Multiple sequence alignment - TraesCS2B01G199300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G199300 chr2B 100.000 3168 0 0 1 3168 177582467 177585634 0.000000e+00 5851
1 TraesCS2B01G199300 chr2B 96.035 454 16 2 1 454 177549320 177549771 0.000000e+00 737
2 TraesCS2B01G199300 chr2D 95.806 1359 51 4 1731 3083 124803416 124804774 0.000000e+00 2189
3 TraesCS2B01G199300 chr2D 93.470 536 20 11 909 1435 124802506 124803035 0.000000e+00 782
4 TraesCS2B01G199300 chr2D 84.286 210 14 9 1531 1733 124803072 124803269 1.500000e-43 187
5 TraesCS2B01G199300 chr2D 80.702 228 23 8 455 677 124800709 124800920 1.180000e-34 158
6 TraesCS2B01G199300 chr2D 94.186 86 5 0 750 835 124802129 124802214 7.130000e-27 132
7 TraesCS2B01G199300 chr2A 90.052 1156 86 16 1530 2673 130717897 130719035 0.000000e+00 1471
8 TraesCS2B01G199300 chr2A 87.462 662 33 18 890 1513 130717264 130717913 0.000000e+00 717
9 TraesCS2B01G199300 chr2A 89.610 462 36 6 2672 3121 130719117 130719578 7.620000e-161 577
10 TraesCS2B01G199300 chr2A 86.589 343 34 5 475 812 130716919 130717254 4.990000e-98 368
11 TraesCS2B01G199300 chr2A 81.773 203 37 0 1948 2150 584049858 584050060 1.510000e-38 171
12 TraesCS2B01G199300 chr6B 95.815 454 14 3 1 454 87771400 87771848 0.000000e+00 728
13 TraesCS2B01G199300 chr1B 94.805 462 16 7 1 460 652309754 652309299 0.000000e+00 713
14 TraesCS2B01G199300 chr1B 95.154 454 14 5 1 454 631725695 631726140 0.000000e+00 710
15 TraesCS2B01G199300 chr1B 95.143 453 14 5 1 453 481106434 481106878 0.000000e+00 708
16 TraesCS2B01G199300 chr3D 95.165 455 14 6 1 454 1829373 1828926 0.000000e+00 712
17 TraesCS2B01G199300 chr3D 94.956 456 15 5 1 456 379560149 379560596 0.000000e+00 708
18 TraesCS2B01G199300 chr4D 94.945 455 19 3 1 454 24380678 24380227 0.000000e+00 710
19 TraesCS2B01G199300 chr5B 94.397 464 17 6 1 464 181438726 181438272 0.000000e+00 704


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G199300 chr2B 177582467 177585634 3167 False 5851.00 5851 100.00000 1 3168 1 chr2B.!!$F2 3167
1 TraesCS2B01G199300 chr2D 124800709 124804774 4065 False 689.60 2189 89.69000 455 3083 5 chr2D.!!$F1 2628
2 TraesCS2B01G199300 chr2A 130716919 130719578 2659 False 783.25 1471 88.42825 475 3121 4 chr2A.!!$F2 2646

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
344 345 0.034896 TTCCACGCAAAGGAGAGTCC 59.965 55.0 0.00 0.00 36.33 3.85 F
407 408 0.105964 TCCATTCGGTCCGGCATAAG 59.894 55.0 12.29 0.09 0.00 1.73 F
1305 2693 0.107459 GCCCACATTCCCTCTCAGAC 60.107 60.0 0.00 0.00 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1224 2612 0.116342 TACTCAAGTCCCAGGGAGCA 59.884 55.000 9.15 0.0 29.39 4.26 R
1757 3341 2.031870 AGCCCAAACCAAGAACAAGAC 58.968 47.619 0.00 0.0 0.00 3.01 R
2539 4131 1.611977 TCTTCCTACACCTGTCACACG 59.388 52.381 0.00 0.0 0.00 4.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.717313 GGGGGTCCCGAACTGTGC 62.717 72.222 0.48 0.00 36.85 4.57
25 26 4.309950 GGGTCCCGAACTGTGCGT 62.310 66.667 7.51 0.00 0.00 5.24
26 27 2.737376 GGTCCCGAACTGTGCGTC 60.737 66.667 7.51 0.00 0.00 5.19
27 28 2.338984 GTCCCGAACTGTGCGTCT 59.661 61.111 7.51 0.00 0.00 4.18
28 29 1.582968 GTCCCGAACTGTGCGTCTA 59.417 57.895 7.51 0.00 0.00 2.59
29 30 0.038892 GTCCCGAACTGTGCGTCTAA 60.039 55.000 7.51 0.00 0.00 2.10
30 31 0.242825 TCCCGAACTGTGCGTCTAAG 59.757 55.000 7.51 0.00 0.00 2.18
31 32 0.736325 CCCGAACTGTGCGTCTAAGG 60.736 60.000 7.51 0.00 0.00 2.69
32 33 1.352156 CCGAACTGTGCGTCTAAGGC 61.352 60.000 7.51 0.00 0.00 4.35
33 34 0.388649 CGAACTGTGCGTCTAAGGCT 60.389 55.000 0.00 0.00 0.00 4.58
34 35 1.135489 CGAACTGTGCGTCTAAGGCTA 60.135 52.381 0.00 0.00 0.00 3.93
35 36 2.670229 CGAACTGTGCGTCTAAGGCTAA 60.670 50.000 0.00 0.00 0.00 3.09
36 37 3.522553 GAACTGTGCGTCTAAGGCTAAT 58.477 45.455 0.00 0.00 0.00 1.73
37 38 2.893637 ACTGTGCGTCTAAGGCTAATG 58.106 47.619 0.00 0.00 0.00 1.90
38 39 2.205074 CTGTGCGTCTAAGGCTAATGG 58.795 52.381 0.00 0.00 0.00 3.16
39 40 1.553248 TGTGCGTCTAAGGCTAATGGT 59.447 47.619 0.00 0.00 0.00 3.55
40 41 2.761767 TGTGCGTCTAAGGCTAATGGTA 59.238 45.455 0.00 0.00 0.00 3.25
41 42 3.196039 TGTGCGTCTAAGGCTAATGGTAA 59.804 43.478 0.00 0.00 0.00 2.85
42 43 3.554731 GTGCGTCTAAGGCTAATGGTAAC 59.445 47.826 0.00 0.00 0.00 2.50
53 54 3.006728 TGGTAACAGGAGGCGGGG 61.007 66.667 0.00 0.00 46.17 5.73
54 55 3.793888 GGTAACAGGAGGCGGGGG 61.794 72.222 0.00 0.00 0.00 5.40
55 56 2.686106 GTAACAGGAGGCGGGGGA 60.686 66.667 0.00 0.00 0.00 4.81
56 57 2.686106 TAACAGGAGGCGGGGGAC 60.686 66.667 0.00 0.00 0.00 4.46
57 58 3.549433 TAACAGGAGGCGGGGGACA 62.549 63.158 0.00 0.00 0.00 4.02
58 59 2.833151 TAACAGGAGGCGGGGGACAT 62.833 60.000 0.00 0.00 0.00 3.06
59 60 2.445845 CAGGAGGCGGGGGACATA 60.446 66.667 0.00 0.00 0.00 2.29
60 61 2.070039 CAGGAGGCGGGGGACATAA 61.070 63.158 0.00 0.00 0.00 1.90
61 62 1.073706 AGGAGGCGGGGGACATAAT 60.074 57.895 0.00 0.00 0.00 1.28
62 63 1.073199 GGAGGCGGGGGACATAATG 59.927 63.158 0.00 0.00 0.00 1.90
63 64 1.705997 GGAGGCGGGGGACATAATGT 61.706 60.000 0.00 0.00 0.00 2.71
64 65 0.182775 GAGGCGGGGGACATAATGTT 59.817 55.000 0.00 0.00 0.00 2.71
65 66 0.629058 AGGCGGGGGACATAATGTTT 59.371 50.000 0.00 0.00 0.00 2.83
66 67 1.847737 AGGCGGGGGACATAATGTTTA 59.152 47.619 0.00 0.00 0.00 2.01
67 68 1.951602 GGCGGGGGACATAATGTTTAC 59.048 52.381 0.00 0.00 0.00 2.01
68 69 1.951602 GCGGGGGACATAATGTTTACC 59.048 52.381 0.00 0.00 0.00 2.85
69 70 2.578786 CGGGGGACATAATGTTTACCC 58.421 52.381 0.00 0.00 37.95 3.69
70 71 2.092321 CGGGGGACATAATGTTTACCCA 60.092 50.000 0.00 0.00 39.39 4.51
71 72 3.562182 GGGGGACATAATGTTTACCCAG 58.438 50.000 0.00 0.00 39.39 4.45
72 73 3.562182 GGGGACATAATGTTTACCCAGG 58.438 50.000 0.00 0.00 38.30 4.45
73 74 3.053170 GGGGACATAATGTTTACCCAGGT 60.053 47.826 0.00 0.00 38.30 4.00
74 75 4.571148 GGGGACATAATGTTTACCCAGGTT 60.571 45.833 0.00 0.00 38.30 3.50
75 76 4.643334 GGGACATAATGTTTACCCAGGTTC 59.357 45.833 0.00 0.00 33.45 3.62
76 77 4.334481 GGACATAATGTTTACCCAGGTTCG 59.666 45.833 0.00 0.00 0.00 3.95
77 78 4.266714 ACATAATGTTTACCCAGGTTCGG 58.733 43.478 0.00 0.00 0.00 4.30
85 86 3.787001 CCAGGTTCGGGCCCTCTC 61.787 72.222 22.43 9.34 0.00 3.20
86 87 2.685380 CAGGTTCGGGCCCTCTCT 60.685 66.667 22.43 9.12 0.00 3.10
87 88 1.381327 CAGGTTCGGGCCCTCTCTA 60.381 63.158 22.43 0.00 0.00 2.43
88 89 0.760945 CAGGTTCGGGCCCTCTCTAT 60.761 60.000 22.43 0.00 0.00 1.98
89 90 0.760945 AGGTTCGGGCCCTCTCTATG 60.761 60.000 22.43 1.43 0.00 2.23
90 91 1.749033 GTTCGGGCCCTCTCTATGG 59.251 63.158 22.43 0.54 0.00 2.74
91 92 0.759436 GTTCGGGCCCTCTCTATGGA 60.759 60.000 22.43 3.53 0.00 3.41
92 93 0.470080 TTCGGGCCCTCTCTATGGAG 60.470 60.000 22.43 0.00 40.73 3.86
102 103 5.278127 CCTCTCTATGGAGGTAATACCCT 57.722 47.826 5.71 0.00 45.65 4.34
103 104 6.404426 CCTCTCTATGGAGGTAATACCCTA 57.596 45.833 5.71 0.00 45.65 3.53
104 105 6.189133 CCTCTCTATGGAGGTAATACCCTAC 58.811 48.000 5.71 0.00 45.65 3.18
105 106 6.011451 CCTCTCTATGGAGGTAATACCCTACT 60.011 46.154 5.71 0.00 45.65 2.57
106 107 7.417811 TCTCTATGGAGGTAATACCCTACTT 57.582 40.000 5.71 0.00 39.75 2.24
107 108 7.468496 TCTCTATGGAGGTAATACCCTACTTC 58.532 42.308 5.71 0.00 39.75 3.01
108 109 6.559429 TCTATGGAGGTAATACCCTACTTCC 58.441 44.000 5.71 6.77 44.47 3.46
109 110 4.913154 TGGAGGTAATACCCTACTTCCT 57.087 45.455 13.63 0.00 44.50 3.36
110 111 4.553678 TGGAGGTAATACCCTACTTCCTG 58.446 47.826 13.63 0.00 44.50 3.86
111 112 3.324268 GGAGGTAATACCCTACTTCCTGC 59.676 52.174 5.71 0.00 42.18 4.85
112 113 4.224762 GAGGTAATACCCTACTTCCTGCT 58.775 47.826 5.71 0.00 39.75 4.24
113 114 4.632292 AGGTAATACCCTACTTCCTGCTT 58.368 43.478 5.71 0.00 39.75 3.91
114 115 4.409247 AGGTAATACCCTACTTCCTGCTTG 59.591 45.833 5.71 0.00 39.75 4.01
115 116 4.407945 GGTAATACCCTACTTCCTGCTTGA 59.592 45.833 0.00 0.00 30.04 3.02
116 117 5.071923 GGTAATACCCTACTTCCTGCTTGAT 59.928 44.000 0.00 0.00 30.04 2.57
117 118 5.717119 AATACCCTACTTCCTGCTTGATT 57.283 39.130 0.00 0.00 0.00 2.57
118 119 3.356529 ACCCTACTTCCTGCTTGATTG 57.643 47.619 0.00 0.00 0.00 2.67
119 120 2.912956 ACCCTACTTCCTGCTTGATTGA 59.087 45.455 0.00 0.00 0.00 2.57
120 121 3.525199 ACCCTACTTCCTGCTTGATTGAT 59.475 43.478 0.00 0.00 0.00 2.57
121 122 4.133078 CCCTACTTCCTGCTTGATTGATC 58.867 47.826 0.00 0.00 0.00 2.92
122 123 4.141528 CCCTACTTCCTGCTTGATTGATCT 60.142 45.833 0.00 0.00 0.00 2.75
123 124 5.435291 CCTACTTCCTGCTTGATTGATCTT 58.565 41.667 0.00 0.00 0.00 2.40
124 125 5.296283 CCTACTTCCTGCTTGATTGATCTTG 59.704 44.000 0.00 0.00 0.00 3.02
125 126 4.914983 ACTTCCTGCTTGATTGATCTTGA 58.085 39.130 0.00 0.00 0.00 3.02
126 127 5.507637 ACTTCCTGCTTGATTGATCTTGAT 58.492 37.500 0.00 0.00 0.00 2.57
127 128 5.357314 ACTTCCTGCTTGATTGATCTTGATG 59.643 40.000 0.00 0.00 0.00 3.07
128 129 5.106876 TCCTGCTTGATTGATCTTGATGA 57.893 39.130 0.00 0.00 0.00 2.92
129 130 5.691896 TCCTGCTTGATTGATCTTGATGAT 58.308 37.500 0.00 0.00 38.27 2.45
130 131 6.834107 TCCTGCTTGATTGATCTTGATGATA 58.166 36.000 0.00 0.00 35.14 2.15
131 132 7.459234 TCCTGCTTGATTGATCTTGATGATAT 58.541 34.615 0.00 0.00 35.14 1.63
132 133 7.390718 TCCTGCTTGATTGATCTTGATGATATG 59.609 37.037 0.00 0.00 35.14 1.78
133 134 7.390718 CCTGCTTGATTGATCTTGATGATATGA 59.609 37.037 0.00 0.00 35.14 2.15
134 135 8.324163 TGCTTGATTGATCTTGATGATATGAG 57.676 34.615 0.00 0.00 35.14 2.90
135 136 7.937394 TGCTTGATTGATCTTGATGATATGAGT 59.063 33.333 0.00 0.00 35.14 3.41
136 137 9.433153 GCTTGATTGATCTTGATGATATGAGTA 57.567 33.333 0.00 0.00 35.14 2.59
156 157 8.589701 TGAGTATTACAAGAGTTGATCTACCA 57.410 34.615 3.54 0.00 37.23 3.25
157 158 8.467598 TGAGTATTACAAGAGTTGATCTACCAC 58.532 37.037 3.54 0.00 37.23 4.16
158 159 7.481642 AGTATTACAAGAGTTGATCTACCACG 58.518 38.462 3.54 0.00 37.23 4.94
159 160 5.970317 TTACAAGAGTTGATCTACCACGA 57.030 39.130 3.54 0.00 37.23 4.35
160 161 4.442375 ACAAGAGTTGATCTACCACGAG 57.558 45.455 3.54 1.07 37.23 4.18
161 162 4.079970 ACAAGAGTTGATCTACCACGAGA 58.920 43.478 3.54 0.00 37.23 4.04
162 163 4.707448 ACAAGAGTTGATCTACCACGAGAT 59.293 41.667 3.54 0.00 37.23 2.75
177 178 3.270962 CGAGATCGTAGAGGCTAAACC 57.729 52.381 0.00 0.00 43.63 3.27
178 179 2.030981 CGAGATCGTAGAGGCTAAACCC 60.031 54.545 0.00 0.00 43.63 4.11
179 180 3.224269 GAGATCGTAGAGGCTAAACCCT 58.776 50.000 0.00 0.00 43.63 4.34
180 181 4.396522 GAGATCGTAGAGGCTAAACCCTA 58.603 47.826 0.00 0.00 43.63 3.53
181 182 4.400120 AGATCGTAGAGGCTAAACCCTAG 58.600 47.826 0.00 0.00 43.63 3.02
182 183 3.939740 TCGTAGAGGCTAAACCCTAGA 57.060 47.619 0.00 0.00 40.58 2.43
183 184 4.240881 TCGTAGAGGCTAAACCCTAGAA 57.759 45.455 0.00 0.00 40.58 2.10
184 185 4.205587 TCGTAGAGGCTAAACCCTAGAAG 58.794 47.826 0.00 0.00 40.58 2.85
185 186 3.243468 CGTAGAGGCTAAACCCTAGAAGC 60.243 52.174 0.00 0.00 40.58 3.86
186 187 3.123392 AGAGGCTAAACCCTAGAAGCT 57.877 47.619 0.00 0.00 40.58 3.74
187 188 4.267341 AGAGGCTAAACCCTAGAAGCTA 57.733 45.455 0.00 0.00 40.58 3.32
188 189 4.219919 AGAGGCTAAACCCTAGAAGCTAG 58.780 47.826 0.00 0.00 40.58 3.42
189 190 2.701423 AGGCTAAACCCTAGAAGCTAGC 59.299 50.000 6.62 6.62 40.58 3.42
190 191 2.224329 GGCTAAACCCTAGAAGCTAGCC 60.224 54.545 12.13 13.65 43.27 3.93
191 192 2.701423 GCTAAACCCTAGAAGCTAGCCT 59.299 50.000 12.13 4.79 32.18 4.58
192 193 3.896272 GCTAAACCCTAGAAGCTAGCCTA 59.104 47.826 12.13 5.82 32.18 3.93
193 194 4.528987 GCTAAACCCTAGAAGCTAGCCTAT 59.471 45.833 12.13 0.00 32.18 2.57
194 195 4.965200 AAACCCTAGAAGCTAGCCTATG 57.035 45.455 12.13 3.90 0.00 2.23
195 196 3.905493 ACCCTAGAAGCTAGCCTATGA 57.095 47.619 12.13 0.00 0.00 2.15
196 197 4.412060 ACCCTAGAAGCTAGCCTATGAT 57.588 45.455 12.13 0.00 0.00 2.45
197 198 4.757692 ACCCTAGAAGCTAGCCTATGATT 58.242 43.478 12.13 0.00 0.00 2.57
198 199 5.905088 ACCCTAGAAGCTAGCCTATGATTA 58.095 41.667 12.13 0.00 0.00 1.75
199 200 6.507568 ACCCTAGAAGCTAGCCTATGATTAT 58.492 40.000 12.13 0.00 0.00 1.28
200 201 6.382570 ACCCTAGAAGCTAGCCTATGATTATG 59.617 42.308 12.13 0.00 0.00 1.90
201 202 6.609212 CCCTAGAAGCTAGCCTATGATTATGA 59.391 42.308 12.13 0.00 0.00 2.15
202 203 7.289782 CCCTAGAAGCTAGCCTATGATTATGAT 59.710 40.741 12.13 0.00 0.00 2.45
203 204 8.703743 CCTAGAAGCTAGCCTATGATTATGATT 58.296 37.037 12.13 0.00 0.00 2.57
223 224 7.770801 TGATTATGATTGTTCTTGTCCTACG 57.229 36.000 0.00 0.00 0.00 3.51
224 225 6.761242 TGATTATGATTGTTCTTGTCCTACGG 59.239 38.462 0.00 0.00 0.00 4.02
225 226 4.819105 ATGATTGTTCTTGTCCTACGGA 57.181 40.909 0.00 0.00 0.00 4.69
241 242 2.685850 CGGACTAAATCCTCCGGTTT 57.314 50.000 0.00 0.00 46.69 3.27
242 243 3.806625 CGGACTAAATCCTCCGGTTTA 57.193 47.619 0.00 0.00 46.69 2.01
243 244 4.332428 CGGACTAAATCCTCCGGTTTAT 57.668 45.455 0.00 0.00 46.69 1.40
244 245 5.458041 CGGACTAAATCCTCCGGTTTATA 57.542 43.478 0.00 0.00 46.69 0.98
245 246 6.034161 CGGACTAAATCCTCCGGTTTATAT 57.966 41.667 0.00 0.00 46.69 0.86
246 247 7.161773 CGGACTAAATCCTCCGGTTTATATA 57.838 40.000 0.00 0.00 46.69 0.86
247 248 7.256286 CGGACTAAATCCTCCGGTTTATATAG 58.744 42.308 0.00 2.04 46.69 1.31
248 249 7.121759 CGGACTAAATCCTCCGGTTTATATAGA 59.878 40.741 0.00 0.00 46.69 1.98
249 250 8.249638 GGACTAAATCCTCCGGTTTATATAGAC 58.750 40.741 0.00 0.00 45.22 2.59
250 251 8.716674 ACTAAATCCTCCGGTTTATATAGACA 57.283 34.615 0.00 0.00 0.00 3.41
251 252 8.583296 ACTAAATCCTCCGGTTTATATAGACAC 58.417 37.037 0.00 0.00 0.00 3.67
252 253 5.997384 ATCCTCCGGTTTATATAGACACC 57.003 43.478 0.00 2.59 0.00 4.16
269 270 2.284493 CGGAGGGGGCTAGGGTTA 59.716 66.667 0.00 0.00 0.00 2.85
270 271 2.138831 CGGAGGGGGCTAGGGTTAC 61.139 68.421 0.00 0.00 0.00 2.50
271 272 1.003835 GGAGGGGGCTAGGGTTACA 59.996 63.158 0.00 0.00 0.00 2.41
272 273 1.343431 GGAGGGGGCTAGGGTTACAC 61.343 65.000 0.00 0.00 0.00 2.90
273 274 0.619543 GAGGGGGCTAGGGTTACACA 60.620 60.000 0.00 0.00 0.00 3.72
274 275 0.620700 AGGGGGCTAGGGTTACACAG 60.621 60.000 0.00 0.00 0.00 3.66
275 276 0.619543 GGGGGCTAGGGTTACACAGA 60.620 60.000 0.00 0.00 0.00 3.41
276 277 0.831307 GGGGCTAGGGTTACACAGAG 59.169 60.000 0.00 0.00 0.00 3.35
277 278 1.569653 GGGCTAGGGTTACACAGAGT 58.430 55.000 0.00 0.00 0.00 3.24
278 279 1.481363 GGGCTAGGGTTACACAGAGTC 59.519 57.143 0.00 0.00 0.00 3.36
279 280 1.134560 GGCTAGGGTTACACAGAGTCG 59.865 57.143 0.00 0.00 0.00 4.18
280 281 1.134560 GCTAGGGTTACACAGAGTCGG 59.865 57.143 0.00 0.00 0.00 4.79
281 282 2.444421 CTAGGGTTACACAGAGTCGGT 58.556 52.381 0.00 0.00 0.00 4.69
282 283 1.713297 AGGGTTACACAGAGTCGGTT 58.287 50.000 0.00 0.00 0.00 4.44
283 284 2.880443 AGGGTTACACAGAGTCGGTTA 58.120 47.619 0.00 0.00 0.00 2.85
284 285 3.438183 AGGGTTACACAGAGTCGGTTAT 58.562 45.455 0.00 0.00 0.00 1.89
285 286 4.603131 AGGGTTACACAGAGTCGGTTATA 58.397 43.478 0.00 0.00 0.00 0.98
286 287 4.643784 AGGGTTACACAGAGTCGGTTATAG 59.356 45.833 0.00 0.00 0.00 1.31
287 288 4.641989 GGGTTACACAGAGTCGGTTATAGA 59.358 45.833 0.00 0.00 0.00 1.98
288 289 5.221009 GGGTTACACAGAGTCGGTTATAGAG 60.221 48.000 0.00 0.00 0.00 2.43
289 290 5.587844 GGTTACACAGAGTCGGTTATAGAGA 59.412 44.000 0.00 0.00 0.00 3.10
290 291 6.094603 GGTTACACAGAGTCGGTTATAGAGAA 59.905 42.308 0.00 0.00 0.00 2.87
291 292 7.362401 GGTTACACAGAGTCGGTTATAGAGAAA 60.362 40.741 0.00 0.00 0.00 2.52
292 293 6.585695 ACACAGAGTCGGTTATAGAGAAAA 57.414 37.500 0.00 0.00 0.00 2.29
293 294 6.622549 ACACAGAGTCGGTTATAGAGAAAAG 58.377 40.000 0.00 0.00 0.00 2.27
294 295 6.037098 CACAGAGTCGGTTATAGAGAAAAGG 58.963 44.000 0.00 0.00 0.00 3.11
295 296 5.950549 ACAGAGTCGGTTATAGAGAAAAGGA 59.049 40.000 0.00 0.00 0.00 3.36
296 297 6.436532 ACAGAGTCGGTTATAGAGAAAAGGAA 59.563 38.462 0.00 0.00 0.00 3.36
297 298 7.124448 ACAGAGTCGGTTATAGAGAAAAGGAAT 59.876 37.037 0.00 0.00 0.00 3.01
298 299 7.650104 CAGAGTCGGTTATAGAGAAAAGGAATC 59.350 40.741 0.00 0.00 0.00 2.52
299 300 7.562088 AGAGTCGGTTATAGAGAAAAGGAATCT 59.438 37.037 0.00 0.00 0.00 2.40
300 301 8.763984 AGTCGGTTATAGAGAAAAGGAATCTA 57.236 34.615 0.00 0.00 0.00 1.98
301 302 8.631797 AGTCGGTTATAGAGAAAAGGAATCTAC 58.368 37.037 0.00 0.00 0.00 2.59
302 303 8.411683 GTCGGTTATAGAGAAAAGGAATCTACA 58.588 37.037 0.00 0.00 0.00 2.74
303 304 9.144298 TCGGTTATAGAGAAAAGGAATCTACAT 57.856 33.333 0.00 0.00 0.00 2.29
309 310 7.841282 AGAGAAAAGGAATCTACATATCCGA 57.159 36.000 0.00 0.00 38.31 4.55
310 311 8.251383 AGAGAAAAGGAATCTACATATCCGAA 57.749 34.615 0.00 0.00 38.31 4.30
311 312 8.875168 AGAGAAAAGGAATCTACATATCCGAAT 58.125 33.333 0.00 0.00 38.31 3.34
312 313 9.495572 GAGAAAAGGAATCTACATATCCGAATT 57.504 33.333 0.00 0.00 38.31 2.17
313 314 9.277783 AGAAAAGGAATCTACATATCCGAATTG 57.722 33.333 0.00 0.00 38.31 2.32
314 315 8.980481 AAAAGGAATCTACATATCCGAATTGT 57.020 30.769 0.00 0.00 38.31 2.71
315 316 8.608844 AAAGGAATCTACATATCCGAATTGTC 57.391 34.615 0.00 0.00 38.31 3.18
316 317 7.303182 AGGAATCTACATATCCGAATTGTCA 57.697 36.000 0.00 0.00 38.31 3.58
317 318 7.735917 AGGAATCTACATATCCGAATTGTCAA 58.264 34.615 0.00 0.00 38.31 3.18
318 319 7.875041 AGGAATCTACATATCCGAATTGTCAAG 59.125 37.037 0.00 0.00 38.31 3.02
319 320 7.360438 GGAATCTACATATCCGAATTGTCAAGC 60.360 40.741 0.00 0.00 0.00 4.01
320 321 6.161855 TCTACATATCCGAATTGTCAAGCT 57.838 37.500 0.00 0.00 0.00 3.74
321 322 6.582636 TCTACATATCCGAATTGTCAAGCTT 58.417 36.000 0.00 0.00 0.00 3.74
322 323 5.490139 ACATATCCGAATTGTCAAGCTTG 57.510 39.130 20.81 20.81 0.00 4.01
323 324 2.927553 ATCCGAATTGTCAAGCTTGC 57.072 45.000 21.99 16.43 0.00 4.01
324 325 0.881118 TCCGAATTGTCAAGCTTGCC 59.119 50.000 21.99 11.57 0.00 4.52
325 326 0.883833 CCGAATTGTCAAGCTTGCCT 59.116 50.000 21.99 3.57 0.00 4.75
326 327 1.270550 CCGAATTGTCAAGCTTGCCTT 59.729 47.619 21.99 11.28 0.00 4.35
327 328 2.589014 CGAATTGTCAAGCTTGCCTTC 58.411 47.619 21.99 17.41 0.00 3.46
328 329 2.669391 CGAATTGTCAAGCTTGCCTTCC 60.669 50.000 21.99 7.84 0.00 3.46
329 330 1.999648 ATTGTCAAGCTTGCCTTCCA 58.000 45.000 21.99 9.58 0.00 3.53
330 331 1.032014 TTGTCAAGCTTGCCTTCCAC 58.968 50.000 21.99 13.52 0.00 4.02
331 332 1.165907 TGTCAAGCTTGCCTTCCACG 61.166 55.000 21.99 0.00 0.00 4.94
332 333 2.256461 CAAGCTTGCCTTCCACGC 59.744 61.111 14.65 0.00 38.87 5.34
333 334 2.203337 AAGCTTGCCTTCCACGCA 60.203 55.556 0.00 0.00 40.87 5.24
334 335 1.827789 AAGCTTGCCTTCCACGCAA 60.828 52.632 0.00 0.00 43.71 4.85
335 336 1.391157 AAGCTTGCCTTCCACGCAAA 61.391 50.000 0.00 0.00 45.11 3.68
336 337 1.372128 GCTTGCCTTCCACGCAAAG 60.372 57.895 0.00 0.00 45.11 2.77
337 338 1.286880 CTTGCCTTCCACGCAAAGG 59.713 57.895 6.69 6.69 45.11 3.11
338 339 1.152860 TTGCCTTCCACGCAAAGGA 60.153 52.632 13.57 0.00 45.15 3.36
339 340 1.172180 TTGCCTTCCACGCAAAGGAG 61.172 55.000 13.57 0.00 45.15 3.69
340 341 1.302511 GCCTTCCACGCAAAGGAGA 60.303 57.895 13.57 0.00 45.15 3.71
341 342 1.301677 GCCTTCCACGCAAAGGAGAG 61.302 60.000 13.57 3.40 45.15 3.20
342 343 0.035458 CCTTCCACGCAAAGGAGAGT 59.965 55.000 5.37 0.00 45.15 3.24
343 344 1.433534 CTTCCACGCAAAGGAGAGTC 58.566 55.000 0.00 0.00 36.33 3.36
344 345 0.034896 TTCCACGCAAAGGAGAGTCC 59.965 55.000 0.00 0.00 36.33 3.85
345 346 1.376037 CCACGCAAAGGAGAGTCCC 60.376 63.158 0.00 0.00 37.19 4.46
346 347 1.371183 CACGCAAAGGAGAGTCCCA 59.629 57.895 1.17 0.00 37.19 4.37
347 348 0.951040 CACGCAAAGGAGAGTCCCAC 60.951 60.000 1.17 0.00 37.19 4.61
348 349 1.376037 CGCAAAGGAGAGTCCCACC 60.376 63.158 1.17 0.00 37.19 4.61
349 350 1.002011 GCAAAGGAGAGTCCCACCC 60.002 63.158 1.17 0.00 37.19 4.61
350 351 1.296715 CAAAGGAGAGTCCCACCCG 59.703 63.158 1.17 0.00 37.19 5.28
351 352 1.157751 AAAGGAGAGTCCCACCCGA 59.842 57.895 1.17 0.00 37.19 5.14
352 353 0.473117 AAAGGAGAGTCCCACCCGAA 60.473 55.000 1.17 0.00 37.19 4.30
353 354 1.192803 AAGGAGAGTCCCACCCGAAC 61.193 60.000 1.17 0.00 37.19 3.95
354 355 1.911766 GGAGAGTCCCACCCGAACA 60.912 63.158 0.00 0.00 0.00 3.18
355 356 1.292541 GAGAGTCCCACCCGAACAC 59.707 63.158 0.00 0.00 0.00 3.32
356 357 2.048503 GAGTCCCACCCGAACACG 60.049 66.667 0.00 0.00 0.00 4.49
357 358 2.522436 AGTCCCACCCGAACACGA 60.522 61.111 0.00 0.00 0.00 4.35
358 359 2.048503 GTCCCACCCGAACACGAG 60.049 66.667 0.00 0.00 0.00 4.18
359 360 2.203523 TCCCACCCGAACACGAGA 60.204 61.111 0.00 0.00 0.00 4.04
360 361 2.048503 CCCACCCGAACACGAGAC 60.049 66.667 0.00 0.00 0.00 3.36
361 362 2.430244 CCACCCGAACACGAGACG 60.430 66.667 0.00 0.00 0.00 4.18
362 363 2.640989 CACCCGAACACGAGACGA 59.359 61.111 0.00 0.00 0.00 4.20
363 364 1.008194 CACCCGAACACGAGACGAA 60.008 57.895 0.00 0.00 0.00 3.85
364 365 1.002250 CACCCGAACACGAGACGAAG 61.002 60.000 0.00 0.00 0.00 3.79
397 398 8.651589 TCTTATATCTTCATAGTCCATTCGGT 57.348 34.615 0.00 0.00 0.00 4.69
398 399 8.740906 TCTTATATCTTCATAGTCCATTCGGTC 58.259 37.037 0.00 0.00 0.00 4.79
399 400 4.608948 ATCTTCATAGTCCATTCGGTCC 57.391 45.455 0.00 0.00 0.00 4.46
400 401 2.361119 TCTTCATAGTCCATTCGGTCCG 59.639 50.000 4.39 4.39 0.00 4.79
401 402 1.037493 TCATAGTCCATTCGGTCCGG 58.963 55.000 12.29 0.00 0.00 5.14
402 403 0.600255 CATAGTCCATTCGGTCCGGC 60.600 60.000 12.29 0.00 0.00 6.13
403 404 1.046472 ATAGTCCATTCGGTCCGGCA 61.046 55.000 12.29 0.00 0.00 5.69
404 405 1.046472 TAGTCCATTCGGTCCGGCAT 61.046 55.000 12.29 0.89 0.00 4.40
405 406 1.046472 AGTCCATTCGGTCCGGCATA 61.046 55.000 12.29 0.00 0.00 3.14
406 407 0.179067 GTCCATTCGGTCCGGCATAA 60.179 55.000 12.29 0.00 0.00 1.90
407 408 0.105964 TCCATTCGGTCCGGCATAAG 59.894 55.000 12.29 0.09 0.00 1.73
408 409 1.507141 CCATTCGGTCCGGCATAAGC 61.507 60.000 12.29 0.00 41.10 3.09
409 410 0.813610 CATTCGGTCCGGCATAAGCA 60.814 55.000 12.29 0.00 44.61 3.91
410 411 0.108585 ATTCGGTCCGGCATAAGCAT 59.891 50.000 12.29 0.00 44.61 3.79
411 412 0.753867 TTCGGTCCGGCATAAGCATA 59.246 50.000 12.29 0.00 44.61 3.14
412 413 0.973632 TCGGTCCGGCATAAGCATAT 59.026 50.000 12.29 0.00 44.61 1.78
413 414 2.172679 TCGGTCCGGCATAAGCATATA 58.827 47.619 12.29 0.00 44.61 0.86
414 415 2.165641 TCGGTCCGGCATAAGCATATAG 59.834 50.000 12.29 0.00 44.61 1.31
415 416 2.094182 CGGTCCGGCATAAGCATATAGT 60.094 50.000 2.34 0.00 44.61 2.12
416 417 3.522553 GGTCCGGCATAAGCATATAGTC 58.477 50.000 0.00 0.00 44.61 2.59
417 418 3.522553 GTCCGGCATAAGCATATAGTCC 58.477 50.000 0.00 0.00 44.61 3.85
418 419 2.165641 TCCGGCATAAGCATATAGTCCG 59.834 50.000 0.00 8.56 44.61 4.79
419 420 2.540515 CGGCATAAGCATATAGTCCGG 58.459 52.381 0.00 0.00 44.61 5.14
420 421 2.280628 GGCATAAGCATATAGTCCGGC 58.719 52.381 0.00 0.00 44.61 6.13
421 422 2.093447 GGCATAAGCATATAGTCCGGCT 60.093 50.000 0.00 0.00 44.61 5.52
422 423 2.932614 GCATAAGCATATAGTCCGGCTG 59.067 50.000 0.00 0.00 41.58 4.85
423 424 3.617531 GCATAAGCATATAGTCCGGCTGT 60.618 47.826 0.00 0.00 41.58 4.40
424 425 2.821991 AAGCATATAGTCCGGCTGTC 57.178 50.000 0.00 0.00 36.58 3.51
425 426 0.969894 AGCATATAGTCCGGCTGTCC 59.030 55.000 0.00 0.00 34.83 4.02
437 438 2.687902 CTGTCCGAGGACCCCCTA 59.312 66.667 18.57 0.00 44.53 3.53
438 439 1.001248 CTGTCCGAGGACCCCCTAA 59.999 63.158 18.57 0.00 44.53 2.69
439 440 0.398664 CTGTCCGAGGACCCCCTAAT 60.399 60.000 18.57 0.00 44.53 1.73
440 441 0.398098 TGTCCGAGGACCCCCTAATC 60.398 60.000 18.57 0.00 44.53 1.75
441 442 1.120184 GTCCGAGGACCCCCTAATCC 61.120 65.000 11.07 0.00 44.53 3.01
442 443 1.074775 CCGAGGACCCCCTAATCCA 60.075 63.158 0.00 0.00 44.53 3.41
443 444 1.122019 CCGAGGACCCCCTAATCCAG 61.122 65.000 0.00 0.00 44.53 3.86
444 445 1.122019 CGAGGACCCCCTAATCCAGG 61.122 65.000 0.00 0.00 44.53 4.45
455 456 2.043227 CTAATCCAGGACTCCCTCACC 58.957 57.143 0.00 0.00 42.02 4.02
456 457 0.621862 AATCCAGGACTCCCTCACCC 60.622 60.000 0.00 0.00 42.02 4.61
457 458 2.880629 ATCCAGGACTCCCTCACCCG 62.881 65.000 0.00 0.00 42.02 5.28
458 459 3.077556 CAGGACTCCCTCACCCGG 61.078 72.222 0.00 0.00 42.02 5.73
463 464 4.087892 CTCCCTCACCCGGTGCTG 62.088 72.222 13.19 7.92 32.98 4.41
500 502 4.875536 CGGATGTCATGTTGGTTCAGATTA 59.124 41.667 0.00 0.00 0.00 1.75
513 519 5.119694 GGTTCAGATTACCTCTTAAGCCAG 58.880 45.833 0.00 0.00 32.06 4.85
523 529 1.989586 TCTTAAGCCAGGGGTTTAGCA 59.010 47.619 8.20 0.00 37.08 3.49
524 530 2.377193 TCTTAAGCCAGGGGTTTAGCAA 59.623 45.455 8.20 0.00 37.08 3.91
545 551 5.458779 GCAATGTTGTTTACTTGTTCAGGTC 59.541 40.000 0.00 0.00 0.00 3.85
571 577 1.193323 CCCATGTCTCTCTGCTCTGT 58.807 55.000 0.00 0.00 0.00 3.41
584 590 0.164647 GCTCTGTGCATCGTGTTCAC 59.835 55.000 0.00 0.00 42.31 3.18
586 592 1.154599 CTGTGCATCGTGTTCACGC 60.155 57.895 18.63 7.29 33.69 5.34
590 596 0.390472 TGCATCGTGTTCACGCCATA 60.390 50.000 18.63 4.00 0.00 2.74
598 604 3.608241 CGTGTTCACGCCATATTGTGTTT 60.608 43.478 12.19 0.00 37.38 2.83
639 646 5.174035 CCTCGTACTCATTCTATTTCTTGCG 59.826 44.000 0.00 0.00 0.00 4.85
681 688 5.953183 AGCATTGCGTATTCATGAAGAAAA 58.047 33.333 14.54 5.56 40.22 2.29
682 689 6.389091 AGCATTGCGTATTCATGAAGAAAAA 58.611 32.000 14.54 5.22 40.22 1.94
714 722 0.252479 TCGTCGAAGCCTCTCCTAGT 59.748 55.000 0.00 0.00 0.00 2.57
721 729 0.908198 AGCCTCTCCTAGTGCCTTTG 59.092 55.000 0.00 0.00 0.00 2.77
735 825 5.876357 AGTGCCTTTGTATTTAGGAACAGA 58.124 37.500 0.00 0.00 41.83 3.41
736 826 5.940470 AGTGCCTTTGTATTTAGGAACAGAG 59.060 40.000 0.00 0.00 41.83 3.35
737 827 5.123979 GTGCCTTTGTATTTAGGAACAGAGG 59.876 44.000 7.48 7.48 45.98 3.69
738 828 4.640647 GCCTTTGTATTTAGGAACAGAGGG 59.359 45.833 12.35 1.75 44.31 4.30
739 829 5.806734 GCCTTTGTATTTAGGAACAGAGGGT 60.807 44.000 12.35 0.00 44.31 4.34
821 1969 8.017946 ACTAAAATTTCAAGCGACTGAGATTTC 58.982 33.333 12.84 0.00 38.50 2.17
906 2294 5.481105 TCATGCCAATTGATTGTTTCTTCC 58.519 37.500 7.12 0.00 36.06 3.46
995 2383 2.037367 ACCGGCAGGAGTAGAGCA 59.963 61.111 10.86 0.00 41.02 4.26
996 2384 1.605058 GACCGGCAGGAGTAGAGCAA 61.605 60.000 10.86 0.00 41.02 3.91
997 2385 1.142748 CCGGCAGGAGTAGAGCAAG 59.857 63.158 0.00 0.00 41.02 4.01
998 2386 1.520342 CGGCAGGAGTAGAGCAAGC 60.520 63.158 0.00 0.00 0.00 4.01
1305 2693 0.107459 GCCCACATTCCCTCTCAGAC 60.107 60.000 0.00 0.00 0.00 3.51
1362 2760 5.762179 TCCTGACCTCAAACATGTATCTT 57.238 39.130 0.00 0.00 0.00 2.40
1395 2793 6.872628 ACATCAAATATCTGACATTGCGAT 57.127 33.333 0.00 0.00 0.00 4.58
1396 2794 6.665465 ACATCAAATATCTGACATTGCGATG 58.335 36.000 12.66 12.66 39.25 3.84
1397 2795 5.678132 TCAAATATCTGACATTGCGATGG 57.322 39.130 18.31 0.73 37.60 3.51
1398 2796 4.023792 TCAAATATCTGACATTGCGATGGC 60.024 41.667 18.31 16.03 41.98 4.40
1400 2798 2.916702 ATCTGACATTGCGATGGCTA 57.083 45.000 20.76 9.40 42.14 3.93
1401 2799 1.939974 TCTGACATTGCGATGGCTAC 58.060 50.000 20.76 8.22 42.14 3.58
1406 2828 2.544267 GACATTGCGATGGCTACCTAAC 59.456 50.000 18.31 0.00 38.33 2.34
1435 2857 6.953520 TCAGAATAAGAATGAAATGGGTGGTT 59.046 34.615 0.00 0.00 0.00 3.67
1436 2858 8.112822 TCAGAATAAGAATGAAATGGGTGGTTA 58.887 33.333 0.00 0.00 0.00 2.85
1437 2859 8.190784 CAGAATAAGAATGAAATGGGTGGTTAC 58.809 37.037 0.00 0.00 0.00 2.50
1438 2860 8.116026 AGAATAAGAATGAAATGGGTGGTTACT 58.884 33.333 0.00 0.00 0.00 2.24
1499 2927 9.952030 TCAACAAACATATGAGTATTAACTGGA 57.048 29.630 10.38 0.00 35.56 3.86
1502 2930 9.174166 ACAAACATATGAGTATTAACTGGAACC 57.826 33.333 10.38 0.00 35.56 3.62
1503 2931 8.621286 CAAACATATGAGTATTAACTGGAACCC 58.379 37.037 10.38 0.00 35.56 4.11
1504 2932 7.691993 ACATATGAGTATTAACTGGAACCCT 57.308 36.000 10.38 0.00 35.56 4.34
1505 2933 7.509546 ACATATGAGTATTAACTGGAACCCTG 58.490 38.462 10.38 0.00 35.56 4.45
1506 2934 7.347222 ACATATGAGTATTAACTGGAACCCTGA 59.653 37.037 10.38 0.00 35.56 3.86
1507 2935 6.831664 ATGAGTATTAACTGGAACCCTGAT 57.168 37.500 0.00 0.00 35.56 2.90
1508 2936 7.931015 ATGAGTATTAACTGGAACCCTGATA 57.069 36.000 0.00 0.00 35.56 2.15
1509 2937 7.361457 TGAGTATTAACTGGAACCCTGATAG 57.639 40.000 0.00 0.00 35.56 2.08
1510 2938 6.901300 TGAGTATTAACTGGAACCCTGATAGT 59.099 38.462 0.00 0.00 35.56 2.12
1511 2939 8.063153 TGAGTATTAACTGGAACCCTGATAGTA 58.937 37.037 0.00 0.00 35.56 1.82
1512 2940 8.849543 AGTATTAACTGGAACCCTGATAGTAA 57.150 34.615 0.00 0.00 33.57 2.24
1513 2941 8.702819 AGTATTAACTGGAACCCTGATAGTAAC 58.297 37.037 0.00 0.00 33.57 2.50
1514 2942 6.938698 TTAACTGGAACCCTGATAGTAACA 57.061 37.500 0.00 0.00 0.00 2.41
1515 2943 5.422214 AACTGGAACCCTGATAGTAACAG 57.578 43.478 0.51 0.51 35.43 3.16
1516 2944 4.426704 ACTGGAACCCTGATAGTAACAGT 58.573 43.478 6.67 0.00 32.63 3.55
1517 2945 5.586877 ACTGGAACCCTGATAGTAACAGTA 58.413 41.667 6.67 0.00 34.50 2.74
1518 2946 6.203072 ACTGGAACCCTGATAGTAACAGTAT 58.797 40.000 6.67 0.00 34.50 2.12
1519 2947 6.324254 ACTGGAACCCTGATAGTAACAGTATC 59.676 42.308 6.67 2.42 34.50 2.24
1520 2948 6.199376 TGGAACCCTGATAGTAACAGTATCA 58.801 40.000 6.67 4.18 37.98 2.15
1521 2949 6.844388 TGGAACCCTGATAGTAACAGTATCAT 59.156 38.462 6.67 0.00 39.16 2.45
1522 2950 7.015292 TGGAACCCTGATAGTAACAGTATCATC 59.985 40.741 6.67 0.92 39.16 2.92
1523 2951 7.015292 GGAACCCTGATAGTAACAGTATCATCA 59.985 40.741 6.67 0.00 39.16 3.07
1524 2952 7.914427 ACCCTGATAGTAACAGTATCATCAA 57.086 36.000 6.67 0.00 39.16 2.57
1525 2953 8.319057 ACCCTGATAGTAACAGTATCATCAAA 57.681 34.615 6.67 0.00 39.16 2.69
1526 2954 8.768397 ACCCTGATAGTAACAGTATCATCAAAA 58.232 33.333 6.67 0.00 39.16 2.44
1527 2955 9.613428 CCCTGATAGTAACAGTATCATCAAAAA 57.387 33.333 6.67 0.00 39.16 1.94
1577 3005 5.113383 TGCACGACGAATTAATTATCTGGT 58.887 37.500 0.00 0.00 0.00 4.00
1578 3006 5.006261 TGCACGACGAATTAATTATCTGGTG 59.994 40.000 0.00 7.42 0.00 4.17
1629 3062 8.114331 TGCATCTTATCAGTTTCTGAATGTTT 57.886 30.769 3.58 0.00 44.04 2.83
1685 3120 7.537596 TGAAAACCTGAAACCATGATGTTAT 57.462 32.000 0.00 0.00 0.00 1.89
1687 3122 4.989279 ACCTGAAACCATGATGTTATGC 57.011 40.909 0.00 0.00 0.00 3.14
1694 3129 7.056006 TGAAACCATGATGTTATGCTGATACT 58.944 34.615 0.00 0.00 0.00 2.12
1695 3130 6.872628 AACCATGATGTTATGCTGATACTG 57.127 37.500 0.00 0.00 0.00 2.74
1705 3140 7.657336 TGTTATGCTGATACTGTGATATCGAA 58.343 34.615 0.00 0.00 34.75 3.71
1706 3141 7.595130 TGTTATGCTGATACTGTGATATCGAAC 59.405 37.037 0.00 0.00 34.75 3.95
1776 3360 1.754226 TGTCTTGTTCTTGGTTTGGGC 59.246 47.619 0.00 0.00 0.00 5.36
1785 3369 4.046286 TCTTGGTTTGGGCTATGACAAT 57.954 40.909 0.00 0.00 0.00 2.71
1791 3375 2.042686 TGGGCTATGACAATGTGCTC 57.957 50.000 0.00 0.00 0.00 4.26
1892 3476 9.507329 AGCAAATGAAACTAGAACTATTTCTGA 57.493 29.630 5.63 0.00 42.41 3.27
1934 3521 4.868268 AGGAGTACTGAAGTATGCCTACA 58.132 43.478 0.00 0.00 36.10 2.74
1944 3531 8.213679 ACTGAAGTATGCCTACATATGAATTGT 58.786 33.333 10.38 0.00 40.79 2.71
2108 3695 0.526211 AAGTGACGCAGCTGTATCGA 59.474 50.000 16.64 0.00 0.00 3.59
2234 3821 7.090808 GGGAATACAATTTCCTCTTGTTTGAC 58.909 38.462 3.46 0.00 43.94 3.18
2421 4012 5.102953 TCATAAGTTCATTGCTACAGCCT 57.897 39.130 0.00 0.00 41.18 4.58
2457 4049 3.966979 TCCATTACACAATGATGGCTGT 58.033 40.909 0.00 0.00 42.95 4.40
2539 4131 4.937620 TCAAATCTGACAGTGCATTAGGTC 59.062 41.667 1.59 0.00 0.00 3.85
2545 4137 1.343142 ACAGTGCATTAGGTCGTGTGA 59.657 47.619 0.00 0.00 0.00 3.58
2546 4138 1.726791 CAGTGCATTAGGTCGTGTGAC 59.273 52.381 0.00 0.00 44.72 3.67
2624 4216 3.040655 TGGGATGCTAAGCTAGGTACA 57.959 47.619 0.00 0.00 0.00 2.90
2791 4468 6.164408 TGTGTACTCAACATTAAAGCATCG 57.836 37.500 0.00 0.00 41.10 3.84
2855 4532 4.559862 TTTTCTCCATCCAGAGGACTTC 57.440 45.455 0.00 0.00 32.98 3.01
2856 4533 3.481559 TTCTCCATCCAGAGGACTTCT 57.518 47.619 0.00 0.00 32.98 2.85
2979 4667 2.877097 TGGAGATTTGCAGCAGGTTA 57.123 45.000 0.00 0.00 0.00 2.85
2994 4682 4.340381 AGCAGGTTATGGAATCTTGATTGC 59.660 41.667 7.73 7.73 0.00 3.56
3098 4786 6.054941 TCTCTTGTATCAGTTTTTGTGCTCA 58.945 36.000 0.00 0.00 0.00 4.26
3109 4798 7.282224 TCAGTTTTTGTGCTCAACTTAGTACAT 59.718 33.333 0.00 0.00 40.97 2.29
3112 4801 9.893305 GTTTTTGTGCTCAACTTAGTACATAAT 57.107 29.630 0.00 0.00 40.97 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.085947 GTTCGGGACCCCCTACCC 61.086 72.222 4.46 0.00 42.67 3.69
2 3 2.040114 AGTTCGGGACCCCCTACC 59.960 66.667 4.46 0.00 42.67 3.18
4 5 1.611261 CACAGTTCGGGACCCCCTA 60.611 63.158 4.46 0.00 42.67 3.53
5 6 2.928396 CACAGTTCGGGACCCCCT 60.928 66.667 4.46 0.00 42.67 4.79
6 7 4.717313 GCACAGTTCGGGACCCCC 62.717 72.222 4.46 0.00 41.09 5.40
8 9 4.309950 ACGCACAGTTCGGGACCC 62.310 66.667 0.00 0.00 0.00 4.46
9 10 1.870055 TAGACGCACAGTTCGGGACC 61.870 60.000 0.00 0.00 0.00 4.46
10 11 0.038892 TTAGACGCACAGTTCGGGAC 60.039 55.000 0.00 0.00 0.00 4.46
11 12 0.242825 CTTAGACGCACAGTTCGGGA 59.757 55.000 0.00 0.00 0.00 5.14
12 13 0.736325 CCTTAGACGCACAGTTCGGG 60.736 60.000 0.00 0.00 0.00 5.14
13 14 1.352156 GCCTTAGACGCACAGTTCGG 61.352 60.000 0.00 0.00 0.00 4.30
14 15 0.388649 AGCCTTAGACGCACAGTTCG 60.389 55.000 0.00 0.00 0.00 3.95
15 16 2.649331 TAGCCTTAGACGCACAGTTC 57.351 50.000 0.00 0.00 0.00 3.01
16 17 3.262420 CATTAGCCTTAGACGCACAGTT 58.738 45.455 0.00 0.00 0.00 3.16
17 18 2.418746 CCATTAGCCTTAGACGCACAGT 60.419 50.000 0.00 0.00 0.00 3.55
18 19 2.205074 CCATTAGCCTTAGACGCACAG 58.795 52.381 0.00 0.00 0.00 3.66
19 20 1.553248 ACCATTAGCCTTAGACGCACA 59.447 47.619 0.00 0.00 0.00 4.57
20 21 2.311124 ACCATTAGCCTTAGACGCAC 57.689 50.000 0.00 0.00 0.00 5.34
21 22 3.196039 TGTTACCATTAGCCTTAGACGCA 59.804 43.478 0.00 0.00 0.00 5.24
22 23 3.788937 TGTTACCATTAGCCTTAGACGC 58.211 45.455 0.00 0.00 0.00 5.19
23 24 4.098960 TCCTGTTACCATTAGCCTTAGACG 59.901 45.833 0.00 0.00 0.00 4.18
24 25 5.453480 CCTCCTGTTACCATTAGCCTTAGAC 60.453 48.000 0.00 0.00 0.00 2.59
25 26 4.654262 CCTCCTGTTACCATTAGCCTTAGA 59.346 45.833 0.00 0.00 0.00 2.10
26 27 4.743955 GCCTCCTGTTACCATTAGCCTTAG 60.744 50.000 0.00 0.00 0.00 2.18
27 28 3.135895 GCCTCCTGTTACCATTAGCCTTA 59.864 47.826 0.00 0.00 0.00 2.69
28 29 2.092375 GCCTCCTGTTACCATTAGCCTT 60.092 50.000 0.00 0.00 0.00 4.35
29 30 1.490910 GCCTCCTGTTACCATTAGCCT 59.509 52.381 0.00 0.00 0.00 4.58
30 31 1.810412 CGCCTCCTGTTACCATTAGCC 60.810 57.143 0.00 0.00 0.00 3.93
31 32 1.583054 CGCCTCCTGTTACCATTAGC 58.417 55.000 0.00 0.00 0.00 3.09
32 33 1.202651 CCCGCCTCCTGTTACCATTAG 60.203 57.143 0.00 0.00 0.00 1.73
33 34 0.834612 CCCGCCTCCTGTTACCATTA 59.165 55.000 0.00 0.00 0.00 1.90
34 35 1.607612 CCCGCCTCCTGTTACCATT 59.392 57.895 0.00 0.00 0.00 3.16
35 36 2.375345 CCCCGCCTCCTGTTACCAT 61.375 63.158 0.00 0.00 0.00 3.55
36 37 3.006728 CCCCGCCTCCTGTTACCA 61.007 66.667 0.00 0.00 0.00 3.25
37 38 3.793888 CCCCCGCCTCCTGTTACC 61.794 72.222 0.00 0.00 0.00 2.85
38 39 2.686106 TCCCCCGCCTCCTGTTAC 60.686 66.667 0.00 0.00 0.00 2.50
39 40 2.686106 GTCCCCCGCCTCCTGTTA 60.686 66.667 0.00 0.00 0.00 2.41
40 41 2.833151 TATGTCCCCCGCCTCCTGTT 62.833 60.000 0.00 0.00 0.00 3.16
41 42 2.833151 TTATGTCCCCCGCCTCCTGT 62.833 60.000 0.00 0.00 0.00 4.00
42 43 1.418908 ATTATGTCCCCCGCCTCCTG 61.419 60.000 0.00 0.00 0.00 3.86
43 44 1.073706 ATTATGTCCCCCGCCTCCT 60.074 57.895 0.00 0.00 0.00 3.69
44 45 1.073199 CATTATGTCCCCCGCCTCC 59.927 63.158 0.00 0.00 0.00 4.30
45 46 0.182775 AACATTATGTCCCCCGCCTC 59.817 55.000 0.00 0.00 0.00 4.70
46 47 0.629058 AAACATTATGTCCCCCGCCT 59.371 50.000 0.00 0.00 0.00 5.52
47 48 1.951602 GTAAACATTATGTCCCCCGCC 59.048 52.381 0.00 0.00 0.00 6.13
48 49 1.951602 GGTAAACATTATGTCCCCCGC 59.048 52.381 0.00 0.00 0.00 6.13
49 50 2.092321 TGGGTAAACATTATGTCCCCCG 60.092 50.000 18.71 0.00 35.45 5.73
50 51 3.562182 CTGGGTAAACATTATGTCCCCC 58.438 50.000 18.71 17.21 32.54 5.40
51 52 3.053170 ACCTGGGTAAACATTATGTCCCC 60.053 47.826 15.31 15.77 32.54 4.81
52 53 4.245251 ACCTGGGTAAACATTATGTCCC 57.755 45.455 12.18 12.18 33.74 4.46
53 54 4.334481 CGAACCTGGGTAAACATTATGTCC 59.666 45.833 0.00 0.00 0.00 4.02
54 55 4.334481 CCGAACCTGGGTAAACATTATGTC 59.666 45.833 0.00 0.00 0.00 3.06
55 56 4.266714 CCGAACCTGGGTAAACATTATGT 58.733 43.478 0.00 0.00 0.00 2.29
56 57 3.630312 CCCGAACCTGGGTAAACATTATG 59.370 47.826 0.00 0.00 44.76 1.90
57 58 3.893521 CCCGAACCTGGGTAAACATTAT 58.106 45.455 0.00 0.00 44.76 1.28
58 59 3.353370 CCCGAACCTGGGTAAACATTA 57.647 47.619 0.00 0.00 44.76 1.90
59 60 2.209690 CCCGAACCTGGGTAAACATT 57.790 50.000 0.00 0.00 44.76 2.71
60 61 3.970205 CCCGAACCTGGGTAAACAT 57.030 52.632 0.00 0.00 44.76 2.71
68 69 2.873557 TAGAGAGGGCCCGAACCTGG 62.874 65.000 18.44 0.00 38.79 4.45
69 70 0.760945 ATAGAGAGGGCCCGAACCTG 60.761 60.000 18.44 0.00 38.79 4.00
70 71 0.760945 CATAGAGAGGGCCCGAACCT 60.761 60.000 18.44 14.71 42.18 3.50
71 72 1.749033 CATAGAGAGGGCCCGAACC 59.251 63.158 18.44 7.31 0.00 3.62
72 73 0.759436 TCCATAGAGAGGGCCCGAAC 60.759 60.000 18.44 12.45 0.00 3.95
73 74 0.470080 CTCCATAGAGAGGGCCCGAA 60.470 60.000 18.44 0.98 43.39 4.30
74 75 1.153989 CTCCATAGAGAGGGCCCGA 59.846 63.158 18.44 3.54 43.39 5.14
75 76 3.784573 CTCCATAGAGAGGGCCCG 58.215 66.667 18.44 0.00 43.39 6.13
81 82 7.034967 AGTAGGGTATTACCTCCATAGAGAG 57.965 44.000 12.54 0.00 43.39 3.20
82 83 7.417811 AAGTAGGGTATTACCTCCATAGAGA 57.582 40.000 12.54 0.00 43.39 3.10
83 84 6.664384 GGAAGTAGGGTATTACCTCCATAGAG 59.336 46.154 12.54 0.00 42.09 2.43
84 85 6.337472 AGGAAGTAGGGTATTACCTCCATAGA 59.663 42.308 16.39 0.00 42.09 1.98
85 86 6.437793 CAGGAAGTAGGGTATTACCTCCATAG 59.562 46.154 16.39 6.09 42.09 2.23
86 87 6.320518 CAGGAAGTAGGGTATTACCTCCATA 58.679 44.000 16.39 3.42 42.09 2.74
87 88 5.155905 CAGGAAGTAGGGTATTACCTCCAT 58.844 45.833 16.39 4.17 42.09 3.41
88 89 4.553678 CAGGAAGTAGGGTATTACCTCCA 58.446 47.826 16.39 0.80 42.09 3.86
89 90 3.324268 GCAGGAAGTAGGGTATTACCTCC 59.676 52.174 12.54 10.66 42.09 4.30
90 91 4.224762 AGCAGGAAGTAGGGTATTACCTC 58.775 47.826 12.54 2.11 42.09 3.85
91 92 4.282292 AGCAGGAAGTAGGGTATTACCT 57.718 45.455 12.54 2.07 44.75 3.08
92 93 4.407945 TCAAGCAGGAAGTAGGGTATTACC 59.592 45.833 4.11 4.11 37.60 2.85
93 94 5.609533 TCAAGCAGGAAGTAGGGTATTAC 57.390 43.478 0.00 0.00 0.00 1.89
94 95 6.385759 TCAATCAAGCAGGAAGTAGGGTATTA 59.614 38.462 0.00 0.00 0.00 0.98
95 96 5.191722 TCAATCAAGCAGGAAGTAGGGTATT 59.808 40.000 0.00 0.00 0.00 1.89
96 97 4.721776 TCAATCAAGCAGGAAGTAGGGTAT 59.278 41.667 0.00 0.00 0.00 2.73
97 98 4.101114 TCAATCAAGCAGGAAGTAGGGTA 58.899 43.478 0.00 0.00 0.00 3.69
98 99 2.912956 TCAATCAAGCAGGAAGTAGGGT 59.087 45.455 0.00 0.00 0.00 4.34
99 100 3.634397 TCAATCAAGCAGGAAGTAGGG 57.366 47.619 0.00 0.00 0.00 3.53
100 101 5.033589 AGATCAATCAAGCAGGAAGTAGG 57.966 43.478 0.00 0.00 0.00 3.18
101 102 6.111382 TCAAGATCAATCAAGCAGGAAGTAG 58.889 40.000 0.00 0.00 0.00 2.57
102 103 6.053632 TCAAGATCAATCAAGCAGGAAGTA 57.946 37.500 0.00 0.00 0.00 2.24
103 104 4.914983 TCAAGATCAATCAAGCAGGAAGT 58.085 39.130 0.00 0.00 0.00 3.01
104 105 5.589050 TCATCAAGATCAATCAAGCAGGAAG 59.411 40.000 0.00 0.00 0.00 3.46
105 106 5.503002 TCATCAAGATCAATCAAGCAGGAA 58.497 37.500 0.00 0.00 0.00 3.36
106 107 5.106876 TCATCAAGATCAATCAAGCAGGA 57.893 39.130 0.00 0.00 0.00 3.86
107 108 7.390718 TCATATCATCAAGATCAATCAAGCAGG 59.609 37.037 0.00 0.00 38.19 4.85
108 109 8.324163 TCATATCATCAAGATCAATCAAGCAG 57.676 34.615 0.00 0.00 38.19 4.24
109 110 7.937394 ACTCATATCATCAAGATCAATCAAGCA 59.063 33.333 0.00 0.00 38.19 3.91
110 111 8.325421 ACTCATATCATCAAGATCAATCAAGC 57.675 34.615 0.00 0.00 38.19 4.01
130 131 9.201989 TGGTAGATCAACTCTTGTAATACTCAT 57.798 33.333 0.00 0.00 35.28 2.90
131 132 8.467598 GTGGTAGATCAACTCTTGTAATACTCA 58.532 37.037 0.00 0.00 35.28 3.41
132 133 7.644551 CGTGGTAGATCAACTCTTGTAATACTC 59.355 40.741 0.00 0.00 35.28 2.59
133 134 7.338703 TCGTGGTAGATCAACTCTTGTAATACT 59.661 37.037 0.00 0.00 35.28 2.12
134 135 7.478322 TCGTGGTAGATCAACTCTTGTAATAC 58.522 38.462 0.00 0.00 35.28 1.89
135 136 7.555195 TCTCGTGGTAGATCAACTCTTGTAATA 59.445 37.037 0.00 0.00 35.28 0.98
136 137 6.377429 TCTCGTGGTAGATCAACTCTTGTAAT 59.623 38.462 0.00 0.00 35.28 1.89
137 138 5.708697 TCTCGTGGTAGATCAACTCTTGTAA 59.291 40.000 0.00 0.00 35.28 2.41
138 139 5.250982 TCTCGTGGTAGATCAACTCTTGTA 58.749 41.667 0.00 0.00 35.28 2.41
139 140 4.079970 TCTCGTGGTAGATCAACTCTTGT 58.920 43.478 0.00 0.00 35.28 3.16
140 141 4.703645 TCTCGTGGTAGATCAACTCTTG 57.296 45.455 0.00 0.00 35.28 3.02
155 156 6.558908 GGGTTTAGCCTCTACGATCTCGTG 62.559 54.167 15.08 5.81 44.52 4.35
156 157 4.551164 GGGTTTAGCCTCTACGATCTCGT 61.551 52.174 10.40 10.40 45.75 4.18
157 158 2.030981 GGGTTTAGCCTCTACGATCTCG 60.031 54.545 0.00 0.00 40.54 4.04
158 159 3.224269 AGGGTTTAGCCTCTACGATCTC 58.776 50.000 0.00 0.00 37.43 2.75
159 160 3.315880 AGGGTTTAGCCTCTACGATCT 57.684 47.619 0.00 0.00 37.43 2.75
160 161 4.396522 TCTAGGGTTTAGCCTCTACGATC 58.603 47.826 3.32 0.00 37.43 3.69
161 162 4.450305 TCTAGGGTTTAGCCTCTACGAT 57.550 45.455 3.32 0.00 37.43 3.73
162 163 3.939740 TCTAGGGTTTAGCCTCTACGA 57.060 47.619 3.32 0.00 37.43 3.43
163 164 3.243468 GCTTCTAGGGTTTAGCCTCTACG 60.243 52.174 3.32 0.00 37.43 3.51
164 165 3.962063 AGCTTCTAGGGTTTAGCCTCTAC 59.038 47.826 3.32 0.00 37.43 2.59
165 166 4.267341 AGCTTCTAGGGTTTAGCCTCTA 57.733 45.455 3.32 0.00 37.43 2.43
166 167 3.123392 AGCTTCTAGGGTTTAGCCTCT 57.877 47.619 3.32 0.00 37.43 3.69
167 168 3.243941 GCTAGCTTCTAGGGTTTAGCCTC 60.244 52.174 7.70 0.00 37.43 4.70
168 169 2.701423 GCTAGCTTCTAGGGTTTAGCCT 59.299 50.000 7.70 5.72 37.43 4.58
169 170 2.224329 GGCTAGCTTCTAGGGTTTAGCC 60.224 54.545 15.72 15.56 44.26 3.93
170 171 2.701423 AGGCTAGCTTCTAGGGTTTAGC 59.299 50.000 15.72 0.00 34.32 3.09
171 172 5.775701 TCATAGGCTAGCTTCTAGGGTTTAG 59.224 44.000 15.72 0.00 0.00 1.85
172 173 5.712752 TCATAGGCTAGCTTCTAGGGTTTA 58.287 41.667 15.72 0.00 0.00 2.01
173 174 4.557705 TCATAGGCTAGCTTCTAGGGTTT 58.442 43.478 15.72 0.00 0.00 3.27
174 175 4.200447 TCATAGGCTAGCTTCTAGGGTT 57.800 45.455 15.72 0.00 0.00 4.11
175 176 3.905493 TCATAGGCTAGCTTCTAGGGT 57.095 47.619 15.72 0.00 0.00 4.34
176 177 6.609212 TCATAATCATAGGCTAGCTTCTAGGG 59.391 42.308 15.72 5.58 0.00 3.53
177 178 7.652524 TCATAATCATAGGCTAGCTTCTAGG 57.347 40.000 15.72 10.25 0.00 3.02
197 198 9.476202 CGTAGGACAAGAACAATCATAATCATA 57.524 33.333 0.00 0.00 0.00 2.15
198 199 8.370493 CGTAGGACAAGAACAATCATAATCAT 57.630 34.615 0.00 0.00 0.00 2.45
199 200 7.770801 CGTAGGACAAGAACAATCATAATCA 57.229 36.000 0.00 0.00 0.00 2.57
237 238 3.260128 CCCCTCCGGTGTCTATATAAACC 59.740 52.174 0.00 0.68 0.00 3.27
238 239 3.260128 CCCCCTCCGGTGTCTATATAAAC 59.740 52.174 0.00 0.00 0.00 2.01
239 240 3.513517 CCCCCTCCGGTGTCTATATAAA 58.486 50.000 0.00 0.00 0.00 1.40
240 241 2.824303 GCCCCCTCCGGTGTCTATATAA 60.824 54.545 0.00 0.00 0.00 0.98
241 242 1.272872 GCCCCCTCCGGTGTCTATATA 60.273 57.143 0.00 0.00 0.00 0.86
242 243 0.544595 GCCCCCTCCGGTGTCTATAT 60.545 60.000 0.00 0.00 0.00 0.86
243 244 1.152398 GCCCCCTCCGGTGTCTATA 60.152 63.158 0.00 0.00 0.00 1.31
244 245 1.661990 TAGCCCCCTCCGGTGTCTAT 61.662 60.000 0.00 0.00 0.00 1.98
245 246 2.294170 CTAGCCCCCTCCGGTGTCTA 62.294 65.000 0.00 0.00 0.00 2.59
246 247 3.680196 TAGCCCCCTCCGGTGTCT 61.680 66.667 0.00 0.00 0.00 3.41
247 248 3.155167 CTAGCCCCCTCCGGTGTC 61.155 72.222 0.00 0.00 0.00 3.67
248 249 4.798682 CCTAGCCCCCTCCGGTGT 62.799 72.222 0.00 0.00 0.00 4.16
251 252 3.399911 TAACCCTAGCCCCCTCCGG 62.400 68.421 0.00 0.00 0.00 5.14
252 253 2.138831 GTAACCCTAGCCCCCTCCG 61.139 68.421 0.00 0.00 0.00 4.63
253 254 1.003835 TGTAACCCTAGCCCCCTCC 59.996 63.158 0.00 0.00 0.00 4.30
254 255 0.619543 TGTGTAACCCTAGCCCCCTC 60.620 60.000 0.00 0.00 34.36 4.30
255 256 0.620700 CTGTGTAACCCTAGCCCCCT 60.621 60.000 0.00 0.00 34.36 4.79
256 257 0.619543 TCTGTGTAACCCTAGCCCCC 60.620 60.000 0.00 0.00 34.36 5.40
257 258 0.831307 CTCTGTGTAACCCTAGCCCC 59.169 60.000 0.00 0.00 34.36 5.80
258 259 1.481363 GACTCTGTGTAACCCTAGCCC 59.519 57.143 0.00 0.00 34.36 5.19
259 260 1.134560 CGACTCTGTGTAACCCTAGCC 59.865 57.143 0.00 0.00 34.36 3.93
260 261 1.134560 CCGACTCTGTGTAACCCTAGC 59.865 57.143 0.00 0.00 34.36 3.42
261 262 2.444421 ACCGACTCTGTGTAACCCTAG 58.556 52.381 0.00 0.00 34.36 3.02
262 263 2.592102 ACCGACTCTGTGTAACCCTA 57.408 50.000 0.00 0.00 34.36 3.53
263 264 1.713297 AACCGACTCTGTGTAACCCT 58.287 50.000 0.00 0.00 34.36 4.34
264 265 3.881937 ATAACCGACTCTGTGTAACCC 57.118 47.619 0.00 0.00 34.36 4.11
265 266 5.587844 TCTCTATAACCGACTCTGTGTAACC 59.412 44.000 0.00 0.00 34.36 2.85
266 267 6.674694 TCTCTATAACCGACTCTGTGTAAC 57.325 41.667 0.00 0.00 37.35 2.50
267 268 7.692460 TTTCTCTATAACCGACTCTGTGTAA 57.308 36.000 0.00 0.00 0.00 2.41
268 269 7.148120 CCTTTTCTCTATAACCGACTCTGTGTA 60.148 40.741 0.00 0.00 0.00 2.90
269 270 6.350277 CCTTTTCTCTATAACCGACTCTGTGT 60.350 42.308 0.00 0.00 0.00 3.72
270 271 6.037098 CCTTTTCTCTATAACCGACTCTGTG 58.963 44.000 0.00 0.00 0.00 3.66
271 272 5.950549 TCCTTTTCTCTATAACCGACTCTGT 59.049 40.000 0.00 0.00 0.00 3.41
272 273 6.452494 TCCTTTTCTCTATAACCGACTCTG 57.548 41.667 0.00 0.00 0.00 3.35
273 274 7.562088 AGATTCCTTTTCTCTATAACCGACTCT 59.438 37.037 0.00 0.00 0.00 3.24
274 275 7.718525 AGATTCCTTTTCTCTATAACCGACTC 58.281 38.462 0.00 0.00 0.00 3.36
275 276 7.663043 AGATTCCTTTTCTCTATAACCGACT 57.337 36.000 0.00 0.00 0.00 4.18
276 277 8.411683 TGTAGATTCCTTTTCTCTATAACCGAC 58.588 37.037 0.00 0.00 0.00 4.79
277 278 8.529424 TGTAGATTCCTTTTCTCTATAACCGA 57.471 34.615 0.00 0.00 0.00 4.69
283 284 9.535170 TCGGATATGTAGATTCCTTTTCTCTAT 57.465 33.333 0.00 0.00 0.00 1.98
284 285 8.935614 TCGGATATGTAGATTCCTTTTCTCTA 57.064 34.615 0.00 0.00 0.00 2.43
285 286 7.841282 TCGGATATGTAGATTCCTTTTCTCT 57.159 36.000 0.00 0.00 0.00 3.10
286 287 9.495572 AATTCGGATATGTAGATTCCTTTTCTC 57.504 33.333 0.00 0.00 0.00 2.87
287 288 9.277783 CAATTCGGATATGTAGATTCCTTTTCT 57.722 33.333 0.00 0.00 0.00 2.52
288 289 9.057089 ACAATTCGGATATGTAGATTCCTTTTC 57.943 33.333 0.00 0.00 0.00 2.29
289 290 8.980481 ACAATTCGGATATGTAGATTCCTTTT 57.020 30.769 0.00 0.00 0.00 2.27
290 291 8.210946 TGACAATTCGGATATGTAGATTCCTTT 58.789 33.333 0.00 0.00 0.00 3.11
291 292 7.735917 TGACAATTCGGATATGTAGATTCCTT 58.264 34.615 0.00 0.00 0.00 3.36
292 293 7.303182 TGACAATTCGGATATGTAGATTCCT 57.697 36.000 0.00 0.00 0.00 3.36
293 294 7.360438 GCTTGACAATTCGGATATGTAGATTCC 60.360 40.741 0.00 0.00 0.00 3.01
294 295 7.386299 AGCTTGACAATTCGGATATGTAGATTC 59.614 37.037 0.00 0.00 0.00 2.52
295 296 7.220030 AGCTTGACAATTCGGATATGTAGATT 58.780 34.615 0.00 0.00 0.00 2.40
296 297 6.763355 AGCTTGACAATTCGGATATGTAGAT 58.237 36.000 0.00 0.00 0.00 1.98
297 298 6.161855 AGCTTGACAATTCGGATATGTAGA 57.838 37.500 0.00 0.00 0.00 2.59
298 299 6.653183 CAAGCTTGACAATTCGGATATGTAG 58.347 40.000 22.31 0.00 0.00 2.74
299 300 5.007626 GCAAGCTTGACAATTCGGATATGTA 59.992 40.000 30.39 0.00 0.00 2.29
300 301 4.201950 GCAAGCTTGACAATTCGGATATGT 60.202 41.667 30.39 0.00 0.00 2.29
301 302 4.285292 GCAAGCTTGACAATTCGGATATG 58.715 43.478 30.39 0.00 0.00 1.78
302 303 3.316308 GGCAAGCTTGACAATTCGGATAT 59.684 43.478 30.39 0.00 35.83 1.63
303 304 2.682856 GGCAAGCTTGACAATTCGGATA 59.317 45.455 30.39 0.00 35.83 2.59
304 305 1.474077 GGCAAGCTTGACAATTCGGAT 59.526 47.619 30.39 0.00 35.83 4.18
305 306 0.881118 GGCAAGCTTGACAATTCGGA 59.119 50.000 30.39 0.00 35.83 4.55
306 307 0.883833 AGGCAAGCTTGACAATTCGG 59.116 50.000 33.20 2.49 39.18 4.30
307 308 2.589014 GAAGGCAAGCTTGACAATTCG 58.411 47.619 33.20 3.27 39.18 3.34
308 309 2.297033 TGGAAGGCAAGCTTGACAATTC 59.703 45.455 33.20 26.26 39.18 2.17
309 310 2.036346 GTGGAAGGCAAGCTTGACAATT 59.964 45.455 33.20 20.16 39.18 2.32
310 311 1.615392 GTGGAAGGCAAGCTTGACAAT 59.385 47.619 33.20 21.72 39.18 2.71
311 312 1.032014 GTGGAAGGCAAGCTTGACAA 58.968 50.000 33.20 13.52 39.18 3.18
312 313 1.165907 CGTGGAAGGCAAGCTTGACA 61.166 55.000 33.20 17.35 39.18 3.58
313 314 1.576421 CGTGGAAGGCAAGCTTGAC 59.424 57.895 30.39 28.05 36.08 3.18
314 315 4.063529 CGTGGAAGGCAAGCTTGA 57.936 55.556 30.39 4.77 0.00 3.02
323 324 0.035458 ACTCTCCTTTGCGTGGAAGG 59.965 55.000 7.12 7.12 44.06 3.46
324 325 1.433534 GACTCTCCTTTGCGTGGAAG 58.566 55.000 0.00 0.00 32.61 3.46
325 326 0.034896 GGACTCTCCTTTGCGTGGAA 59.965 55.000 0.00 0.00 32.53 3.53
326 327 1.671742 GGACTCTCCTTTGCGTGGA 59.328 57.895 0.00 0.00 32.53 4.02
327 328 1.376037 GGGACTCTCCTTTGCGTGG 60.376 63.158 0.00 0.00 36.57 4.94
328 329 0.951040 GTGGGACTCTCCTTTGCGTG 60.951 60.000 0.00 0.00 36.57 5.34
329 330 1.371558 GTGGGACTCTCCTTTGCGT 59.628 57.895 0.00 0.00 36.57 5.24
330 331 1.376037 GGTGGGACTCTCCTTTGCG 60.376 63.158 0.00 0.00 36.57 4.85
331 332 1.002011 GGGTGGGACTCTCCTTTGC 60.002 63.158 0.00 0.00 36.57 3.68
332 333 1.192146 TCGGGTGGGACTCTCCTTTG 61.192 60.000 0.00 0.00 36.57 2.77
333 334 0.473117 TTCGGGTGGGACTCTCCTTT 60.473 55.000 0.00 0.00 36.57 3.11
334 335 1.157751 TTCGGGTGGGACTCTCCTT 59.842 57.895 0.00 0.00 36.57 3.36
335 336 1.609794 GTTCGGGTGGGACTCTCCT 60.610 63.158 0.00 0.00 36.57 3.69
336 337 1.911766 TGTTCGGGTGGGACTCTCC 60.912 63.158 0.00 0.00 35.23 3.71
337 338 1.292541 GTGTTCGGGTGGGACTCTC 59.707 63.158 0.00 0.00 0.00 3.20
338 339 2.571216 CGTGTTCGGGTGGGACTCT 61.571 63.158 0.00 0.00 0.00 3.24
339 340 2.048503 CGTGTTCGGGTGGGACTC 60.049 66.667 0.00 0.00 0.00 3.36
340 341 2.522436 TCGTGTTCGGGTGGGACT 60.522 61.111 0.00 0.00 37.69 3.85
341 342 2.048503 CTCGTGTTCGGGTGGGAC 60.049 66.667 0.00 0.00 37.69 4.46
342 343 2.203523 TCTCGTGTTCGGGTGGGA 60.204 61.111 0.00 0.00 38.84 4.37
343 344 2.048503 GTCTCGTGTTCGGGTGGG 60.049 66.667 0.00 0.00 38.84 4.61
344 345 2.410638 TTCGTCTCGTGTTCGGGTGG 62.411 60.000 0.00 0.00 38.84 4.61
345 346 1.002250 CTTCGTCTCGTGTTCGGGTG 61.002 60.000 0.00 0.00 38.84 4.61
346 347 1.285023 CTTCGTCTCGTGTTCGGGT 59.715 57.895 0.00 0.00 38.84 5.28
347 348 0.728466 GACTTCGTCTCGTGTTCGGG 60.728 60.000 5.44 0.00 39.14 5.14
348 349 0.237761 AGACTTCGTCTCGTGTTCGG 59.762 55.000 0.00 0.00 38.71 4.30
349 350 1.970608 GAAGACTTCGTCTCGTGTTCG 59.029 52.381 0.00 0.00 42.59 3.95
350 351 2.996155 TGAAGACTTCGTCTCGTGTTC 58.004 47.619 10.56 0.00 42.59 3.18
351 352 3.431922 TTGAAGACTTCGTCTCGTGTT 57.568 42.857 10.56 0.00 42.59 3.32
352 353 3.253677 AGATTGAAGACTTCGTCTCGTGT 59.746 43.478 14.05 0.00 42.59 4.49
353 354 3.827625 AGATTGAAGACTTCGTCTCGTG 58.172 45.455 14.05 0.00 42.59 4.35
354 355 4.506886 AAGATTGAAGACTTCGTCTCGT 57.493 40.909 18.03 8.11 42.59 4.18
355 356 8.286800 AGATATAAGATTGAAGACTTCGTCTCG 58.713 37.037 18.03 0.00 42.59 4.04
356 357 9.959749 AAGATATAAGATTGAAGACTTCGTCTC 57.040 33.333 18.03 11.38 42.59 3.36
357 358 9.959749 GAAGATATAAGATTGAAGACTTCGTCT 57.040 33.333 14.05 14.05 45.64 4.18
358 359 9.737427 TGAAGATATAAGATTGAAGACTTCGTC 57.263 33.333 10.56 10.67 35.49 4.20
371 372 9.261035 ACCGAATGGACTATGAAGATATAAGAT 57.739 33.333 0.00 0.00 39.21 2.40
372 373 8.651589 ACCGAATGGACTATGAAGATATAAGA 57.348 34.615 0.00 0.00 39.21 2.10
373 374 7.976734 GGACCGAATGGACTATGAAGATATAAG 59.023 40.741 0.00 0.00 39.21 1.73
374 375 7.362660 CGGACCGAATGGACTATGAAGATATAA 60.363 40.741 8.64 0.00 39.21 0.98
375 376 6.095021 CGGACCGAATGGACTATGAAGATATA 59.905 42.308 8.64 0.00 39.21 0.86
376 377 5.105716 CGGACCGAATGGACTATGAAGATAT 60.106 44.000 8.64 0.00 39.21 1.63
377 378 4.217767 CGGACCGAATGGACTATGAAGATA 59.782 45.833 8.64 0.00 39.21 1.98
378 379 3.005897 CGGACCGAATGGACTATGAAGAT 59.994 47.826 8.64 0.00 39.21 2.40
379 380 2.361119 CGGACCGAATGGACTATGAAGA 59.639 50.000 8.64 0.00 39.21 2.87
380 381 2.545952 CCGGACCGAATGGACTATGAAG 60.546 54.545 17.49 0.00 39.21 3.02
381 382 1.411246 CCGGACCGAATGGACTATGAA 59.589 52.381 17.49 0.00 39.21 2.57
382 383 1.037493 CCGGACCGAATGGACTATGA 58.963 55.000 17.49 0.00 39.21 2.15
383 384 0.600255 GCCGGACCGAATGGACTATG 60.600 60.000 17.49 0.00 39.21 2.23
384 385 1.046472 TGCCGGACCGAATGGACTAT 61.046 55.000 17.49 0.00 39.21 2.12
385 386 1.046472 ATGCCGGACCGAATGGACTA 61.046 55.000 17.49 0.00 39.21 2.59
386 387 1.046472 TATGCCGGACCGAATGGACT 61.046 55.000 17.49 0.00 39.21 3.85
387 388 0.179067 TTATGCCGGACCGAATGGAC 60.179 55.000 17.49 0.00 39.21 4.02
388 389 0.105964 CTTATGCCGGACCGAATGGA 59.894 55.000 17.49 0.00 39.21 3.41
389 390 1.507141 GCTTATGCCGGACCGAATGG 61.507 60.000 17.49 0.00 42.84 3.16
390 391 0.813610 TGCTTATGCCGGACCGAATG 60.814 55.000 17.49 0.00 38.71 2.67
391 392 0.108585 ATGCTTATGCCGGACCGAAT 59.891 50.000 17.49 11.26 38.71 3.34
392 393 0.753867 TATGCTTATGCCGGACCGAA 59.246 50.000 17.49 3.17 38.71 4.30
393 394 0.973632 ATATGCTTATGCCGGACCGA 59.026 50.000 17.49 0.00 38.71 4.69
394 395 2.094182 ACTATATGCTTATGCCGGACCG 60.094 50.000 5.05 6.99 38.71 4.79
395 396 3.522553 GACTATATGCTTATGCCGGACC 58.477 50.000 5.05 0.00 38.71 4.46
396 397 3.522553 GGACTATATGCTTATGCCGGAC 58.477 50.000 5.05 0.00 38.71 4.79
397 398 2.165641 CGGACTATATGCTTATGCCGGA 59.834 50.000 5.05 0.00 38.71 5.14
398 399 2.540515 CGGACTATATGCTTATGCCGG 58.459 52.381 16.02 0.00 38.71 6.13
399 400 2.540515 CCGGACTATATGCTTATGCCG 58.459 52.381 16.49 16.49 38.71 5.69
400 401 2.093447 AGCCGGACTATATGCTTATGCC 60.093 50.000 5.05 1.39 38.71 4.40
401 402 2.932614 CAGCCGGACTATATGCTTATGC 59.067 50.000 5.05 0.00 40.20 3.14
402 403 4.177026 GACAGCCGGACTATATGCTTATG 58.823 47.826 5.05 0.00 30.08 1.90
403 404 3.195825 GGACAGCCGGACTATATGCTTAT 59.804 47.826 5.05 0.00 30.08 1.73
404 405 2.561419 GGACAGCCGGACTATATGCTTA 59.439 50.000 5.05 0.00 30.08 3.09
405 406 1.344763 GGACAGCCGGACTATATGCTT 59.655 52.381 5.05 0.00 30.08 3.91
406 407 0.969894 GGACAGCCGGACTATATGCT 59.030 55.000 5.05 0.00 33.52 3.79
407 408 3.516578 GGACAGCCGGACTATATGC 57.483 57.895 5.05 0.00 0.00 3.14
419 420 3.674050 TAGGGGGTCCTCGGACAGC 62.674 68.421 17.21 1.56 46.20 4.40
420 421 0.398664 ATTAGGGGGTCCTCGGACAG 60.399 60.000 17.21 0.00 46.20 3.51
421 422 0.398098 GATTAGGGGGTCCTCGGACA 60.398 60.000 17.21 0.00 46.20 4.02
422 423 1.120184 GGATTAGGGGGTCCTCGGAC 61.120 65.000 7.57 7.57 43.66 4.79
423 424 1.235112 GGATTAGGGGGTCCTCGGA 59.765 63.158 0.00 0.00 43.66 4.55
424 425 1.074775 TGGATTAGGGGGTCCTCGG 60.075 63.158 0.00 0.00 43.66 4.63
425 426 1.122019 CCTGGATTAGGGGGTCCTCG 61.122 65.000 0.00 0.00 43.66 4.63
426 427 2.855669 CCTGGATTAGGGGGTCCTC 58.144 63.158 0.00 0.00 43.66 3.71
434 435 2.043227 GTGAGGGAGTCCTGGATTAGG 58.957 57.143 9.58 0.00 45.05 2.69
435 436 2.043227 GGTGAGGGAGTCCTGGATTAG 58.957 57.143 9.58 0.00 45.05 1.73
436 437 1.344087 GGGTGAGGGAGTCCTGGATTA 60.344 57.143 9.58 0.00 45.05 1.75
437 438 0.621862 GGGTGAGGGAGTCCTGGATT 60.622 60.000 9.58 0.00 45.05 3.01
438 439 1.003573 GGGTGAGGGAGTCCTGGAT 59.996 63.158 9.58 0.00 45.05 3.41
439 440 2.450243 GGGTGAGGGAGTCCTGGA 59.550 66.667 9.58 0.00 45.05 3.86
440 441 3.077556 CGGGTGAGGGAGTCCTGG 61.078 72.222 9.58 0.00 45.05 4.45
441 442 3.077556 CCGGGTGAGGGAGTCCTG 61.078 72.222 9.58 0.00 45.05 3.86
443 444 3.391382 CACCGGGTGAGGGAGTCC 61.391 72.222 22.77 0.00 35.23 3.85
444 445 4.083862 GCACCGGGTGAGGGAGTC 62.084 72.222 30.65 7.14 35.23 3.36
445 446 4.640690 AGCACCGGGTGAGGGAGT 62.641 66.667 30.65 4.22 35.23 3.85
446 447 4.087892 CAGCACCGGGTGAGGGAG 62.088 72.222 30.65 10.39 45.29 4.30
449 450 2.484287 AAATCCAGCACCGGGTGAGG 62.484 60.000 30.65 27.30 45.29 3.86
450 451 1.002134 AAATCCAGCACCGGGTGAG 60.002 57.895 30.65 20.18 45.29 3.51
451 452 1.303236 CAAATCCAGCACCGGGTGA 60.303 57.895 30.65 10.14 45.29 4.02
452 453 1.603455 ACAAATCCAGCACCGGGTG 60.603 57.895 22.87 22.87 42.14 4.61
453 454 1.603455 CACAAATCCAGCACCGGGT 60.603 57.895 6.32 0.00 0.00 5.28
454 455 2.342650 CCACAAATCCAGCACCGGG 61.343 63.158 6.32 0.00 0.00 5.73
455 456 0.680921 ATCCACAAATCCAGCACCGG 60.681 55.000 0.00 0.00 0.00 5.28
456 457 0.452987 CATCCACAAATCCAGCACCG 59.547 55.000 0.00 0.00 0.00 4.94
457 458 1.474077 GACATCCACAAATCCAGCACC 59.526 52.381 0.00 0.00 0.00 5.01
458 459 1.131126 CGACATCCACAAATCCAGCAC 59.869 52.381 0.00 0.00 0.00 4.40
463 464 2.614057 GACATCCGACATCCACAAATCC 59.386 50.000 0.00 0.00 0.00 3.01
500 502 1.456919 AAACCCCTGGCTTAAGAGGT 58.543 50.000 6.67 1.37 0.00 3.85
513 519 5.462530 AGTAAACAACATTGCTAAACCCC 57.537 39.130 0.00 0.00 0.00 4.95
523 529 5.587043 TCGACCTGAACAAGTAAACAACATT 59.413 36.000 0.00 0.00 0.00 2.71
524 530 5.120399 TCGACCTGAACAAGTAAACAACAT 58.880 37.500 0.00 0.00 0.00 2.71
545 551 1.142748 GAGAGACATGGGGTGCTCG 59.857 63.158 0.00 0.00 36.63 5.03
584 590 1.067985 TGGCACAAACACAATATGGCG 60.068 47.619 0.00 0.00 38.60 5.69
639 646 5.252969 TGCTTGCATATCTTTCCATTGAC 57.747 39.130 0.00 0.00 0.00 3.18
681 688 4.785341 GCTTCGACGACAAATCACAGTTTT 60.785 41.667 0.00 0.00 0.00 2.43
682 689 3.303132 GCTTCGACGACAAATCACAGTTT 60.303 43.478 0.00 0.00 0.00 2.66
685 692 1.126846 GGCTTCGACGACAAATCACAG 59.873 52.381 0.00 0.00 0.00 3.66
688 695 1.272490 AGAGGCTTCGACGACAAATCA 59.728 47.619 0.00 0.00 0.00 2.57
689 696 1.921230 GAGAGGCTTCGACGACAAATC 59.079 52.381 0.00 0.00 0.00 2.17
690 697 1.404315 GGAGAGGCTTCGACGACAAAT 60.404 52.381 0.00 0.00 0.00 2.32
698 706 1.038130 GGCACTAGGAGAGGCTTCGA 61.038 60.000 0.00 0.00 0.00 3.71
714 722 5.253330 CCTCTGTTCCTAAATACAAAGGCA 58.747 41.667 0.00 0.00 26.66 4.75
721 729 4.967442 ACCCTACCCTCTGTTCCTAAATAC 59.033 45.833 0.00 0.00 0.00 1.89
735 825 6.031386 TGGTTTAAATAGTACACCCTACCCT 58.969 40.000 0.00 0.00 0.00 4.34
736 826 6.312141 TGGTTTAAATAGTACACCCTACCC 57.688 41.667 0.00 0.00 0.00 3.69
737 827 7.884877 AGTTTGGTTTAAATAGTACACCCTACC 59.115 37.037 0.00 0.00 0.00 3.18
738 828 8.724229 CAGTTTGGTTTAAATAGTACACCCTAC 58.276 37.037 0.00 0.00 0.00 3.18
739 829 7.391275 GCAGTTTGGTTTAAATAGTACACCCTA 59.609 37.037 0.00 0.00 0.00 3.53
781 1929 8.539770 TGAAATTTTAGTGAAAAAGTGCAACA 57.460 26.923 0.00 0.00 37.66 3.33
853 2001 7.781324 ATTCATCTCTTGCTTCCCTTAAAAA 57.219 32.000 0.00 0.00 0.00 1.94
854 2002 7.781324 AATTCATCTCTTGCTTCCCTTAAAA 57.219 32.000 0.00 0.00 0.00 1.52
855 2003 8.109634 ACTAATTCATCTCTTGCTTCCCTTAAA 58.890 33.333 0.00 0.00 0.00 1.52
856 2004 7.633789 ACTAATTCATCTCTTGCTTCCCTTAA 58.366 34.615 0.00 0.00 0.00 1.85
857 2005 7.200434 ACTAATTCATCTCTTGCTTCCCTTA 57.800 36.000 0.00 0.00 0.00 2.69
858 2006 6.072199 ACTAATTCATCTCTTGCTTCCCTT 57.928 37.500 0.00 0.00 0.00 3.95
859 2007 5.707066 ACTAATTCATCTCTTGCTTCCCT 57.293 39.130 0.00 0.00 0.00 4.20
860 2008 6.375455 TGAAACTAATTCATCTCTTGCTTCCC 59.625 38.462 0.00 0.00 43.08 3.97
861 2009 7.383102 TGAAACTAATTCATCTCTTGCTTCC 57.617 36.000 0.00 0.00 43.08 3.46
873 2261 8.095792 ACAATCAATTGGCATGAAACTAATTCA 58.904 29.630 5.42 0.00 45.45 2.57
888 2276 5.473039 GTCAGGGAAGAAACAATCAATTGG 58.527 41.667 5.42 0.00 41.96 3.16
906 2294 2.279186 TGTGTGCGTGTCGTCAGG 60.279 61.111 0.00 0.00 0.00 3.86
984 2372 3.370315 CCTTCATTGCTTGCTCTACTCCT 60.370 47.826 0.00 0.00 0.00 3.69
995 2383 2.690778 GCGACGGCCTTCATTGCTT 61.691 57.895 10.24 0.00 0.00 3.91
996 2384 3.127533 GCGACGGCCTTCATTGCT 61.128 61.111 10.24 0.00 0.00 3.91
1017 2405 4.675029 ACGCCGTGGTACTGGTGC 62.675 66.667 11.20 1.59 39.39 5.01
1224 2612 0.116342 TACTCAAGTCCCAGGGAGCA 59.884 55.000 9.15 0.00 29.39 4.26
1395 2793 7.913789 TCTTATTCTGAAAAGTTAGGTAGCCA 58.086 34.615 0.00 0.00 0.00 4.75
1396 2794 8.788325 TTCTTATTCTGAAAAGTTAGGTAGCC 57.212 34.615 0.00 0.00 0.00 3.93
1406 2828 9.362539 CACCCATTTCATTCTTATTCTGAAAAG 57.637 33.333 0.00 0.66 40.94 2.27
1448 2876 4.546829 TCAGTAAGTGTACCACCCAATC 57.453 45.455 0.00 0.00 34.49 2.67
1492 2920 6.021030 ACTGTTACTATCAGGGTTCCAGTTA 58.979 40.000 0.00 0.00 37.25 2.24
1494 2922 4.426704 ACTGTTACTATCAGGGTTCCAGT 58.573 43.478 0.00 0.00 37.25 4.00
1495 2923 6.323996 TGATACTGTTACTATCAGGGTTCCAG 59.676 42.308 0.00 0.00 37.25 3.86
1496 2924 6.199376 TGATACTGTTACTATCAGGGTTCCA 58.801 40.000 0.00 0.00 37.25 3.53
1497 2925 6.726490 TGATACTGTTACTATCAGGGTTCC 57.274 41.667 0.00 0.00 37.25 3.62
1498 2926 7.952671 TGATGATACTGTTACTATCAGGGTTC 58.047 38.462 1.84 0.00 34.76 3.62
1499 2927 7.914427 TGATGATACTGTTACTATCAGGGTT 57.086 36.000 1.84 0.00 34.76 4.11
1500 2928 7.914427 TTGATGATACTGTTACTATCAGGGT 57.086 36.000 1.84 0.00 34.76 4.34
1501 2929 9.613428 TTTTTGATGATACTGTTACTATCAGGG 57.387 33.333 1.84 0.00 34.76 4.45
1524 2952 9.462606 CTTTACTACTATCAGGGTTCCATTTTT 57.537 33.333 0.00 0.00 0.00 1.94
1525 2953 7.556635 GCTTTACTACTATCAGGGTTCCATTTT 59.443 37.037 0.00 0.00 0.00 1.82
1526 2954 7.054751 GCTTTACTACTATCAGGGTTCCATTT 58.945 38.462 0.00 0.00 0.00 2.32
1527 2955 6.387220 AGCTTTACTACTATCAGGGTTCCATT 59.613 38.462 0.00 0.00 0.00 3.16
1528 2956 5.905913 AGCTTTACTACTATCAGGGTTCCAT 59.094 40.000 0.00 0.00 0.00 3.41
1529 2957 5.278061 AGCTTTACTACTATCAGGGTTCCA 58.722 41.667 0.00 0.00 0.00 3.53
1545 2973 2.656192 TTCGTCGTGCAAAGCTTTAC 57.344 45.000 12.25 6.96 0.00 2.01
1547 2975 2.774439 AATTCGTCGTGCAAAGCTTT 57.226 40.000 5.69 5.69 0.00 3.51
1577 3005 7.328404 TGTATGGCTGAAATTCCCTATATCA 57.672 36.000 0.00 0.00 0.00 2.15
1629 3062 4.286297 AGCACTTCCACAGCATAAACTA 57.714 40.909 0.00 0.00 0.00 2.24
1685 3120 5.774498 AGTTCGATATCACAGTATCAGCA 57.226 39.130 3.12 0.00 31.89 4.41
1687 3122 9.899226 TCATAAAGTTCGATATCACAGTATCAG 57.101 33.333 3.12 0.00 31.89 2.90
1752 3336 5.070001 CCCAAACCAAGAACAAGACAGATA 58.930 41.667 0.00 0.00 0.00 1.98
1753 3337 3.891366 CCCAAACCAAGAACAAGACAGAT 59.109 43.478 0.00 0.00 0.00 2.90
1757 3341 2.031870 AGCCCAAACCAAGAACAAGAC 58.968 47.619 0.00 0.00 0.00 3.01
1758 3342 2.452600 AGCCCAAACCAAGAACAAGA 57.547 45.000 0.00 0.00 0.00 3.02
1776 3360 4.692155 TCACAAGTGAGCACATTGTCATAG 59.308 41.667 12.33 5.67 33.59 2.23
1785 3369 6.822667 AAATGATTATCACAAGTGAGCACA 57.177 33.333 8.99 6.79 43.61 4.57
1816 3400 7.141363 GCCGCTAACAATATCAAGATTGAAAT 58.859 34.615 4.48 0.00 41.13 2.17
1913 3500 5.793030 ATGTAGGCATACTTCAGTACTCC 57.207 43.478 10.25 0.00 32.73 3.85
1934 3521 6.789457 TCCTCCATCTCCTACACAATTCATAT 59.211 38.462 0.00 0.00 0.00 1.78
1944 3531 2.317900 TCCCTTTCCTCCATCTCCTACA 59.682 50.000 0.00 0.00 0.00 2.74
2108 3695 2.570365 TTGCCATGCGAGCAATCTT 58.430 47.368 0.57 0.00 44.95 2.40
2234 3821 6.653273 AGCATAACGATTCGATTGGATATG 57.347 37.500 13.95 12.21 0.00 1.78
2395 3986 6.094048 GGCTGTAGCAATGAACTTATGAAAGA 59.906 38.462 6.18 0.00 44.36 2.52
2421 4012 6.212589 TGTGTAATGGATCTCAGTTTGGTCTA 59.787 38.462 0.00 0.00 0.00 2.59
2457 4049 4.406326 AGCACATAATTGGAATGGCAATCA 59.594 37.500 4.73 0.00 0.00 2.57
2539 4131 1.611977 TCTTCCTACACCTGTCACACG 59.388 52.381 0.00 0.00 0.00 4.49
2791 4468 2.037847 ACTGGGCCCAATCCTTGC 59.962 61.111 28.29 0.00 0.00 4.01
2979 4667 4.543689 AGACCATGCAATCAAGATTCCAT 58.456 39.130 0.00 0.00 29.68 3.41
2994 4682 4.759782 ACGAAATGACTCCTTAGACCATG 58.240 43.478 0.00 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.