.484287 GATGTGGGGTGGGGTGAGTG 62.484 65.000 0.00 0.00 0.00 3.51
169 170 3.175710 GTGGGGTGGGGTGAGTGT 61.176 66.667 0.00 0.00 0.00 3.55
170 171 2.369015 TGGGGTGGGGTGAGTGTT 60.369 61.111 0.00 0.00 0.00 3.32
171 172 2.009882 TGGGGTGGGGTGAGTGTTT 61.010 57.895 0.00 0.00 0.00 2.83
172 173 1.228459 GGGGTGGGGTGAGTGTTTC 60.228 63.158 0.00 0.00 0.00 2.78
173 174 1.534697 GGGTGGGGTGAGTGTTTCA 59.465 57.895 0.00 0.00 0.00 2.69
174 175 0.112412 GGGTGGGGTGAGTGTTTCAT 59.888 55.000 0.00 0.00 38.29 2.57
175 176 1.247567 GGTGGGGTGAGTGTTTCATG 58.752 55.000 0.00 0.00 38.29 3.07
176 177 1.247567 GTGGGGTGAGTGTTTCATGG 58.752 55.000 0.00 0.00 38.29 3.66
177 178 0.112218 TGGGGTGAGTGTTTCATGGG 59.888 55.000 0.00 0.00 38.29 4.00
178 179 1.250840 GGGGTGAGTGTTTCATGGGC 61.251 60.000 0.00 0.00 38.29 5.36
179 180 1.586154 GGGTGAGTGTTTCATGGGCG 61.586 60.000 0.00 0.00 38.29 6.13
180 181 0.889186 GGTGAGTGTTTCATGGGCGT 60.889 55.000 0.00 0.00 38.29 5.68
181 182 0.238289 GTGAGTGTTTCATGGGCGTG 59.762 55.000 0.00 0.00 38.29 5.34
182 183 0.888736 TGAGTGTTTCATGGGCGTGG 60.889 55.000 0.00 0.00 0.00 4.94
183 184 1.586154 GAGTGTTTCATGGGCGTGGG 61.586 60.000 0.00 0.00 0.00 4.61
184 185 1.602323 GTGTTTCATGGGCGTGGGA 60.602 57.895 0.00 0.00 0.00 4.37
185 186 1.151679 TGTTTCATGGGCGTGGGAA 59.848 52.632 0.00 0.00 0.00 3.97
186 187 0.893270 TGTTTCATGGGCGTGGGAAG 60.893 55.000 0.00 0.00 0.00 3.46
187 188 1.304052 TTTCATGGGCGTGGGAAGG 60.304 57.895 0.00 0.00 0.00 3.46
188 189 2.779742 TTTCATGGGCGTGGGAAGGG 62.780 60.000 0.00 0.00 0.00 3.95
189 190 4.820744 CATGGGCGTGGGAAGGGG 62.821 72.222 0.00 0.00 0.00 4.79
205 206 3.810255 GGGGGTAGTTGGACGGAA 58.190 61.111 0.00 0.00 0.00 4.30
206 207 1.600638 GGGGGTAGTTGGACGGAAG 59.399 63.158 0.00 0.00 0.00 3.46
207 208 0.906282 GGGGGTAGTTGGACGGAAGA 60.906 60.000 0.00 0.00 0.00 2.87
208 209 1.201424 GGGGTAGTTGGACGGAAGAT 58.799 55.000 0.00 0.00 0.00 2.40
209 210 1.134491 GGGGTAGTTGGACGGAAGATG 60.134 57.143 0.00 0.00 0.00 2.90
210 211 1.829222 GGGTAGTTGGACGGAAGATGA 59.171 52.381 0.00 0.00 0.00 2.92
211 212 2.159085 GGGTAGTTGGACGGAAGATGAG 60.159 54.545 0.00 0.00 0.00 2.90
212 213 2.758979 GGTAGTTGGACGGAAGATGAGA 59.241 50.000 0.00 0.00 0.00 3.27
213 214 3.385111 GGTAGTTGGACGGAAGATGAGAT 59.615 47.826 0.00 0.00 0.00 2.75
214 215 3.533606 AGTTGGACGGAAGATGAGATG 57.466 47.619 0.00 0.00 0.00 2.90
215 216 2.169352 AGTTGGACGGAAGATGAGATGG 59.831 50.000 0.00 0.00 0.00 3.51
216 217 2.159179 TGGACGGAAGATGAGATGGA 57.841 50.000 0.00 0.00 0.00 3.41
217 218 1.757118 TGGACGGAAGATGAGATGGAC 59.243 52.381 0.00 0.00 0.00 4.02
218 219 1.269309 GGACGGAAGATGAGATGGACG 60.269 57.143 0.00 0.00 0.00 4.79
219 220 1.676529 GACGGAAGATGAGATGGACGA 59.323 52.381 0.00 0.00 0.00 4.20
220 221 1.405821 ACGGAAGATGAGATGGACGAC 59.594 52.381 0.00 0.00 0.00 4.34
221 222 1.405463 CGGAAGATGAGATGGACGACA 59.595 52.381 0.00 0.00 0.00 4.35
222 223 2.542618 CGGAAGATGAGATGGACGACAG 60.543 54.545 0.00 0.00 0.00 3.51
223 224 2.690497 GGAAGATGAGATGGACGACAGA 59.310 50.000 0.00 0.00 0.00 3.41
224 225 3.131223 GGAAGATGAGATGGACGACAGAA 59.869 47.826 0.00 0.00 0.00 3.02
225 226 3.791973 AGATGAGATGGACGACAGAAC 57.208 47.619 0.00 0.00 0.00 3.01
226 227 2.098280 AGATGAGATGGACGACAGAACG 59.902 50.000 0.00 0.00 39.31 3.95
228 229 1.611977 TGAGATGGACGACAGAACGTT 59.388 47.619 0.00 0.00 46.52 3.99
229 230 2.815503 TGAGATGGACGACAGAACGTTA 59.184 45.455 0.00 0.00 46.52 3.18
230 231 3.253921 TGAGATGGACGACAGAACGTTAA 59.746 43.478 0.00 0.00 46.52 2.01
231 232 4.232221 GAGATGGACGACAGAACGTTAAA 58.768 43.478 0.00 0.00 46.52 1.52
232 233 4.624015 AGATGGACGACAGAACGTTAAAA 58.376 39.130 0.00 0.00 46.52 1.52
233 234 4.684703 AGATGGACGACAGAACGTTAAAAG 59.315 41.667 0.00 0.00 46.52 2.27
234 235 2.540931 TGGACGACAGAACGTTAAAAGC 59.459 45.455 0.00 0.00 46.52 3.51
235 236 2.540931 GGACGACAGAACGTTAAAAGCA 59.459 45.455 0.00 0.00 46.52 3.91
236 237 3.185797 GGACGACAGAACGTTAAAAGCAT 59.814 43.478 0.00 0.00 46.52 3.79
237 238 4.383679 GACGACAGAACGTTAAAAGCATC 58.616 43.478 0.00 0.00 46.52 3.91
238 239 4.056050 ACGACAGAACGTTAAAAGCATCT 58.944 39.130 0.00 0.00 44.14 2.90
239 240 4.150098 ACGACAGAACGTTAAAAGCATCTC 59.850 41.667 0.00 0.00 44.14 2.75
240 241 4.434330 CGACAGAACGTTAAAAGCATCTCC 60.434 45.833 0.00 0.00 0.00 3.71
241 242 4.385825 ACAGAACGTTAAAAGCATCTCCA 58.614 39.130 0.00 0.00 0.00 3.86
242 243 4.819630 ACAGAACGTTAAAAGCATCTCCAA 59.180 37.500 0.00 0.00 0.00 3.53
243 244 5.473504 ACAGAACGTTAAAAGCATCTCCAAT 59.526 36.000 0.00 0.00 0.00 3.16
244 245 6.653320 ACAGAACGTTAAAAGCATCTCCAATA 59.347 34.615 0.00 0.00 0.00 1.90
245 246 7.148407 ACAGAACGTTAAAAGCATCTCCAATAG 60.148 37.037 0.00 0.00 0.00 1.73
246 247 6.316390 AGAACGTTAAAAGCATCTCCAATAGG 59.684 38.462 0.00 0.00 0.00 2.57
247 248 4.335594 ACGTTAAAAGCATCTCCAATAGGC 59.664 41.667 0.00 0.00 33.74 3.93
248 249 4.552767 CGTTAAAAGCATCTCCAATAGGCG 60.553 45.833 0.00 0.00 33.74 5.52
249 250 1.312815 AAAGCATCTCCAATAGGCGC 58.687 50.000 0.00 0.00 33.74 6.53
250 251 0.471617 AAGCATCTCCAATAGGCGCT 59.528 50.000 7.64 0.00 35.42 5.92
251 252 0.034616 AGCATCTCCAATAGGCGCTC 59.965 55.000 7.64 0.00 30.12 5.03
252 253 0.250038 GCATCTCCAATAGGCGCTCA 60.250 55.000 7.64 0.00 33.74 4.26
253 254 1.811558 GCATCTCCAATAGGCGCTCAA 60.812 52.381 7.64 0.00 33.74 3.02
254 255 2.564771 CATCTCCAATAGGCGCTCAAA 58.435 47.619 7.64 0.00 33.74 2.69
255 256 2.779755 TCTCCAATAGGCGCTCAAAA 57.220 45.000 7.64 0.00 33.74 2.44
256 257 3.066291 TCTCCAATAGGCGCTCAAAAA 57.934 42.857 7.64 0.00 33.74 1.94
270 271 3.354678 AAAAATGCCTCACGCGCT 58.645 50.000 5.73 0.00 42.08 5.92
271 272 2.550487 AAAAATGCCTCACGCGCTA 58.450 47.368 5.73 0.00 42.08 4.26
272 273 0.878416 AAAAATGCCTCACGCGCTAA 59.122 45.000 5.73 0.00 42.08 3.09
273 274 0.878416 AAAATGCCTCACGCGCTAAA 59.122 45.000 5.73 0.00 42.08 1.85
274 275 0.878416 AAATGCCTCACGCGCTAAAA 59.122 45.000 5.73 0.00 42.08 1.52
275 276 0.878416 AATGCCTCACGCGCTAAAAA 59.122 45.000 5.73 0.00 42.08 1.94
276 277 1.094785 ATGCCTCACGCGCTAAAAAT 58.905 45.000 5.73 0.00 42.08 1.82
277 278 1.728068 TGCCTCACGCGCTAAAAATA 58.272 45.000 5.73 0.00 42.08 1.40
278 279 2.077627 TGCCTCACGCGCTAAAAATAA 58.922 42.857 5.73 0.00 42.08 1.40
279 280 2.680841 TGCCTCACGCGCTAAAAATAAT 59.319 40.909 5.73 0.00 42.08 1.28
280 281 3.242608 TGCCTCACGCGCTAAAAATAATC 60.243 43.478 5.73 0.00 42.08 1.75
281 282 3.531982 CCTCACGCGCTAAAAATAATCG 58.468 45.455 5.73 0.00 0.00 3.34
282 283 3.000925 CCTCACGCGCTAAAAATAATCGT 59.999 43.478 5.73 0.00 0.00 3.73
283 284 4.493545 CCTCACGCGCTAAAAATAATCGTT 60.494 41.667 5.73 0.00 0.00 3.85
284 285 4.960329 TCACGCGCTAAAAATAATCGTTT 58.040 34.783 5.73 0.00 0.00 3.60
285 286 5.383958 TCACGCGCTAAAAATAATCGTTTT 58.616 33.333 5.73 0.00 32.94 2.43
286 287 5.852229 TCACGCGCTAAAAATAATCGTTTTT 59.148 32.000 5.73 3.30 42.25 1.94
287 288 5.937982 CACGCGCTAAAAATAATCGTTTTTG 59.062 36.000 5.73 0.00 40.43 2.44
288 289 5.626132 ACGCGCTAAAAATAATCGTTTTTGT 59.374 32.000 5.73 0.00 40.43 2.83
289 290 5.937982 CGCGCTAAAAATAATCGTTTTTGTG 59.062 36.000 5.56 2.84 40.43 3.33
290 291 5.721690 GCGCTAAAAATAATCGTTTTTGTGC 59.278 36.000 0.00 11.62 43.97 4.57
291 292 5.937982 CGCTAAAAATAATCGTTTTTGTGCG 59.062 36.000 20.41 20.41 45.80 5.34
292 293 5.721690 GCTAAAAATAATCGTTTTTGTGCGC 59.278 36.000 0.00 0.00 40.43 6.09
293 294 5.643339 AAAAATAATCGTTTTTGTGCGCA 57.357 30.435 5.66 5.66 39.20 6.09
294 295 4.884257 AAATAATCGTTTTTGTGCGCAG 57.116 36.364 12.22 0.00 0.00 5.18
295 296 3.822594 ATAATCGTTTTTGTGCGCAGA 57.177 38.095 12.22 6.80 0.00 4.26
296 297 2.036556 AATCGTTTTTGTGCGCAGAG 57.963 45.000 12.22 0.00 0.00 3.35
297 298 1.225855 ATCGTTTTTGTGCGCAGAGA 58.774 45.000 12.22 0.09 0.00 3.10
298 299 0.303493 TCGTTTTTGTGCGCAGAGAC 59.697 50.000 12.22 9.03 0.00 3.36
299 300 0.027455 CGTTTTTGTGCGCAGAGACA 59.973 50.000 12.22 1.08 0.00 3.41
300 301 1.746760 GTTTTTGTGCGCAGAGACAG 58.253 50.000 12.22 0.00 0.00 3.51
301 302 1.330521 GTTTTTGTGCGCAGAGACAGA 59.669 47.619 12.22 0.00 0.00 3.41
302 303 1.662517 TTTTGTGCGCAGAGACAGAA 58.337 45.000 12.22 3.65 0.00 3.02
303 304 1.662517 TTTGTGCGCAGAGACAGAAA 58.337 45.000 12.22 0.00 0.00 2.52
304 305 1.662517 TTGTGCGCAGAGACAGAAAA 58.337 45.000 12.22 0.00 0.00 2.29
305 306 0.937304 TGTGCGCAGAGACAGAAAAC 59.063 50.000 12.22 0.00 0.00 2.43
306 307 0.937304 GTGCGCAGAGACAGAAAACA 59.063 50.000 12.22 0.00 0.00 2.83
307 308 1.070309 GTGCGCAGAGACAGAAAACAG 60.070 52.381 12.22 0.00 0.00 3.16
308 309 0.110464 GCGCAGAGACAGAAAACAGC 60.110 55.000 0.30 0.00 0.00 4.40
309 310 0.162507 CGCAGAGACAGAAAACAGCG 59.837 55.000 0.00 0.00 37.91 5.18
310 311 0.110464 GCAGAGACAGAAAACAGCGC 60.110 55.000 0.00 0.00 0.00 5.92
311 312 1.506493 CAGAGACAGAAAACAGCGCT 58.494 50.000 2.64 2.64 0.00 5.92
312 313 1.869767 CAGAGACAGAAAACAGCGCTT 59.130 47.619 7.50 0.00 0.00 4.68
313 314 2.096516 CAGAGACAGAAAACAGCGCTTC 60.097 50.000 7.50 2.00 0.00 3.86
314 315 1.867233 GAGACAGAAAACAGCGCTTCA 59.133 47.619 7.50 0.00 0.00 3.02
315 316 1.869767 AGACAGAAAACAGCGCTTCAG 59.130 47.619 7.50 1.77 0.00 3.02
316 317 0.308993 ACAGAAAACAGCGCTTCAGC 59.691 50.000 7.50 0.00 37.78 4.26
324 325 2.171940 GCGCTTCAGCTGACGTTG 59.828 61.111 18.03 12.59 39.32 4.10
325 326 2.598632 GCGCTTCAGCTGACGTTGT 61.599 57.895 18.03 0.00 39.32 3.32
326 327 1.282248 GCGCTTCAGCTGACGTTGTA 61.282 55.000 18.03 0.00 39.32 2.41
327 328 1.136690 CGCTTCAGCTGACGTTGTAA 58.863 50.000 18.03 0.00 39.32 2.41
328 329 1.525197 CGCTTCAGCTGACGTTGTAAA 59.475 47.619 18.03 0.00 39.32 2.01
329 330 2.033236 CGCTTCAGCTGACGTTGTAAAA 60.033 45.455 18.03 0.00 39.32 1.52
330 331 3.363970 CGCTTCAGCTGACGTTGTAAAAT 60.364 43.478 18.03 0.00 39.32 1.82
331 332 4.143200 CGCTTCAGCTGACGTTGTAAAATA 60.143 41.667 18.03 0.00 39.32 1.40
332 333 5.316770 GCTTCAGCTGACGTTGTAAAATAG 58.683 41.667 18.03 7.60 38.21 1.73
333 334 5.120208 GCTTCAGCTGACGTTGTAAAATAGA 59.880 40.000 18.03 0.00 38.21 1.98
334 335 6.670927 GCTTCAGCTGACGTTGTAAAATAGAG 60.671 42.308 18.03 6.92 38.21 2.43
335 336 4.625742 TCAGCTGACGTTGTAAAATAGAGC 59.374 41.667 13.74 0.00 0.00 4.09
336 337 3.612860 AGCTGACGTTGTAAAATAGAGCG 59.387 43.478 0.00 0.00 0.00 5.03
337 338 3.781280 GCTGACGTTGTAAAATAGAGCGC 60.781 47.826 0.00 0.00 0.00 5.92
338 339 2.343246 TGACGTTGTAAAATAGAGCGCG 59.657 45.455 0.00 0.00 0.00 6.86
339 340 1.060122 ACGTTGTAAAATAGAGCGCGC 59.940 47.619 26.66 26.66 0.00 6.86
340 341 1.059979 CGTTGTAAAATAGAGCGCGCA 59.940 47.619 35.10 13.97 0.00 6.09
341 342 2.428114 GTTGTAAAATAGAGCGCGCAC 58.572 47.619 35.10 28.25 0.00 5.34
342 343 1.715993 TGTAAAATAGAGCGCGCACA 58.284 45.000 35.10 22.58 0.00 4.57
343 344 2.070028 TGTAAAATAGAGCGCGCACAA 58.930 42.857 35.10 18.00 0.00 3.33
344 345 2.480802 TGTAAAATAGAGCGCGCACAAA 59.519 40.909 35.10 19.54 0.00 2.83
345 346 2.697431 AAAATAGAGCGCGCACAAAA 57.303 40.000 35.10 16.86 0.00 2.44
346 347 2.697431 AAATAGAGCGCGCACAAAAA 57.303 40.000 35.10 14.22 0.00 1.94
347 348 2.247311 AATAGAGCGCGCACAAAAAG 57.753 45.000 35.10 0.00 0.00 2.27
348 349 1.156736 ATAGAGCGCGCACAAAAAGT 58.843 45.000 35.10 9.89 0.00 2.66
349 350 0.941542 TAGAGCGCGCACAAAAAGTT 59.058 45.000 35.10 8.99 0.00 2.66
350 351 0.100503 AGAGCGCGCACAAAAAGTTT 59.899 45.000 35.10 8.08 0.00 2.66
351 352 0.920664 GAGCGCGCACAAAAAGTTTT 59.079 45.000 35.10 7.44 0.00 2.43
352 353 2.113289 GAGCGCGCACAAAAAGTTTTA 58.887 42.857 35.10 0.00 0.00 1.52
353 354 2.116366 AGCGCGCACAAAAAGTTTTAG 58.884 42.857 35.10 0.00 0.00 1.85
354 355 1.395449 GCGCGCACAAAAAGTTTTAGC 60.395 47.619 29.10 5.87 0.00 3.09
355 356 1.137287 CGCGCACAAAAAGTTTTAGCG 60.137 47.619 25.60 25.60 46.84 4.26
356 357 1.849829 GCGCACAAAAAGTTTTAGCGT 59.150 42.857 27.91 14.49 46.33 5.07
357 358 3.037324 GCGCACAAAAAGTTTTAGCGTA 58.963 40.909 27.91 0.00 46.33 4.42
358 359 3.121927 GCGCACAAAAAGTTTTAGCGTAC 60.122 43.478 27.91 17.12 46.33 3.67
359 360 3.115098 CGCACAAAAAGTTTTAGCGTACG 59.885 43.478 23.40 11.84 43.05 3.67
360 361 3.419596 GCACAAAAAGTTTTAGCGTACGG 59.580 43.478 18.39 0.00 0.00 4.02
361 362 3.969981 CACAAAAAGTTTTAGCGTACGGG 59.030 43.478 18.39 0.00 0.00 5.28
362 363 2.975193 CAAAAAGTTTTAGCGTACGGGC 59.025 45.455 18.39 0.27 0.00 6.13
363 364 0.792031 AAAGTTTTAGCGTACGGGCG 59.208 50.000 18.39 0.00 38.18 6.13
364 365 0.319813 AAGTTTTAGCGTACGGGCGT 60.320 50.000 18.39 0.00 38.18 5.68
365 366 1.010419 AGTTTTAGCGTACGGGCGTG 61.010 55.000 18.39 0.00 38.18 5.34
366 367 2.381967 TTTTAGCGTACGGGCGTGC 61.382 57.895 18.39 0.00 38.18 5.34
393 394 1.144969 CTGCTGTGCTGCAAATTTGG 58.855 50.000 19.47 5.27 42.83 3.28
394 395 0.249953 TGCTGTGCTGCAAATTTGGG 60.250 50.000 19.47 0.00 40.29 4.12
395 396 0.952010 GCTGTGCTGCAAATTTGGGG 60.952 55.000 19.47 0.00 0.00 4.96
396 397 0.952010 CTGTGCTGCAAATTTGGGGC 60.952 55.000 19.47 6.19 0.00 5.80
397 398 2.028733 GTGCTGCAAATTTGGGGCG 61.029 57.895 19.47 3.96 0.00 6.13
398 399 3.120385 GCTGCAAATTTGGGGCGC 61.120 61.111 19.47 0.00 0.00 6.53
399 400 2.434709 CTGCAAATTTGGGGCGCC 60.435 61.111 21.18 21.18 0.00 6.53
400 401 4.370066 TGCAAATTTGGGGCGCCG 62.370 61.111 22.54 4.62 0.00 6.46
402 403 3.377759 CAAATTTGGGGCGCCGGA 61.378 61.111 22.54 6.05 0.00 5.14
403 404 2.363665 AAATTTGGGGCGCCGGAT 60.364 55.556 22.54 8.53 0.00 4.18
404 405 1.987306 AAATTTGGGGCGCCGGATT 60.987 52.632 22.54 14.24 0.00 3.01
405 406 2.237534 AAATTTGGGGCGCCGGATTG 62.238 55.000 22.54 0.00 0.00 2.67
406 407 3.955543 ATTTGGGGCGCCGGATTGT 62.956 57.895 22.54 1.14 0.00 2.71
418 419 4.596180 GATTGTGCGCGCGGGATG 62.596 66.667 33.06 2.79 0.00 3.51
429 430 4.415150 CGGGATGCTGCAGGTGGT 62.415 66.667 17.12 0.00 0.00 4.16
430 431 2.753043 GGGATGCTGCAGGTGGTG 60.753 66.667 17.12 0.00 0.00 4.17
442 443 3.894947 GTGGTGCCGCCGTGTTTT 61.895 61.111 0.00 0.00 41.21 2.43
443 444 3.141488 TGGTGCCGCCGTGTTTTT 61.141 55.556 0.00 0.00 41.21 1.94
462 463 5.612725 TTTTTGCATCTGGAAAACCTCTT 57.387 34.783 8.82 0.00 43.32 2.85
463 464 4.853924 TTTGCATCTGGAAAACCTCTTC 57.146 40.909 0.00 0.00 32.42 2.87
464 465 2.426522 TGCATCTGGAAAACCTCTTCG 58.573 47.619 0.00 0.00 0.00 3.79
465 466 1.131315 GCATCTGGAAAACCTCTTCGC 59.869 52.381 0.00 0.00 0.00 4.70
466 467 1.740025 CATCTGGAAAACCTCTTCGCC 59.260 52.381 0.00 0.00 0.00 5.54
467 468 0.320421 TCTGGAAAACCTCTTCGCCG 60.320 55.000 0.00 0.00 0.00 6.46
468 469 1.912371 CTGGAAAACCTCTTCGCCGC 61.912 60.000 0.00 0.00 0.00 6.53
469 470 1.671379 GGAAAACCTCTTCGCCGCT 60.671 57.895 0.00 0.00 0.00 5.52
470 471 1.636570 GGAAAACCTCTTCGCCGCTC 61.637 60.000 0.00 0.00 0.00 5.03
471 472 1.636570 GAAAACCTCTTCGCCGCTCC 61.637 60.000 0.00 0.00 0.00 4.70
472 473 3.607370 AAACCTCTTCGCCGCTCCC 62.607 63.158 0.00 0.00 0.00 4.30
484 485 2.126850 GCTCCCGCGCAAAAAGAC 60.127 61.111 8.75 0.00 0.00 3.01
485 486 2.617274 GCTCCCGCGCAAAAAGACT 61.617 57.895 8.75 0.00 0.00 3.24
486 487 1.207593 CTCCCGCGCAAAAAGACTG 59.792 57.895 8.75 0.00 0.00 3.51
487 488 1.507141 CTCCCGCGCAAAAAGACTGT 61.507 55.000 8.75 0.00 0.00 3.55
488 489 1.098712 TCCCGCGCAAAAAGACTGTT 61.099 50.000 8.75 0.00 0.00 3.16
489 490 0.248866 CCCGCGCAAAAAGACTGTTT 60.249 50.000 8.75 0.00 0.00 2.83
490 491 1.555477 CCGCGCAAAAAGACTGTTTT 58.445 45.000 8.75 0.00 0.00 2.43
491 492 2.541999 CCCGCGCAAAAAGACTGTTTTA 60.542 45.455 8.75 0.00 0.00 1.52
492 493 2.719046 CCGCGCAAAAAGACTGTTTTAG 59.281 45.455 8.75 0.00 0.00 1.85
493 494 3.359654 CGCGCAAAAAGACTGTTTTAGT 58.640 40.909 8.75 0.00 44.02 2.24
494 495 3.177643 CGCGCAAAAAGACTGTTTTAGTG 59.822 43.478 8.75 0.00 40.53 2.74
495 496 3.061205 GCGCAAAAAGACTGTTTTAGTGC 60.061 43.478 0.30 8.13 40.53 4.40
496 497 4.351192 CGCAAAAAGACTGTTTTAGTGCT 58.649 39.130 13.40 0.00 40.53 4.40
497 498 4.204978 CGCAAAAAGACTGTTTTAGTGCTG 59.795 41.667 13.40 6.75 40.53 4.41
498 499 5.102313 GCAAAAAGACTGTTTTAGTGCTGT 58.898 37.500 10.01 0.00 40.53 4.40
499 500 6.262601 GCAAAAAGACTGTTTTAGTGCTGTA 58.737 36.000 10.01 0.00 40.53 2.74
500 501 6.750039 GCAAAAAGACTGTTTTAGTGCTGTAA 59.250 34.615 10.01 0.00 40.53 2.41
501 502 7.274686 GCAAAAAGACTGTTTTAGTGCTGTAAA 59.725 33.333 10.01 0.00 40.53 2.01
502 503 9.134734 CAAAAAGACTGTTTTAGTGCTGTAAAA 57.865 29.630 0.00 1.12 40.53 1.52
503 504 8.911247 AAAAGACTGTTTTAGTGCTGTAAAAG 57.089 30.769 4.61 0.00 40.53 2.27
504 505 7.859325 AAGACTGTTTTAGTGCTGTAAAAGA 57.141 32.000 4.61 3.50 40.53 2.52
505 506 7.859325 AGACTGTTTTAGTGCTGTAAAAGAA 57.141 32.000 4.61 0.00 40.53 2.52
506 507 8.451908 AGACTGTTTTAGTGCTGTAAAAGAAT 57.548 30.769 4.61 0.00 40.53 2.40
507 508 8.903820 AGACTGTTTTAGTGCTGTAAAAGAATT 58.096 29.630 4.61 0.00 40.53 2.17
514 515 6.359480 AGTGCTGTAAAAGAATTATACCGC 57.641 37.500 0.00 0.00 32.51 5.68
515 516 5.006358 AGTGCTGTAAAAGAATTATACCGCG 59.994 40.000 0.00 0.00 33.96 6.46
516 517 4.209112 GCTGTAAAAGAATTATACCGCGC 58.791 43.478 0.00 0.00 0.00 6.86
517 518 4.769215 CTGTAAAAGAATTATACCGCGCC 58.231 43.478 0.00 0.00 0.00 6.53
518 519 3.245754 TGTAAAAGAATTATACCGCGCCG 59.754 43.478 0.00 0.00 0.00 6.46
519 520 2.228138 AAAGAATTATACCGCGCCGA 57.772 45.000 0.00 0.00 0.00 5.54
520 521 1.779569 AAGAATTATACCGCGCCGAG 58.220 50.000 0.00 0.00 0.00 4.63
521 522 0.038526 AGAATTATACCGCGCCGAGG 60.039 55.000 4.98 4.98 0.00 4.63
522 523 1.623973 GAATTATACCGCGCCGAGGC 61.624 60.000 6.84 3.59 37.85 4.70
539 540 3.725819 CGAAGCACCCGTGTTGAA 58.274 55.556 0.00 0.00 0.00 2.69
540 541 1.569493 CGAAGCACCCGTGTTGAAG 59.431 57.895 0.00 0.00 0.00 3.02
541 542 0.878523 CGAAGCACCCGTGTTGAAGA 60.879 55.000 0.00 0.00 0.00 2.87
542 543 1.523758 GAAGCACCCGTGTTGAAGAT 58.476 50.000 0.00 0.00 0.00 2.40
543 544 1.197721 GAAGCACCCGTGTTGAAGATG 59.802 52.381 0.00 0.00 0.00 2.90
544 545 1.210155 GCACCCGTGTTGAAGATGC 59.790 57.895 0.00 0.00 0.00 3.91
545 546 1.237285 GCACCCGTGTTGAAGATGCT 61.237 55.000 0.00 0.00 0.00 3.79
546 547 1.943968 GCACCCGTGTTGAAGATGCTA 60.944 52.381 0.00 0.00 0.00 3.49
547 548 2.422597 CACCCGTGTTGAAGATGCTAA 58.577 47.619 0.00 0.00 0.00 3.09
548 549 2.416547 CACCCGTGTTGAAGATGCTAAG 59.583 50.000 0.00 0.00 0.00 2.18
549 550 2.038557 ACCCGTGTTGAAGATGCTAAGT 59.961 45.455 0.00 0.00 0.00 2.24
550 551 3.074412 CCCGTGTTGAAGATGCTAAGTT 58.926 45.455 0.00 0.00 0.00 2.66
551 552 4.250464 CCCGTGTTGAAGATGCTAAGTTA 58.750 43.478 0.00 0.00 0.00 2.24
552 553 4.876107 CCCGTGTTGAAGATGCTAAGTTAT 59.124 41.667 0.00 0.00 0.00 1.89
553 554 5.354234 CCCGTGTTGAAGATGCTAAGTTATT 59.646 40.000 0.00 0.00 0.00 1.40
554 555 6.128007 CCCGTGTTGAAGATGCTAAGTTATTT 60.128 38.462 0.00 0.00 0.00 1.40
555 556 7.305474 CCGTGTTGAAGATGCTAAGTTATTTT 58.695 34.615 0.00 0.00 0.00 1.82
556 557 7.807907 CCGTGTTGAAGATGCTAAGTTATTTTT 59.192 33.333 0.00 0.00 0.00 1.94
580 581 2.593346 AGTCGGCAAGATGAGATGAC 57.407 50.000 0.00 0.00 0.00 3.06
600 601 0.111061 ATGCTGGCTGACTTGTCCAA 59.889 50.000 0.00 0.00 0.00 3.53
601 602 0.106769 TGCTGGCTGACTTGTCCAAA 60.107 50.000 0.00 0.00 0.00 3.28
610 611 5.183904 GGCTGACTTGTCCAAAGTAAATCAT 59.816 40.000 0.00 0.00 0.00 2.45
620 621 8.134895 TGTCCAAAGTAAATCATGAACTGTTTC 58.865 33.333 0.00 0.00 0.00 2.78
633 637 5.719173 TGAACTGTTTCTTTTGGGACTTTG 58.281 37.500 0.00 0.00 32.36 2.77
647 651 5.070001 TGGGACTTTGAAGTTACCTGATTG 58.930 41.667 15.13 0.00 39.88 2.67
652 656 5.765182 ACTTTGAAGTTACCTGATTGGACTG 59.235 40.000 0.00 0.00 35.21 3.51
656 660 2.093973 AGTTACCTGATTGGACTGCTCG 60.094 50.000 0.00 0.00 39.71 5.03
661 665 0.250684 TGATTGGACTGCTCGGCAAA 60.251 50.000 0.35 0.00 38.41 3.68
668 672 2.385315 GACTGCTCGGCAAAGAAAAAC 58.615 47.619 0.35 0.00 38.41 2.43
672 676 4.278419 ACTGCTCGGCAAAGAAAAACTAAT 59.722 37.500 0.35 0.00 38.41 1.73
673 677 4.794169 TGCTCGGCAAAGAAAAACTAATC 58.206 39.130 0.00 0.00 34.76 1.75
753 758 4.083271 GGCAAGTCTGACTAATTCACCAAC 60.083 45.833 11.30 0.00 0.00 3.77
763 768 1.878953 ATTCACCAACGACCACACTC 58.121 50.000 0.00 0.00 0.00 3.51
764 769 0.537653 TTCACCAACGACCACACTCA 59.462 50.000 0.00 0.00 0.00 3.41
769 780 1.611977 CCAACGACCACACTCAGACTA 59.388 52.381 0.00 0.00 0.00 2.59
923 935 4.553323 CCTTATATACCCTGTCCGTTTCG 58.447 47.826 0.00 0.00 0.00 3.46
966 978 4.408821 CACCGCCTGCCTGCCTAA 62.409 66.667 0.00 0.00 0.00 2.69
968 980 4.101448 CCGCCTGCCTGCCTAACT 62.101 66.667 0.00 0.00 0.00 2.24
1328 1343 0.319040 TGCTTCGTGAGTGCTCTGTC 60.319 55.000 0.00 0.00 34.12 3.51
1370 1388 6.524933 CGCTTACGAGATATTCTTCCTATGTG 59.475 42.308 0.00 0.00 43.93 3.21
1447 1465 3.312404 GTGTCCTGCACTGTGTGAT 57.688 52.632 9.86 0.00 44.41 3.06
1598 1639 3.483922 GTCAGTTATGATCGCTCAGTTCG 59.516 47.826 0.00 0.00 37.87 3.95
1647 1688 3.721087 CCCTGTGATCTGGGTAGTTTT 57.279 47.619 9.81 0.00 44.56 2.43
1648 1689 4.034285 CCCTGTGATCTGGGTAGTTTTT 57.966 45.455 9.81 0.00 44.56 1.94
1678 1719 3.270960 AGAGAGGAAGTGATCTGGGTAGT 59.729 47.826 0.00 0.00 0.00 2.73
1688 1729 6.426587 AGTGATCTGGGTAGTTAAATGCAAT 58.573 36.000 0.00 0.00 0.00 3.56
1726 1792 5.767665 ACTGACTGATAGATAGTCGCATCTT 59.232 40.000 0.00 0.00 45.82 2.40
1728 1794 7.043961 TGACTGATAGATAGTCGCATCTTTT 57.956 36.000 0.00 0.00 45.82 2.27
1744 1810 8.175069 TCGCATCTTTTGATCTAACAATGTTAC 58.825 33.333 1.08 0.00 36.97 2.50
1775 1841 9.455847 GTTTTGGATATCAATATGAAGAAGTGC 57.544 33.333 4.83 0.00 34.98 4.40
1776 1842 8.985315 TTTGGATATCAATATGAAGAAGTGCT 57.015 30.769 4.83 0.00 34.98 4.40
1777 1843 8.613060 TTGGATATCAATATGAAGAAGTGCTC 57.387 34.615 4.83 0.00 0.00 4.26
1778 1844 7.164122 TGGATATCAATATGAAGAAGTGCTCC 58.836 38.462 4.83 0.00 0.00 4.70
1779 1845 6.597280 GGATATCAATATGAAGAAGTGCTCCC 59.403 42.308 4.83 0.00 0.00 4.30
1780 1846 5.643421 ATCAATATGAAGAAGTGCTCCCT 57.357 39.130 0.00 0.00 0.00 4.20
1781 1847 5.028549 TCAATATGAAGAAGTGCTCCCTC 57.971 43.478 0.00 0.00 0.00 4.30
1782 1848 4.133078 CAATATGAAGAAGTGCTCCCTCC 58.867 47.826 0.00 0.00 0.00 4.30
1783 1849 0.539051 ATGAAGAAGTGCTCCCTCCG 59.461 55.000 0.00 0.00 0.00 4.63
1784 1850 0.832135 TGAAGAAGTGCTCCCTCCGT 60.832 55.000 0.00 0.00 0.00 4.69
1785 1851 0.108567 GAAGAAGTGCTCCCTCCGTC 60.109 60.000 0.00 0.00 0.00 4.79
1786 1852 1.545706 AAGAAGTGCTCCCTCCGTCC 61.546 60.000 0.00 0.00 0.00 4.79
1787 1853 3.003763 AAGTGCTCCCTCCGTCCC 61.004 66.667 0.00 0.00 0.00 4.46
1788 1854 3.846405 AAGTGCTCCCTCCGTCCCA 62.846 63.158 0.00 0.00 0.00 4.37
1789 1855 3.319198 GTGCTCCCTCCGTCCCAA 61.319 66.667 0.00 0.00 0.00 4.12
1790 1856 2.528127 TGCTCCCTCCGTCCCAAA 60.528 61.111 0.00 0.00 0.00 3.28
1791 1857 2.150719 TGCTCCCTCCGTCCCAAAA 61.151 57.895 0.00 0.00 0.00 2.44
1792 1858 1.303282 GCTCCCTCCGTCCCAAAAT 59.697 57.895 0.00 0.00 0.00 1.82
1793 1859 0.544697 GCTCCCTCCGTCCCAAAATA 59.455 55.000 0.00 0.00 0.00 1.40
1794 1860 1.475213 GCTCCCTCCGTCCCAAAATAG 60.475 57.143 0.00 0.00 0.00 1.73
1795 1861 1.141053 CTCCCTCCGTCCCAAAATAGG 59.859 57.143 0.00 0.00 0.00 2.57
1796 1862 0.465642 CCCTCCGTCCCAAAATAGGC 60.466 60.000 0.00 0.00 0.00 3.93
1797 1863 0.814010 CCTCCGTCCCAAAATAGGCG 60.814 60.000 0.00 0.00 0.00 5.52
1798 1864 0.177141 CTCCGTCCCAAAATAGGCGA 59.823 55.000 0.00 0.00 0.00 5.54
1799 1865 0.108041 TCCGTCCCAAAATAGGCGAC 60.108 55.000 0.00 0.00 0.00 5.19
1801 1867 1.287425 CGTCCCAAAATAGGCGACTC 58.713 55.000 0.00 0.00 43.67 3.36
1802 1868 1.404986 CGTCCCAAAATAGGCGACTCA 60.405 52.381 0.00 0.00 43.67 3.41
1803 1869 2.706890 GTCCCAAAATAGGCGACTCAA 58.293 47.619 0.00 0.00 43.67 3.02
1804 1870 2.418976 GTCCCAAAATAGGCGACTCAAC 59.581 50.000 0.00 0.00 43.67 3.18
1805 1871 2.304761 TCCCAAAATAGGCGACTCAACT 59.695 45.455 0.00 0.00 43.67 3.16
1806 1872 3.081804 CCCAAAATAGGCGACTCAACTT 58.918 45.455 0.00 0.00 43.67 2.66
1807 1873 3.506067 CCCAAAATAGGCGACTCAACTTT 59.494 43.478 0.00 0.00 43.67 2.66
1808 1874 4.475944 CCAAAATAGGCGACTCAACTTTG 58.524 43.478 0.00 0.16 43.67 2.77
1809 1875 4.023193 CCAAAATAGGCGACTCAACTTTGT 60.023 41.667 0.00 0.00 43.67 2.83
1810 1876 5.180492 CCAAAATAGGCGACTCAACTTTGTA 59.820 40.000 0.00 0.00 43.67 2.41
1819 1885 6.238293 GGCGACTCAACTTTGTACTAACTTTT 60.238 38.462 0.00 0.00 0.00 2.27
1827 1893 8.336080 CAACTTTGTACTAACTTTTCCTCTGTC 58.664 37.037 0.00 0.00 0.00 3.51
1829 1895 5.479124 TGTACTAACTTTTCCTCTGTCCC 57.521 43.478 0.00 0.00 0.00 4.46
1830 1896 4.903049 TGTACTAACTTTTCCTCTGTCCCA 59.097 41.667 0.00 0.00 0.00 4.37
1835 1901 7.523415 ACTAACTTTTCCTCTGTCCCAAAATA 58.477 34.615 0.00 0.00 0.00 1.40
1836 1902 8.002459 ACTAACTTTTCCTCTGTCCCAAAATAA 58.998 33.333 0.00 0.00 0.00 1.40
1837 1903 6.901081 ACTTTTCCTCTGTCCCAAAATAAG 57.099 37.500 0.00 0.00 0.00 1.73
1838 1904 6.373759 ACTTTTCCTCTGTCCCAAAATAAGT 58.626 36.000 0.00 0.00 0.00 2.24
1839 1905 6.265422 ACTTTTCCTCTGTCCCAAAATAAGTG 59.735 38.462 0.00 0.00 0.00 3.16
1840 1906 5.576563 TTCCTCTGTCCCAAAATAAGTGA 57.423 39.130 0.00 0.00 0.00 3.41
1841 1907 4.906618 TCCTCTGTCCCAAAATAAGTGAC 58.093 43.478 0.00 0.00 0.00 3.67
1842 1908 4.597507 TCCTCTGTCCCAAAATAAGTGACT 59.402 41.667 0.00 0.00 0.00 3.41
1844 1910 5.513094 CCTCTGTCCCAAAATAAGTGACTCA 60.513 44.000 0.00 0.00 0.00 3.41
1845 1911 5.935945 TCTGTCCCAAAATAAGTGACTCAA 58.064 37.500 0.00 0.00 0.00 3.02
1846 1912 5.763204 TCTGTCCCAAAATAAGTGACTCAAC 59.237 40.000 0.00 0.00 0.00 3.18
1847 1913 5.690865 TGTCCCAAAATAAGTGACTCAACT 58.309 37.500 0.00 0.00 0.00 3.16
1848 1914 6.126409 TGTCCCAAAATAAGTGACTCAACTT 58.874 36.000 0.00 0.00 42.89 2.66
1850 1916 6.918022 GTCCCAAAATAAGTGACTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
1852 1918 7.776030 TCCCAAAATAAGTGACTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
1861 1927 9.530633 AAGTGACTCAACTTTGTACTAACTTAG 57.469 33.333 0.00 0.00 37.05 2.18
1862 1928 8.142551 AGTGACTCAACTTTGTACTAACTTAGG 58.857 37.037 0.88 0.00 0.00 2.69
1863 1929 7.384387 GTGACTCAACTTTGTACTAACTTAGGG 59.616 40.741 0.88 0.00 0.00 3.53
1904 1970 4.654015 TGAGCGAACAAACACACTAAAAC 58.346 39.130 0.00 0.00 0.00 2.43
1992 2061 1.756561 GTGGCCACACTGGTTTGGT 60.757 57.895 31.23 0.00 44.29 3.67
1993 2062 1.454847 TGGCCACACTGGTTTGGTC 60.455 57.895 0.00 3.83 40.46 4.02
1994 2063 2.200337 GGCCACACTGGTTTGGTCC 61.200 63.158 0.00 5.92 40.46 4.46
1995 2064 1.152756 GCCACACTGGTTTGGTCCT 60.153 57.895 7.60 0.00 40.46 3.85
1996 2065 1.455383 GCCACACTGGTTTGGTCCTG 61.455 60.000 7.60 0.00 40.46 3.86
1997 2066 0.106719 CCACACTGGTTTGGTCCTGT 60.107 55.000 0.00 0.00 39.60 4.00
1998 2067 1.142060 CCACACTGGTTTGGTCCTGTA 59.858 52.381 0.00 0.00 37.76 2.74
1999 2068 2.218603 CACACTGGTTTGGTCCTGTAC 58.781 52.381 0.00 0.00 37.76 2.90
2295 2498 4.470602 TCGATCCAGAGCCTAAAGTGATA 58.529 43.478 0.00 0.00 0.00 2.15
2296 2499 4.520874 TCGATCCAGAGCCTAAAGTGATAG 59.479 45.833 0.00 0.00 0.00 2.08
2297 2500 4.520874 CGATCCAGAGCCTAAAGTGATAGA 59.479 45.833 0.00 0.00 0.00 1.98
2298 2501 5.335583 CGATCCAGAGCCTAAAGTGATAGAG 60.336 48.000 0.00 0.00 0.00 2.43
2299 2502 4.873010 TCCAGAGCCTAAAGTGATAGAGT 58.127 43.478 0.00 0.00 0.00 3.24
2300 2503 6.014771 TCCAGAGCCTAAAGTGATAGAGTA 57.985 41.667 0.00 0.00 0.00 2.59
2483 2779 0.976073 CACGTGAGGGTCCCACCTAT 60.976 60.000 10.90 0.00 42.10 2.57
2544 2840 4.321899 GGCCTATGAAGCAGAGATCTAGTG 60.322 50.000 0.00 0.00 0.00 2.74
2560 2856 5.835113 TCTAGTGCAAAAGCAAAGTTCTT 57.165 34.783 0.00 0.00 0.00 2.52
2621 2917 9.895138 TTCATTTACCTAGAAAATAGTACACCC 57.105 33.333 0.00 0.00 0.00 4.61
2622 2918 9.049050 TCATTTACCTAGAAAATAGTACACCCA 57.951 33.333 0.00 0.00 0.00 4.51
2623 2919 9.675464 CATTTACCTAGAAAATAGTACACCCAA 57.325 33.333 0.00 0.00 0.00 4.12
2624 2920 9.901172 ATTTACCTAGAAAATAGTACACCCAAG 57.099 33.333 0.00 0.00 0.00 3.61
2625 2921 6.309389 ACCTAGAAAATAGTACACCCAAGG 57.691 41.667 0.00 0.00 0.00 3.61
2626 2922 5.789054 ACCTAGAAAATAGTACACCCAAGGT 59.211 40.000 0.00 0.00 35.62 3.50
2627 2923 6.070366 ACCTAGAAAATAGTACACCCAAGGTC 60.070 42.308 0.00 0.00 31.02 3.85
2628 2924 5.836024 AGAAAATAGTACACCCAAGGTCA 57.164 39.130 0.00 0.00 31.02 4.02
2629 2925 6.195600 AGAAAATAGTACACCCAAGGTCAA 57.804 37.500 0.00 0.00 31.02 3.18
2630 2926 6.607019 AGAAAATAGTACACCCAAGGTCAAA 58.393 36.000 0.00 0.00 31.02 2.69
2631 2927 7.064229 AGAAAATAGTACACCCAAGGTCAAAA 58.936 34.615 0.00 0.00 31.02 2.44
2632 2928 7.562088 AGAAAATAGTACACCCAAGGTCAAAAA 59.438 33.333 0.00 0.00 31.02 1.94
2709 3005 7.766736 AGGGGGTTCTGTAATAGTTTTCTAT 57.233 36.000 0.00 0.00 44.11 1.98
2733 3029 7.884816 TTGTAGTTTAGTTGACAGACATAGC 57.115 36.000 0.00 0.00 0.00 2.97
2735 3031 6.866770 TGTAGTTTAGTTGACAGACATAGCAC 59.133 38.462 0.00 0.00 0.00 4.40
2736 3032 5.853936 AGTTTAGTTGACAGACATAGCACA 58.146 37.500 0.00 0.00 0.00 4.57
2758 3057 1.001048 GCACATGCTTGCACTCTCAAA 60.001 47.619 3.55 0.00 42.49 2.69
2826 3125 2.096268 CGGTATATTTGGTGATGCAGCG 60.096 50.000 0.00 0.00 34.27 5.18
2827 3126 2.350772 GGTATATTTGGTGATGCAGCGC 60.351 50.000 7.05 7.05 34.27 5.92
2829 3128 0.734309 TATTTGGTGATGCAGCGCAG 59.266 50.000 18.36 1.31 43.65 5.18
2910 3212 2.358957 TCAGGAAAGGACATCAATGCG 58.641 47.619 0.00 0.00 0.00 4.73
3394 3738 8.792633 CCAAGGTACATTCTGTCATTTTCTTTA 58.207 33.333 0.00 0.00 0.00 1.85
3928 4276 7.015682 AGAGGCAGTAGCATACATATACAGTTT 59.984 37.037 0.00 0.00 46.26 2.66
3931 4279 6.202762 GCAGTAGCATACATATACAGTTTGCA 59.797 38.462 18.20 0.00 46.26 4.08
4225 4651 4.091365 TGTGCAATTCTGAATTCGTACTCG 59.909 41.667 21.39 10.42 38.55 4.18
4228 4654 5.178623 TGCAATTCTGAATTCGTACTCGTTT 59.821 36.000 12.50 0.00 38.33 3.60
4268 4721 3.328931 TCATTCAGAGAAAAGGGAGCACT 59.671 43.478 0.00 0.00 0.00 4.40
4282 4735 2.420687 GGAGCACTCCCTGGTTTCATAG 60.421 54.545 5.30 0.00 43.94 2.23
4283 4736 2.237392 GAGCACTCCCTGGTTTCATAGT 59.763 50.000 0.00 0.00 0.00 2.12
4284 4737 3.450904 AGCACTCCCTGGTTTCATAGTA 58.549 45.455 0.00 0.00 0.00 1.82
4285 4738 4.040755 AGCACTCCCTGGTTTCATAGTAT 58.959 43.478 0.00 0.00 0.00 2.12
4286 4739 5.216622 AGCACTCCCTGGTTTCATAGTATA 58.783 41.667 0.00 0.00 0.00 1.47
4320 4773 3.521605 CGGACCGGATGCAGACTA 58.478 61.111 9.46 0.00 0.00 2.59
4321 4774 1.065928 CGGACCGGATGCAGACTAC 59.934 63.158 9.46 0.00 0.00 2.73
4344 4928 7.452880 ACATACATACAGCACAAGAAAACAT 57.547 32.000 0.00 0.00 0.00 2.71
4354 4938 4.640201 GCACAAGAAAACATAGAGGCCATA 59.360 41.667 5.01 0.00 0.00 2.74
4356 4940 6.486657 GCACAAGAAAACATAGAGGCCATATA 59.513 38.462 5.01 0.00 0.00 0.86
4493 5077 2.192608 CTCGCTTGTGCTTTCCAGGC 62.193 60.000 0.00 0.00 36.97 4.85
4501 5085 2.887360 CTTTCCAGGCAATGCGGG 59.113 61.111 8.07 8.07 0.00 6.13
4507 5091 4.684134 AGGCAATGCGGGGCAGTT 62.684 61.111 0.00 0.00 43.65 3.16
4508 5092 4.133796 GGCAATGCGGGGCAGTTC 62.134 66.667 0.00 0.00 43.65 3.01
4557 5186 2.045536 GCCCCTGGAAGCACAGAG 60.046 66.667 0.00 0.00 40.97 3.35
4605 5234 2.100749 CCGGCAAATAAGGTGGAAATCC 59.899 50.000 0.00 0.00 0.00 3.01
4724 5354 3.010420 GGTGGAAATCTTGTCCAGTAGC 58.990 50.000 0.00 0.00 45.85 3.58
4725 5355 3.559171 GGTGGAAATCTTGTCCAGTAGCA 60.559 47.826 0.00 0.00 45.85 3.49
4751 5383 1.968017 AACAGCCCATGTGAGCACG 60.968 57.895 2.90 0.00 43.00 5.34
4755 5387 1.672356 GCCCATGTGAGCACGAACT 60.672 57.895 0.00 0.00 0.00 3.01
4852 5484 5.316167 TGTTTCTGAACCTTCACATGCTAT 58.684 37.500 0.00 0.00 34.80 2.97
4860 5492 6.149973 TGAACCTTCACATGCTATTTCTGAAG 59.850 38.462 11.21 11.21 38.28 3.02
4862 5494 6.711277 ACCTTCACATGCTATTTCTGAAGTA 58.289 36.000 15.02 0.00 37.29 2.24
4864 5496 7.497249 ACCTTCACATGCTATTTCTGAAGTATC 59.503 37.037 15.02 0.00 37.29 2.24
4867 5499 7.041721 TCACATGCTATTTCTGAAGTATCGTT 58.958 34.615 0.00 0.00 0.00 3.85
4870 5502 4.267690 TGCTATTTCTGAAGTATCGTTGCG 59.732 41.667 0.00 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.155827 CGGCCTGAAATTTTACATCTTTCAA 58.844 36.000 0.00 0.00 38.15 2.69
1 2 5.708948 CGGCCTGAAATTTTACATCTTTCA 58.291 37.500 0.00 0.00 36.74 2.69
2 3 4.562789 GCGGCCTGAAATTTTACATCTTTC 59.437 41.667 0.00 0.00 0.00 2.62
3 4 4.220602 AGCGGCCTGAAATTTTACATCTTT 59.779 37.500 0.00 0.00 0.00 2.52
4 5 3.763897 AGCGGCCTGAAATTTTACATCTT 59.236 39.130 0.00 0.00 0.00 2.40
5 6 3.129287 CAGCGGCCTGAAATTTTACATCT 59.871 43.478 0.00 0.00 41.77 2.90
6 7 3.119495 ACAGCGGCCTGAAATTTTACATC 60.119 43.478 0.00 0.00 41.77 3.06
7 8 2.825532 ACAGCGGCCTGAAATTTTACAT 59.174 40.909 0.00 0.00 41.77 2.29
8 9 2.235016 ACAGCGGCCTGAAATTTTACA 58.765 42.857 0.00 0.00 41.77 2.41
9 10 4.428615 TTACAGCGGCCTGAAATTTTAC 57.571 40.909 0.00 0.00 41.77 2.01
10 11 5.652994 ATTTACAGCGGCCTGAAATTTTA 57.347 34.783 0.00 0.00 41.77 1.52
11 12 4.535526 ATTTACAGCGGCCTGAAATTTT 57.464 36.364 0.00 0.00 41.77 1.82
12 13 5.652994 TTATTTACAGCGGCCTGAAATTT 57.347 34.783 0.00 0.00 41.77 1.82
13 14 5.652994 TTTATTTACAGCGGCCTGAAATT 57.347 34.783 0.00 0.00 41.77 1.82
14 15 5.852282 ATTTATTTACAGCGGCCTGAAAT 57.148 34.783 0.00 2.75 41.77 2.17
15 16 5.406649 CAATTTATTTACAGCGGCCTGAAA 58.593 37.500 0.00 0.00 41.77 2.69
16 17 4.676723 GCAATTTATTTACAGCGGCCTGAA 60.677 41.667 0.00 0.00 41.77 3.02
17 18 3.181491 GCAATTTATTTACAGCGGCCTGA 60.181 43.478 0.00 0.00 41.77 3.86
18 19 3.115554 GCAATTTATTTACAGCGGCCTG 58.884 45.455 0.00 0.00 44.80 4.85
19 20 2.100749 GGCAATTTATTTACAGCGGCCT 59.899 45.455 0.00 0.00 36.04 5.19
20 21 2.159170 TGGCAATTTATTTACAGCGGCC 60.159 45.455 0.00 0.00 39.29 6.13
21 22 3.157932 TGGCAATTTATTTACAGCGGC 57.842 42.857 0.00 0.00 0.00 6.53
22 23 4.930963 TCATGGCAATTTATTTACAGCGG 58.069 39.130 0.00 0.00 0.00 5.52
23 24 7.467557 AAATCATGGCAATTTATTTACAGCG 57.532 32.000 0.00 0.00 0.00 5.18
35 36 9.816354 GTTTGGTAACTAATAAATCATGGCAAT 57.184 29.630 0.00 0.00 32.86 3.56
36 37 8.807118 TGTTTGGTAACTAATAAATCATGGCAA 58.193 29.630 0.00 0.00 35.24 4.52
37 38 8.354711 TGTTTGGTAACTAATAAATCATGGCA 57.645 30.769 0.00 0.00 35.24 4.92
38 39 8.682710 TCTGTTTGGTAACTAATAAATCATGGC 58.317 33.333 0.00 0.00 35.24 4.40
71 72 3.181448 ACATATCAATCGGGTGGGGTAAC 60.181 47.826 0.00 0.00 0.00 2.50
72 73 3.050089 ACATATCAATCGGGTGGGGTAA 58.950 45.455 0.00 0.00 0.00 2.85
73 74 2.696775 ACATATCAATCGGGTGGGGTA 58.303 47.619 0.00 0.00 0.00 3.69
74 75 1.518367 ACATATCAATCGGGTGGGGT 58.482 50.000 0.00 0.00 0.00 4.95
75 76 2.370519 TGTACATATCAATCGGGTGGGG 59.629 50.000 0.00 0.00 0.00 4.96
76 77 3.762407 TGTACATATCAATCGGGTGGG 57.238 47.619 0.00 0.00 0.00 4.61
77 78 5.562696 GCAATTGTACATATCAATCGGGTGG 60.563 44.000 7.40 0.00 34.92 4.61
78 79 5.451908 GCAATTGTACATATCAATCGGGTG 58.548 41.667 7.40 0.00 34.92 4.61
79 80 4.518970 GGCAATTGTACATATCAATCGGGT 59.481 41.667 7.40 0.00 34.92 5.28
80 81 4.082787 GGGCAATTGTACATATCAATCGGG 60.083 45.833 7.40 0.00 34.92 5.14
81 82 4.761739 AGGGCAATTGTACATATCAATCGG 59.238 41.667 7.40 0.00 34.92 4.18
82 83 5.947228 AGGGCAATTGTACATATCAATCG 57.053 39.130 7.40 0.00 34.92 3.34
83 84 6.128282 CGGTAGGGCAATTGTACATATCAATC 60.128 42.308 7.40 0.00 34.92 2.67
84 85 5.705441 CGGTAGGGCAATTGTACATATCAAT 59.295 40.000 7.40 0.00 37.14 2.57
85 86 5.060506 CGGTAGGGCAATTGTACATATCAA 58.939 41.667 7.40 0.00 0.00 2.57
86 87 4.345547 TCGGTAGGGCAATTGTACATATCA 59.654 41.667 7.40 0.00 0.00 2.15
87 88 4.890088 TCGGTAGGGCAATTGTACATATC 58.110 43.478 7.40 2.63 0.00 1.63
88 89 4.967084 TCGGTAGGGCAATTGTACATAT 57.033 40.909 7.40 0.00 0.00 1.78
89 90 4.967084 ATCGGTAGGGCAATTGTACATA 57.033 40.909 7.40 0.10 0.00 2.29
90 91 3.857157 ATCGGTAGGGCAATTGTACAT 57.143 42.857 7.40 1.09 0.00 2.29
91 92 3.637911 AATCGGTAGGGCAATTGTACA 57.362 42.857 7.40 0.00 0.00 2.90
92 93 3.942748 TCAAATCGGTAGGGCAATTGTAC 59.057 43.478 7.40 1.86 0.00 2.90
93 94 4.223556 TCAAATCGGTAGGGCAATTGTA 57.776 40.909 7.40 0.00 0.00 2.41
94 95 3.080300 TCAAATCGGTAGGGCAATTGT 57.920 42.857 7.40 0.00 0.00 2.71
95 96 4.654091 AATCAAATCGGTAGGGCAATTG 57.346 40.909 0.00 0.00 0.00 2.32
96 97 4.709397 TCAAATCAAATCGGTAGGGCAATT 59.291 37.500 0.00 0.00 0.00 2.32
97 98 4.277476 TCAAATCAAATCGGTAGGGCAAT 58.723 39.130 0.00 0.00 0.00 3.56
98 99 3.691575 TCAAATCAAATCGGTAGGGCAA 58.308 40.909 0.00 0.00 0.00 4.52
99 100 3.278574 CTCAAATCAAATCGGTAGGGCA 58.721 45.455 0.00 0.00 0.00 5.36
100 101 2.618709 CCTCAAATCAAATCGGTAGGGC 59.381 50.000 0.00 0.00 0.00 5.19
101 102 4.150897 TCCTCAAATCAAATCGGTAGGG 57.849 45.455 0.00 0.00 0.00 3.53
102 103 7.148573 CGATTATCCTCAAATCAAATCGGTAGG 60.149 40.741 7.23 0.00 41.00 3.18
103 104 7.733608 CGATTATCCTCAAATCAAATCGGTAG 58.266 38.462 7.23 0.00 41.00 3.18
104 105 7.652300 CGATTATCCTCAAATCAAATCGGTA 57.348 36.000 7.23 0.00 41.00 4.02
105 106 6.545504 CGATTATCCTCAAATCAAATCGGT 57.454 37.500 7.23 0.00 41.00 4.69
107 108 5.617751 GCCCGATTATCCTCAAATCAAATCG 60.618 44.000 7.97 7.97 43.09 3.34
108 109 5.617751 CGCCCGATTATCCTCAAATCAAATC 60.618 44.000 0.00 0.00 33.75 2.17
109 110 4.216257 CGCCCGATTATCCTCAAATCAAAT 59.784 41.667 0.00 0.00 33.75 2.32
110 111 3.563808 CGCCCGATTATCCTCAAATCAAA 59.436 43.478 0.00 0.00 33.75 2.69
111 112 3.138304 CGCCCGATTATCCTCAAATCAA 58.862 45.455 0.00 0.00 33.75 2.57
112 113 2.367241 TCGCCCGATTATCCTCAAATCA 59.633 45.455 0.00 0.00 33.75 2.57
113 114 2.996621 CTCGCCCGATTATCCTCAAATC 59.003 50.000 0.00 0.00 0.00 2.17
114 115 2.289694 CCTCGCCCGATTATCCTCAAAT 60.290 50.000 0.00 0.00 0.00 2.32
115 116 1.070134 CCTCGCCCGATTATCCTCAAA 59.930 52.381 0.00 0.00 0.00 2.69
116 117 0.679505 CCTCGCCCGATTATCCTCAA 59.320 55.000 0.00 0.00 0.00 3.02
117 118 0.469331 ACCTCGCCCGATTATCCTCA 60.469 55.000 0.00 0.00 0.00 3.86
118 119 1.542492 TACCTCGCCCGATTATCCTC 58.458 55.000 0.00 0.00 0.00 3.71
119 120 2.005370 TTACCTCGCCCGATTATCCT 57.995 50.000 0.00 0.00 0.00 3.24
120 121 2.825861 TTTACCTCGCCCGATTATCC 57.174 50.000 0.00 0.00 0.00 2.59
140 141 1.616159 CACCCCACATCCGAGTTTTT 58.384 50.000 0.00 0.00 0.00 1.94
141 142 0.251165 CCACCCCACATCCGAGTTTT 60.251 55.000 0.00 0.00 0.00 2.43
142 143 1.378762 CCACCCCACATCCGAGTTT 59.621 57.895 0.00 0.00 0.00 2.66
143 144 2.602676 CCCACCCCACATCCGAGTT 61.603 63.158 0.00 0.00 0.00 3.01
144 145 3.009115 CCCACCCCACATCCGAGT 61.009 66.667 0.00 0.00 0.00 4.18
145 146 3.797353 CCCCACCCCACATCCGAG 61.797 72.222 0.00 0.00 0.00 4.63
146 147 4.667935 ACCCCACCCCACATCCGA 62.668 66.667 0.00 0.00 0.00 4.55
147 148 4.424711 CACCCCACCCCACATCCG 62.425 72.222 0.00 0.00 0.00 4.18
148 149 2.938798 TCACCCCACCCCACATCC 60.939 66.667 0.00 0.00 0.00 3.51
149 150 2.231380 ACTCACCCCACCCCACATC 61.231 63.158 0.00 0.00 0.00 3.06
150 151 2.121506 ACTCACCCCACCCCACAT 60.122 61.111 0.00 0.00 0.00 3.21
151 152 3.174987 CACTCACCCCACCCCACA 61.175 66.667 0.00 0.00 0.00 4.17
152 153 2.292785 AAACACTCACCCCACCCCAC 62.293 60.000 0.00 0.00 0.00 4.61
153 154 2.002018 GAAACACTCACCCCACCCCA 62.002 60.000 0.00 0.00 0.00 4.96
154 155 1.228459 GAAACACTCACCCCACCCC 60.228 63.158 0.00 0.00 0.00 4.95
155 156 0.112412 ATGAAACACTCACCCCACCC 59.888 55.000 0.00 0.00 36.69 4.61
156 157 1.247567 CATGAAACACTCACCCCACC 58.752 55.000 0.00 0.00 36.69 4.61
157 158 1.247567 CCATGAAACACTCACCCCAC 58.752 55.000 0.00 0.00 36.69 4.61
158 159 0.112218 CCCATGAAACACTCACCCCA 59.888 55.000 0.00 0.00 36.69 4.96
159 160 1.250840 GCCCATGAAACACTCACCCC 61.251 60.000 0.00 0.00 36.69 4.95
160 161 1.586154 CGCCCATGAAACACTCACCC 61.586 60.000 0.00 0.00 36.69 4.61
161 162 0.889186 ACGCCCATGAAACACTCACC 60.889 55.000 0.00 0.00 36.69 4.02
162 163 0.238289 CACGCCCATGAAACACTCAC 59.762 55.000 0.00 0.00 36.69 3.51
163 164 0.888736 CCACGCCCATGAAACACTCA 60.889 55.000 0.00 0.00 38.81 3.41
164 165 1.586154 CCCACGCCCATGAAACACTC 61.586 60.000 0.00 0.00 0.00 3.51
165 166 1.603455 CCCACGCCCATGAAACACT 60.603 57.895 0.00 0.00 0.00 3.55
166 167 1.175983 TTCCCACGCCCATGAAACAC 61.176 55.000 0.00 0.00 0.00 3.32
167 168 0.893270 CTTCCCACGCCCATGAAACA 60.893 55.000 0.00 0.00 0.00 2.83
168 169 1.595093 CCTTCCCACGCCCATGAAAC 61.595 60.000 0.00 0.00 0.00 2.78
169 170 1.304052 CCTTCCCACGCCCATGAAA 60.304 57.895 0.00 0.00 0.00 2.69
170 171 2.354729 CCTTCCCACGCCCATGAA 59.645 61.111 0.00 0.00 0.00 2.57
171 172 3.727258 CCCTTCCCACGCCCATGA 61.727 66.667 0.00 0.00 0.00 3.07
172 173 4.820744 CCCCTTCCCACGCCCATG 62.821 72.222 0.00 0.00 0.00 3.66
188 189 0.906282 TCTTCCGTCCAACTACCCCC 60.906 60.000 0.00 0.00 0.00 5.40
189 190 1.134491 CATCTTCCGTCCAACTACCCC 60.134 57.143 0.00 0.00 0.00 4.95
190 191 1.829222 TCATCTTCCGTCCAACTACCC 59.171 52.381 0.00 0.00 0.00 3.69
191 192 2.758979 TCTCATCTTCCGTCCAACTACC 59.241 50.000 0.00 0.00 0.00 3.18
192 193 4.363999 CATCTCATCTTCCGTCCAACTAC 58.636 47.826 0.00 0.00 0.00 2.73
193 194 3.384789 CCATCTCATCTTCCGTCCAACTA 59.615 47.826 0.00 0.00 0.00 2.24
194 195 2.169352 CCATCTCATCTTCCGTCCAACT 59.831 50.000 0.00 0.00 0.00 3.16
195 196 2.168521 TCCATCTCATCTTCCGTCCAAC 59.831 50.000 0.00 0.00 0.00 3.77
196 197 2.168521 GTCCATCTCATCTTCCGTCCAA 59.831 50.000 0.00 0.00 0.00 3.53
197 198 1.757118 GTCCATCTCATCTTCCGTCCA 59.243 52.381 0.00 0.00 0.00 4.02
198 199 1.269309 CGTCCATCTCATCTTCCGTCC 60.269 57.143 0.00 0.00 0.00 4.79
199 200 1.676529 TCGTCCATCTCATCTTCCGTC 59.323 52.381 0.00 0.00 0.00 4.79
200 201 1.405821 GTCGTCCATCTCATCTTCCGT 59.594 52.381 0.00 0.00 0.00 4.69
201 202 1.405463 TGTCGTCCATCTCATCTTCCG 59.595 52.381 0.00 0.00 0.00 4.30
202 203 2.690497 TCTGTCGTCCATCTCATCTTCC 59.310 50.000 0.00 0.00 0.00 3.46
203 204 4.109050 GTTCTGTCGTCCATCTCATCTTC 58.891 47.826 0.00 0.00 0.00 2.87
204 205 3.428180 CGTTCTGTCGTCCATCTCATCTT 60.428 47.826 0.00 0.00 0.00 2.40
205 206 2.098280 CGTTCTGTCGTCCATCTCATCT 59.902 50.000 0.00 0.00 0.00 2.90
206 207 2.159366 ACGTTCTGTCGTCCATCTCATC 60.159 50.000 0.00 0.00 40.04 2.92
207 208 1.819288 ACGTTCTGTCGTCCATCTCAT 59.181 47.619 0.00 0.00 40.04 2.90
208 209 1.244816 ACGTTCTGTCGTCCATCTCA 58.755 50.000 0.00 0.00 40.04 3.27
209 210 2.349297 AACGTTCTGTCGTCCATCTC 57.651 50.000 0.00 0.00 43.38 2.75
210 211 3.928727 TTAACGTTCTGTCGTCCATCT 57.071 42.857 2.82 0.00 43.38 2.90
211 212 4.665897 GCTTTTAACGTTCTGTCGTCCATC 60.666 45.833 2.82 0.00 43.38 3.51
212 213 3.185797 GCTTTTAACGTTCTGTCGTCCAT 59.814 43.478 2.82 0.00 43.38 3.41
213 214 2.540931 GCTTTTAACGTTCTGTCGTCCA 59.459 45.455 2.82 0.00 43.38 4.02
214 215 2.540931 TGCTTTTAACGTTCTGTCGTCC 59.459 45.455 2.82 0.00 43.38 4.79
215 216 3.847037 TGCTTTTAACGTTCTGTCGTC 57.153 42.857 2.82 0.00 43.38 4.20
216 217 4.056050 AGATGCTTTTAACGTTCTGTCGT 58.944 39.130 2.82 0.00 46.19 4.34
217 218 4.434330 GGAGATGCTTTTAACGTTCTGTCG 60.434 45.833 2.82 0.00 0.00 4.35
218 219 4.451096 TGGAGATGCTTTTAACGTTCTGTC 59.549 41.667 2.82 0.00 0.00 3.51
219 220 4.385825 TGGAGATGCTTTTAACGTTCTGT 58.614 39.130 2.82 0.00 0.00 3.41
220 221 5.356882 TTGGAGATGCTTTTAACGTTCTG 57.643 39.130 2.82 0.00 0.00 3.02
221 222 6.316390 CCTATTGGAGATGCTTTTAACGTTCT 59.684 38.462 2.82 0.00 34.57 3.01
222 223 6.487103 CCTATTGGAGATGCTTTTAACGTTC 58.513 40.000 2.82 0.00 34.57 3.95
223 224 5.163652 GCCTATTGGAGATGCTTTTAACGTT 60.164 40.000 5.88 5.88 34.57 3.99
224 225 4.335594 GCCTATTGGAGATGCTTTTAACGT 59.664 41.667 0.00 0.00 34.57 3.99
225 226 4.552767 CGCCTATTGGAGATGCTTTTAACG 60.553 45.833 0.00 0.00 34.95 3.18
226 227 4.789802 GCGCCTATTGGAGATGCTTTTAAC 60.790 45.833 0.00 0.00 34.95 2.01
227 228 3.315191 GCGCCTATTGGAGATGCTTTTAA 59.685 43.478 0.00 0.00 34.95 1.52
228 229 2.878406 GCGCCTATTGGAGATGCTTTTA 59.122 45.455 0.00 0.00 34.95 1.52
229 230 1.678101 GCGCCTATTGGAGATGCTTTT 59.322 47.619 0.00 0.00 34.95 2.27
230 231 1.133976 AGCGCCTATTGGAGATGCTTT 60.134 47.619 2.29 0.00 34.95 3.51
231 232 0.471617 AGCGCCTATTGGAGATGCTT 59.528 50.000 2.29 0.00 34.95 3.91
232 233 0.034616 GAGCGCCTATTGGAGATGCT 59.965 55.000 2.29 2.03 34.95 3.79
233 234 0.250038 TGAGCGCCTATTGGAGATGC 60.250 55.000 2.29 0.00 34.95 3.91
234 235 2.245159 TTGAGCGCCTATTGGAGATG 57.755 50.000 2.29 0.00 34.95 2.90
235 236 3.281727 TTTTGAGCGCCTATTGGAGAT 57.718 42.857 2.29 0.00 34.95 2.75
236 237 2.779755 TTTTGAGCGCCTATTGGAGA 57.220 45.000 2.29 0.00 34.95 3.71
253 254 0.878416 TTAGCGCGTGAGGCATTTTT 59.122 45.000 8.43 0.00 43.84 1.94
254 255 0.878416 TTTAGCGCGTGAGGCATTTT 59.122 45.000 8.43 0.00 43.84 1.82
255 256 0.878416 TTTTAGCGCGTGAGGCATTT 59.122 45.000 8.43 0.00 43.84 2.32
256 257 0.878416 TTTTTAGCGCGTGAGGCATT 59.122 45.000 8.43 0.00 43.84 3.56
257 258 1.094785 ATTTTTAGCGCGTGAGGCAT 58.905 45.000 8.43 0.00 43.84 4.40
258 259 1.728068 TATTTTTAGCGCGTGAGGCA 58.272 45.000 8.43 0.00 43.84 4.75
259 260 2.817538 TTATTTTTAGCGCGTGAGGC 57.182 45.000 8.43 0.00 38.69 4.70
260 261 3.000925 ACGATTATTTTTAGCGCGTGAGG 59.999 43.478 8.43 0.00 0.00 3.86
261 262 4.178156 ACGATTATTTTTAGCGCGTGAG 57.822 40.909 8.43 0.00 0.00 3.51
262 263 4.587211 AACGATTATTTTTAGCGCGTGA 57.413 36.364 8.43 0.00 0.00 4.35
263 264 5.658674 AAAACGATTATTTTTAGCGCGTG 57.341 34.783 8.43 0.00 0.00 5.34
264 265 5.626132 ACAAAAACGATTATTTTTAGCGCGT 59.374 32.000 8.43 0.00 39.25 6.01
265 266 5.937982 CACAAAAACGATTATTTTTAGCGCG 59.062 36.000 0.00 0.00 39.25 6.86
266 267 5.721690 GCACAAAAACGATTATTTTTAGCGC 59.278 36.000 0.00 0.00 39.25 5.92
267 268 5.937982 CGCACAAAAACGATTATTTTTAGCG 59.062 36.000 19.03 19.03 46.49 4.26
268 269 5.721690 GCGCACAAAAACGATTATTTTTAGC 59.278 36.000 0.30 0.00 39.25 3.09
269 270 6.802222 TGCGCACAAAAACGATTATTTTTAG 58.198 32.000 5.66 0.00 39.25 1.85
270 271 6.637254 TCTGCGCACAAAAACGATTATTTTTA 59.363 30.769 5.66 0.00 39.25 1.52
271 272 5.460419 TCTGCGCACAAAAACGATTATTTTT 59.540 32.000 5.66 0.00 41.38 1.94
272 273 4.979197 TCTGCGCACAAAAACGATTATTTT 59.021 33.333 5.66 0.00 33.13 1.82
273 274 4.541779 TCTGCGCACAAAAACGATTATTT 58.458 34.783 5.66 0.00 0.00 1.40
274 275 4.083537 TCTCTGCGCACAAAAACGATTATT 60.084 37.500 5.66 0.00 0.00 1.40
275 276 3.435327 TCTCTGCGCACAAAAACGATTAT 59.565 39.130 5.66 0.00 0.00 1.28
276 277 2.803386 TCTCTGCGCACAAAAACGATTA 59.197 40.909 5.66 0.00 0.00 1.75
277 278 1.601903 TCTCTGCGCACAAAAACGATT 59.398 42.857 5.66 0.00 0.00 3.34
278 279 1.069906 GTCTCTGCGCACAAAAACGAT 60.070 47.619 5.66 0.00 0.00 3.73
279 280 0.303493 GTCTCTGCGCACAAAAACGA 59.697 50.000 5.66 0.00 0.00 3.85
280 281 0.027455 TGTCTCTGCGCACAAAAACG 59.973 50.000 5.66 0.00 0.00 3.60
281 282 1.330521 TCTGTCTCTGCGCACAAAAAC 59.669 47.619 5.66 1.02 0.00 2.43
282 283 1.662517 TCTGTCTCTGCGCACAAAAA 58.337 45.000 5.66 0.00 0.00 1.94
283 284 1.662517 TTCTGTCTCTGCGCACAAAA 58.337 45.000 5.66 0.00 0.00 2.44
284 285 1.662517 TTTCTGTCTCTGCGCACAAA 58.337 45.000 5.66 0.00 0.00 2.83
285 286 1.330521 GTTTTCTGTCTCTGCGCACAA 59.669 47.619 5.66 0.00 0.00 3.33
286 287 0.937304 GTTTTCTGTCTCTGCGCACA 59.063 50.000 5.66 1.13 0.00 4.57
287 288 0.937304 TGTTTTCTGTCTCTGCGCAC 59.063 50.000 5.66 0.00 0.00 5.34
288 289 1.220529 CTGTTTTCTGTCTCTGCGCA 58.779 50.000 10.98 10.98 0.00 6.09
289 290 0.110464 GCTGTTTTCTGTCTCTGCGC 60.110 55.000 0.00 0.00 0.00 6.09
290 291 0.162507 CGCTGTTTTCTGTCTCTGCG 59.837 55.000 0.00 0.00 40.38 5.18
291 292 0.110464 GCGCTGTTTTCTGTCTCTGC 60.110 55.000 0.00 0.00 0.00 4.26
292 293 1.506493 AGCGCTGTTTTCTGTCTCTG 58.494 50.000 10.39 0.00 0.00 3.35
293 294 2.139118 GAAGCGCTGTTTTCTGTCTCT 58.861 47.619 12.58 0.00 0.00 3.10
294 295 1.867233 TGAAGCGCTGTTTTCTGTCTC 59.133 47.619 12.58 0.06 0.00 3.36
295 296 1.869767 CTGAAGCGCTGTTTTCTGTCT 59.130 47.619 12.58 0.00 0.00 3.41
296 297 1.661460 GCTGAAGCGCTGTTTTCTGTC 60.661 52.381 12.58 1.84 0.00 3.51
297 298 0.308993 GCTGAAGCGCTGTTTTCTGT 59.691 50.000 12.58 0.00 0.00 3.41
298 299 3.083213 GCTGAAGCGCTGTTTTCTG 57.917 52.632 12.58 10.13 0.00 3.02
309 310 3.602390 TTTTACAACGTCAGCTGAAGC 57.398 42.857 26.72 11.59 42.49 3.86
310 311 6.670927 GCTCTATTTTACAACGTCAGCTGAAG 60.671 42.308 25.45 25.45 0.00 3.02
311 312 5.120208 GCTCTATTTTACAACGTCAGCTGAA 59.880 40.000 20.19 0.00 0.00 3.02
312 313 4.625742 GCTCTATTTTACAACGTCAGCTGA 59.374 41.667 13.74 13.74 0.00 4.26
313 314 4.490959 CGCTCTATTTTACAACGTCAGCTG 60.491 45.833 7.63 7.63 0.00 4.24
314 315 3.612860 CGCTCTATTTTACAACGTCAGCT 59.387 43.478 0.00 0.00 0.00 4.24
315 316 3.781280 GCGCTCTATTTTACAACGTCAGC 60.781 47.826 0.00 0.00 0.00 4.26
316 317 3.539592 CGCGCTCTATTTTACAACGTCAG 60.540 47.826 5.56 0.00 0.00 3.51
317 318 2.343246 CGCGCTCTATTTTACAACGTCA 59.657 45.455 5.56 0.00 0.00 4.35
318 319 2.840968 GCGCGCTCTATTTTACAACGTC 60.841 50.000 26.67 0.00 0.00 4.34
319 320 1.060122 GCGCGCTCTATTTTACAACGT 59.940 47.619 26.67 0.00 0.00 3.99
320 321 1.059979 TGCGCGCTCTATTTTACAACG 59.940 47.619 33.29 0.00 0.00 4.10
321 322 2.159761 TGTGCGCGCTCTATTTTACAAC 60.160 45.455 33.29 17.27 0.00 3.32
322 323 2.070028 TGTGCGCGCTCTATTTTACAA 58.930 42.857 33.29 6.28 0.00 2.41
323 324 1.715993 TGTGCGCGCTCTATTTTACA 58.284 45.000 33.29 21.85 0.00 2.41
324 325 2.798834 TTGTGCGCGCTCTATTTTAC 57.201 45.000 33.29 19.34 0.00 2.01
325 326 3.815337 TTTTGTGCGCGCTCTATTTTA 57.185 38.095 33.29 8.68 0.00 1.52
326 327 2.697431 TTTTGTGCGCGCTCTATTTT 57.303 40.000 33.29 0.00 0.00 1.82
327 328 2.031157 ACTTTTTGTGCGCGCTCTATTT 60.031 40.909 33.29 9.45 0.00 1.40
328 329 1.535462 ACTTTTTGTGCGCGCTCTATT 59.465 42.857 33.29 8.39 0.00 1.73
329 330 1.156736 ACTTTTTGTGCGCGCTCTAT 58.843 45.000 33.29 7.64 0.00 1.98
330 331 0.941542 AACTTTTTGTGCGCGCTCTA 59.058 45.000 33.29 22.82 0.00 2.43
331 332 0.100503 AAACTTTTTGTGCGCGCTCT 59.899 45.000 33.29 8.68 0.00 4.09
332 333 0.920664 AAAACTTTTTGTGCGCGCTC 59.079 45.000 33.29 29.03 0.00 5.03
333 334 2.116366 CTAAAACTTTTTGTGCGCGCT 58.884 42.857 33.29 9.65 0.00 5.92
334 335 1.395449 GCTAAAACTTTTTGTGCGCGC 60.395 47.619 27.26 27.26 0.00 6.86
335 336 1.137287 CGCTAAAACTTTTTGTGCGCG 60.137 47.619 17.25 0.00 42.41 6.86
336 337 2.536811 CGCTAAAACTTTTTGTGCGC 57.463 45.000 17.25 0.00 42.41 6.09
338 339 3.419596 CCGTACGCTAAAACTTTTTGTGC 59.580 43.478 10.49 5.59 0.00 4.57
339 340 3.969981 CCCGTACGCTAAAACTTTTTGTG 59.030 43.478 10.49 7.45 0.00 3.33
340 341 3.548616 GCCCGTACGCTAAAACTTTTTGT 60.549 43.478 10.49 0.00 0.00 2.83
341 342 2.975193 GCCCGTACGCTAAAACTTTTTG 59.025 45.455 10.49 0.00 0.00 2.44
342 343 2.349722 CGCCCGTACGCTAAAACTTTTT 60.350 45.455 10.49 0.00 0.00 1.94
343 344 1.195222 CGCCCGTACGCTAAAACTTTT 59.805 47.619 10.49 0.00 0.00 2.27
344 345 0.792031 CGCCCGTACGCTAAAACTTT 59.208 50.000 10.49 0.00 0.00 2.66
345 346 0.319813 ACGCCCGTACGCTAAAACTT 60.320 50.000 10.49 0.00 36.19 2.66
346 347 1.010419 CACGCCCGTACGCTAAAACT 61.010 55.000 10.49 0.00 36.19 2.66
347 348 1.417206 CACGCCCGTACGCTAAAAC 59.583 57.895 10.49 0.00 36.19 2.43
348 349 2.381967 GCACGCCCGTACGCTAAAA 61.382 57.895 10.49 0.00 36.19 1.52
349 350 2.810458 GCACGCCCGTACGCTAAA 60.810 61.111 10.49 0.00 36.19 1.85
368 369 4.129737 GCAGCACAGCAGCCCATG 62.130 66.667 0.00 0.00 35.03 3.66
369 370 4.671590 TGCAGCACAGCAGCCCAT 62.672 61.111 3.95 0.00 40.32 4.00
370 371 4.898765 TTGCAGCACAGCAGCCCA 62.899 61.111 0.00 0.00 46.54 5.36
371 372 2.444700 AATTTGCAGCACAGCAGCCC 62.445 55.000 0.00 0.00 46.54 5.19
372 373 0.601841 AAATTTGCAGCACAGCAGCC 60.602 50.000 0.00 0.00 46.54 4.85
373 374 0.511221 CAAATTTGCAGCACAGCAGC 59.489 50.000 5.01 0.00 46.54 5.25
374 375 1.144969 CCAAATTTGCAGCACAGCAG 58.855 50.000 12.92 0.00 46.54 4.24
375 376 0.249953 CCCAAATTTGCAGCACAGCA 60.250 50.000 12.92 0.00 43.99 4.41
376 377 0.952010 CCCCAAATTTGCAGCACAGC 60.952 55.000 12.92 0.00 0.00 4.40
377 378 0.952010 GCCCCAAATTTGCAGCACAG 60.952 55.000 19.85 4.20 0.00 3.66
378 379 1.071128 GCCCCAAATTTGCAGCACA 59.929 52.632 19.85 0.00 0.00 4.57
379 380 2.028733 CGCCCCAAATTTGCAGCAC 61.029 57.895 22.65 7.71 0.00 4.40
380 381 2.343018 CGCCCCAAATTTGCAGCA 59.657 55.556 22.65 0.00 0.00 4.41
381 382 3.120385 GCGCCCCAAATTTGCAGC 61.120 61.111 12.92 15.06 0.00 5.25
382 383 2.434709 GGCGCCCCAAATTTGCAG 60.435 61.111 18.11 6.96 0.00 4.41
383 384 4.370066 CGGCGCCCCAAATTTGCA 62.370 61.111 23.46 0.00 0.00 4.08
385 386 2.237534 AATCCGGCGCCCCAAATTTG 62.238 55.000 23.46 11.40 0.00 2.32
386 387 1.987306 AATCCGGCGCCCCAAATTT 60.987 52.632 23.46 3.24 0.00 1.82
387 388 2.363665 AATCCGGCGCCCCAAATT 60.364 55.556 23.46 12.39 0.00 1.82
388 389 3.146913 CAATCCGGCGCCCCAAAT 61.147 61.111 23.46 6.25 0.00 2.32
389 390 4.669809 ACAATCCGGCGCCCCAAA 62.670 61.111 23.46 3.69 0.00 3.28
401 402 4.596180 CATCCCGCGCGCACAATC 62.596 66.667 32.61 0.00 0.00 2.67
412 413 4.415150 ACCACCTGCAGCATCCCG 62.415 66.667 8.66 0.00 0.00 5.14
413 414 2.753043 CACCACCTGCAGCATCCC 60.753 66.667 8.66 0.00 0.00 3.85
414 415 3.446570 GCACCACCTGCAGCATCC 61.447 66.667 8.66 0.00 46.29 3.51
425 426 3.418744 AAAAACACGGCGGCACCAC 62.419 57.895 13.24 0.00 39.03 4.16
426 427 3.141488 AAAAACACGGCGGCACCA 61.141 55.556 13.24 0.00 39.03 4.17
440 441 5.600696 GAAGAGGTTTTCCAGATGCAAAAA 58.399 37.500 0.00 0.00 43.73 1.94
441 442 4.261572 CGAAGAGGTTTTCCAGATGCAAAA 60.262 41.667 0.00 0.00 43.73 2.44
442 443 3.253188 CGAAGAGGTTTTCCAGATGCAAA 59.747 43.478 0.00 0.00 43.73 3.68
443 444 2.813754 CGAAGAGGTTTTCCAGATGCAA 59.186 45.455 0.00 0.00 43.73 4.08
444 445 2.426522 CGAAGAGGTTTTCCAGATGCA 58.573 47.619 0.00 0.00 43.73 3.96
445 446 1.131315 GCGAAGAGGTTTTCCAGATGC 59.869 52.381 0.00 0.00 43.73 3.91
446 447 1.740025 GGCGAAGAGGTTTTCCAGATG 59.260 52.381 0.00 0.00 43.73 2.90
447 448 1.676014 CGGCGAAGAGGTTTTCCAGAT 60.676 52.381 0.00 0.00 43.73 2.90
448 449 0.320421 CGGCGAAGAGGTTTTCCAGA 60.320 55.000 0.00 0.00 43.73 3.86
449 450 1.912371 GCGGCGAAGAGGTTTTCCAG 61.912 60.000 12.98 0.00 43.73 3.86
450 451 1.964373 GCGGCGAAGAGGTTTTCCA 60.964 57.895 12.98 0.00 43.73 3.53
451 452 1.636570 GAGCGGCGAAGAGGTTTTCC 61.637 60.000 12.98 0.00 41.05 3.13
452 453 1.636570 GGAGCGGCGAAGAGGTTTTC 61.637 60.000 12.98 0.00 0.00 2.29
453 454 1.671379 GGAGCGGCGAAGAGGTTTT 60.671 57.895 12.98 0.00 0.00 2.43
454 455 2.047179 GGAGCGGCGAAGAGGTTT 60.047 61.111 12.98 0.00 0.00 3.27
455 456 4.083862 GGGAGCGGCGAAGAGGTT 62.084 66.667 12.98 0.00 0.00 3.50
468 469 1.207593 CAGTCTTTTTGCGCGGGAG 59.792 57.895 8.83 0.00 0.00 4.30
469 470 1.098712 AACAGTCTTTTTGCGCGGGA 61.099 50.000 8.83 0.00 0.00 5.14
470 471 0.248866 AAACAGTCTTTTTGCGCGGG 60.249 50.000 8.83 0.00 0.00 6.13
471 472 1.555477 AAAACAGTCTTTTTGCGCGG 58.445 45.000 8.83 0.00 0.00 6.46
472 473 3.177643 CACTAAAACAGTCTTTTTGCGCG 59.822 43.478 0.00 0.00 34.26 6.86
473 474 3.061205 GCACTAAAACAGTCTTTTTGCGC 60.061 43.478 0.00 0.00 34.26 6.09
474 475 4.204978 CAGCACTAAAACAGTCTTTTTGCG 59.795 41.667 0.00 0.00 34.26 4.85
475 476 5.102313 ACAGCACTAAAACAGTCTTTTTGC 58.898 37.500 0.00 0.00 34.26 3.68
476 477 8.682128 TTTACAGCACTAAAACAGTCTTTTTG 57.318 30.769 0.00 0.00 34.26 2.44
477 478 9.353999 CTTTTACAGCACTAAAACAGTCTTTTT 57.646 29.630 0.00 0.00 34.26 1.94
478 479 8.736244 TCTTTTACAGCACTAAAACAGTCTTTT 58.264 29.630 0.00 0.00 34.26 2.27
479 480 8.276252 TCTTTTACAGCACTAAAACAGTCTTT 57.724 30.769 0.00 0.00 34.26 2.52
480 481 7.859325 TCTTTTACAGCACTAAAACAGTCTT 57.141 32.000 0.00 0.00 34.26 3.01
481 482 7.859325 TTCTTTTACAGCACTAAAACAGTCT 57.141 32.000 0.00 0.00 34.26 3.24
488 489 8.392612 GCGGTATAATTCTTTTACAGCACTAAA 58.607 33.333 7.37 0.00 37.12 1.85
489 490 7.254185 CGCGGTATAATTCTTTTACAGCACTAA 60.254 37.037 0.00 0.00 37.02 2.24
490 491 6.199531 CGCGGTATAATTCTTTTACAGCACTA 59.800 38.462 0.00 0.00 37.02 2.74
491 492 5.006358 CGCGGTATAATTCTTTTACAGCACT 59.994 40.000 0.00 0.00 37.02 4.40
492 493 5.195379 CGCGGTATAATTCTTTTACAGCAC 58.805 41.667 0.00 0.00 37.02 4.40
493 494 4.260456 GCGCGGTATAATTCTTTTACAGCA 60.260 41.667 8.83 0.00 37.02 4.41
494 495 4.209112 GCGCGGTATAATTCTTTTACAGC 58.791 43.478 8.83 0.00 34.87 4.40
495 496 4.607557 CGGCGCGGTATAATTCTTTTACAG 60.608 45.833 8.83 0.00 0.00 2.74
496 497 3.245754 CGGCGCGGTATAATTCTTTTACA 59.754 43.478 8.83 0.00 0.00 2.41
497 498 3.490526 TCGGCGCGGTATAATTCTTTTAC 59.509 43.478 15.06 0.00 0.00 2.01
498 499 3.715495 TCGGCGCGGTATAATTCTTTTA 58.285 40.909 15.06 0.00 0.00 1.52
499 500 2.542595 CTCGGCGCGGTATAATTCTTTT 59.457 45.455 15.06 0.00 0.00 2.27
500 501 2.132762 CTCGGCGCGGTATAATTCTTT 58.867 47.619 15.06 0.00 0.00 2.52
501 502 1.604693 CCTCGGCGCGGTATAATTCTT 60.605 52.381 15.06 0.00 0.00 2.52
502 503 0.038526 CCTCGGCGCGGTATAATTCT 60.039 55.000 15.06 0.00 0.00 2.40
503 504 1.623973 GCCTCGGCGCGGTATAATTC 61.624 60.000 18.18 0.00 0.00 2.17
504 505 1.666872 GCCTCGGCGCGGTATAATT 60.667 57.895 18.18 0.00 0.00 1.40
505 506 2.048503 GCCTCGGCGCGGTATAAT 60.049 61.111 18.18 0.00 0.00 1.28
518 519 4.681978 ACACGGGTGCTTCGCCTC 62.682 66.667 0.00 0.00 33.98 4.70
519 520 4.250305 AACACGGGTGCTTCGCCT 62.250 61.111 0.00 0.00 33.98 5.52
520 521 4.025401 CAACACGGGTGCTTCGCC 62.025 66.667 0.00 0.00 0.00 5.54
521 522 2.443957 CTTCAACACGGGTGCTTCGC 62.444 60.000 0.00 0.00 0.00 4.70
522 523 0.878523 TCTTCAACACGGGTGCTTCG 60.879 55.000 0.00 0.00 0.00 3.79
523 524 1.197721 CATCTTCAACACGGGTGCTTC 59.802 52.381 0.00 0.00 0.00 3.86
524 525 1.238439 CATCTTCAACACGGGTGCTT 58.762 50.000 0.00 0.00 0.00 3.91
525 526 1.237285 GCATCTTCAACACGGGTGCT 61.237 55.000 0.00 0.00 0.00 4.40
526 527 1.210155 GCATCTTCAACACGGGTGC 59.790 57.895 0.00 0.00 0.00 5.01
527 528 2.093306 TAGCATCTTCAACACGGGTG 57.907 50.000 0.00 0.00 0.00 4.61
528 529 2.038557 ACTTAGCATCTTCAACACGGGT 59.961 45.455 0.00 0.00 0.00 5.28
529 530 2.699954 ACTTAGCATCTTCAACACGGG 58.300 47.619 0.00 0.00 0.00 5.28
530 531 6.422776 AATAACTTAGCATCTTCAACACGG 57.577 37.500 0.00 0.00 0.00 4.94
531 532 8.728088 AAAAATAACTTAGCATCTTCAACACG 57.272 30.769 0.00 0.00 0.00 4.49
555 556 5.937540 TCATCTCATCTTGCCGACTTAAAAA 59.062 36.000 0.00 0.00 0.00 1.94
556 557 5.351465 GTCATCTCATCTTGCCGACTTAAAA 59.649 40.000 0.00 0.00 0.00 1.52
557 558 4.870426 GTCATCTCATCTTGCCGACTTAAA 59.130 41.667 0.00 0.00 0.00 1.52
558 559 4.081697 TGTCATCTCATCTTGCCGACTTAA 60.082 41.667 0.00 0.00 0.00 1.85
559 560 3.447229 TGTCATCTCATCTTGCCGACTTA 59.553 43.478 0.00 0.00 0.00 2.24
560 561 2.234661 TGTCATCTCATCTTGCCGACTT 59.765 45.455 0.00 0.00 0.00 3.01
561 562 1.827344 TGTCATCTCATCTTGCCGACT 59.173 47.619 0.00 0.00 0.00 4.18
562 563 2.299993 TGTCATCTCATCTTGCCGAC 57.700 50.000 0.00 0.00 0.00 4.79
563 564 2.830104 CATGTCATCTCATCTTGCCGA 58.170 47.619 0.00 0.00 0.00 5.54
564 565 1.263484 GCATGTCATCTCATCTTGCCG 59.737 52.381 0.00 0.00 0.00 5.69
565 566 2.290916 CAGCATGTCATCTCATCTTGCC 59.709 50.000 0.00 0.00 34.35 4.52
566 567 2.290916 CCAGCATGTCATCTCATCTTGC 59.709 50.000 0.00 0.00 34.14 4.01
567 568 2.290916 GCCAGCATGTCATCTCATCTTG 59.709 50.000 0.00 0.00 0.00 3.02
568 569 2.172930 AGCCAGCATGTCATCTCATCTT 59.827 45.455 0.00 0.00 0.00 2.40
572 573 0.906775 TCAGCCAGCATGTCATCTCA 59.093 50.000 0.00 0.00 0.00 3.27
580 581 0.607217 TGGACAAGTCAGCCAGCATG 60.607 55.000 2.29 0.00 0.00 4.06
600 601 9.533253 CCAAAAGAAACAGTTCATGATTTACTT 57.467 29.630 0.00 0.00 36.09 2.24
601 602 8.143835 CCCAAAAGAAACAGTTCATGATTTACT 58.856 33.333 0.00 0.00 36.09 2.24
610 611 5.478679 TCAAAGTCCCAAAAGAAACAGTTCA 59.521 36.000 0.00 0.00 36.09 3.18
647 651 0.951558 TTTTCTTTGCCGAGCAGTCC 59.048 50.000 0.00 0.00 40.61 3.85
652 656 5.048153 AGATTAGTTTTTCTTTGCCGAGC 57.952 39.130 0.00 0.00 0.00 5.03
656 660 8.730680 TGTCTATGAGATTAGTTTTTCTTTGCC 58.269 33.333 0.00 0.00 0.00 4.52
753 758 3.690139 AGTATGTAGTCTGAGTGTGGTCG 59.310 47.826 0.00 0.00 0.00 4.79
763 768 4.158579 TGGAAGTGAGCAGTATGTAGTCTG 59.841 45.833 0.00 0.00 39.31 3.51
764 769 4.344978 TGGAAGTGAGCAGTATGTAGTCT 58.655 43.478 0.00 0.00 39.31 3.24
769 780 3.261643 TGTCATGGAAGTGAGCAGTATGT 59.738 43.478 0.00 0.00 39.31 2.29
900 912 4.560108 CGAAACGGACAGGGTATATAAGGG 60.560 50.000 0.00 0.00 0.00 3.95
960 972 3.458163 CGGCGGAGGAGTTAGGCA 61.458 66.667 0.00 0.00 0.00 4.75
964 976 3.818787 GCGTCGGCGGAGGAGTTA 61.819 66.667 13.05 0.00 38.78 2.24
1263 1278 5.153950 ACTTCTTCTTGGAGACCATGTAC 57.846 43.478 0.00 0.00 31.53 2.90
1328 1343 2.407210 GAGACGGCGAGAGAGCAG 59.593 66.667 16.62 0.00 39.27 4.24
1357 1375 3.587061 TCACACCACCACATAGGAAGAAT 59.413 43.478 0.00 0.00 41.22 2.40
1361 1379 4.078537 CAAATCACACCACCACATAGGAA 58.921 43.478 0.00 0.00 41.22 3.36
1362 1380 3.561097 CCAAATCACACCACCACATAGGA 60.561 47.826 0.00 0.00 41.22 2.94
1363 1381 2.754552 CCAAATCACACCACCACATAGG 59.245 50.000 0.00 0.00 45.67 2.57
1364 1382 2.164219 GCCAAATCACACCACCACATAG 59.836 50.000 0.00 0.00 0.00 2.23
1365 1383 2.166829 GCCAAATCACACCACCACATA 58.833 47.619 0.00 0.00 0.00 2.29
1370 1388 0.605319 TCGAGCCAAATCACACCACC 60.605 55.000 0.00 0.00 0.00 4.61
1447 1465 0.533308 CTCCCGTCCCGTGACAAAAA 60.533 55.000 0.00 0.00 41.85 1.94
1655 1696 2.745968 ACCCAGATCACTTCCTCTCTC 58.254 52.381 0.00 0.00 0.00 3.20
1656 1697 2.938428 ACCCAGATCACTTCCTCTCT 57.062 50.000 0.00 0.00 0.00 3.10
1678 1719 8.149647 AGTCATCTGGTGAAAAATTGCATTTAA 58.850 29.630 0.00 0.00 38.90 1.52
1688 1729 5.034852 TCAGTCAGTCATCTGGTGAAAAA 57.965 39.130 0.00 0.00 41.59 1.94
1768 1834 1.985116 GGACGGAGGGAGCACTTCT 60.985 63.158 0.00 0.00 0.00 2.85
1769 1835 2.579738 GGACGGAGGGAGCACTTC 59.420 66.667 0.00 0.00 0.00 3.01
1770 1836 3.003763 GGGACGGAGGGAGCACTT 61.004 66.667 0.00 0.00 0.00 3.16
1771 1837 3.846405 TTGGGACGGAGGGAGCACT 62.846 63.158 0.00 0.00 0.00 4.40
1772 1838 2.406002 TTTTGGGACGGAGGGAGCAC 62.406 60.000 0.00 0.00 0.00 4.40
1773 1839 1.497309 ATTTTGGGACGGAGGGAGCA 61.497 55.000 0.00 0.00 0.00 4.26
1774 1840 0.544697 TATTTTGGGACGGAGGGAGC 59.455 55.000 0.00 0.00 0.00 4.70
1775 1841 1.141053 CCTATTTTGGGACGGAGGGAG 59.859 57.143 0.00 0.00 0.00 4.30
1776 1842 1.209621 CCTATTTTGGGACGGAGGGA 58.790 55.000 0.00 0.00 0.00 4.20
1777 1843 0.465642 GCCTATTTTGGGACGGAGGG 60.466 60.000 0.00 0.00 0.00 4.30
1778 1844 0.814010 CGCCTATTTTGGGACGGAGG 60.814 60.000 0.00 0.00 0.00 4.30
1779 1845 0.177141 TCGCCTATTTTGGGACGGAG 59.823 55.000 0.00 0.00 0.00 4.63
1780 1846 0.108041 GTCGCCTATTTTGGGACGGA 60.108 55.000 0.00 0.00 0.00 4.69
1781 1847 0.107848 AGTCGCCTATTTTGGGACGG 60.108 55.000 0.00 0.00 34.61 4.79
1782 1848 1.287425 GAGTCGCCTATTTTGGGACG 58.713 55.000 0.00 0.00 34.61 4.79
1783 1849 2.396590 TGAGTCGCCTATTTTGGGAC 57.603 50.000 0.00 0.00 0.00 4.46
1784 1850 2.304761 AGTTGAGTCGCCTATTTTGGGA 59.695 45.455 0.00 0.00 0.00 4.37
1785 1851 2.711542 AGTTGAGTCGCCTATTTTGGG 58.288 47.619 0.00 0.00 0.00 4.12
1786 1852 4.023193 ACAAAGTTGAGTCGCCTATTTTGG 60.023 41.667 0.00 0.00 0.00 3.28
1787 1853 5.108385 ACAAAGTTGAGTCGCCTATTTTG 57.892 39.130 0.00 0.00 0.00 2.44
1788 1854 5.995897 AGTACAAAGTTGAGTCGCCTATTTT 59.004 36.000 0.00 0.00 0.00 1.82
1789 1855 5.548406 AGTACAAAGTTGAGTCGCCTATTT 58.452 37.500 0.00 0.00 0.00 1.40
1790 1856 5.148651 AGTACAAAGTTGAGTCGCCTATT 57.851 39.130 0.00 0.00 0.00 1.73
1791 1857 4.803098 AGTACAAAGTTGAGTCGCCTAT 57.197 40.909 0.00 0.00 0.00 2.57
1792 1858 5.242393 AGTTAGTACAAAGTTGAGTCGCCTA 59.758 40.000 0.00 0.00 0.00 3.93
1793 1859 4.038883 AGTTAGTACAAAGTTGAGTCGCCT 59.961 41.667 0.00 0.00 0.00 5.52
1794 1860 4.304939 AGTTAGTACAAAGTTGAGTCGCC 58.695 43.478 0.00 0.00 0.00 5.54
1795 1861 5.902051 AAGTTAGTACAAAGTTGAGTCGC 57.098 39.130 0.00 0.00 0.00 5.19
1796 1862 7.224167 AGGAAAAGTTAGTACAAAGTTGAGTCG 59.776 37.037 0.00 0.00 0.00 4.18
1797 1863 8.434733 AGGAAAAGTTAGTACAAAGTTGAGTC 57.565 34.615 0.00 0.00 0.00 3.36
1798 1864 8.265764 AGAGGAAAAGTTAGTACAAAGTTGAGT 58.734 33.333 0.00 0.00 0.00 3.41
1799 1865 8.552034 CAGAGGAAAAGTTAGTACAAAGTTGAG 58.448 37.037 0.00 0.00 0.00 3.02
1800 1866 8.044908 ACAGAGGAAAAGTTAGTACAAAGTTGA 58.955 33.333 0.00 0.00 0.00 3.18
1801 1867 8.209917 ACAGAGGAAAAGTTAGTACAAAGTTG 57.790 34.615 0.00 0.00 0.00 3.16
1802 1868 7.498239 GGACAGAGGAAAAGTTAGTACAAAGTT 59.502 37.037 0.00 0.00 0.00 2.66
1803 1869 6.990939 GGACAGAGGAAAAGTTAGTACAAAGT 59.009 38.462 0.00 0.00 0.00 2.66
1804 1870 6.427242 GGGACAGAGGAAAAGTTAGTACAAAG 59.573 42.308 0.00 0.00 0.00 2.77
1805 1871 6.126710 TGGGACAGAGGAAAAGTTAGTACAAA 60.127 38.462 0.00 0.00 0.00 2.83
1806 1872 5.367352 TGGGACAGAGGAAAAGTTAGTACAA 59.633 40.000 0.00 0.00 0.00 2.41
1807 1873 4.903049 TGGGACAGAGGAAAAGTTAGTACA 59.097 41.667 0.00 0.00 0.00 2.90
1808 1874 5.479124 TGGGACAGAGGAAAAGTTAGTAC 57.521 43.478 0.00 0.00 0.00 2.73
1809 1875 6.503560 TTTGGGACAGAGGAAAAGTTAGTA 57.496 37.500 0.00 0.00 42.39 1.82
1810 1876 5.382664 TTTGGGACAGAGGAAAAGTTAGT 57.617 39.130 0.00 0.00 42.39 2.24
1819 1885 4.597507 AGTCACTTATTTTGGGACAGAGGA 59.402 41.667 0.00 0.00 42.39 3.71
1827 1893 6.805713 ACAAAGTTGAGTCACTTATTTTGGG 58.194 36.000 12.94 0.00 35.87 4.12
1835 1901 9.530633 CTAAGTTAGTACAAAGTTGAGTCACTT 57.469 33.333 1.40 0.00 38.74 3.16
1836 1902 8.142551 CCTAAGTTAGTACAAAGTTGAGTCACT 58.857 37.037 9.05 0.00 0.00 3.41
1837 1903 7.384387 CCCTAAGTTAGTACAAAGTTGAGTCAC 59.616 40.741 9.05 0.00 0.00 3.67
1838 1904 7.288389 TCCCTAAGTTAGTACAAAGTTGAGTCA 59.712 37.037 9.05 0.00 0.00 3.41
1839 1905 7.664758 TCCCTAAGTTAGTACAAAGTTGAGTC 58.335 38.462 9.05 0.00 0.00 3.36
1840 1906 7.289549 ACTCCCTAAGTTAGTACAAAGTTGAGT 59.710 37.037 9.05 4.18 33.03 3.41
1841 1907 7.668492 ACTCCCTAAGTTAGTACAAAGTTGAG 58.332 38.462 9.05 3.69 33.03 3.02
1842 1908 7.607615 ACTCCCTAAGTTAGTACAAAGTTGA 57.392 36.000 9.05 0.00 33.03 3.18
1850 1916 6.992715 TCCGTATGTACTCCCTAAGTTAGTAC 59.007 42.308 9.05 7.74 43.75 2.73
1852 1918 5.825151 GTCCGTATGTACTCCCTAAGTTAGT 59.175 44.000 9.05 0.00 39.55 2.24
1856 1922 4.080129 TCAGTCCGTATGTACTCCCTAAGT 60.080 45.833 0.00 0.00 42.33 2.24
1857 1923 4.458397 TCAGTCCGTATGTACTCCCTAAG 58.542 47.826 0.00 0.00 0.00 2.18
1858 1924 4.508551 TCAGTCCGTATGTACTCCCTAA 57.491 45.455 0.00 0.00 0.00 2.69
1859 1925 4.508551 TTCAGTCCGTATGTACTCCCTA 57.491 45.455 0.00 0.00 0.00 3.53
1860 1926 3.377253 TTCAGTCCGTATGTACTCCCT 57.623 47.619 0.00 0.00 0.00 4.20
1861 1927 4.098960 TCATTTCAGTCCGTATGTACTCCC 59.901 45.833 0.00 0.00 0.00 4.30
1862 1928 5.258456 TCATTTCAGTCCGTATGTACTCC 57.742 43.478 0.00 0.00 0.00 3.85
1863 1929 4.740695 GCTCATTTCAGTCCGTATGTACTC 59.259 45.833 0.00 0.00 0.00 2.59
1992 2061 3.369471 GCAAGCAATACAGGAGTACAGGA 60.369 47.826 0.00 0.00 31.96 3.86
1993 2062 2.939103 GCAAGCAATACAGGAGTACAGG 59.061 50.000 0.00 0.00 31.96 4.00
1994 2063 3.599343 TGCAAGCAATACAGGAGTACAG 58.401 45.455 0.00 0.00 31.96 2.74
1995 2064 3.007940 ACTGCAAGCAATACAGGAGTACA 59.992 43.478 0.00 0.00 37.60 2.90
1996 2065 3.600388 ACTGCAAGCAATACAGGAGTAC 58.400 45.455 0.00 0.00 37.60 2.73
1997 2066 3.981071 ACTGCAAGCAATACAGGAGTA 57.019 42.857 0.00 0.00 37.60 2.59
1998 2067 2.816087 CAACTGCAAGCAATACAGGAGT 59.184 45.455 0.00 0.00 37.60 3.85
1999 2068 2.163010 CCAACTGCAAGCAATACAGGAG 59.837 50.000 0.00 0.00 37.60 3.69
2280 2483 5.450453 TGCTACTCTATCACTTTAGGCTCT 58.550 41.667 0.00 0.00 0.00 4.09
2295 2498 4.397730 CGCTCAGTCCATATATGCTACTCT 59.602 45.833 7.24 0.00 0.00 3.24
2296 2499 4.396478 TCGCTCAGTCCATATATGCTACTC 59.604 45.833 7.24 1.67 0.00 2.59
2297 2500 4.336280 TCGCTCAGTCCATATATGCTACT 58.664 43.478 7.24 9.66 0.00 2.57
2298 2501 4.703645 TCGCTCAGTCCATATATGCTAC 57.296 45.455 7.24 7.62 0.00 3.58
2299 2502 6.357367 TCTATCGCTCAGTCCATATATGCTA 58.643 40.000 7.24 0.00 0.00 3.49
2300 2503 5.196695 TCTATCGCTCAGTCCATATATGCT 58.803 41.667 7.24 0.00 0.00 3.79
2391 2596 3.272334 CCTCGCGCCAAGGTATGC 61.272 66.667 13.99 0.00 0.00 3.14
2452 2748 5.820947 GGACCCTCACGTGAATATACAATTT 59.179 40.000 20.49 0.00 0.00 1.82
2483 2779 8.341173 CCAACAAAAGCAACATTATTTAGCAAA 58.659 29.630 0.00 0.00 0.00 3.68
2544 2840 7.193595 TCTTACAGTAAGAACTTTGCTTTTGC 58.806 34.615 19.07 0.00 41.53 3.68
2560 2856 3.380637 GCCAGAGACCGATTCTTACAGTA 59.619 47.826 0.00 0.00 33.22 2.74
2643 2939 9.784531 CCATGAAAGAGAATATGGTGTACTATT 57.215 33.333 0.00 0.00 36.25 1.73
2644 2940 7.880195 GCCATGAAAGAGAATATGGTGTACTAT 59.120 37.037 0.00 0.00 41.62 2.12
2645 2941 7.147567 TGCCATGAAAGAGAATATGGTGTACTA 60.148 37.037 0.00 0.00 41.62 1.82
2646 2942 6.058183 GCCATGAAAGAGAATATGGTGTACT 58.942 40.000 0.00 0.00 41.62 2.73
2647 2943 5.822519 TGCCATGAAAGAGAATATGGTGTAC 59.177 40.000 0.00 0.00 41.62 2.90
2648 2944 6.000246 TGCCATGAAAGAGAATATGGTGTA 58.000 37.500 0.00 0.00 41.62 2.90
2649 2945 4.858850 TGCCATGAAAGAGAATATGGTGT 58.141 39.130 0.00 0.00 41.62 4.16
2709 3005 7.384115 GTGCTATGTCTGTCAACTAAACTACAA 59.616 37.037 0.00 0.00 0.00 2.41
2710 3006 6.866770 GTGCTATGTCTGTCAACTAAACTACA 59.133 38.462 0.00 0.00 0.00 2.74
2711 3007 6.866770 TGTGCTATGTCTGTCAACTAAACTAC 59.133 38.462 0.00 0.00 0.00 2.73
2712 3008 6.866770 GTGTGCTATGTCTGTCAACTAAACTA 59.133 38.462 0.00 0.00 0.00 2.24
2713 3009 5.696724 GTGTGCTATGTCTGTCAACTAAACT 59.303 40.000 0.00 0.00 0.00 2.66
2758 3057 5.410355 ACAATGGCAGCAAGATAACAAAT 57.590 34.783 0.00 0.00 0.00 2.32
2826 3125 1.000506 CAATGGGCTAATGGCATCTGC 59.999 52.381 13.91 13.91 44.01 4.26
2827 3126 1.000506 GCAATGGGCTAATGGCATCTG 59.999 52.381 0.00 0.00 44.01 2.90
2829 3128 3.900446 GCAATGGGCTAATGGCATC 57.100 52.632 0.00 0.00 44.01 3.91
3111 3413 7.602517 AAATTCTCACCTGTTATTTCTCTCG 57.397 36.000 0.00 0.00 0.00 4.04
3249 3593 2.627945 GCGAGGTTCATTCCACACATA 58.372 47.619 0.00 0.00 0.00 2.29
3394 3738 6.775629 ACAGACATACCACCAAATACAGTTTT 59.224 34.615 0.00 0.00 0.00 2.43
3405 3749 2.039613 TGCATTCACAGACATACCACCA 59.960 45.455 0.00 0.00 0.00 4.17
3410 3754 5.611796 TCAGTTTGCATTCACAGACATAC 57.388 39.130 0.00 0.00 0.00 2.39
3681 4029 3.566351 TGAGAGAGTCACAGACTGGAAA 58.434 45.455 7.51 0.00 43.53 3.13
3931 4279 7.795047 TCAGTATGGATAGTTCACATGAACAT 58.205 34.615 23.12 15.23 46.32 2.71
4017 4365 5.045869 CAGTTGTCCAGGGAAGAAGGTAATA 60.046 44.000 0.00 0.00 0.00 0.98
4018 4366 3.916989 AGTTGTCCAGGGAAGAAGGTAAT 59.083 43.478 0.00 0.00 0.00 1.89
4239 4665 7.257790 TCCCTTTTCTCTGAATGAACATCTA 57.742 36.000 0.00 0.00 0.00 1.98
4268 4721 6.613679 TGTGATGTATACTATGAAACCAGGGA 59.386 38.462 4.17 0.00 0.00 4.20
4282 4735 1.543429 GGGGGCTGCTGTGATGTATAC 60.543 57.143 0.00 0.00 0.00 1.47
4283 4736 0.764890 GGGGGCTGCTGTGATGTATA 59.235 55.000 0.00 0.00 0.00 1.47
4284 4737 1.533711 GGGGGCTGCTGTGATGTAT 59.466 57.895 0.00 0.00 0.00 2.29
4285 4738 2.998097 GGGGGCTGCTGTGATGTA 59.002 61.111 0.00 0.00 0.00 2.29
4303 4756 1.065928 GTAGTCTGCATCCGGTCCG 59.934 63.158 3.60 3.60 0.00 4.79
4305 4758 2.361119 TGTATGTAGTCTGCATCCGGTC 59.639 50.000 6.71 0.00 0.00 4.79
4306 4759 2.384828 TGTATGTAGTCTGCATCCGGT 58.615 47.619 6.71 0.00 0.00 5.28
4307 4760 3.667497 ATGTATGTAGTCTGCATCCGG 57.333 47.619 6.71 0.00 0.00 5.14
4309 4762 4.926238 GCTGTATGTATGTAGTCTGCATCC 59.074 45.833 6.71 0.00 0.00 3.51
4311 4764 5.163416 TGTGCTGTATGTATGTAGTCTGCAT 60.163 40.000 8.57 8.57 33.86 3.96
4316 4769 7.827819 TTTCTTGTGCTGTATGTATGTAGTC 57.172 36.000 0.00 0.00 0.00 2.59
4317 4770 7.659799 TGTTTTCTTGTGCTGTATGTATGTAGT 59.340 33.333 0.00 0.00 0.00 2.73
4319 4772 7.971183 TGTTTTCTTGTGCTGTATGTATGTA 57.029 32.000 0.00 0.00 0.00 2.29
4320 4773 6.875948 TGTTTTCTTGTGCTGTATGTATGT 57.124 33.333 0.00 0.00 0.00 2.29
4321 4774 8.882736 TCTATGTTTTCTTGTGCTGTATGTATG 58.117 33.333 0.00 0.00 0.00 2.39
4344 4928 4.530553 TGGCGATCTTTTATATGGCCTCTA 59.469 41.667 3.32 0.00 45.50 2.43
4354 4938 2.351726 GCTCGTGTTGGCGATCTTTTAT 59.648 45.455 0.00 0.00 40.29 1.40
4356 4940 0.517316 GCTCGTGTTGGCGATCTTTT 59.483 50.000 0.00 0.00 40.29 2.27
4409 4993 2.444351 GTGCTTGCGATCTTTACATGC 58.556 47.619 0.00 0.00 35.64 4.06
4410 4994 2.419673 TGGTGCTTGCGATCTTTACATG 59.580 45.455 0.00 0.00 0.00 3.21
4411 4995 2.679837 CTGGTGCTTGCGATCTTTACAT 59.320 45.455 0.00 0.00 0.00 2.29
4412 4996 2.076100 CTGGTGCTTGCGATCTTTACA 58.924 47.619 0.00 0.00 0.00 2.41
4413 4997 1.202076 GCTGGTGCTTGCGATCTTTAC 60.202 52.381 0.00 0.00 36.03 2.01
4414 4998 1.086696 GCTGGTGCTTGCGATCTTTA 58.913 50.000 0.00 0.00 36.03 1.85
4415 4999 1.878775 GCTGGTGCTTGCGATCTTT 59.121 52.632 0.00 0.00 36.03 2.52
4422 5006 3.782244 CTCGACGCTGGTGCTTGC 61.782 66.667 0.00 0.00 36.97 4.01
4423 5007 3.114616 CCTCGACGCTGGTGCTTG 61.115 66.667 0.00 0.00 36.97 4.01
4424 5008 3.303135 TCCTCGACGCTGGTGCTT 61.303 61.111 6.61 0.00 36.97 3.91
4443 5027 1.965754 AAGGAGATGCGCCCTGACTC 61.966 60.000 4.18 6.41 32.12 3.36
4493 5077 1.973281 ACTGAACTGCCCCGCATTG 60.973 57.895 0.00 0.00 38.13 2.82
4501 5085 1.620822 ATGGAAACCACTGAACTGCC 58.379 50.000 0.00 0.00 35.80 4.85
4507 5091 2.562298 GGCATGAAATGGAAACCACTGA 59.438 45.455 0.00 0.00 46.86 3.41
4508 5092 2.299582 TGGCATGAAATGGAAACCACTG 59.700 45.455 0.00 0.00 46.86 3.66
4557 5186 5.473796 TGTCGAGTTGTTTACAAACCTTC 57.526 39.130 2.55 0.00 37.63 3.46
4605 5234 7.821359 ACATATCCGGTCATCAAGAAATCATAG 59.179 37.037 0.00 0.00 0.00 2.23
4682 5312 1.329913 TATTGCTCTGCTCTGGCCGA 61.330 55.000 0.00 0.00 37.74 5.54
4683 5313 0.879400 CTATTGCTCTGCTCTGGCCG 60.879 60.000 0.00 0.00 37.74 6.13
4689 5319 0.833287 TCCACCCTATTGCTCTGCTC 59.167 55.000 0.00 0.00 0.00 4.26
4724 5354 0.594602 CATGGGCTGTTGTGTCTGTG 59.405 55.000 0.00 0.00 0.00 3.66
4725 5355 0.183492 ACATGGGCTGTTGTGTCTGT 59.817 50.000 0.00 0.00 32.90 3.41
4745 5377 5.786401 ATAGAAATCACAAGTTCGTGCTC 57.214 39.130 0.00 0.00 34.72 4.26
4751 5383 9.606631 AGATACCTGAATAGAAATCACAAGTTC 57.393 33.333 0.00 0.00 0.00 3.01
4852 5484 3.034721 ACCGCAACGATACTTCAGAAA 57.965 42.857 0.00 0.00 0.00 2.52
4860 5492 2.477375 TCAAACTCAACCGCAACGATAC 59.523 45.455 0.00 0.00 0.00 2.24
4862 5494 1.531149 CTCAAACTCAACCGCAACGAT 59.469 47.619 0.00 0.00 0.00 3.73
4864 5496 0.934496 TCTCAAACTCAACCGCAACG 59.066 50.000 0.00 0.00 0.00 4.10
4867 5499 4.647424 AAATTTCTCAAACTCAACCGCA 57.353 36.364 0.00 0.00 0.00 5.69
4870 5502 4.511454 GGCCAAAATTTCTCAAACTCAACC 59.489 41.667 0.00 0.00 0.00 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.