Multiple sequence alignment - TraesCS2B01G198900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G198900 chr2B 100.000 3407 0 0 1 3407 176415909 176412503 0.000000e+00 6292.0
1 TraesCS2B01G198900 chr2D 90.253 1939 80 44 661 2555 123811835 123809962 0.000000e+00 2433.0
2 TraesCS2B01G198900 chr2D 89.384 292 14 8 2924 3214 123809883 123809608 5.410000e-93 351.0
3 TraesCS2B01G198900 chr2A 91.681 1791 79 22 775 2549 129105914 129104178 0.000000e+00 2418.0
4 TraesCS2B01G198900 chr2A 84.265 483 39 16 2930 3407 129104082 129103632 1.450000e-118 436.0
5 TraesCS2B01G198900 chr2A 87.468 391 32 9 752 1142 129873574 129873947 5.220000e-118 435.0
6 TraesCS2B01G198900 chr1D 89.967 608 57 4 1 606 18981877 18982482 0.000000e+00 782.0
7 TraesCS2B01G198900 chr1D 84.746 59 8 1 2794 2852 233902824 233902767 1.320000e-04 58.4
8 TraesCS2B01G198900 chr7D 84.783 598 90 1 11 607 91124628 91124031 1.750000e-167 599.0
9 TraesCS2B01G198900 chr7D 74.627 268 53 11 2672 2927 101091530 101091266 1.670000e-18 104.0
10 TraesCS2B01G198900 chr7B 84.804 612 62 12 1 608 19362644 19363228 1.360000e-163 586.0
11 TraesCS2B01G198900 chr7B 76.562 256 53 7 2674 2927 57613087 57612837 2.130000e-27 134.0
12 TraesCS2B01G198900 chr7B 97.297 37 1 0 622 658 551892956 551892992 2.840000e-06 63.9
13 TraesCS2B01G198900 chr6D 85.657 251 32 3 22 268 414695930 414695680 9.380000e-66 261.0
14 TraesCS2B01G198900 chr6D 77.491 271 57 4 265 533 414645672 414645404 3.520000e-35 159.0
15 TraesCS2B01G198900 chr5A 80.952 252 42 4 2674 2923 330196273 330196026 9.650000e-46 195.0
16 TraesCS2B01G198900 chr1A 80.709 254 44 5 2669 2920 380311853 380312103 3.470000e-45 193.0
17 TraesCS2B01G198900 chr6B 81.481 162 27 3 2754 2913 625378977 625379137 2.760000e-26 130.0
18 TraesCS2B01G198900 chr7A 74.517 259 60 6 2672 2927 103158942 103158687 1.290000e-19 108.0
19 TraesCS2B01G198900 chr4B 95.238 42 2 0 2754 2795 96274852 96274811 2.190000e-07 67.6
20 TraesCS2B01G198900 chr4B 90.244 41 4 0 2822 2862 566212343 566212383 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G198900 chr2B 176412503 176415909 3406 True 6292 6292 100.0000 1 3407 1 chr2B.!!$R1 3406
1 TraesCS2B01G198900 chr2D 123809608 123811835 2227 True 1392 2433 89.8185 661 3214 2 chr2D.!!$R1 2553
2 TraesCS2B01G198900 chr2A 129103632 129105914 2282 True 1427 2418 87.9730 775 3407 2 chr2A.!!$R1 2632
3 TraesCS2B01G198900 chr1D 18981877 18982482 605 False 782 782 89.9670 1 606 1 chr1D.!!$F1 605
4 TraesCS2B01G198900 chr7D 91124031 91124628 597 True 599 599 84.7830 11 607 1 chr7D.!!$R1 596
5 TraesCS2B01G198900 chr7B 19362644 19363228 584 False 586 586 84.8040 1 608 1 chr7B.!!$F1 607

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
611 616 0.034198 TTGGAACACGCCATCTTCGA 59.966 50.0 0.00 0.0 39.29 3.71 F
612 617 0.034198 TGGAACACGCCATCTTCGAA 59.966 50.0 0.00 0.0 31.66 3.71 F
1287 1300 0.246635 ATCCGCGCTGTTCTTGTACT 59.753 50.0 5.56 0.0 0.00 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1879 1897 0.110238 CCAACTGCAAACCATCGACG 60.110 55.0 0.0 0.0 0.0 5.12 R
2310 2368 0.949105 CCCAGAACACCACGTACTGC 60.949 60.0 0.0 0.0 0.0 4.40 R
2746 2808 0.036732 AGAAACTGCCATCCTCGCAA 59.963 50.0 0.0 0.0 35.4 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 109 2.507102 CACTTGCGGCGATCTCGT 60.507 61.111 12.98 0.00 42.22 4.18
126 127 1.386772 TCCCCCAAACTCCACCAGT 60.387 57.895 0.00 0.00 36.64 4.00
182 183 2.202676 CTCTCAGAAGTCGCCGCC 60.203 66.667 0.00 0.00 0.00 6.13
210 211 0.475632 TCATGGGTGGGGAAGTGAGT 60.476 55.000 0.00 0.00 0.00 3.41
216 217 1.420138 GGTGGGGAAGTGAGTGAGAAA 59.580 52.381 0.00 0.00 0.00 2.52
244 246 4.348495 TCCACTCCCACCCCCTCC 62.348 72.222 0.00 0.00 0.00 4.30
263 265 1.202604 CCCGTACTTATTGCCGTCCAT 60.203 52.381 0.00 0.00 0.00 3.41
297 299 2.746277 GTGCCGCCCGAGATTTGT 60.746 61.111 0.00 0.00 0.00 2.83
323 325 1.502231 GTATGGCTAGTCGCACCATG 58.498 55.000 8.60 0.00 43.93 3.66
383 385 3.170791 AGAGTCGAGATTCGTACCGTA 57.829 47.619 0.00 0.00 41.35 4.02
608 613 3.412722 TGTTGGAACACGCCATCTT 57.587 47.368 0.00 0.00 39.29 2.40
609 614 1.234821 TGTTGGAACACGCCATCTTC 58.765 50.000 0.00 0.00 39.29 2.87
610 615 0.165944 GTTGGAACACGCCATCTTCG 59.834 55.000 0.00 0.00 39.29 3.79
611 616 0.034198 TTGGAACACGCCATCTTCGA 59.966 50.000 0.00 0.00 39.29 3.71
612 617 0.034198 TGGAACACGCCATCTTCGAA 59.966 50.000 0.00 0.00 31.66 3.71
613 618 1.338674 TGGAACACGCCATCTTCGAAT 60.339 47.619 0.00 0.00 31.66 3.34
614 619 1.737793 GGAACACGCCATCTTCGAATT 59.262 47.619 0.00 0.00 0.00 2.17
615 620 2.161609 GGAACACGCCATCTTCGAATTT 59.838 45.455 0.00 0.00 0.00 1.82
616 621 2.900122 ACACGCCATCTTCGAATTTG 57.100 45.000 0.00 0.00 0.00 2.32
617 622 2.151202 ACACGCCATCTTCGAATTTGT 58.849 42.857 0.00 0.00 0.00 2.83
618 623 2.159627 ACACGCCATCTTCGAATTTGTC 59.840 45.455 0.00 0.00 0.00 3.18
619 624 1.737793 ACGCCATCTTCGAATTTGTCC 59.262 47.619 0.00 0.00 0.00 4.02
620 625 1.267532 CGCCATCTTCGAATTTGTCCG 60.268 52.381 0.00 1.52 0.00 4.79
621 626 2.006888 GCCATCTTCGAATTTGTCCGA 58.993 47.619 0.00 0.00 0.00 4.55
622 627 2.418628 GCCATCTTCGAATTTGTCCGAA 59.581 45.455 0.00 0.00 41.71 4.30
629 634 4.720649 TCGAATTTGTCCGAAGATCTCT 57.279 40.909 0.00 0.00 0.00 3.10
630 635 4.673441 TCGAATTTGTCCGAAGATCTCTC 58.327 43.478 0.00 0.00 0.00 3.20
631 636 4.157840 TCGAATTTGTCCGAAGATCTCTCA 59.842 41.667 0.00 0.00 0.00 3.27
632 637 4.502282 CGAATTTGTCCGAAGATCTCTCAG 59.498 45.833 0.00 0.00 0.00 3.35
633 638 5.413309 AATTTGTCCGAAGATCTCTCAGT 57.587 39.130 0.00 0.00 0.00 3.41
634 639 4.873746 TTTGTCCGAAGATCTCTCAGTT 57.126 40.909 0.00 0.00 0.00 3.16
635 640 5.977489 TTTGTCCGAAGATCTCTCAGTTA 57.023 39.130 0.00 0.00 0.00 2.24
636 641 4.966965 TGTCCGAAGATCTCTCAGTTAC 57.033 45.455 0.00 0.00 0.00 2.50
637 642 4.332828 TGTCCGAAGATCTCTCAGTTACA 58.667 43.478 0.00 0.00 0.00 2.41
638 643 4.950475 TGTCCGAAGATCTCTCAGTTACAT 59.050 41.667 0.00 0.00 0.00 2.29
639 644 6.120220 TGTCCGAAGATCTCTCAGTTACATA 58.880 40.000 0.00 0.00 0.00 2.29
640 645 6.773200 TGTCCGAAGATCTCTCAGTTACATAT 59.227 38.462 0.00 0.00 0.00 1.78
641 646 7.081349 GTCCGAAGATCTCTCAGTTACATATG 58.919 42.308 0.00 0.00 0.00 1.78
642 647 6.773200 TCCGAAGATCTCTCAGTTACATATGT 59.227 38.462 13.93 13.93 0.00 2.29
643 648 6.860539 CCGAAGATCTCTCAGTTACATATGTG 59.139 42.308 18.81 1.55 0.00 3.21
644 649 7.255277 CCGAAGATCTCTCAGTTACATATGTGA 60.255 40.741 18.81 7.50 0.00 3.58
645 650 8.131731 CGAAGATCTCTCAGTTACATATGTGAA 58.868 37.037 18.81 6.19 0.00 3.18
646 651 9.243637 GAAGATCTCTCAGTTACATATGTGAAC 57.756 37.037 18.81 16.43 0.00 3.18
647 652 8.532186 AGATCTCTCAGTTACATATGTGAACT 57.468 34.615 18.81 18.10 33.71 3.01
648 653 9.634021 AGATCTCTCAGTTACATATGTGAACTA 57.366 33.333 18.81 8.65 32.22 2.24
651 656 9.634021 TCTCTCAGTTACATATGTGAACTATCT 57.366 33.333 18.81 0.41 32.22 1.98
696 701 8.103948 AGATAGCAATGCTTTTTAGCGAATAT 57.896 30.769 14.85 0.00 40.44 1.28
697 702 9.219603 AGATAGCAATGCTTTTTAGCGAATATA 57.780 29.630 14.85 0.00 40.44 0.86
710 715 8.500837 TTTAGCGAATATAAAATGAAATGCCG 57.499 30.769 0.00 0.00 0.00 5.69
756 761 1.804748 GACGATCCAAACTTGTGGGTC 59.195 52.381 0.00 0.00 44.25 4.46
761 766 1.418264 TCCAAACTTGTGGGTCGATCA 59.582 47.619 0.00 0.00 39.34 2.92
770 775 2.280628 GTGGGTCGATCAGAAACATCC 58.719 52.381 0.00 0.00 0.00 3.51
772 777 1.571919 GGTCGATCAGAAACATCCGG 58.428 55.000 0.00 0.00 0.00 5.14
791 796 0.377203 GTTTTAATCGGGCGGCTCAG 59.623 55.000 9.56 0.70 0.00 3.35
795 800 2.306255 TAATCGGGCGGCTCAGGTTC 62.306 60.000 9.56 0.00 0.00 3.62
804 809 2.970974 GCTCAGGTTCGTTGCAGGC 61.971 63.158 0.00 0.00 0.00 4.85
883 888 0.461961 CACCGGTCTCTTCTCCATCC 59.538 60.000 2.59 0.00 0.00 3.51
1206 1211 2.032071 GCCGCAACCACTGGTACT 59.968 61.111 0.00 0.00 33.12 2.73
1222 1227 2.287668 GGTACTCCCATTCGATCACTCG 60.288 54.545 0.00 0.00 46.41 4.18
1226 1231 0.598680 CCCATTCGATCACTCGGCTC 60.599 60.000 0.00 0.00 45.10 4.70
1287 1300 0.246635 ATCCGCGCTGTTCTTGTACT 59.753 50.000 5.56 0.00 0.00 2.73
1305 1318 5.775686 TGTACTTGAAGCTTTAGACGCTTA 58.224 37.500 14.35 0.00 46.85 3.09
1306 1319 5.632347 TGTACTTGAAGCTTTAGACGCTTAC 59.368 40.000 14.35 7.85 46.85 2.34
1307 1320 3.673809 ACTTGAAGCTTTAGACGCTTACG 59.326 43.478 14.35 0.00 46.85 3.18
1308 1321 1.990563 TGAAGCTTTAGACGCTTACGC 59.009 47.619 0.00 0.00 46.85 4.42
1309 1322 2.260481 GAAGCTTTAGACGCTTACGCT 58.740 47.619 0.00 0.00 46.85 5.07
1310 1323 2.365408 AGCTTTAGACGCTTACGCTT 57.635 45.000 0.00 0.00 45.53 4.68
1321 1334 1.766143 CTTACGCTTCGGATGCTGCC 61.766 60.000 13.16 0.00 0.00 4.85
1325 1338 3.570638 CTTCGGATGCTGCCTGCG 61.571 66.667 12.16 12.16 46.63 5.18
1334 1347 2.517450 GCTGCCTGCGTCGATGTAC 61.517 63.158 6.48 0.00 0.00 2.90
1602 1615 3.452627 GGTGAGATCAGTGGTTCATACCT 59.547 47.826 0.00 0.00 45.27 3.08
1608 1621 4.819105 TCAGTGGTTCATACCTACAAGG 57.181 45.455 0.00 0.00 45.27 3.61
1609 1622 3.055385 TCAGTGGTTCATACCTACAAGGC 60.055 47.826 0.00 0.00 45.27 4.35
1610 1623 3.055094 CAGTGGTTCATACCTACAAGGCT 60.055 47.826 0.00 0.00 45.27 4.58
1611 1624 4.161565 CAGTGGTTCATACCTACAAGGCTA 59.838 45.833 0.00 0.00 45.27 3.93
1612 1625 4.161754 AGTGGTTCATACCTACAAGGCTAC 59.838 45.833 0.00 0.00 45.27 3.58
1613 1626 4.081309 GTGGTTCATACCTACAAGGCTACA 60.081 45.833 0.00 0.00 45.27 2.74
1614 1627 4.532916 TGGTTCATACCTACAAGGCTACAA 59.467 41.667 0.00 0.00 45.27 2.41
1615 1628 5.116882 GGTTCATACCTACAAGGCTACAAG 58.883 45.833 0.00 0.00 39.63 3.16
1616 1629 4.402056 TCATACCTACAAGGCTACAAGC 57.598 45.455 0.00 0.00 39.63 4.01
1617 1630 3.772572 TCATACCTACAAGGCTACAAGCA 59.227 43.478 0.78 0.00 44.75 3.91
1702 1715 5.661458 GTGCAAGCTATGAGTAACTAGGAA 58.339 41.667 0.00 0.00 0.00 3.36
1756 1769 3.896648 CATATTTGCATACCACGGGAC 57.103 47.619 0.00 0.00 0.00 4.46
1757 1770 3.210227 CATATTTGCATACCACGGGACA 58.790 45.455 0.00 0.00 0.00 4.02
1758 1771 2.208132 ATTTGCATACCACGGGACAA 57.792 45.000 0.00 0.00 0.00 3.18
1759 1772 1.529226 TTTGCATACCACGGGACAAG 58.471 50.000 0.00 0.00 0.00 3.16
1760 1773 0.322098 TTGCATACCACGGGACAAGG 60.322 55.000 0.00 0.00 0.00 3.61
1761 1774 1.298667 GCATACCACGGGACAAGGT 59.701 57.895 0.00 0.00 38.66 3.50
1762 1775 0.538118 GCATACCACGGGACAAGGTA 59.462 55.000 0.00 0.00 40.72 3.08
1763 1776 1.472728 GCATACCACGGGACAAGGTAG 60.473 57.143 0.00 0.00 40.00 3.18
1764 1777 1.829222 CATACCACGGGACAAGGTAGT 59.171 52.381 0.00 0.00 40.00 2.73
1798 1811 5.594725 TGGTGGTGTGATTTTAGCAGTTTTA 59.405 36.000 0.00 0.00 0.00 1.52
1828 1841 2.475155 TCTTCACTCTCCAGCCATCAT 58.525 47.619 0.00 0.00 0.00 2.45
1870 1884 6.770303 TCAATGTACTTTGGTGTCATTCTGAA 59.230 34.615 18.40 0.00 33.12 3.02
1879 1897 2.029918 GTGTCATTCTGAACCTTTGGGC 60.030 50.000 0.00 0.00 35.63 5.36
1903 1921 0.681175 ATGGTTTGCAGTTGGAAGGC 59.319 50.000 0.00 0.00 0.00 4.35
1948 1966 3.133183 CCTACTACTTCTGGGCCTTCTTC 59.867 52.174 4.53 0.00 0.00 2.87
2013 2034 1.202879 TGTCCAATGCCGTTTCTTCCT 60.203 47.619 0.00 0.00 0.00 3.36
2052 2104 3.503363 TGCTGGTTTACTTGCTGAGAATG 59.497 43.478 0.00 0.00 0.00 2.67
2054 2106 2.483877 TGGTTTACTTGCTGAGAATGCG 59.516 45.455 0.00 0.00 0.00 4.73
2092 2144 4.580580 CCTTCTTGACCTAGTTTGCTGTTT 59.419 41.667 0.00 0.00 0.00 2.83
2093 2145 5.278022 CCTTCTTGACCTAGTTTGCTGTTTC 60.278 44.000 0.00 0.00 0.00 2.78
2096 2148 6.588204 TCTTGACCTAGTTTGCTGTTTCTTA 58.412 36.000 0.00 0.00 0.00 2.10
2158 2210 4.693566 TCACTTCATAGCCCAAAAACTACG 59.306 41.667 0.00 0.00 0.00 3.51
2166 2218 4.923893 AGCCCAAAAACTACGTAACAAAC 58.076 39.130 0.00 0.00 0.00 2.93
2167 2219 4.043750 GCCCAAAAACTACGTAACAAACC 58.956 43.478 0.00 0.00 0.00 3.27
2168 2220 4.439837 GCCCAAAAACTACGTAACAAACCA 60.440 41.667 0.00 0.00 0.00 3.67
2169 2221 5.736777 GCCCAAAAACTACGTAACAAACCAT 60.737 40.000 0.00 0.00 0.00 3.55
2172 2224 7.043258 CCCAAAAACTACGTAACAAACCATTTC 60.043 37.037 0.00 0.00 0.00 2.17
2173 2225 7.703197 CCAAAAACTACGTAACAAACCATTTCT 59.297 33.333 0.00 0.00 0.00 2.52
2174 2226 8.528295 CAAAAACTACGTAACAAACCATTTCTG 58.472 33.333 0.00 0.00 0.00 3.02
2175 2227 5.352643 ACTACGTAACAAACCATTTCTGC 57.647 39.130 0.00 0.00 0.00 4.26
2179 2237 4.084223 ACGTAACAAACCATTTCTGCTACG 60.084 41.667 0.00 3.50 36.56 3.51
2189 2247 6.273825 ACCATTTCTGCTACGTATCAACTAG 58.726 40.000 0.00 0.00 0.00 2.57
2337 2395 2.645802 GTGGTGTTCTGGGTGTACAAA 58.354 47.619 0.00 0.00 0.00 2.83
2372 2430 3.319198 GGTGCTCCCGGTCTGGAA 61.319 66.667 0.00 0.00 42.00 3.53
2445 2503 6.092533 CACATGCAAGATACACAACATACAGA 59.907 38.462 0.00 0.00 0.00 3.41
2480 2540 5.935789 GGGCACAAGTTACTCTGTGTATAAA 59.064 40.000 20.13 0.00 35.00 1.40
2544 2604 9.189723 CAAAAGGTTCATCTGATTCTTTTTCTC 57.810 33.333 13.54 0.00 35.99 2.87
2550 2610 7.678947 TCATCTGATTCTTTTTCTCCTGAAC 57.321 36.000 0.00 0.00 31.02 3.18
2555 2615 6.000219 TGATTCTTTTTCTCCTGAACTCCAG 59.000 40.000 0.00 0.00 42.55 3.86
2556 2616 5.630415 TTCTTTTTCTCCTGAACTCCAGA 57.370 39.130 0.00 0.00 45.78 3.86
2559 2619 6.423182 TCTTTTTCTCCTGAACTCCAGAAAA 58.577 36.000 2.33 2.33 45.78 2.29
2560 2620 6.889722 TCTTTTTCTCCTGAACTCCAGAAAAA 59.110 34.615 14.50 14.50 45.75 1.94
2561 2621 6.699575 TTTTCTCCTGAACTCCAGAAAAAG 57.300 37.500 3.75 0.00 45.78 2.27
2562 2622 5.373812 TTCTCCTGAACTCCAGAAAAAGT 57.626 39.130 0.00 0.00 45.78 2.66
2563 2623 5.373812 TCTCCTGAACTCCAGAAAAAGTT 57.626 39.130 0.00 0.00 45.78 2.66
2570 2630 5.444663 AACTCCAGAAAAAGTTCATCTGC 57.555 39.130 10.81 0.00 39.36 4.26
2571 2631 4.723309 ACTCCAGAAAAAGTTCATCTGCT 58.277 39.130 10.81 0.00 39.36 4.24
2572 2632 5.869579 ACTCCAGAAAAAGTTCATCTGCTA 58.130 37.500 10.81 3.22 39.36 3.49
2573 2633 6.299141 ACTCCAGAAAAAGTTCATCTGCTAA 58.701 36.000 10.81 1.45 39.36 3.09
2574 2634 6.944862 ACTCCAGAAAAAGTTCATCTGCTAAT 59.055 34.615 10.81 0.00 39.36 1.73
2575 2635 7.094463 ACTCCAGAAAAAGTTCATCTGCTAATG 60.094 37.037 10.81 0.00 39.36 1.90
2576 2636 6.716628 TCCAGAAAAAGTTCATCTGCTAATGT 59.283 34.615 10.81 0.00 39.36 2.71
2577 2637 7.025963 CCAGAAAAAGTTCATCTGCTAATGTC 58.974 38.462 10.81 0.00 39.36 3.06
2578 2638 6.740002 CAGAAAAAGTTCATCTGCTAATGTCG 59.260 38.462 5.28 0.00 36.09 4.35
2579 2639 4.606457 AAAGTTCATCTGCTAATGTCGC 57.394 40.909 0.00 0.00 0.00 5.19
2580 2640 3.251479 AGTTCATCTGCTAATGTCGCA 57.749 42.857 0.00 0.00 35.80 5.10
2581 2641 8.558063 GAAAAAGTTCATCTGCTAATGTCGCAG 61.558 40.741 5.71 5.71 43.16 5.18
2598 2658 6.939622 TGTCGCAGATATCCTTGATGATAAT 58.060 36.000 0.00 0.00 40.67 1.28
2603 2663 8.509690 CGCAGATATCCTTGATGATAATTGTTT 58.490 33.333 0.00 0.00 31.34 2.83
2610 2670 7.356680 TCCTTGATGATAATTGTTTCCCTGAT 58.643 34.615 0.00 0.00 0.00 2.90
2612 2672 8.571336 CCTTGATGATAATTGTTTCCCTGATAC 58.429 37.037 0.00 0.00 0.00 2.24
2628 2688 2.070783 GATACGGTCGCCTCAACAAAA 58.929 47.619 0.00 0.00 0.00 2.44
2629 2689 1.950828 TACGGTCGCCTCAACAAAAA 58.049 45.000 0.00 0.00 0.00 1.94
2630 2690 0.379316 ACGGTCGCCTCAACAAAAAC 59.621 50.000 0.00 0.00 0.00 2.43
2631 2691 0.661020 CGGTCGCCTCAACAAAAACT 59.339 50.000 0.00 0.00 0.00 2.66
2670 2732 7.914537 AAGAAAATGACTCGTTGAAATGAAC 57.085 32.000 0.00 0.00 0.00 3.18
2672 2734 7.479980 AGAAAATGACTCGTTGAAATGAACAA 58.520 30.769 0.00 0.00 0.00 2.83
2673 2735 7.645340 AGAAAATGACTCGTTGAAATGAACAAG 59.355 33.333 0.00 0.00 0.00 3.16
2674 2736 4.811555 TGACTCGTTGAAATGAACAAGG 57.188 40.909 0.00 0.00 35.40 3.61
2675 2737 4.447290 TGACTCGTTGAAATGAACAAGGA 58.553 39.130 0.00 0.00 38.95 3.36
2676 2738 5.063204 TGACTCGTTGAAATGAACAAGGAT 58.937 37.500 0.00 0.00 39.92 3.24
2677 2739 5.530915 TGACTCGTTGAAATGAACAAGGATT 59.469 36.000 0.00 0.00 39.92 3.01
2678 2740 6.039270 TGACTCGTTGAAATGAACAAGGATTT 59.961 34.615 0.00 0.00 39.92 2.17
2679 2741 6.805713 ACTCGTTGAAATGAACAAGGATTTT 58.194 32.000 0.00 0.00 39.92 1.82
2680 2742 6.697019 ACTCGTTGAAATGAACAAGGATTTTG 59.303 34.615 0.00 0.00 39.92 2.44
2681 2743 5.461737 TCGTTGAAATGAACAAGGATTTTGC 59.538 36.000 0.00 0.00 37.27 3.68
2682 2744 5.463061 CGTTGAAATGAACAAGGATTTTGCT 59.537 36.000 0.00 0.00 35.89 3.91
2683 2745 6.640499 CGTTGAAATGAACAAGGATTTTGCTA 59.360 34.615 0.00 0.00 35.89 3.49
2684 2746 7.358352 CGTTGAAATGAACAAGGATTTTGCTAC 60.358 37.037 0.00 0.00 35.89 3.58
2685 2747 7.048629 TGAAATGAACAAGGATTTTGCTACA 57.951 32.000 0.00 0.00 0.00 2.74
2686 2748 7.495901 TGAAATGAACAAGGATTTTGCTACAA 58.504 30.769 0.00 0.00 0.00 2.41
2687 2749 7.984050 TGAAATGAACAAGGATTTTGCTACAAA 59.016 29.630 0.00 0.00 0.00 2.83
2688 2750 8.907222 AAATGAACAAGGATTTTGCTACAAAT 57.093 26.923 0.00 0.00 0.00 2.32
2689 2751 8.538409 AATGAACAAGGATTTTGCTACAAATC 57.462 30.769 7.62 7.62 35.30 2.17
2690 2752 6.148948 TGAACAAGGATTTTGCTACAAATCG 58.851 36.000 9.21 0.00 36.53 3.34
2691 2753 5.957842 ACAAGGATTTTGCTACAAATCGA 57.042 34.783 0.00 0.00 36.53 3.59
2692 2754 6.325919 ACAAGGATTTTGCTACAAATCGAA 57.674 33.333 0.00 0.00 36.53 3.71
2693 2755 6.149633 ACAAGGATTTTGCTACAAATCGAAC 58.850 36.000 0.00 0.09 36.53 3.95
2694 2756 4.969816 AGGATTTTGCTACAAATCGAACG 58.030 39.130 0.00 0.00 36.53 3.95
2695 2757 4.454504 AGGATTTTGCTACAAATCGAACGT 59.545 37.500 0.00 0.00 36.53 3.99
2696 2758 4.553429 GGATTTTGCTACAAATCGAACGTG 59.447 41.667 0.00 0.00 36.53 4.49
2697 2759 4.797693 TTTTGCTACAAATCGAACGTGA 57.202 36.364 0.00 0.00 0.00 4.35
2698 2760 4.383774 TTTGCTACAAATCGAACGTGAG 57.616 40.909 0.00 0.00 0.00 3.51
2699 2761 3.291809 TGCTACAAATCGAACGTGAGA 57.708 42.857 0.00 0.00 0.00 3.27
2700 2762 3.845178 TGCTACAAATCGAACGTGAGAT 58.155 40.909 0.00 0.00 0.00 2.75
2701 2763 4.242475 TGCTACAAATCGAACGTGAGATT 58.758 39.130 11.54 11.54 38.58 2.40
2702 2764 4.688879 TGCTACAAATCGAACGTGAGATTT 59.311 37.500 19.52 19.52 44.91 2.17
2703 2765 5.178623 TGCTACAAATCGAACGTGAGATTTT 59.821 36.000 21.51 16.64 42.41 1.82
2704 2766 6.077838 GCTACAAATCGAACGTGAGATTTTT 58.922 36.000 21.51 18.88 42.41 1.94
2724 2786 5.610235 TTTTAGCTTGGCAAATCAAATGC 57.390 34.783 0.00 0.00 43.08 3.56
2725 2787 4.540359 TTAGCTTGGCAAATCAAATGCT 57.460 36.364 11.77 11.77 43.34 3.79
2726 2788 3.412237 AGCTTGGCAAATCAAATGCTT 57.588 38.095 0.00 0.00 43.34 3.91
2727 2789 3.746940 AGCTTGGCAAATCAAATGCTTT 58.253 36.364 0.00 0.00 43.34 3.51
2728 2790 3.749609 AGCTTGGCAAATCAAATGCTTTC 59.250 39.130 0.00 0.00 43.34 2.62
2729 2791 3.749609 GCTTGGCAAATCAAATGCTTTCT 59.250 39.130 0.00 0.00 43.34 2.52
2730 2792 4.931002 GCTTGGCAAATCAAATGCTTTCTA 59.069 37.500 0.00 0.00 43.34 2.10
2731 2793 5.063060 GCTTGGCAAATCAAATGCTTTCTAG 59.937 40.000 0.00 0.00 43.34 2.43
2732 2794 5.075858 TGGCAAATCAAATGCTTTCTAGG 57.924 39.130 0.00 0.00 43.34 3.02
2733 2795 4.081531 TGGCAAATCAAATGCTTTCTAGGG 60.082 41.667 0.00 0.00 43.34 3.53
2734 2796 3.867493 GCAAATCAAATGCTTTCTAGGGC 59.133 43.478 0.00 0.00 40.64 5.19
2735 2797 4.621274 GCAAATCAAATGCTTTCTAGGGCA 60.621 41.667 8.02 8.02 40.64 5.36
2736 2798 5.481105 CAAATCAAATGCTTTCTAGGGCAA 58.519 37.500 9.27 0.00 41.90 4.52
2737 2799 4.996788 ATCAAATGCTTTCTAGGGCAAG 57.003 40.909 9.27 2.51 41.90 4.01
2738 2800 3.766545 TCAAATGCTTTCTAGGGCAAGT 58.233 40.909 9.27 0.66 41.90 3.16
2739 2801 4.151883 TCAAATGCTTTCTAGGGCAAGTT 58.848 39.130 9.27 5.43 41.90 2.66
2740 2802 5.321102 TCAAATGCTTTCTAGGGCAAGTTA 58.679 37.500 9.27 0.00 41.90 2.24
2741 2803 5.951747 TCAAATGCTTTCTAGGGCAAGTTAT 59.048 36.000 9.27 0.00 41.90 1.89
2742 2804 7.116075 TCAAATGCTTTCTAGGGCAAGTTATA 58.884 34.615 9.27 0.19 41.90 0.98
2743 2805 7.779798 TCAAATGCTTTCTAGGGCAAGTTATAT 59.220 33.333 9.27 0.00 41.90 0.86
2744 2806 8.416329 CAAATGCTTTCTAGGGCAAGTTATATT 58.584 33.333 9.27 0.00 41.90 1.28
2745 2807 6.942532 TGCTTTCTAGGGCAAGTTATATTG 57.057 37.500 4.07 0.00 35.40 1.90
2746 2808 6.423182 TGCTTTCTAGGGCAAGTTATATTGT 58.577 36.000 4.07 0.00 35.40 2.71
2747 2809 6.889722 TGCTTTCTAGGGCAAGTTATATTGTT 59.110 34.615 4.07 0.00 35.40 2.83
2748 2810 7.148086 TGCTTTCTAGGGCAAGTTATATTGTTG 60.148 37.037 4.07 0.00 35.40 3.33
2749 2811 6.693315 TTCTAGGGCAAGTTATATTGTTGC 57.307 37.500 7.50 7.50 44.79 4.17
2750 2812 4.814234 TCTAGGGCAAGTTATATTGTTGCG 59.186 41.667 9.14 0.00 46.16 4.85
2751 2813 3.616219 AGGGCAAGTTATATTGTTGCGA 58.384 40.909 9.14 0.00 46.16 5.10
2752 2814 3.627577 AGGGCAAGTTATATTGTTGCGAG 59.372 43.478 9.14 0.00 46.16 5.03
2753 2815 3.243068 GGGCAAGTTATATTGTTGCGAGG 60.243 47.826 9.14 0.00 46.16 4.63
2754 2816 3.625764 GGCAAGTTATATTGTTGCGAGGA 59.374 43.478 9.14 0.00 46.16 3.71
2755 2817 4.275936 GGCAAGTTATATTGTTGCGAGGAT 59.724 41.667 9.14 0.00 46.16 3.24
2756 2818 5.207768 GCAAGTTATATTGTTGCGAGGATG 58.792 41.667 0.00 0.00 37.44 3.51
2757 2819 5.751680 CAAGTTATATTGTTGCGAGGATGG 58.248 41.667 0.00 0.00 0.00 3.51
2758 2820 3.815401 AGTTATATTGTTGCGAGGATGGC 59.185 43.478 0.00 0.00 41.71 4.40
2765 2827 4.625800 GCGAGGATGGCAGTTTCT 57.374 55.556 0.00 0.00 40.68 2.52
2766 2828 2.859992 GCGAGGATGGCAGTTTCTT 58.140 52.632 0.00 0.00 40.68 2.52
2767 2829 1.168714 GCGAGGATGGCAGTTTCTTT 58.831 50.000 0.00 0.00 40.68 2.52
2768 2830 1.541588 GCGAGGATGGCAGTTTCTTTT 59.458 47.619 0.00 0.00 40.68 2.27
2769 2831 2.747446 GCGAGGATGGCAGTTTCTTTTA 59.253 45.455 0.00 0.00 40.68 1.52
2770 2832 3.181506 GCGAGGATGGCAGTTTCTTTTAG 60.182 47.826 0.00 0.00 40.68 1.85
2771 2833 3.181506 CGAGGATGGCAGTTTCTTTTAGC 60.182 47.826 0.00 0.00 0.00 3.09
2772 2834 3.758554 GAGGATGGCAGTTTCTTTTAGCA 59.241 43.478 0.00 0.00 0.00 3.49
2773 2835 4.151883 AGGATGGCAGTTTCTTTTAGCAA 58.848 39.130 0.00 0.00 0.00 3.91
2774 2836 4.219288 AGGATGGCAGTTTCTTTTAGCAAG 59.781 41.667 0.00 0.00 0.00 4.01
2775 2837 3.369546 TGGCAGTTTCTTTTAGCAAGC 57.630 42.857 0.00 0.00 0.00 4.01
2776 2838 2.692557 TGGCAGTTTCTTTTAGCAAGCA 59.307 40.909 0.00 0.00 0.00 3.91
2777 2839 3.321682 TGGCAGTTTCTTTTAGCAAGCAT 59.678 39.130 0.00 0.00 0.00 3.79
2778 2840 3.676646 GGCAGTTTCTTTTAGCAAGCATG 59.323 43.478 0.00 0.00 0.00 4.06
2779 2841 4.549458 GCAGTTTCTTTTAGCAAGCATGA 58.451 39.130 0.00 0.00 0.00 3.07
2780 2842 4.383948 GCAGTTTCTTTTAGCAAGCATGAC 59.616 41.667 0.00 0.00 0.00 3.06
2781 2843 5.522456 CAGTTTCTTTTAGCAAGCATGACA 58.478 37.500 0.00 0.00 0.00 3.58
2782 2844 5.978919 CAGTTTCTTTTAGCAAGCATGACAA 59.021 36.000 0.00 0.00 0.00 3.18
2783 2845 6.476380 CAGTTTCTTTTAGCAAGCATGACAAA 59.524 34.615 0.00 0.00 0.00 2.83
2784 2846 7.170320 CAGTTTCTTTTAGCAAGCATGACAAAT 59.830 33.333 0.00 0.00 0.00 2.32
2785 2847 7.383300 AGTTTCTTTTAGCAAGCATGACAAATC 59.617 33.333 0.00 0.00 0.00 2.17
2786 2848 5.713025 TCTTTTAGCAAGCATGACAAATCC 58.287 37.500 0.00 0.00 0.00 3.01
2787 2849 5.477984 TCTTTTAGCAAGCATGACAAATCCT 59.522 36.000 0.00 0.00 0.00 3.24
2788 2850 5.726980 TTTAGCAAGCATGACAAATCCTT 57.273 34.783 0.00 0.00 0.00 3.36
2789 2851 3.587797 AGCAAGCATGACAAATCCTTG 57.412 42.857 0.00 0.00 38.61 3.61
2791 2853 2.613691 CAAGCATGACAAATCCTTGCC 58.386 47.619 0.00 0.00 35.84 4.52
2792 2854 1.927487 AGCATGACAAATCCTTGCCA 58.073 45.000 0.00 0.00 35.84 4.92
2793 2855 2.463752 AGCATGACAAATCCTTGCCAT 58.536 42.857 0.00 0.00 36.19 4.40
2795 2857 3.880047 CATGACAAATCCTTGCCATGT 57.120 42.857 6.12 0.00 44.17 3.21
2796 2858 4.196626 CATGACAAATCCTTGCCATGTT 57.803 40.909 6.12 0.00 44.17 2.71
2797 2859 3.940209 TGACAAATCCTTGCCATGTTC 57.060 42.857 0.00 0.00 35.84 3.18
2798 2860 3.229293 TGACAAATCCTTGCCATGTTCA 58.771 40.909 0.00 0.00 35.84 3.18
2799 2861 3.640498 TGACAAATCCTTGCCATGTTCAA 59.360 39.130 0.00 0.00 35.84 2.69
2800 2862 4.283978 TGACAAATCCTTGCCATGTTCAAT 59.716 37.500 0.00 0.00 35.84 2.57
2801 2863 5.221682 TGACAAATCCTTGCCATGTTCAATT 60.222 36.000 0.00 0.00 35.84 2.32
2802 2864 5.623169 ACAAATCCTTGCCATGTTCAATTT 58.377 33.333 0.00 0.00 35.84 1.82
2803 2865 6.063404 ACAAATCCTTGCCATGTTCAATTTT 58.937 32.000 0.00 0.00 35.84 1.82
2804 2866 6.546772 ACAAATCCTTGCCATGTTCAATTTTT 59.453 30.769 0.00 0.00 35.84 1.94
2823 2885 5.596836 TTTTTGTCAGGAATTGTCAAGCT 57.403 34.783 0.00 0.00 36.45 3.74
2824 2886 5.596836 TTTTGTCAGGAATTGTCAAGCTT 57.403 34.783 0.00 0.00 36.45 3.74
2825 2887 4.572985 TTGTCAGGAATTGTCAAGCTTG 57.427 40.909 20.81 20.81 32.35 4.01
2826 2888 2.294233 TGTCAGGAATTGTCAAGCTTGC 59.706 45.455 21.99 16.43 0.00 4.01
2827 2889 2.555757 GTCAGGAATTGTCAAGCTTGCT 59.444 45.455 21.99 8.08 0.00 3.91
2828 2890 3.753272 GTCAGGAATTGTCAAGCTTGCTA 59.247 43.478 21.99 13.46 0.00 3.49
2829 2891 4.216257 GTCAGGAATTGTCAAGCTTGCTAA 59.784 41.667 21.99 17.74 0.00 3.09
2830 2892 4.826733 TCAGGAATTGTCAAGCTTGCTAAA 59.173 37.500 21.99 14.85 0.00 1.85
2831 2893 5.048504 TCAGGAATTGTCAAGCTTGCTAAAG 60.049 40.000 21.99 5.33 36.41 1.85
2845 2907 3.531934 GCTAAAGCAAATTGCCATCCT 57.468 42.857 15.04 0.00 46.52 3.24
2846 2908 3.451526 GCTAAAGCAAATTGCCATCCTC 58.548 45.455 15.04 0.00 46.52 3.71
2847 2909 2.660189 AAAGCAAATTGCCATCCTCG 57.340 45.000 15.04 0.00 46.52 4.63
2848 2910 0.174162 AAGCAAATTGCCATCCTCGC 59.826 50.000 15.04 0.00 46.52 5.03
2849 2911 0.966875 AGCAAATTGCCATCCTCGCA 60.967 50.000 15.04 0.00 46.52 5.10
2853 2915 4.490696 TTGCCATCCTCGCAACAA 57.509 50.000 0.00 0.00 41.17 2.83
2854 2916 1.956043 TTGCCATCCTCGCAACAAC 59.044 52.632 0.00 0.00 41.17 3.32
2855 2917 0.821301 TTGCCATCCTCGCAACAACA 60.821 50.000 0.00 0.00 41.17 3.33
2856 2918 0.608856 TGCCATCCTCGCAACAACAT 60.609 50.000 0.00 0.00 32.05 2.71
2857 2919 1.339535 TGCCATCCTCGCAACAACATA 60.340 47.619 0.00 0.00 32.05 2.29
2858 2920 1.742831 GCCATCCTCGCAACAACATAA 59.257 47.619 0.00 0.00 0.00 1.90
2859 2921 2.358898 GCCATCCTCGCAACAACATAAT 59.641 45.455 0.00 0.00 0.00 1.28
2860 2922 3.181487 GCCATCCTCGCAACAACATAATT 60.181 43.478 0.00 0.00 0.00 1.40
2861 2923 4.677779 GCCATCCTCGCAACAACATAATTT 60.678 41.667 0.00 0.00 0.00 1.82
2862 2924 5.449862 GCCATCCTCGCAACAACATAATTTA 60.450 40.000 0.00 0.00 0.00 1.40
2863 2925 6.735694 GCCATCCTCGCAACAACATAATTTAT 60.736 38.462 0.00 0.00 0.00 1.40
2864 2926 6.857964 CCATCCTCGCAACAACATAATTTATC 59.142 38.462 0.00 0.00 0.00 1.75
2865 2927 6.993786 TCCTCGCAACAACATAATTTATCA 57.006 33.333 0.00 0.00 0.00 2.15
2866 2928 7.566760 TCCTCGCAACAACATAATTTATCAT 57.433 32.000 0.00 0.00 0.00 2.45
2867 2929 7.995289 TCCTCGCAACAACATAATTTATCATT 58.005 30.769 0.00 0.00 0.00 2.57
2868 2930 9.114952 TCCTCGCAACAACATAATTTATCATTA 57.885 29.630 0.00 0.00 0.00 1.90
2869 2931 9.729023 CCTCGCAACAACATAATTTATCATTAA 57.271 29.630 0.00 0.00 0.00 1.40
2886 2948 7.837202 ATCATTAAAGACGTTCGATTTACCA 57.163 32.000 0.00 0.00 0.00 3.25
2887 2949 7.837202 TCATTAAAGACGTTCGATTTACCAT 57.163 32.000 0.00 0.00 0.00 3.55
2888 2950 7.680982 TCATTAAAGACGTTCGATTTACCATG 58.319 34.615 0.00 6.26 0.00 3.66
2889 2951 7.546316 TCATTAAAGACGTTCGATTTACCATGA 59.454 33.333 0.00 7.99 0.00 3.07
2890 2952 5.526010 AAAGACGTTCGATTTACCATGAC 57.474 39.130 0.00 0.00 0.00 3.06
2891 2953 4.451629 AGACGTTCGATTTACCATGACT 57.548 40.909 0.00 0.00 0.00 3.41
2892 2954 4.174009 AGACGTTCGATTTACCATGACTG 58.826 43.478 0.00 0.00 0.00 3.51
2893 2955 4.082408 AGACGTTCGATTTACCATGACTGA 60.082 41.667 0.00 0.00 0.00 3.41
2894 2956 4.562082 ACGTTCGATTTACCATGACTGAA 58.438 39.130 0.00 0.00 0.00 3.02
2895 2957 4.992319 ACGTTCGATTTACCATGACTGAAA 59.008 37.500 0.00 0.00 0.00 2.69
2896 2958 5.467399 ACGTTCGATTTACCATGACTGAAAA 59.533 36.000 0.00 0.00 0.00 2.29
2897 2959 6.148811 ACGTTCGATTTACCATGACTGAAAAT 59.851 34.615 0.00 0.00 0.00 1.82
2898 2960 6.465781 CGTTCGATTTACCATGACTGAAAATG 59.534 38.462 0.00 0.00 0.00 2.32
2899 2961 7.305474 GTTCGATTTACCATGACTGAAAATGT 58.695 34.615 0.00 0.00 0.00 2.71
2900 2962 8.447833 GTTCGATTTACCATGACTGAAAATGTA 58.552 33.333 0.00 0.00 0.00 2.29
2901 2963 8.554835 TCGATTTACCATGACTGAAAATGTAA 57.445 30.769 0.00 0.00 0.00 2.41
2902 2964 8.447833 TCGATTTACCATGACTGAAAATGTAAC 58.552 33.333 0.00 0.00 0.00 2.50
2903 2965 7.425309 CGATTTACCATGACTGAAAATGTAACG 59.575 37.037 0.00 0.00 0.00 3.18
2904 2966 7.499321 TTTACCATGACTGAAAATGTAACGT 57.501 32.000 0.00 0.00 0.00 3.99
2905 2967 5.607119 ACCATGACTGAAAATGTAACGTC 57.393 39.130 0.00 0.00 0.00 4.34
2906 2968 5.060506 ACCATGACTGAAAATGTAACGTCA 58.939 37.500 0.00 0.00 36.06 4.35
2907 2969 5.179368 ACCATGACTGAAAATGTAACGTCAG 59.821 40.000 0.00 0.00 42.60 3.51
2908 2970 5.408299 CCATGACTGAAAATGTAACGTCAGA 59.592 40.000 6.53 0.00 39.94 3.27
2909 2971 6.092670 CCATGACTGAAAATGTAACGTCAGAT 59.907 38.462 6.53 0.00 39.94 2.90
2910 2972 7.361201 CCATGACTGAAAATGTAACGTCAGATT 60.361 37.037 6.53 0.00 39.94 2.40
2911 2973 7.490962 TGACTGAAAATGTAACGTCAGATTT 57.509 32.000 6.53 0.00 39.94 2.17
2912 2974 7.925993 TGACTGAAAATGTAACGTCAGATTTT 58.074 30.769 6.27 6.27 39.94 1.82
2913 2975 8.402472 TGACTGAAAATGTAACGTCAGATTTTT 58.598 29.630 7.88 2.70 39.94 1.94
2914 2976 9.872757 GACTGAAAATGTAACGTCAGATTTTTA 57.127 29.630 7.88 3.61 39.94 1.52
2915 2977 9.878599 ACTGAAAATGTAACGTCAGATTTTTAG 57.121 29.630 18.67 18.67 39.07 1.85
2916 2978 8.722342 TGAAAATGTAACGTCAGATTTTTAGC 57.278 30.769 7.88 0.00 33.09 3.09
2917 2979 8.346300 TGAAAATGTAACGTCAGATTTTTAGCA 58.654 29.630 7.88 0.04 33.09 3.49
2918 2980 9.341899 GAAAATGTAACGTCAGATTTTTAGCAT 57.658 29.630 7.88 0.00 33.09 3.79
2919 2981 9.691362 AAAATGTAACGTCAGATTTTTAGCATT 57.309 25.926 0.81 0.00 29.76 3.56
2920 2982 9.691362 AAATGTAACGTCAGATTTTTAGCATTT 57.309 25.926 0.00 0.00 0.00 2.32
2921 2983 8.895932 ATGTAACGTCAGATTTTTAGCATTTC 57.104 30.769 0.00 0.00 0.00 2.17
2922 2984 7.302524 TGTAACGTCAGATTTTTAGCATTTCC 58.697 34.615 0.00 0.00 0.00 3.13
2923 2985 5.957842 ACGTCAGATTTTTAGCATTTCCA 57.042 34.783 0.00 0.00 0.00 3.53
2924 2986 6.325919 ACGTCAGATTTTTAGCATTTCCAA 57.674 33.333 0.00 0.00 0.00 3.53
2925 2987 6.744112 ACGTCAGATTTTTAGCATTTCCAAA 58.256 32.000 0.00 0.00 0.00 3.28
2926 2988 7.378181 ACGTCAGATTTTTAGCATTTCCAAAT 58.622 30.769 0.00 0.00 0.00 2.32
2927 2989 7.329226 ACGTCAGATTTTTAGCATTTCCAAATG 59.671 33.333 7.55 7.55 46.55 2.32
2928 2990 7.201461 CGTCAGATTTTTAGCATTTCCAAATGG 60.201 37.037 12.81 0.00 44.54 3.16
2958 3020 0.464870 AAATTGTGCTTGGCTGTGCA 59.535 45.000 0.00 0.00 36.79 4.57
2964 3026 0.034283 TGCTTGGCTGTGCATCCATA 60.034 50.000 6.20 0.00 33.94 2.74
3034 3100 5.124936 GGTACAATCCAAAACCCAGTATGTC 59.875 44.000 0.00 0.00 0.00 3.06
3063 3129 0.617249 AGGAAGCAGCCAGTAGAGCT 60.617 55.000 0.00 0.00 42.70 4.09
3077 3143 3.579626 GAGCTGCGCCGTTTGTCAC 62.580 63.158 4.18 0.00 0.00 3.67
3094 3160 2.159627 GTCACCCGAAAGCTGTATTGTG 59.840 50.000 0.00 0.00 0.00 3.33
3167 3233 0.038599 ATCTGAAGCCACCACATGCA 59.961 50.000 0.00 0.00 0.00 3.96
3168 3234 0.038599 TCTGAAGCCACCACATGCAT 59.961 50.000 0.00 0.00 0.00 3.96
3204 3270 4.682860 GCCGCGTAGTGCTAGATATTTTAA 59.317 41.667 4.92 0.00 43.27 1.52
3232 3298 8.836959 ATCGTTAGTGAAAAACAGTTTCTTTC 57.163 30.769 0.00 1.44 33.78 2.62
3233 3299 7.245604 TCGTTAGTGAAAAACAGTTTCTTTCC 58.754 34.615 0.00 0.00 33.78 3.13
3234 3300 6.193959 CGTTAGTGAAAAACAGTTTCTTTCCG 59.806 38.462 0.00 0.00 33.78 4.30
3235 3301 5.890424 AGTGAAAAACAGTTTCTTTCCGA 57.110 34.783 0.00 0.00 0.00 4.55
3236 3302 6.262193 AGTGAAAAACAGTTTCTTTCCGAA 57.738 33.333 0.00 0.00 0.00 4.30
3237 3303 6.863275 AGTGAAAAACAGTTTCTTTCCGAAT 58.137 32.000 0.00 0.00 0.00 3.34
3238 3304 7.320399 AGTGAAAAACAGTTTCTTTCCGAATT 58.680 30.769 0.00 0.00 0.00 2.17
3239 3305 7.488150 AGTGAAAAACAGTTTCTTTCCGAATTC 59.512 33.333 0.00 0.00 0.00 2.17
3240 3306 7.488150 GTGAAAAACAGTTTCTTTCCGAATTCT 59.512 33.333 3.52 0.00 0.00 2.40
3241 3307 7.487829 TGAAAAACAGTTTCTTTCCGAATTCTG 59.512 33.333 3.52 0.00 38.61 3.02
3242 3308 6.693315 AAACAGTTTCTTTCCGAATTCTGA 57.307 33.333 3.52 0.00 37.38 3.27
3243 3309 5.931441 ACAGTTTCTTTCCGAATTCTGAG 57.069 39.130 3.52 0.00 37.38 3.35
3244 3310 4.757149 ACAGTTTCTTTCCGAATTCTGAGG 59.243 41.667 3.52 0.00 37.38 3.86
3245 3311 4.997395 CAGTTTCTTTCCGAATTCTGAGGA 59.003 41.667 3.52 0.00 36.73 3.71
3246 3312 5.470098 CAGTTTCTTTCCGAATTCTGAGGAA 59.530 40.000 8.69 8.69 41.76 3.36
3247 3313 6.150140 CAGTTTCTTTCCGAATTCTGAGGAAT 59.850 38.462 12.38 1.69 42.81 3.01
3274 3340 4.449131 ACTGAAGTGAGGATCGTCGTATA 58.551 43.478 10.63 0.00 38.61 1.47
3285 3351 3.982576 TCGTCGTATACATGCATGAGT 57.017 42.857 32.75 21.02 0.00 3.41
3290 3356 6.072673 TCGTCGTATACATGCATGAGTAATCT 60.073 38.462 32.75 11.20 0.00 2.40
3291 3357 6.032880 CGTCGTATACATGCATGAGTAATCTG 59.967 42.308 32.75 12.53 0.00 2.90
3292 3358 7.084486 GTCGTATACATGCATGAGTAATCTGA 58.916 38.462 32.75 15.50 0.00 3.27
3293 3359 7.757173 GTCGTATACATGCATGAGTAATCTGAT 59.243 37.037 32.75 8.94 0.00 2.90
3294 3360 7.756722 TCGTATACATGCATGAGTAATCTGATG 59.243 37.037 32.75 11.61 38.11 3.07
3295 3361 7.756722 CGTATACATGCATGAGTAATCTGATGA 59.243 37.037 32.75 2.56 37.45 2.92
3296 3362 9.428097 GTATACATGCATGAGTAATCTGATGAA 57.572 33.333 32.75 1.94 37.45 2.57
3316 3382 7.804600 TGATGAATTGAAGATCAACAACGAAAG 59.195 33.333 6.71 0.00 39.45 2.62
3317 3383 7.258022 TGAATTGAAGATCAACAACGAAAGA 57.742 32.000 6.71 0.00 39.45 2.52
3318 3384 7.702386 TGAATTGAAGATCAACAACGAAAGAA 58.298 30.769 6.71 0.00 39.45 2.52
3319 3385 7.857389 TGAATTGAAGATCAACAACGAAAGAAG 59.143 33.333 6.71 0.00 39.45 2.85
3336 3402 6.630443 CGAAAGAAGAATTTGAATATGCCGAG 59.370 38.462 0.00 0.00 0.00 4.63
3337 3403 7.396540 AAAGAAGAATTTGAATATGCCGAGT 57.603 32.000 0.00 0.00 0.00 4.18
3338 3404 7.396540 AAGAAGAATTTGAATATGCCGAGTT 57.603 32.000 0.00 0.00 0.00 3.01
3343 3409 3.530265 TTGAATATGCCGAGTTACCGT 57.470 42.857 0.00 0.00 0.00 4.83
3345 3411 3.968649 TGAATATGCCGAGTTACCGTAC 58.031 45.455 0.00 0.00 0.00 3.67
3348 3414 2.008268 ATGCCGAGTTACCGTACCCG 62.008 60.000 0.00 0.00 0.00 5.28
3381 3447 8.306313 ACCTACAAGGAAGAAAAGTTGATTTT 57.694 30.769 0.00 0.00 39.86 1.82
3382 3448 8.197439 ACCTACAAGGAAGAAAAGTTGATTTTG 58.803 33.333 0.00 0.00 38.27 2.44
3392 3458 0.881118 GTTGATTTTGGCGCTCCAGA 59.119 50.000 7.64 0.00 44.53 3.86
3393 3459 0.881118 TTGATTTTGGCGCTCCAGAC 59.119 50.000 7.64 0.00 44.53 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 93 2.202623 GACGAGATCGCCGCAAGT 60.203 61.111 1.39 0.00 44.43 3.16
108 109 1.386772 ACTGGTGGAGTTTGGGGGA 60.387 57.895 0.00 0.00 0.00 4.81
126 127 3.280634 GAGATCTCGGAGGCGCGA 61.281 66.667 12.10 0.00 0.00 5.87
194 195 1.074090 TCACTCACTTCCCCACCCA 60.074 57.895 0.00 0.00 0.00 4.51
210 211 3.069586 AGTGGAGTCGTCACATTTTCTCA 59.930 43.478 2.89 0.00 37.58 3.27
216 217 0.608640 GGGAGTGGAGTCGTCACATT 59.391 55.000 2.89 0.00 37.58 2.71
244 246 2.132762 GATGGACGGCAATAAGTACGG 58.867 52.381 0.00 0.00 0.00 4.02
331 333 1.953686 CCATTTCCCTTGTCACGTTGT 59.046 47.619 0.00 0.00 0.00 3.32
608 613 4.157840 TGAGAGATCTTCGGACAAATTCGA 59.842 41.667 0.00 0.00 0.00 3.71
609 614 4.424626 TGAGAGATCTTCGGACAAATTCG 58.575 43.478 0.00 0.00 0.00 3.34
610 615 5.415221 ACTGAGAGATCTTCGGACAAATTC 58.585 41.667 16.08 0.00 0.00 2.17
611 616 5.413309 ACTGAGAGATCTTCGGACAAATT 57.587 39.130 16.08 0.00 0.00 1.82
612 617 5.413309 AACTGAGAGATCTTCGGACAAAT 57.587 39.130 16.08 0.00 0.00 2.32
613 618 4.873746 AACTGAGAGATCTTCGGACAAA 57.126 40.909 16.08 0.00 0.00 2.83
614 619 4.765339 TGTAACTGAGAGATCTTCGGACAA 59.235 41.667 16.08 3.67 0.00 3.18
615 620 4.332828 TGTAACTGAGAGATCTTCGGACA 58.667 43.478 16.08 10.30 0.00 4.02
616 621 4.966965 TGTAACTGAGAGATCTTCGGAC 57.033 45.455 16.08 8.56 0.00 4.79
617 622 6.773200 ACATATGTAACTGAGAGATCTTCGGA 59.227 38.462 6.56 0.57 0.00 4.55
618 623 6.860539 CACATATGTAACTGAGAGATCTTCGG 59.139 42.308 8.32 4.56 0.00 4.30
619 624 7.643579 TCACATATGTAACTGAGAGATCTTCG 58.356 38.462 8.32 0.00 0.00 3.79
620 625 9.243637 GTTCACATATGTAACTGAGAGATCTTC 57.756 37.037 8.32 0.00 0.00 2.87
621 626 8.976353 AGTTCACATATGTAACTGAGAGATCTT 58.024 33.333 20.46 0.00 32.38 2.40
622 627 8.532186 AGTTCACATATGTAACTGAGAGATCT 57.468 34.615 20.46 0.00 32.38 2.75
625 630 9.634021 AGATAGTTCACATATGTAACTGAGAGA 57.366 33.333 25.16 14.45 35.23 3.10
651 656 9.871238 GCTATCTTCGGAATGGTTATTTAGATA 57.129 33.333 0.00 0.00 0.00 1.98
652 657 8.375506 TGCTATCTTCGGAATGGTTATTTAGAT 58.624 33.333 0.00 0.00 0.00 1.98
653 658 7.732025 TGCTATCTTCGGAATGGTTATTTAGA 58.268 34.615 0.00 0.00 0.00 2.10
654 659 7.962964 TGCTATCTTCGGAATGGTTATTTAG 57.037 36.000 0.00 0.00 0.00 1.85
655 660 8.783093 CATTGCTATCTTCGGAATGGTTATTTA 58.217 33.333 0.00 0.00 36.80 1.40
656 661 7.651808 CATTGCTATCTTCGGAATGGTTATTT 58.348 34.615 0.00 0.00 36.80 1.40
657 662 6.294176 GCATTGCTATCTTCGGAATGGTTATT 60.294 38.462 0.16 0.00 39.61 1.40
658 663 5.182001 GCATTGCTATCTTCGGAATGGTTAT 59.818 40.000 0.16 0.00 39.61 1.89
659 664 4.515191 GCATTGCTATCTTCGGAATGGTTA 59.485 41.667 0.16 0.00 39.61 2.85
696 701 1.542030 ACCACGCGGCATTTCATTTTA 59.458 42.857 12.47 0.00 34.57 1.52
697 702 0.316841 ACCACGCGGCATTTCATTTT 59.683 45.000 12.47 0.00 34.57 1.82
708 713 0.030908 GGAGAAGATAGACCACGCGG 59.969 60.000 12.47 0.00 38.77 6.46
710 715 2.025155 TCTGGAGAAGATAGACCACGC 58.975 52.381 0.00 0.00 0.00 5.34
756 761 5.539582 TTAAAACCGGATGTTTCTGATCG 57.460 39.130 9.46 0.00 46.39 3.69
761 766 3.692593 CCCGATTAAAACCGGATGTTTCT 59.307 43.478 9.46 0.00 46.39 2.52
770 775 2.043676 GAGCCGCCCGATTAAAACCG 62.044 60.000 0.00 0.00 0.00 4.44
772 777 0.377203 CTGAGCCGCCCGATTAAAAC 59.623 55.000 0.00 0.00 0.00 2.43
791 796 3.723348 GACGGCCTGCAACGAACC 61.723 66.667 11.41 0.00 0.00 3.62
804 809 4.994471 TGCTGCTGTGGCTGACGG 62.994 66.667 0.00 0.00 39.31 4.79
852 857 4.790962 CCGGTGCAGCATGGCTCT 62.791 66.667 17.33 0.00 36.40 4.09
1206 1211 1.043116 AGCCGAGTGATCGAATGGGA 61.043 55.000 0.00 0.00 34.64 4.37
1222 1227 4.217118 CCTAATGGCATAGTGAATTGAGCC 59.783 45.833 0.00 0.00 42.32 4.70
1226 1231 5.240183 CCACTCCTAATGGCATAGTGAATTG 59.760 44.000 23.30 8.15 37.70 2.32
1305 1318 4.087892 AGGCAGCATCCGAAGCGT 62.088 61.111 0.00 0.00 37.01 5.07
1306 1319 3.570638 CAGGCAGCATCCGAAGCG 61.571 66.667 0.00 0.00 37.01 4.68
1307 1320 3.885521 GCAGGCAGCATCCGAAGC 61.886 66.667 0.00 0.00 44.79 3.86
1308 1321 3.570638 CGCAGGCAGCATCCGAAG 61.571 66.667 1.96 0.00 46.13 3.79
1309 1322 4.393155 ACGCAGGCAGCATCCGAA 62.393 61.111 0.00 0.00 46.13 4.30
1310 1323 4.819761 GACGCAGGCAGCATCCGA 62.820 66.667 0.00 0.00 46.13 4.55
1321 1334 2.209838 ATTCAGGTACATCGACGCAG 57.790 50.000 0.00 0.00 0.00 5.18
1325 1338 3.689649 AGGCAAAATTCAGGTACATCGAC 59.310 43.478 0.00 0.00 0.00 4.20
1334 1347 4.589216 TTCAGAACAGGCAAAATTCAGG 57.411 40.909 0.00 0.00 0.00 3.86
1565 1578 1.597663 CTCACCGTGTTGTTCTGGAAC 59.402 52.381 6.53 6.53 41.50 3.62
1602 1615 2.161410 CGCAATTGCTTGTAGCCTTGTA 59.839 45.455 26.86 0.00 41.51 2.41
1608 1621 1.072666 GTGGCGCAATTGCTTGTAGC 61.073 55.000 26.86 21.10 42.82 3.58
1609 1622 0.240678 TGTGGCGCAATTGCTTGTAG 59.759 50.000 26.86 12.81 39.32 2.74
1610 1623 0.240678 CTGTGGCGCAATTGCTTGTA 59.759 50.000 26.86 8.89 39.32 2.41
1611 1624 1.007038 CTGTGGCGCAATTGCTTGT 60.007 52.632 26.86 0.00 39.32 3.16
1612 1625 1.005294 GACTGTGGCGCAATTGCTTG 61.005 55.000 26.86 14.25 39.32 4.01
1613 1626 1.286880 GACTGTGGCGCAATTGCTT 59.713 52.632 26.86 3.48 39.32 3.91
1614 1627 1.898094 TGACTGTGGCGCAATTGCT 60.898 52.632 26.86 7.34 39.32 3.91
1615 1628 1.730547 GTGACTGTGGCGCAATTGC 60.731 57.895 20.76 20.76 37.78 3.56
1616 1629 0.386352 CTGTGACTGTGGCGCAATTG 60.386 55.000 10.83 0.00 0.00 2.32
1617 1630 1.518056 CCTGTGACTGTGGCGCAATT 61.518 55.000 10.83 0.00 0.00 2.32
1706 1719 2.800544 CAATGCCATGCCTAGTACGTAC 59.199 50.000 18.10 18.10 0.00 3.67
1707 1720 2.224185 CCAATGCCATGCCTAGTACGTA 60.224 50.000 0.00 0.00 0.00 3.57
1708 1721 1.475034 CCAATGCCATGCCTAGTACGT 60.475 52.381 0.00 0.00 0.00 3.57
1709 1722 1.229428 CCAATGCCATGCCTAGTACG 58.771 55.000 0.00 0.00 0.00 3.67
1750 1763 2.290323 ACGTACTACTACCTTGTCCCGT 60.290 50.000 0.00 0.00 0.00 5.28
1751 1764 2.352960 GACGTACTACTACCTTGTCCCG 59.647 54.545 0.00 0.00 0.00 5.14
1752 1765 2.685388 GGACGTACTACTACCTTGTCCC 59.315 54.545 0.00 0.00 38.73 4.46
1753 1766 3.376546 CAGGACGTACTACTACCTTGTCC 59.623 52.174 0.00 0.33 43.63 4.02
1754 1767 3.376546 CCAGGACGTACTACTACCTTGTC 59.623 52.174 0.00 0.00 0.00 3.18
1755 1768 3.245052 ACCAGGACGTACTACTACCTTGT 60.245 47.826 0.00 0.00 0.00 3.16
1756 1769 3.128242 CACCAGGACGTACTACTACCTTG 59.872 52.174 0.00 0.00 0.00 3.61
1757 1770 3.350833 CACCAGGACGTACTACTACCTT 58.649 50.000 0.00 0.00 0.00 3.50
1758 1771 2.356535 CCACCAGGACGTACTACTACCT 60.357 54.545 0.00 0.00 36.89 3.08
1759 1772 2.019984 CCACCAGGACGTACTACTACC 58.980 57.143 0.00 0.00 36.89 3.18
1760 1773 2.421424 CACCACCAGGACGTACTACTAC 59.579 54.545 0.00 0.00 38.69 2.73
1761 1774 2.040278 ACACCACCAGGACGTACTACTA 59.960 50.000 0.00 0.00 38.69 1.82
1762 1775 1.202976 ACACCACCAGGACGTACTACT 60.203 52.381 0.00 0.00 38.69 2.57
1763 1776 1.068055 CACACCACCAGGACGTACTAC 60.068 57.143 0.00 0.00 38.69 2.73
1764 1777 1.202915 TCACACCACCAGGACGTACTA 60.203 52.381 0.00 0.00 38.69 1.82
1810 1823 1.407851 GCATGATGGCTGGAGAGTGAA 60.408 52.381 0.00 0.00 0.00 3.18
1828 1841 4.158949 ACATTGAAGATTGCTAGCATTGCA 59.841 37.500 20.13 9.51 38.80 4.08
1870 1884 2.046314 CCATCGACGCCCAAAGGT 60.046 61.111 0.00 0.00 34.57 3.50
1879 1897 0.110238 CCAACTGCAAACCATCGACG 60.110 55.000 0.00 0.00 0.00 5.12
1948 1966 0.975040 CTGAGAGGTCTCCCTGTGGG 60.975 65.000 4.53 0.00 42.86 4.61
1964 1982 6.319405 GGGTTTCAAAGTTAGTTTGTACCTGA 59.681 38.462 24.03 3.64 45.18 3.86
2052 2104 1.523758 AGGATTGTCTTGTCAACCGC 58.476 50.000 0.00 0.00 0.00 5.68
2054 2106 5.113502 CAAGAAGGATTGTCTTGTCAACC 57.886 43.478 6.09 0.00 44.58 3.77
2114 2166 4.808895 TGATTGATTACAGTAATTCGCGCT 59.191 37.500 5.56 0.00 0.00 5.92
2158 2210 5.352643 ACGTAGCAGAAATGGTTTGTTAC 57.647 39.130 0.00 0.00 0.00 2.50
2166 2218 6.273825 ACTAGTTGATACGTAGCAGAAATGG 58.726 40.000 13.88 4.34 0.00 3.16
2167 2219 7.166638 CAGACTAGTTGATACGTAGCAGAAATG 59.833 40.741 13.88 7.36 0.00 2.32
2168 2220 7.067129 TCAGACTAGTTGATACGTAGCAGAAAT 59.933 37.037 13.88 2.16 0.00 2.17
2169 2221 6.373495 TCAGACTAGTTGATACGTAGCAGAAA 59.627 38.462 13.88 0.00 0.00 2.52
2172 2224 5.736486 TCAGACTAGTTGATACGTAGCAG 57.264 43.478 13.88 4.98 0.00 4.24
2173 2225 6.694877 ATTCAGACTAGTTGATACGTAGCA 57.305 37.500 9.93 9.93 0.00 3.49
2174 2226 7.419204 AGAATTCAGACTAGTTGATACGTAGC 58.581 38.462 8.44 3.32 0.00 3.58
2175 2227 8.613482 TGAGAATTCAGACTAGTTGATACGTAG 58.387 37.037 8.44 0.00 0.00 3.51
2179 2237 9.296400 GAAGTGAGAATTCAGACTAGTTGATAC 57.704 37.037 8.44 0.00 32.98 2.24
2189 2247 3.868077 CCCATCGAAGTGAGAATTCAGAC 59.132 47.826 8.44 3.54 32.98 3.51
2232 2290 1.741770 GGACGTCATCGCAAAGCCT 60.742 57.895 18.91 0.00 41.18 4.58
2310 2368 0.949105 CCCAGAACACCACGTACTGC 60.949 60.000 0.00 0.00 0.00 4.40
2358 2416 4.475135 GCCTTCCAGACCGGGAGC 62.475 72.222 6.32 0.00 39.46 4.70
2364 2422 1.599576 GTCCTCTGCCTTCCAGACC 59.400 63.158 0.00 0.00 45.44 3.85
2372 2430 4.451544 GACTCAGGTCCTCTGCCT 57.548 61.111 0.00 0.00 43.06 4.75
2445 2503 1.555075 ACTTGTGCCCGTATGATCACT 59.445 47.619 0.00 0.00 0.00 3.41
2480 2540 8.352137 TCAATTCACAATTAGACATGGACATT 57.648 30.769 0.00 0.00 0.00 2.71
2550 2610 6.808008 TTAGCAGATGAACTTTTTCTGGAG 57.192 37.500 0.00 0.00 37.84 3.86
2555 2615 5.509622 GCGACATTAGCAGATGAACTTTTTC 59.490 40.000 6.36 0.00 34.19 2.29
2556 2616 5.048782 TGCGACATTAGCAGATGAACTTTTT 60.049 36.000 6.36 0.00 40.01 1.94
2559 2619 3.599343 TGCGACATTAGCAGATGAACTT 58.401 40.909 6.36 0.00 40.01 2.66
2560 2620 3.251479 TGCGACATTAGCAGATGAACT 57.749 42.857 6.36 0.00 40.01 3.01
2568 2628 4.039124 TCAAGGATATCTGCGACATTAGCA 59.961 41.667 2.05 0.00 42.99 3.49
2569 2629 4.560128 TCAAGGATATCTGCGACATTAGC 58.440 43.478 2.05 0.00 0.00 3.09
2570 2630 6.393171 TCATCAAGGATATCTGCGACATTAG 58.607 40.000 2.05 0.00 0.00 1.73
2571 2631 6.345096 TCATCAAGGATATCTGCGACATTA 57.655 37.500 2.05 0.00 0.00 1.90
2572 2632 5.219343 TCATCAAGGATATCTGCGACATT 57.781 39.130 2.05 0.00 0.00 2.71
2573 2633 4.879197 TCATCAAGGATATCTGCGACAT 57.121 40.909 2.05 0.00 0.00 3.06
2574 2634 4.879197 ATCATCAAGGATATCTGCGACA 57.121 40.909 2.05 0.00 0.00 4.35
2575 2635 7.332926 ACAATTATCATCAAGGATATCTGCGAC 59.667 37.037 2.05 0.00 30.30 5.19
2576 2636 7.389232 ACAATTATCATCAAGGATATCTGCGA 58.611 34.615 2.05 0.00 30.30 5.10
2577 2637 7.606858 ACAATTATCATCAAGGATATCTGCG 57.393 36.000 2.05 0.00 30.30 5.18
2578 2638 9.837525 GAAACAATTATCATCAAGGATATCTGC 57.162 33.333 2.05 0.00 30.30 4.26
2580 2640 9.525826 GGGAAACAATTATCATCAAGGATATCT 57.474 33.333 2.05 0.00 30.30 1.98
2581 2641 9.525826 AGGGAAACAATTATCATCAAGGATATC 57.474 33.333 0.00 0.00 30.30 1.63
2582 2642 9.305555 CAGGGAAACAATTATCATCAAGGATAT 57.694 33.333 0.00 0.00 30.30 1.63
2583 2643 8.501904 TCAGGGAAACAATTATCATCAAGGATA 58.498 33.333 0.00 0.00 0.00 2.59
2584 2644 7.356680 TCAGGGAAACAATTATCATCAAGGAT 58.643 34.615 0.00 0.00 0.00 3.24
2585 2645 6.730447 TCAGGGAAACAATTATCATCAAGGA 58.270 36.000 0.00 0.00 0.00 3.36
2598 2658 1.673626 GCGACCGTATCAGGGAAACAA 60.674 52.381 0.00 0.00 35.02 2.83
2603 2663 1.826921 GAGGCGACCGTATCAGGGA 60.827 63.158 0.00 0.00 35.02 4.20
2610 2670 1.598601 GTTTTTGTTGAGGCGACCGTA 59.401 47.619 0.00 0.00 0.00 4.02
2612 2672 0.661020 AGTTTTTGTTGAGGCGACCG 59.339 50.000 0.00 0.00 0.00 4.79
2652 2712 5.063204 TCCTTGTTCATTTCAACGAGTCAT 58.937 37.500 0.00 0.00 36.40 3.06
2653 2713 4.447290 TCCTTGTTCATTTCAACGAGTCA 58.553 39.130 0.00 0.00 36.40 3.41
2655 2715 6.391227 AAATCCTTGTTCATTTCAACGAGT 57.609 33.333 0.00 0.00 36.40 4.18
2656 2716 6.346040 GCAAAATCCTTGTTCATTTCAACGAG 60.346 38.462 0.00 0.00 37.48 4.18
2658 2718 5.463061 AGCAAAATCCTTGTTCATTTCAACG 59.537 36.000 0.00 0.00 0.00 4.10
2670 2732 5.283717 CGTTCGATTTGTAGCAAAATCCTTG 59.716 40.000 11.61 2.31 41.52 3.61
2672 2734 4.454504 ACGTTCGATTTGTAGCAAAATCCT 59.545 37.500 11.61 0.00 41.52 3.24
2673 2735 4.553429 CACGTTCGATTTGTAGCAAAATCC 59.447 41.667 11.61 1.52 41.52 3.01
2674 2736 5.379003 TCACGTTCGATTTGTAGCAAAATC 58.621 37.500 0.00 8.64 41.27 2.17
2675 2737 5.178623 TCTCACGTTCGATTTGTAGCAAAAT 59.821 36.000 0.00 0.00 32.43 1.82
2676 2738 4.508492 TCTCACGTTCGATTTGTAGCAAAA 59.492 37.500 0.00 0.00 0.00 2.44
2677 2739 4.052608 TCTCACGTTCGATTTGTAGCAAA 58.947 39.130 0.00 0.00 0.00 3.68
2678 2740 3.644823 TCTCACGTTCGATTTGTAGCAA 58.355 40.909 0.00 0.00 0.00 3.91
2679 2741 3.291809 TCTCACGTTCGATTTGTAGCA 57.708 42.857 0.00 0.00 0.00 3.49
2680 2742 4.842139 AATCTCACGTTCGATTTGTAGC 57.158 40.909 0.00 0.00 0.00 3.58
2701 2763 5.764192 AGCATTTGATTTGCCAAGCTAAAAA 59.236 32.000 0.00 0.00 41.06 1.94
2702 2764 5.307204 AGCATTTGATTTGCCAAGCTAAAA 58.693 33.333 0.00 0.00 41.06 1.52
2703 2765 4.897140 AGCATTTGATTTGCCAAGCTAAA 58.103 34.783 0.00 0.00 41.06 1.85
2704 2766 4.540359 AGCATTTGATTTGCCAAGCTAA 57.460 36.364 0.00 0.00 41.06 3.09
2705 2767 4.540359 AAGCATTTGATTTGCCAAGCTA 57.460 36.364 0.00 0.00 41.06 3.32
2706 2768 3.412237 AAGCATTTGATTTGCCAAGCT 57.588 38.095 0.00 0.00 41.06 3.74
2707 2769 3.749609 AGAAAGCATTTGATTTGCCAAGC 59.250 39.130 0.00 0.00 39.27 4.01
2708 2770 5.579511 CCTAGAAAGCATTTGATTTGCCAAG 59.420 40.000 0.00 0.00 39.27 3.61
2709 2771 5.481105 CCTAGAAAGCATTTGATTTGCCAA 58.519 37.500 0.00 0.00 39.27 4.52
2710 2772 4.081531 CCCTAGAAAGCATTTGATTTGCCA 60.082 41.667 0.00 0.00 39.27 4.92
2711 2773 4.436332 CCCTAGAAAGCATTTGATTTGCC 58.564 43.478 0.00 0.00 39.27 4.52
2712 2774 3.867493 GCCCTAGAAAGCATTTGATTTGC 59.133 43.478 0.00 0.00 39.27 3.68
2713 2775 5.075858 TGCCCTAGAAAGCATTTGATTTG 57.924 39.130 0.00 0.00 39.27 2.32
2714 2776 5.246883 ACTTGCCCTAGAAAGCATTTGATTT 59.753 36.000 0.00 0.00 39.27 2.17
2715 2777 4.774200 ACTTGCCCTAGAAAGCATTTGATT 59.226 37.500 0.00 0.00 39.27 2.57
2716 2778 4.347607 ACTTGCCCTAGAAAGCATTTGAT 58.652 39.130 0.00 0.00 39.27 2.57
2717 2779 3.766545 ACTTGCCCTAGAAAGCATTTGA 58.233 40.909 0.00 0.00 39.27 2.69
2718 2780 4.525912 AACTTGCCCTAGAAAGCATTTG 57.474 40.909 0.00 0.00 39.27 2.32
2719 2781 8.416329 CAATATAACTTGCCCTAGAAAGCATTT 58.584 33.333 0.00 0.00 43.98 2.32
2720 2782 7.561356 ACAATATAACTTGCCCTAGAAAGCATT 59.439 33.333 0.00 0.00 39.11 3.56
2721 2783 7.062957 ACAATATAACTTGCCCTAGAAAGCAT 58.937 34.615 0.00 0.00 39.11 3.79
2722 2784 6.423182 ACAATATAACTTGCCCTAGAAAGCA 58.577 36.000 0.00 0.00 37.18 3.91
2723 2785 6.944234 ACAATATAACTTGCCCTAGAAAGC 57.056 37.500 0.00 0.00 0.00 3.51
2724 2786 7.196331 GCAACAATATAACTTGCCCTAGAAAG 58.804 38.462 0.00 0.00 35.29 2.62
2725 2787 6.183360 CGCAACAATATAACTTGCCCTAGAAA 60.183 38.462 0.00 0.00 37.58 2.52
2726 2788 5.295787 CGCAACAATATAACTTGCCCTAGAA 59.704 40.000 0.00 0.00 37.58 2.10
2727 2789 4.814234 CGCAACAATATAACTTGCCCTAGA 59.186 41.667 0.00 0.00 37.58 2.43
2728 2790 4.814234 TCGCAACAATATAACTTGCCCTAG 59.186 41.667 6.41 0.00 37.58 3.02
2729 2791 4.771903 TCGCAACAATATAACTTGCCCTA 58.228 39.130 6.41 0.00 37.58 3.53
2730 2792 3.616219 TCGCAACAATATAACTTGCCCT 58.384 40.909 6.41 0.00 37.58 5.19
2731 2793 3.243068 CCTCGCAACAATATAACTTGCCC 60.243 47.826 6.41 0.00 37.58 5.36
2732 2794 3.625764 TCCTCGCAACAATATAACTTGCC 59.374 43.478 6.41 0.00 37.58 4.52
2733 2795 4.875544 TCCTCGCAACAATATAACTTGC 57.124 40.909 0.00 0.00 37.52 4.01
2734 2796 5.751680 CCATCCTCGCAACAATATAACTTG 58.248 41.667 0.00 0.00 0.00 3.16
2735 2797 4.275936 GCCATCCTCGCAACAATATAACTT 59.724 41.667 0.00 0.00 0.00 2.66
2736 2798 3.815401 GCCATCCTCGCAACAATATAACT 59.185 43.478 0.00 0.00 0.00 2.24
2737 2799 3.563808 TGCCATCCTCGCAACAATATAAC 59.436 43.478 0.00 0.00 32.05 1.89
2738 2800 3.814625 TGCCATCCTCGCAACAATATAA 58.185 40.909 0.00 0.00 32.05 0.98
2739 2801 3.181455 ACTGCCATCCTCGCAACAATATA 60.181 43.478 0.00 0.00 35.40 0.86
2740 2802 2.224606 CTGCCATCCTCGCAACAATAT 58.775 47.619 0.00 0.00 35.40 1.28
2741 2803 1.065491 ACTGCCATCCTCGCAACAATA 60.065 47.619 0.00 0.00 35.40 1.90
2742 2804 0.322816 ACTGCCATCCTCGCAACAAT 60.323 50.000 0.00 0.00 35.40 2.71
2743 2805 0.537143 AACTGCCATCCTCGCAACAA 60.537 50.000 0.00 0.00 35.40 2.83
2744 2806 0.537143 AAACTGCCATCCTCGCAACA 60.537 50.000 0.00 0.00 35.40 3.33
2745 2807 0.169009 GAAACTGCCATCCTCGCAAC 59.831 55.000 0.00 0.00 35.40 4.17
2746 2808 0.036732 AGAAACTGCCATCCTCGCAA 59.963 50.000 0.00 0.00 35.40 4.85
2747 2809 0.036732 AAGAAACTGCCATCCTCGCA 59.963 50.000 0.00 0.00 34.41 5.10
2748 2810 1.168714 AAAGAAACTGCCATCCTCGC 58.831 50.000 0.00 0.00 0.00 5.03
2749 2811 3.181506 GCTAAAAGAAACTGCCATCCTCG 60.182 47.826 0.00 0.00 0.00 4.63
2750 2812 3.758554 TGCTAAAAGAAACTGCCATCCTC 59.241 43.478 0.00 0.00 0.00 3.71
2751 2813 3.766545 TGCTAAAAGAAACTGCCATCCT 58.233 40.909 0.00 0.00 0.00 3.24
2752 2814 4.488879 CTTGCTAAAAGAAACTGCCATCC 58.511 43.478 0.00 0.00 0.00 3.51
2753 2815 3.922850 GCTTGCTAAAAGAAACTGCCATC 59.077 43.478 0.00 0.00 0.00 3.51
2754 2816 3.321682 TGCTTGCTAAAAGAAACTGCCAT 59.678 39.130 0.00 0.00 0.00 4.40
2755 2817 2.692557 TGCTTGCTAAAAGAAACTGCCA 59.307 40.909 0.00 0.00 0.00 4.92
2756 2818 3.369546 TGCTTGCTAAAAGAAACTGCC 57.630 42.857 0.00 0.00 0.00 4.85
2757 2819 4.383948 GTCATGCTTGCTAAAAGAAACTGC 59.616 41.667 0.00 0.00 0.00 4.40
2758 2820 5.522456 TGTCATGCTTGCTAAAAGAAACTG 58.478 37.500 0.00 0.00 0.00 3.16
2759 2821 5.772825 TGTCATGCTTGCTAAAAGAAACT 57.227 34.783 0.00 0.00 0.00 2.66
2760 2822 6.826893 TTTGTCATGCTTGCTAAAAGAAAC 57.173 33.333 0.00 0.00 0.00 2.78
2761 2823 6.646240 GGATTTGTCATGCTTGCTAAAAGAAA 59.354 34.615 0.00 0.00 0.00 2.52
2762 2824 6.015180 AGGATTTGTCATGCTTGCTAAAAGAA 60.015 34.615 0.00 0.00 0.00 2.52
2763 2825 5.477984 AGGATTTGTCATGCTTGCTAAAAGA 59.522 36.000 0.00 0.00 0.00 2.52
2764 2826 5.717119 AGGATTTGTCATGCTTGCTAAAAG 58.283 37.500 0.00 0.00 0.00 2.27
2765 2827 5.726980 AGGATTTGTCATGCTTGCTAAAA 57.273 34.783 0.00 0.00 0.00 1.52
2766 2828 5.472148 CAAGGATTTGTCATGCTTGCTAAA 58.528 37.500 3.52 0.00 39.81 1.85
2767 2829 5.063180 CAAGGATTTGTCATGCTTGCTAA 57.937 39.130 3.52 0.00 39.81 3.09
2768 2830 4.707030 CAAGGATTTGTCATGCTTGCTA 57.293 40.909 3.52 0.00 39.81 3.49
2769 2831 3.587797 CAAGGATTTGTCATGCTTGCT 57.412 42.857 3.52 0.00 39.81 3.91
2771 2833 2.028839 TGGCAAGGATTTGTCATGCTTG 60.029 45.455 10.73 10.73 43.59 4.01
2772 2834 2.250031 TGGCAAGGATTTGTCATGCTT 58.750 42.857 0.00 0.00 43.59 3.91
2773 2835 1.927487 TGGCAAGGATTTGTCATGCT 58.073 45.000 0.00 0.00 43.59 3.79
2778 2840 3.940209 TGAACATGGCAAGGATTTGTC 57.060 42.857 0.00 0.00 39.38 3.18
2779 2841 4.895668 ATTGAACATGGCAAGGATTTGT 57.104 36.364 0.00 0.00 36.65 2.83
2780 2842 6.563222 AAAATTGAACATGGCAAGGATTTG 57.437 33.333 0.00 0.00 37.36 2.32
2801 2863 5.596836 AGCTTGACAATTCCTGACAAAAA 57.403 34.783 0.00 0.00 38.85 1.94
2802 2864 5.350633 CAAGCTTGACAATTCCTGACAAAA 58.649 37.500 22.31 0.00 38.85 2.44
2803 2865 4.737352 GCAAGCTTGACAATTCCTGACAAA 60.737 41.667 30.39 0.00 38.85 2.83
2804 2866 3.243501 GCAAGCTTGACAATTCCTGACAA 60.244 43.478 30.39 0.00 37.36 3.18
2805 2867 2.294233 GCAAGCTTGACAATTCCTGACA 59.706 45.455 30.39 0.00 0.00 3.58
2806 2868 2.555757 AGCAAGCTTGACAATTCCTGAC 59.444 45.455 30.39 7.38 0.00 3.51
2807 2869 2.867624 AGCAAGCTTGACAATTCCTGA 58.132 42.857 30.39 0.00 0.00 3.86
2808 2870 4.771590 TTAGCAAGCTTGACAATTCCTG 57.228 40.909 30.39 0.00 0.00 3.86
2809 2871 5.382618 CTTTAGCAAGCTTGACAATTCCT 57.617 39.130 30.39 16.80 0.00 3.36
2825 2887 3.451526 GAGGATGGCAATTTGCTTTAGC 58.548 45.455 20.06 10.12 44.28 3.09
2826 2888 3.699067 CGAGGATGGCAATTTGCTTTAG 58.301 45.455 20.06 3.49 44.28 1.85
2827 2889 2.159254 GCGAGGATGGCAATTTGCTTTA 60.159 45.455 20.06 8.36 44.28 1.85
2828 2890 1.404583 GCGAGGATGGCAATTTGCTTT 60.405 47.619 20.06 8.59 44.28 3.51
2829 2891 0.174162 GCGAGGATGGCAATTTGCTT 59.826 50.000 20.06 8.93 44.28 3.91
2830 2892 1.811860 GCGAGGATGGCAATTTGCT 59.188 52.632 20.06 1.98 44.28 3.91
2831 2893 4.407551 GCGAGGATGGCAATTTGC 57.592 55.556 13.04 13.04 40.68 3.68
2838 2900 1.378531 TATGTTGTTGCGAGGATGGC 58.621 50.000 0.00 0.00 41.71 4.40
2839 2901 4.637483 AATTATGTTGTTGCGAGGATGG 57.363 40.909 0.00 0.00 0.00 3.51
2840 2902 7.416817 TGATAAATTATGTTGTTGCGAGGATG 58.583 34.615 0.00 0.00 0.00 3.51
2841 2903 7.566760 TGATAAATTATGTTGTTGCGAGGAT 57.433 32.000 0.00 0.00 0.00 3.24
2842 2904 6.993786 TGATAAATTATGTTGTTGCGAGGA 57.006 33.333 0.00 0.00 0.00 3.71
2843 2905 9.729023 TTAATGATAAATTATGTTGTTGCGAGG 57.271 29.630 0.00 0.00 0.00 4.63
2860 2922 9.368674 TGGTAAATCGAACGTCTTTAATGATAA 57.631 29.630 0.00 0.00 0.00 1.75
2861 2923 8.929827 TGGTAAATCGAACGTCTTTAATGATA 57.070 30.769 0.00 0.00 0.00 2.15
2862 2924 7.837202 TGGTAAATCGAACGTCTTTAATGAT 57.163 32.000 0.00 0.00 0.00 2.45
2863 2925 7.546316 TCATGGTAAATCGAACGTCTTTAATGA 59.454 33.333 0.00 0.00 0.00 2.57
2864 2926 7.634817 GTCATGGTAAATCGAACGTCTTTAATG 59.365 37.037 0.00 0.00 0.00 1.90
2865 2927 7.548075 AGTCATGGTAAATCGAACGTCTTTAAT 59.452 33.333 0.00 0.00 0.00 1.40
2866 2928 6.869913 AGTCATGGTAAATCGAACGTCTTTAA 59.130 34.615 0.00 0.00 0.00 1.52
2867 2929 6.309494 CAGTCATGGTAAATCGAACGTCTTTA 59.691 38.462 0.00 0.00 0.00 1.85
2868 2930 5.120208 CAGTCATGGTAAATCGAACGTCTTT 59.880 40.000 0.00 0.00 0.00 2.52
2869 2931 4.625742 CAGTCATGGTAAATCGAACGTCTT 59.374 41.667 0.00 0.00 0.00 3.01
2870 2932 4.082408 TCAGTCATGGTAAATCGAACGTCT 60.082 41.667 0.00 0.00 0.00 4.18
2871 2933 4.171005 TCAGTCATGGTAAATCGAACGTC 58.829 43.478 0.00 0.00 0.00 4.34
2872 2934 4.182693 TCAGTCATGGTAAATCGAACGT 57.817 40.909 0.00 0.00 0.00 3.99
2873 2935 5.524511 TTTCAGTCATGGTAAATCGAACG 57.475 39.130 0.00 0.00 0.00 3.95
2874 2936 7.305474 ACATTTTCAGTCATGGTAAATCGAAC 58.695 34.615 0.00 0.00 0.00 3.95
2875 2937 7.447374 ACATTTTCAGTCATGGTAAATCGAA 57.553 32.000 0.00 0.00 0.00 3.71
2876 2938 8.447833 GTTACATTTTCAGTCATGGTAAATCGA 58.552 33.333 0.00 0.00 0.00 3.59
2877 2939 7.425309 CGTTACATTTTCAGTCATGGTAAATCG 59.575 37.037 0.00 0.00 0.00 3.34
2878 2940 8.234546 ACGTTACATTTTCAGTCATGGTAAATC 58.765 33.333 0.00 0.00 0.00 2.17
2879 2941 8.106247 ACGTTACATTTTCAGTCATGGTAAAT 57.894 30.769 0.00 0.00 0.00 1.40
2880 2942 7.226918 TGACGTTACATTTTCAGTCATGGTAAA 59.773 33.333 0.00 0.00 34.24 2.01
2881 2943 6.706716 TGACGTTACATTTTCAGTCATGGTAA 59.293 34.615 0.00 0.00 34.24 2.85
2882 2944 6.224584 TGACGTTACATTTTCAGTCATGGTA 58.775 36.000 0.00 0.00 34.24 3.25
2883 2945 5.060506 TGACGTTACATTTTCAGTCATGGT 58.939 37.500 0.00 0.00 34.24 3.55
2884 2946 5.408299 TCTGACGTTACATTTTCAGTCATGG 59.592 40.000 0.00 0.00 37.86 3.66
2885 2947 6.466308 TCTGACGTTACATTTTCAGTCATG 57.534 37.500 0.00 0.00 37.86 3.07
2886 2948 7.672983 AATCTGACGTTACATTTTCAGTCAT 57.327 32.000 0.00 0.00 37.86 3.06
2887 2949 7.490962 AAATCTGACGTTACATTTTCAGTCA 57.509 32.000 0.00 0.00 37.38 3.41
2888 2950 8.782533 AAAAATCTGACGTTACATTTTCAGTC 57.217 30.769 6.73 0.00 37.38 3.51
2889 2951 9.878599 CTAAAAATCTGACGTTACATTTTCAGT 57.121 29.630 6.73 0.00 37.38 3.41
2890 2952 8.840867 GCTAAAAATCTGACGTTACATTTTCAG 58.159 33.333 6.73 3.87 37.43 3.02
2891 2953 8.346300 TGCTAAAAATCTGACGTTACATTTTCA 58.654 29.630 6.73 0.14 0.00 2.69
2892 2954 8.722342 TGCTAAAAATCTGACGTTACATTTTC 57.278 30.769 6.73 0.00 0.00 2.29
2893 2955 9.691362 AATGCTAAAAATCTGACGTTACATTTT 57.309 25.926 1.33 1.33 0.00 1.82
2894 2956 9.691362 AAATGCTAAAAATCTGACGTTACATTT 57.309 25.926 0.00 0.00 0.00 2.32
2895 2957 9.341899 GAAATGCTAAAAATCTGACGTTACATT 57.658 29.630 0.00 0.00 0.00 2.71
2896 2958 7.968405 GGAAATGCTAAAAATCTGACGTTACAT 59.032 33.333 0.00 0.00 0.00 2.29
2897 2959 7.041030 TGGAAATGCTAAAAATCTGACGTTACA 60.041 33.333 0.00 0.00 0.00 2.41
2898 2960 7.302524 TGGAAATGCTAAAAATCTGACGTTAC 58.697 34.615 0.00 0.00 0.00 2.50
2899 2961 7.441890 TGGAAATGCTAAAAATCTGACGTTA 57.558 32.000 0.00 0.00 0.00 3.18
2900 2962 6.325919 TGGAAATGCTAAAAATCTGACGTT 57.674 33.333 0.00 0.00 0.00 3.99
2901 2963 5.957842 TGGAAATGCTAAAAATCTGACGT 57.042 34.783 0.00 0.00 0.00 4.34
2902 2964 7.201461 CCATTTGGAAATGCTAAAAATCTGACG 60.201 37.037 6.58 0.00 43.38 4.35
2903 2965 7.818930 TCCATTTGGAAATGCTAAAAATCTGAC 59.181 33.333 6.58 0.00 43.38 3.51
2904 2966 7.905265 TCCATTTGGAAATGCTAAAAATCTGA 58.095 30.769 6.58 0.00 43.38 3.27
2920 2982 5.565455 ATTTGCCTCTTTTTCCATTTGGA 57.435 34.783 0.00 0.00 43.73 3.53
2921 2983 5.532032 ACAATTTGCCTCTTTTTCCATTTGG 59.468 36.000 0.00 0.00 0.00 3.28
2922 2984 6.432107 CACAATTTGCCTCTTTTTCCATTTG 58.568 36.000 0.00 0.00 0.00 2.32
2923 2985 5.008911 GCACAATTTGCCTCTTTTTCCATTT 59.991 36.000 0.00 0.00 46.63 2.32
2924 2986 4.516321 GCACAATTTGCCTCTTTTTCCATT 59.484 37.500 0.00 0.00 46.63 3.16
2925 2987 4.067192 GCACAATTTGCCTCTTTTTCCAT 58.933 39.130 0.00 0.00 46.63 3.41
2926 2988 3.465871 GCACAATTTGCCTCTTTTTCCA 58.534 40.909 0.00 0.00 46.63 3.53
2955 3017 1.447217 CGGTCTGGCTATGGATGCA 59.553 57.895 0.00 0.00 0.00 3.96
2958 3020 2.520536 GGGCGGTCTGGCTATGGAT 61.521 63.158 5.05 0.00 44.11 3.41
2994 3057 1.683917 GTACCAGCTGATCGTCAGGAT 59.316 52.381 17.39 0.00 44.43 3.24
3034 3100 2.032528 TGCTTCCTTGCCGTGGAG 59.967 61.111 0.00 0.00 34.76 3.86
3077 3143 0.451783 GGCACAATACAGCTTTCGGG 59.548 55.000 0.00 0.00 0.00 5.14
3094 3160 1.564348 TGGAAGGACTTTGGGATAGGC 59.436 52.381 0.00 0.00 0.00 3.93
3167 3233 1.587054 GCGGCGAGTCAGGCTATAT 59.413 57.895 12.98 0.00 34.19 0.86
3168 3234 2.904676 CGCGGCGAGTCAGGCTATA 61.905 63.158 19.16 0.00 34.19 1.31
3217 3283 7.543756 TCAGAATTCGGAAAGAAACTGTTTTT 58.456 30.769 7.28 0.00 42.91 1.94
3221 3287 4.757149 CCTCAGAATTCGGAAAGAAACTGT 59.243 41.667 9.61 0.00 42.91 3.55
3222 3288 4.997395 TCCTCAGAATTCGGAAAGAAACTG 59.003 41.667 9.61 10.04 42.91 3.16
3223 3289 5.228945 TCCTCAGAATTCGGAAAGAAACT 57.771 39.130 9.61 0.00 42.91 2.66
3224 3290 5.941948 TTCCTCAGAATTCGGAAAGAAAC 57.058 39.130 9.61 0.00 42.91 2.78
3236 3302 8.924511 TCACTTCAGTTTTAATTCCTCAGAAT 57.075 30.769 0.00 0.00 44.86 2.40
3237 3303 7.445402 CCTCACTTCAGTTTTAATTCCTCAGAA 59.555 37.037 0.00 0.00 36.15 3.02
3238 3304 6.936900 CCTCACTTCAGTTTTAATTCCTCAGA 59.063 38.462 0.00 0.00 0.00 3.27
3239 3305 6.936900 TCCTCACTTCAGTTTTAATTCCTCAG 59.063 38.462 0.00 0.00 0.00 3.35
3240 3306 6.837312 TCCTCACTTCAGTTTTAATTCCTCA 58.163 36.000 0.00 0.00 0.00 3.86
3241 3307 7.201565 CGATCCTCACTTCAGTTTTAATTCCTC 60.202 40.741 0.00 0.00 0.00 3.71
3242 3308 6.595716 CGATCCTCACTTCAGTTTTAATTCCT 59.404 38.462 0.00 0.00 0.00 3.36
3243 3309 6.371825 ACGATCCTCACTTCAGTTTTAATTCC 59.628 38.462 0.00 0.00 0.00 3.01
3244 3310 7.365840 ACGATCCTCACTTCAGTTTTAATTC 57.634 36.000 0.00 0.00 0.00 2.17
3245 3311 6.090898 CGACGATCCTCACTTCAGTTTTAATT 59.909 38.462 0.00 0.00 0.00 1.40
3246 3312 5.577164 CGACGATCCTCACTTCAGTTTTAAT 59.423 40.000 0.00 0.00 0.00 1.40
3247 3313 4.921515 CGACGATCCTCACTTCAGTTTTAA 59.078 41.667 0.00 0.00 0.00 1.52
3248 3314 4.022589 ACGACGATCCTCACTTCAGTTTTA 60.023 41.667 0.00 0.00 0.00 1.52
3253 3319 3.972950 ATACGACGATCCTCACTTCAG 57.027 47.619 0.00 0.00 0.00 3.02
3274 3340 7.501225 TCAATTCATCAGATTACTCATGCATGT 59.499 33.333 25.43 10.70 0.00 3.21
3290 3356 6.799926 TCGTTGTTGATCTTCAATTCATCA 57.200 33.333 0.00 0.00 38.79 3.07
3291 3357 8.017373 TCTTTCGTTGTTGATCTTCAATTCATC 58.983 33.333 0.00 0.00 38.79 2.92
3292 3358 7.874940 TCTTTCGTTGTTGATCTTCAATTCAT 58.125 30.769 0.00 0.00 38.79 2.57
3293 3359 7.258022 TCTTTCGTTGTTGATCTTCAATTCA 57.742 32.000 0.00 0.00 38.79 2.57
3294 3360 8.070171 TCTTCTTTCGTTGTTGATCTTCAATTC 58.930 33.333 0.00 0.00 38.79 2.17
3295 3361 7.930217 TCTTCTTTCGTTGTTGATCTTCAATT 58.070 30.769 0.00 0.00 38.79 2.32
3296 3362 7.496529 TCTTCTTTCGTTGTTGATCTTCAAT 57.503 32.000 0.00 0.00 38.79 2.57
3297 3363 6.918892 TCTTCTTTCGTTGTTGATCTTCAA 57.081 33.333 0.00 0.00 33.32 2.69
3316 3382 7.132863 GGTAACTCGGCATATTCAAATTCTTC 58.867 38.462 0.00 0.00 0.00 2.87
3317 3383 6.238374 CGGTAACTCGGCATATTCAAATTCTT 60.238 38.462 0.00 0.00 0.00 2.52
3318 3384 5.236478 CGGTAACTCGGCATATTCAAATTCT 59.764 40.000 0.00 0.00 0.00 2.40
3319 3385 5.007332 ACGGTAACTCGGCATATTCAAATTC 59.993 40.000 0.00 0.00 0.00 2.17
3330 3396 2.699768 CGGGTACGGTAACTCGGCA 61.700 63.158 2.81 0.00 39.72 5.69
3359 3425 6.983890 GCCAAAATCAACTTTTCTTCCTTGTA 59.016 34.615 0.00 0.00 34.80 2.41
3360 3426 5.817296 GCCAAAATCAACTTTTCTTCCTTGT 59.183 36.000 0.00 0.00 34.80 3.16
3365 3431 4.051237 AGCGCCAAAATCAACTTTTCTTC 58.949 39.130 2.29 0.00 34.80 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.