Multiple sequence alignment - TraesCS2B01G195200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G195200 chr2B 100.000 8615 0 0 1 8615 172671545 172680159 0.000000e+00 15910.0
1 TraesCS2B01G195200 chr2B 99.195 745 6 0 1 745 618053642 618052898 0.000000e+00 1343.0
2 TraesCS2B01G195200 chr2B 86.970 967 105 16 6373 7328 172804517 172805473 0.000000e+00 1068.0
3 TraesCS2B01G195200 chr2B 93.214 501 31 2 1 498 781262574 781263074 0.000000e+00 734.0
4 TraesCS2B01G195200 chr2B 89.824 511 44 7 6363 6868 172686728 172687235 0.000000e+00 649.0
5 TraesCS2B01G195200 chr2B 89.873 395 39 1 6853 7246 172687256 172687650 2.780000e-139 507.0
6 TraesCS2B01G195200 chr2B 94.182 275 14 2 477 749 781263086 781263360 1.340000e-112 418.0
7 TraesCS2B01G195200 chr2B 80.174 575 63 30 200 744 731249499 731250052 4.880000e-102 383.0
8 TraesCS2B01G195200 chr2B 86.268 284 38 1 7324 7607 172809938 172810220 3.020000e-79 307.0
9 TraesCS2B01G195200 chr2B 82.840 338 18 19 7621 7921 172688041 172688375 5.130000e-67 267.0
10 TraesCS2B01G195200 chr2B 98.276 58 1 0 7627 7684 172810317 172810374 1.530000e-17 102.0
11 TraesCS2B01G195200 chr2B 100.000 30 0 0 3656 3685 172675087 172675116 1.000000e-03 56.5
12 TraesCS2B01G195200 chr2B 100.000 30 0 0 3543 3572 172675200 172675229 1.000000e-03 56.5
13 TraesCS2B01G195200 chr2A 95.301 6938 202 49 745 7612 123130217 123137100 0.000000e+00 10892.0
14 TraesCS2B01G195200 chr2A 89.263 1248 113 13 6371 7612 123205274 123206506 0.000000e+00 1543.0
15 TraesCS2B01G195200 chr2A 87.648 761 83 9 6853 7610 123214371 123215123 0.000000e+00 874.0
16 TraesCS2B01G195200 chr2A 87.873 503 53 8 6373 6874 123213859 123214354 1.250000e-162 584.0
17 TraesCS2B01G195200 chr2A 96.569 204 5 2 7705 7908 123137303 123137504 3.850000e-88 337.0
18 TraesCS2B01G195200 chr2A 89.583 240 13 1 7918 8145 733537472 733537711 2.350000e-75 294.0
19 TraesCS2B01G195200 chr2A 91.089 202 13 2 7917 8113 13111343 13111544 1.430000e-67 268.0
20 TraesCS2B01G195200 chr2A 87.831 189 21 2 7734 7921 123206693 123206880 4.050000e-53 220.0
21 TraesCS2B01G195200 chr2A 96.552 58 2 0 7627 7684 123137189 123137246 7.120000e-16 97.1
22 TraesCS2B01G195200 chr2A 96.970 33 1 0 7665 7697 123137247 123137279 1.000000e-03 56.5
23 TraesCS2B01G195200 chr2D 95.744 6790 171 50 890 7612 119944888 119951626 0.000000e+00 10829.0
24 TraesCS2B01G195200 chr2D 89.286 1260 115 13 6363 7612 119970745 119971994 0.000000e+00 1561.0
25 TraesCS2B01G195200 chr2D 89.070 613 61 4 6999 7610 120026798 120027405 0.000000e+00 756.0
26 TraesCS2B01G195200 chr2D 88.365 636 51 8 6373 6992 120026133 120026761 0.000000e+00 743.0
27 TraesCS2B01G195200 chr2D 86.047 258 33 3 489 745 445315057 445314802 3.060000e-69 274.0
28 TraesCS2B01G195200 chr2D 87.917 240 16 8 8142 8381 119953994 119954220 3.960000e-68 270.0
29 TraesCS2B01G195200 chr2D 87.273 165 4 7 7665 7813 119951773 119951936 1.150000e-38 172.0
30 TraesCS2B01G195200 chr2D 90.323 124 4 6 7806 7922 119953873 119953995 1.160000e-33 156.0
31 TraesCS2B01G195200 chr2D 98.214 56 1 0 7629 7684 119951717 119951772 1.980000e-16 99.0
32 TraesCS2B01G195200 chr2D 100.000 30 0 0 3656 3685 119947566 119947595 1.000000e-03 56.5
33 TraesCS2B01G195200 chr2D 100.000 30 0 0 3543 3572 119947681 119947710 1.000000e-03 56.5
34 TraesCS2B01G195200 chr3B 98.656 744 10 0 1 744 243274604 243275347 0.000000e+00 1319.0
35 TraesCS2B01G195200 chr3B 74.265 272 53 15 6544 6805 461304080 461304344 1.980000e-16 99.0
36 TraesCS2B01G195200 chrUn 93.732 351 20 1 1 349 23733635 23733285 7.660000e-145 525.0
37 TraesCS2B01G195200 chrUn 94.595 37 2 0 8379 8415 455664797 455664833 3.360000e-04 58.4
38 TraesCS2B01G195200 chr4B 81.333 525 71 20 241 744 343042583 343042065 1.350000e-107 401.0
39 TraesCS2B01G195200 chr6B 81.301 492 64 19 274 746 113442097 113442579 2.940000e-99 374.0
40 TraesCS2B01G195200 chr6B 87.259 259 19 3 7899 8144 437164910 437165167 5.090000e-72 283.0
41 TraesCS2B01G195200 chr5D 89.492 295 27 4 454 744 470055234 470055528 3.800000e-98 370.0
42 TraesCS2B01G195200 chr5D 89.787 235 12 1 7921 8143 129481579 129481345 3.040000e-74 291.0
43 TraesCS2B01G195200 chr5D 89.583 96 7 2 371 466 550554103 550554195 1.520000e-22 119.0
44 TraesCS2B01G195200 chr5D 89.773 88 8 1 371 458 470055088 470055174 2.540000e-20 111.0
45 TraesCS2B01G195200 chr5D 85.965 57 6 1 8356 8410 544622437 544622493 9.340000e-05 60.2
46 TraesCS2B01G195200 chr5D 100.000 31 0 0 8351 8381 520064471 520064501 3.360000e-04 58.4
47 TraesCS2B01G195200 chr5D 100.000 29 0 0 8355 8383 66982616 66982644 4.000000e-03 54.7
48 TraesCS2B01G195200 chr5D 100.000 29 0 0 8355 8383 388111040 388111012 4.000000e-03 54.7
49 TraesCS2B01G195200 chr7A 80.537 447 74 8 6303 6747 21612875 21613310 1.790000e-86 331.0
50 TraesCS2B01G195200 chr7A 93.151 73 5 0 8541 8613 46242072 46242144 3.290000e-19 108.0
51 TraesCS2B01G195200 chr7A 96.000 50 1 1 8359 8408 27288048 27288000 7.170000e-11 80.5
52 TraesCS2B01G195200 chr5A 92.105 228 13 2 7921 8143 705145575 705145348 5.020000e-82 316.0
53 TraesCS2B01G195200 chr6D 91.139 237 9 3 7919 8143 413721166 413720930 2.340000e-80 311.0
54 TraesCS2B01G195200 chr7D 90.638 235 10 1 7921 8143 45145725 45145491 1.410000e-77 302.0
55 TraesCS2B01G195200 chr7D 87.218 266 28 6 483 744 104618090 104617827 1.820000e-76 298.0
56 TraesCS2B01G195200 chr7D 87.952 249 17 2 7911 8147 140312523 140312770 1.830000e-71 281.0
57 TraesCS2B01G195200 chr7D 87.952 249 17 2 7911 8147 140313684 140313931 1.830000e-71 281.0
58 TraesCS2B01G195200 chr7D 87.550 249 18 2 7911 8147 140313038 140313285 8.520000e-70 276.0
59 TraesCS2B01G195200 chr7D 87.550 249 18 2 7911 8147 140314329 140314576 8.520000e-70 276.0
60 TraesCS2B01G195200 chr7D 80.952 105 20 0 7124 7228 635844799 635844695 5.540000e-12 84.2
61 TraesCS2B01G195200 chr4D 89.796 245 12 4 7918 8150 64665079 64665322 1.410000e-77 302.0
62 TraesCS2B01G195200 chr4D 97.143 35 1 0 8379 8413 297929006 297928972 9.340000e-05 60.2
63 TraesCS2B01G195200 chr1B 89.256 242 14 1 7921 8150 24633971 24633730 8.460000e-75 292.0
64 TraesCS2B01G195200 chr1B 97.059 34 1 0 8379 8412 339366415 339366448 3.360000e-04 58.4
65 TraesCS2B01G195200 chr1A 89.286 224 21 2 7921 8143 513246870 513246649 2.370000e-70 278.0
66 TraesCS2B01G195200 chr5B 83.333 276 41 5 470 744 430265866 430266137 5.160000e-62 250.0
67 TraesCS2B01G195200 chr5B 91.045 67 6 0 8549 8615 419304230 419304296 3.310000e-14 91.6
68 TraesCS2B01G195200 chr7B 87.013 77 10 0 8539 8615 125066600 125066676 4.280000e-13 87.9
69 TraesCS2B01G195200 chr7B 100.000 33 0 0 8379 8411 361171505 361171473 2.600000e-05 62.1
70 TraesCS2B01G195200 chr4A 90.909 55 0 1 8360 8409 692928151 692928205 1.550000e-07 69.4
71 TraesCS2B01G195200 chr4A 94.595 37 2 0 8379 8415 741283563 741283527 3.360000e-04 58.4
72 TraesCS2B01G195200 chr4A 100.000 30 0 0 8354 8383 58913239 58913210 1.000000e-03 56.5
73 TraesCS2B01G195200 chr1D 100.000 32 0 0 8379 8410 75817835 75817866 9.340000e-05 60.2
74 TraesCS2B01G195200 chr1D 100.000 28 0 0 8356 8383 100882896 100882923 1.600000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G195200 chr2B 172671545 172680159 8614 False 15910.000000 15910 100.000000 1 8615 1 chr2B.!!$F1 8614
1 TraesCS2B01G195200 chr2B 618052898 618053642 744 True 1343.000000 1343 99.195000 1 745 1 chr2B.!!$R1 744
2 TraesCS2B01G195200 chr2B 172804517 172805473 956 False 1068.000000 1068 86.970000 6373 7328 1 chr2B.!!$F2 955
3 TraesCS2B01G195200 chr2B 781262574 781263360 786 False 576.000000 734 93.698000 1 749 2 chr2B.!!$F7 748
4 TraesCS2B01G195200 chr2B 172686728 172688375 1647 False 474.333333 649 87.512333 6363 7921 3 chr2B.!!$F5 1558
5 TraesCS2B01G195200 chr2B 731249499 731250052 553 False 383.000000 383 80.174000 200 744 1 chr2B.!!$F3 544
6 TraesCS2B01G195200 chr2A 123130217 123137504 7287 False 2845.650000 10892 96.348000 745 7908 4 chr2A.!!$F3 7163
7 TraesCS2B01G195200 chr2A 123205274 123206880 1606 False 881.500000 1543 88.547000 6371 7921 2 chr2A.!!$F4 1550
8 TraesCS2B01G195200 chr2A 123213859 123215123 1264 False 729.000000 874 87.760500 6373 7610 2 chr2A.!!$F5 1237
9 TraesCS2B01G195200 chr2D 119944888 119951626 6738 False 10829.000000 10829 95.744000 890 7612 1 chr2D.!!$F1 6722
10 TraesCS2B01G195200 chr2D 119970745 119971994 1249 False 1561.000000 1561 89.286000 6363 7612 1 chr2D.!!$F2 1249
11 TraesCS2B01G195200 chr2D 120026133 120027405 1272 False 749.500000 756 88.717500 6373 7610 2 chr2D.!!$F5 1237
12 TraesCS2B01G195200 chr3B 243274604 243275347 743 False 1319.000000 1319 98.656000 1 744 1 chr3B.!!$F1 743
13 TraesCS2B01G195200 chr4B 343042065 343042583 518 True 401.000000 401 81.333000 241 744 1 chr4B.!!$R1 503
14 TraesCS2B01G195200 chr7D 140312523 140314576 2053 False 278.500000 281 87.751000 7911 8147 4 chr7D.!!$F1 236

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
870 980 0.321298 TTGCTAGGGAAACGGTCAGC 60.321 55.000 0.00 0.00 0.00 4.26 F
1795 1924 0.178068 GCGAGCCCTGGATTTGTAGA 59.822 55.000 0.00 0.00 0.00 2.59 F
2181 2321 0.035056 CGATTGGTTTCCAGAGGCCT 60.035 55.000 3.86 3.86 33.81 5.19 F
3029 3176 0.036577 CAGCAGTTCCTCAGTGGGAG 60.037 60.000 0.00 0.00 43.65 4.30 F
3370 3519 3.247648 CCTCGCTTAATTCATGGTTACGG 59.752 47.826 0.00 0.00 0.00 4.02 F
3899 4053 1.376037 CCTTTCTGACAGGGACCGC 60.376 63.158 1.81 0.00 0.00 5.68 F
5491 5672 0.035725 TGAAGCATGCTCACCAGAGG 60.036 55.000 22.93 0.00 42.33 3.69 F
6078 6261 0.994995 CCGTTCATCTTCTGACAGCG 59.005 55.000 0.00 0.00 32.17 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1889 2026 0.108851 TCCGTGACATCGTGTCCATG 60.109 55.000 13.24 8.29 46.40 3.66 R
3029 3176 0.798776 CTGTGGAGAATCACGTTGCC 59.201 55.000 0.00 0.00 40.31 4.52 R
3463 3612 0.916809 ACATGGGTTGGGTAGTAGCC 59.083 55.000 11.65 11.65 36.00 3.93 R
3855 4009 1.570857 TTGGGGTCGGCATTCCTCAT 61.571 55.000 0.00 0.00 33.91 2.90 R
5263 5443 2.014335 TCGACTCCATCAATGTGCAG 57.986 50.000 0.00 0.00 0.00 4.41 R
5842 6024 1.676006 AGAAAAAGGTGACTGCCAACG 59.324 47.619 0.00 0.00 42.68 4.10 R
6835 7025 0.396811 GTGAGGCACACTTACCAGGT 59.603 55.000 7.87 0.00 45.13 4.00 R
7617 7897 0.038744 CTCCCATGAACAAGCCACCT 59.961 55.000 0.00 0.00 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
694 804 3.062774 CGTGATTTTTGGCAAAAACGGTT 59.937 39.130 33.32 21.15 42.57 4.44
751 861 6.361748 GCTTTCAGCAATTTACTCTGTTTCTG 59.638 38.462 0.00 0.00 41.89 3.02
765 875 1.978782 GTTTCTGCTGCCGAAAAATCG 59.021 47.619 18.62 0.00 32.71 3.34
845 955 0.606401 CATCTGGCCCACGTTTCAGT 60.606 55.000 0.00 0.00 0.00 3.41
852 962 1.663695 CCCACGTTTCAGTGAGTGTT 58.336 50.000 9.42 0.00 44.43 3.32
870 980 0.321298 TTGCTAGGGAAACGGTCAGC 60.321 55.000 0.00 0.00 0.00 4.26
875 985 2.747686 GGAAACGGTCAGCAGGGA 59.252 61.111 0.00 0.00 0.00 4.20
1163 1292 1.673665 CTGGTGCTCCAACTCCAGC 60.674 63.158 9.14 0.00 42.54 4.85
1191 1320 1.060937 GTACAATCAGCAAGCGCCG 59.939 57.895 2.29 0.00 39.83 6.46
1445 1574 3.003763 GGCTCTTCGTCCCCCTGT 61.004 66.667 0.00 0.00 0.00 4.00
1448 1577 1.545706 GCTCTTCGTCCCCCTGTTCT 61.546 60.000 0.00 0.00 0.00 3.01
1541 1670 4.329545 GAGCAAGTCGGTGGCCCA 62.330 66.667 0.00 0.00 0.00 5.36
1728 1857 5.810074 AGTGGTTCTGTTACATTTGTTTTGC 59.190 36.000 0.00 0.00 0.00 3.68
1795 1924 0.178068 GCGAGCCCTGGATTTGTAGA 59.822 55.000 0.00 0.00 0.00 2.59
1867 2004 7.970614 GGTTGTTTCCATAGATGAGTTTCATTC 59.029 37.037 0.00 0.00 37.20 2.67
1873 2010 7.222161 TCCATAGATGAGTTTCATTCCTGATG 58.778 38.462 0.00 0.00 37.20 3.07
1875 2012 7.388224 CCATAGATGAGTTTCATTCCTGATGAG 59.612 40.741 0.00 0.00 45.15 2.90
1889 2026 4.054671 CCTGATGAGAGTTCGGCTAATTC 58.945 47.826 0.00 0.00 0.00 2.17
1967 2107 1.226688 GACGCGCAGATCTAGTGCA 60.227 57.895 22.05 0.00 42.36 4.57
2055 2195 2.931325 ACACATTTGCTTTGTGCTGTTG 59.069 40.909 12.23 0.00 46.65 3.33
2151 2291 4.717991 GCAACAGTGCGATGTACATTTAA 58.282 39.130 10.30 0.00 41.93 1.52
2181 2321 0.035056 CGATTGGTTTCCAGAGGCCT 60.035 55.000 3.86 3.86 33.81 5.19
2219 2359 3.211045 TCCGTTGGTTTCTCTTTTCCTG 58.789 45.455 0.00 0.00 0.00 3.86
2253 2393 4.202111 ACTTTTTACACGCTGCCATTTCTT 60.202 37.500 0.00 0.00 0.00 2.52
2264 2404 3.122297 TGCCATTTCTTGCAAAAGTTCG 58.878 40.909 0.00 0.00 33.87 3.95
2316 2458 1.248785 TTTCTGGAGGGAGGACGTCG 61.249 60.000 9.92 0.00 34.85 5.12
2317 2459 2.361357 CTGGAGGGAGGACGTCGT 60.361 66.667 11.12 11.12 34.85 4.34
2318 2460 2.360852 TGGAGGGAGGACGTCGTC 60.361 66.667 26.08 26.08 34.85 4.20
2660 2807 2.224992 TGCAATTACTCCTGAGCCCAAA 60.225 45.455 0.00 0.00 0.00 3.28
2679 2826 3.485463 AAACAAGACGGATCAACAGGA 57.515 42.857 0.00 0.00 0.00 3.86
2684 2831 3.533606 AGACGGATCAACAGGATTCTG 57.466 47.619 0.00 0.00 46.10 3.02
2923 3070 5.180117 GCTAATTCACACTTTTCTGCTCTGA 59.820 40.000 0.00 0.00 0.00 3.27
2926 3073 4.077300 TCACACTTTTCTGCTCTGACAT 57.923 40.909 0.00 0.00 0.00 3.06
2974 3121 3.753294 ACAGTGAGTACAAGGTCAAGG 57.247 47.619 0.00 0.00 0.00 3.61
2979 3126 4.163458 AGTGAGTACAAGGTCAAGGTTCAA 59.837 41.667 0.00 0.00 0.00 2.69
3029 3176 0.036577 CAGCAGTTCCTCAGTGGGAG 60.037 60.000 0.00 0.00 43.65 4.30
3166 3313 7.040201 ACTGCTGACTTTGTTTAATGTGATCAT 60.040 33.333 0.00 0.00 35.59 2.45
3332 3481 3.858877 GCCTCTCACTGAATATAGGTGCG 60.859 52.174 0.00 0.00 0.00 5.34
3337 3486 7.050970 TCTCACTGAATATAGGTGCGTATTT 57.949 36.000 0.00 0.00 0.00 1.40
3352 3501 3.817238 CGTATTTGTTCAAAACCCCTCG 58.183 45.455 2.11 0.00 0.00 4.63
3370 3519 3.247648 CCTCGCTTAATTCATGGTTACGG 59.752 47.826 0.00 0.00 0.00 4.02
3531 3680 5.163152 ACCTGGGTTATCCAAATTTGCAAAA 60.163 36.000 17.19 0.00 46.51 2.44
3693 3844 9.520204 CAAGTCAACTACTGAACAAATTTGATT 57.480 29.630 24.64 14.18 38.88 2.57
3730 3884 9.313118 GTTTTAAGGTGAACACAGATTCATTTT 57.687 29.630 7.25 0.00 40.60 1.82
3764 3918 7.743116 TTTCCACAGGGTTATCACTTCTATA 57.257 36.000 0.00 0.00 34.93 1.31
3802 3956 8.687292 ACTTGTTGTGCAGATATATCATCAAT 57.313 30.769 15.08 0.00 0.00 2.57
3899 4053 1.376037 CCTTTCTGACAGGGACCGC 60.376 63.158 1.81 0.00 0.00 5.68
3960 4115 6.254281 ACAAAATGTTTATCGCAACTAGCT 57.746 33.333 0.00 0.00 42.61 3.32
4362 4520 6.493116 CAAATGTGGAAGTCTGCTAATGATC 58.507 40.000 0.00 0.00 0.00 2.92
4470 4628 3.271706 CTACGTGCGAACGTCCCCA 62.272 63.158 27.86 7.02 45.81 4.96
4801 4960 4.940905 TTTACCCCCTGTTTTTGTTAGC 57.059 40.909 0.00 0.00 0.00 3.09
4808 4967 6.100569 ACCCCCTGTTTTTGTTAGCTAATTTT 59.899 34.615 9.88 0.00 0.00 1.82
4906 5065 3.181483 GGAACATGATTGGCAAGGTGATC 60.181 47.826 5.96 8.26 0.00 2.92
5030 5209 6.562640 CGCACAAACAGAAAATTCTTGGATTG 60.563 38.462 0.00 0.00 34.74 2.67
5099 5279 3.248043 TGAGCTACACAATGTGGGC 57.752 52.632 18.37 19.32 37.94 5.36
5115 5295 3.118038 TGTGGGCGCTTATTCCTTCTATT 60.118 43.478 7.64 0.00 0.00 1.73
5263 5443 4.016113 ACTTGCTTGAACTTTTCACGTC 57.984 40.909 0.00 0.00 39.87 4.34
5281 5461 1.662629 GTCTGCACATTGATGGAGTCG 59.337 52.381 0.00 0.00 39.00 4.18
5386 5567 4.810491 CCATATCATCATTCACGTCACACA 59.190 41.667 0.00 0.00 0.00 3.72
5422 5603 8.281212 TCAATCTTTAGGTTTTCAATCCTAGC 57.719 34.615 0.00 0.00 37.57 3.42
5491 5672 0.035725 TGAAGCATGCTCACCAGAGG 60.036 55.000 22.93 0.00 42.33 3.69
5515 5696 2.420687 CCCTGACCTCCAGTTGCTTATC 60.421 54.545 0.00 0.00 41.33 1.75
5697 5879 6.562608 ACCTTGTCTCATGGTACCCATATATT 59.437 38.462 10.07 0.00 43.15 1.28
5753 5935 3.130693 GCGAGACTGACCTTGGTATAGTT 59.869 47.826 9.54 2.76 0.00 2.24
5842 6024 2.863809 AGTCAATGTCAAGGTGGGTTC 58.136 47.619 0.00 0.00 0.00 3.62
5865 6047 2.297701 TGGCAGTCACCTTTTTCTGTC 58.702 47.619 0.00 0.00 33.79 3.51
5976 6159 3.609807 GTCAAATACCGTTAGTCACCGAC 59.390 47.826 0.00 0.00 0.00 4.79
5977 6160 3.255395 TCAAATACCGTTAGTCACCGACA 59.745 43.478 0.00 0.00 34.60 4.35
5979 6162 2.995466 TACCGTTAGTCACCGACAAG 57.005 50.000 0.00 0.00 34.60 3.16
6021 6204 2.125269 GTAACACATCCGGCGGCT 60.125 61.111 23.83 9.44 0.00 5.52
6033 6216 2.512896 GCGGCTGGGGATGATTCT 59.487 61.111 0.00 0.00 0.00 2.40
6078 6261 0.994995 CCGTTCATCTTCTGACAGCG 59.005 55.000 0.00 0.00 32.17 5.18
6092 6275 2.543848 TGACAGCGATTGTTCACTTGAC 59.456 45.455 0.00 0.00 41.05 3.18
6093 6276 1.526887 ACAGCGATTGTTCACTTGACG 59.473 47.619 0.00 0.00 36.31 4.35
6289 6472 9.153721 GGAGATTATTCAAGATCTCTATTGCAG 57.846 37.037 11.73 0.00 44.84 4.41
6402 6585 5.751509 GGTTCTAAAACCGCAACATTTTCTT 59.248 36.000 0.00 0.00 45.33 2.52
6426 6609 4.160439 CAGGGAGTTGCTAGTGTCATTCTA 59.840 45.833 0.00 0.00 0.00 2.10
6835 7025 4.069304 CCGACAAAAGTGGAAACATCCTA 58.931 43.478 0.00 0.00 46.14 2.94
6885 7131 6.200854 CGAACACATGCACAGTATACATACAT 59.799 38.462 5.50 0.64 35.74 2.29
6887 7133 5.759763 ACACATGCACAGTATACATACATGG 59.240 40.000 21.74 16.09 35.74 3.66
7170 7448 4.256920 CCATGTCCTCTTCGATGAAAACT 58.743 43.478 2.36 0.00 0.00 2.66
7171 7449 4.331168 CCATGTCCTCTTCGATGAAAACTC 59.669 45.833 2.36 0.00 0.00 3.01
7394 7673 3.815962 GGTGAGTTTCTTCTCCAAGTTCC 59.184 47.826 0.00 0.00 33.93 3.62
7624 7982 2.422093 GGAGCTGCTTAATTAGGTGGCT 60.422 50.000 2.53 13.13 0.00 4.75
7625 7983 3.282885 GAGCTGCTTAATTAGGTGGCTT 58.717 45.455 2.53 3.47 0.00 4.35
7697 8075 1.619654 TTGCTGGGAACTTGTGATGG 58.380 50.000 0.00 0.00 0.00 3.51
7699 8077 1.702401 TGCTGGGAACTTGTGATGGTA 59.298 47.619 0.00 0.00 0.00 3.25
7700 8078 2.107378 TGCTGGGAACTTGTGATGGTAA 59.893 45.455 0.00 0.00 0.00 2.85
7702 8080 3.572255 GCTGGGAACTTGTGATGGTAAAA 59.428 43.478 0.00 0.00 0.00 1.52
7781 8189 2.978156 TGAAGGGAATCAAACAGGCT 57.022 45.000 0.00 0.00 0.00 4.58
7795 8203 7.465353 TCAAACAGGCTTTTCAATATGATGA 57.535 32.000 0.00 0.00 0.00 2.92
7929 8340 9.975218 AAATAGTTCAAACATATTACTCCCACT 57.025 29.630 0.00 0.00 0.00 4.00
7986 8409 5.928976 TGGTATCTATTGGTTGTGAGATGG 58.071 41.667 0.00 0.00 31.25 3.51
7995 8418 4.415596 TGGTTGTGAGATGGGCTAAAAAT 58.584 39.130 0.00 0.00 0.00 1.82
8007 8430 5.964758 TGGGCTAAAAATTAGCATTCACAG 58.035 37.500 20.18 0.00 42.06 3.66
8010 8433 6.972901 GGGCTAAAAATTAGCATTCACAGTAC 59.027 38.462 20.18 2.92 42.06 2.73
8027 8450 6.146021 TCACAGTACGCATGCATATAGAAATG 59.854 38.462 19.57 0.00 0.00 2.32
8031 8454 5.862924 ACGCATGCATATAGAAATGGTAC 57.137 39.130 19.57 0.00 0.00 3.34
8050 8473 5.242393 TGGTACATCGGAGTACTAATTAGCC 59.758 44.000 12.54 4.75 43.01 3.93
8070 8493 6.780457 AGCCACTAGAAATAAATGCAATGT 57.220 33.333 0.00 0.00 0.00 2.71
8090 8513 4.331968 TGTGCCCTAAACCTTGTCTATTG 58.668 43.478 0.00 0.00 0.00 1.90
8107 8530 4.626225 GTGGAAACGCACGCAAAT 57.374 50.000 0.00 0.00 41.67 2.32
8114 9052 4.220572 GGAAACGCACGCAAATTTAACTA 58.779 39.130 0.00 0.00 0.00 2.24
8133 9071 5.483685 ACTATGCCTTCTAAACTGTGACA 57.516 39.130 0.00 0.00 0.00 3.58
8143 9081 5.580998 TCTAAACTGTGACAGAGGGAGTAT 58.419 41.667 20.97 0.00 35.18 2.12
8147 9085 3.261897 ACTGTGACAGAGGGAGTATTTGG 59.738 47.826 20.97 0.00 35.18 3.28
8148 9086 3.515502 CTGTGACAGAGGGAGTATTTGGA 59.484 47.826 6.79 0.00 32.44 3.53
8150 9088 5.277250 TGTGACAGAGGGAGTATTTGGATA 58.723 41.667 0.00 0.00 0.00 2.59
8151 9089 5.724370 TGTGACAGAGGGAGTATTTGGATAA 59.276 40.000 0.00 0.00 0.00 1.75
8152 9090 6.386927 TGTGACAGAGGGAGTATTTGGATAAT 59.613 38.462 0.00 0.00 0.00 1.28
8153 9091 6.708054 GTGACAGAGGGAGTATTTGGATAATG 59.292 42.308 0.00 0.00 0.00 1.90
8154 9092 5.625150 ACAGAGGGAGTATTTGGATAATGC 58.375 41.667 0.00 0.00 0.00 3.56
8155 9093 5.132648 ACAGAGGGAGTATTTGGATAATGCA 59.867 40.000 0.00 0.00 0.00 3.96
8156 9094 6.064060 CAGAGGGAGTATTTGGATAATGCAA 58.936 40.000 0.00 0.00 0.00 4.08
8158 9096 7.232127 CAGAGGGAGTATTTGGATAATGCAATT 59.768 37.037 0.00 0.00 41.28 2.32
8159 9097 7.232127 AGAGGGAGTATTTGGATAATGCAATTG 59.768 37.037 0.00 0.00 36.99 2.32
8160 9098 6.840705 AGGGAGTATTTGGATAATGCAATTGT 59.159 34.615 7.40 0.00 36.99 2.71
8161 9099 7.345392 AGGGAGTATTTGGATAATGCAATTGTT 59.655 33.333 7.40 0.00 36.99 2.83
8164 9102 8.633075 AGTATTTGGATAATGCAATTGTTTCG 57.367 30.769 7.40 0.00 36.99 3.46
8165 9103 6.907206 ATTTGGATAATGCAATTGTTTCGG 57.093 33.333 7.40 0.00 36.99 4.30
8167 9105 4.742417 TGGATAATGCAATTGTTTCGGTG 58.258 39.130 7.40 0.00 36.99 4.94
8168 9106 3.551485 GGATAATGCAATTGTTTCGGTGC 59.449 43.478 7.40 0.00 36.99 5.01
8170 9108 3.566273 TGCAATTGTTTCGGTGCAG 57.434 47.368 7.40 0.00 41.85 4.41
8171 9109 1.028130 TGCAATTGTTTCGGTGCAGA 58.972 45.000 7.40 0.00 41.85 4.26
8172 9110 1.001487 TGCAATTGTTTCGGTGCAGAG 60.001 47.619 7.40 0.00 41.85 3.35
8173 9111 1.689959 CAATTGTTTCGGTGCAGAGC 58.310 50.000 0.00 0.00 0.00 4.09
8174 9112 1.001487 CAATTGTTTCGGTGCAGAGCA 60.001 47.619 0.00 0.00 35.60 4.26
8185 9123 1.662517 TGCAGAGCACTCAACGAAAA 58.337 45.000 0.00 0.00 31.71 2.29
8205 9143 2.873133 AATAGCGTAGAGACAGTGGC 57.127 50.000 0.00 0.00 0.00 5.01
8206 9144 1.763968 ATAGCGTAGAGACAGTGGCA 58.236 50.000 0.00 0.00 0.00 4.92
8207 9145 1.095600 TAGCGTAGAGACAGTGGCAG 58.904 55.000 0.00 0.00 0.00 4.85
8208 9146 1.807573 GCGTAGAGACAGTGGCAGC 60.808 63.158 0.00 0.00 0.00 5.25
8209 9147 1.515088 CGTAGAGACAGTGGCAGCG 60.515 63.158 0.00 0.00 0.00 5.18
8210 9148 1.587054 GTAGAGACAGTGGCAGCGT 59.413 57.895 0.00 0.00 0.00 5.07
8211 9149 0.456995 GTAGAGACAGTGGCAGCGTC 60.457 60.000 0.00 7.91 0.00 5.19
8212 9150 0.609406 TAGAGACAGTGGCAGCGTCT 60.609 55.000 16.38 16.38 42.58 4.18
8213 9151 1.005630 GAGACAGTGGCAGCGTCTT 60.006 57.895 17.21 4.63 40.04 3.01
8214 9152 1.005630 AGACAGTGGCAGCGTCTTC 60.006 57.895 11.87 0.00 36.62 2.87
8215 9153 2.356313 ACAGTGGCAGCGTCTTCG 60.356 61.111 0.00 0.00 40.37 3.79
8217 9155 1.956170 CAGTGGCAGCGTCTTCGTT 60.956 57.895 0.00 0.00 39.49 3.85
8220 9158 0.370273 GTGGCAGCGTCTTCGTTATG 59.630 55.000 0.00 0.00 39.49 1.90
8221 9159 1.348594 GGCAGCGTCTTCGTTATGC 59.651 57.895 0.00 0.00 39.97 3.14
8222 9160 1.084370 GGCAGCGTCTTCGTTATGCT 61.084 55.000 11.59 0.00 40.27 3.79
8223 9161 0.299003 GCAGCGTCTTCGTTATGCTC 59.701 55.000 0.00 0.00 37.09 4.26
8225 9163 1.992667 CAGCGTCTTCGTTATGCTCAA 59.007 47.619 0.00 0.00 37.09 3.02
8226 9164 1.993370 AGCGTCTTCGTTATGCTCAAC 59.007 47.619 0.00 0.00 34.02 3.18
8227 9165 1.724623 GCGTCTTCGTTATGCTCAACA 59.275 47.619 2.64 0.00 39.49 3.33
8229 9167 3.782250 GCGTCTTCGTTATGCTCAACATG 60.782 47.826 0.00 0.00 38.29 3.21
8230 9168 3.612423 CGTCTTCGTTATGCTCAACATGA 59.388 43.478 0.00 0.00 40.06 3.07
8231 9169 4.268644 CGTCTTCGTTATGCTCAACATGAT 59.731 41.667 0.00 0.00 40.06 2.45
8233 9171 6.345329 CGTCTTCGTTATGCTCAACATGATAG 60.345 42.308 0.00 0.00 40.06 2.08
8235 9173 6.476706 TCTTCGTTATGCTCAACATGATAGTG 59.523 38.462 0.00 0.00 40.06 2.74
8236 9174 5.660460 TCGTTATGCTCAACATGATAGTGT 58.340 37.500 0.00 0.00 40.06 3.55
8237 9175 5.519927 TCGTTATGCTCAACATGATAGTGTG 59.480 40.000 0.00 0.00 40.06 3.82
8238 9176 5.505286 GTTATGCTCAACATGATAGTGTGC 58.495 41.667 0.00 5.27 40.06 4.57
8240 9178 4.470334 TGCTCAACATGATAGTGTGCTA 57.530 40.909 0.00 0.00 31.49 3.49
8241 9179 4.831107 TGCTCAACATGATAGTGTGCTAA 58.169 39.130 0.00 0.00 31.49 3.09
8242 9180 5.244755 TGCTCAACATGATAGTGTGCTAAA 58.755 37.500 0.00 0.00 31.49 1.85
8244 9182 6.183360 TGCTCAACATGATAGTGTGCTAAATG 60.183 38.462 0.00 0.00 34.31 2.32
8247 9185 8.785329 TCAACATGATAGTGTGCTAAATGTAA 57.215 30.769 0.00 0.00 37.47 2.41
8248 9186 8.664798 TCAACATGATAGTGTGCTAAATGTAAC 58.335 33.333 0.00 0.00 37.47 2.50
8249 9187 7.553881 ACATGATAGTGTGCTAAATGTAACC 57.446 36.000 0.00 0.00 37.07 2.85
8250 9188 6.542370 ACATGATAGTGTGCTAAATGTAACCC 59.458 38.462 0.00 0.00 37.07 4.11
8251 9189 6.056090 TGATAGTGTGCTAAATGTAACCCA 57.944 37.500 0.00 0.00 0.00 4.51
8252 9190 6.477253 TGATAGTGTGCTAAATGTAACCCAA 58.523 36.000 0.00 0.00 0.00 4.12
8254 9192 7.448777 TGATAGTGTGCTAAATGTAACCCAAAA 59.551 33.333 0.00 0.00 0.00 2.44
8255 9193 6.472686 AGTGTGCTAAATGTAACCCAAAAA 57.527 33.333 0.00 0.00 0.00 1.94
8256 9194 7.061566 AGTGTGCTAAATGTAACCCAAAAAT 57.938 32.000 0.00 0.00 0.00 1.82
8258 9196 8.643324 AGTGTGCTAAATGTAACCCAAAAATAA 58.357 29.630 0.00 0.00 0.00 1.40
8259 9197 9.262358 GTGTGCTAAATGTAACCCAAAAATAAA 57.738 29.630 0.00 0.00 0.00 1.40
8260 9198 9.482627 TGTGCTAAATGTAACCCAAAAATAAAG 57.517 29.630 0.00 0.00 0.00 1.85
8261 9199 8.931775 GTGCTAAATGTAACCCAAAAATAAAGG 58.068 33.333 0.00 0.00 0.00 3.11
8262 9200 8.871125 TGCTAAATGTAACCCAAAAATAAAGGA 58.129 29.630 0.00 0.00 0.00 3.36
8263 9201 9.884636 GCTAAATGTAACCCAAAAATAAAGGAT 57.115 29.630 0.00 0.00 0.00 3.24
8269 9207 9.549078 TGTAACCCAAAAATAAAGGATTTCAAC 57.451 29.630 0.00 0.00 40.09 3.18
8270 9208 9.549078 GTAACCCAAAAATAAAGGATTTCAACA 57.451 29.630 0.00 0.00 40.09 3.33
8271 9209 8.445275 AACCCAAAAATAAAGGATTTCAACAC 57.555 30.769 0.00 0.00 40.09 3.32
8272 9210 6.704050 ACCCAAAAATAAAGGATTTCAACACG 59.296 34.615 0.00 0.00 40.09 4.49
8273 9211 6.926272 CCCAAAAATAAAGGATTTCAACACGA 59.074 34.615 0.00 0.00 40.09 4.35
8274 9212 7.439655 CCCAAAAATAAAGGATTTCAACACGAA 59.560 33.333 0.00 0.00 40.09 3.85
8275 9213 8.987890 CCAAAAATAAAGGATTTCAACACGAAT 58.012 29.630 0.00 0.00 40.09 3.34
8276 9214 9.796062 CAAAAATAAAGGATTTCAACACGAATG 57.204 29.630 0.00 0.00 40.09 2.67
8277 9215 9.541143 AAAAATAAAGGATTTCAACACGAATGT 57.459 25.926 0.00 0.00 40.09 2.71
8313 9251 6.899393 AAAAACATAGAAGCCTGACATCAA 57.101 33.333 0.00 0.00 0.00 2.57
8314 9252 7.472334 AAAAACATAGAAGCCTGACATCAAT 57.528 32.000 0.00 0.00 0.00 2.57
8316 9254 8.579850 AAAACATAGAAGCCTGACATCAATAA 57.420 30.769 0.00 0.00 0.00 1.40
8317 9255 8.757982 AAACATAGAAGCCTGACATCAATAAT 57.242 30.769 0.00 0.00 0.00 1.28
8318 9256 9.851686 AAACATAGAAGCCTGACATCAATAATA 57.148 29.630 0.00 0.00 0.00 0.98
8319 9257 9.851686 AACATAGAAGCCTGACATCAATAATAA 57.148 29.630 0.00 0.00 0.00 1.40
8320 9258 9.277783 ACATAGAAGCCTGACATCAATAATAAC 57.722 33.333 0.00 0.00 0.00 1.89
8323 9261 8.388484 AGAAGCCTGACATCAATAATAACATC 57.612 34.615 0.00 0.00 0.00 3.06
8324 9262 8.216423 AGAAGCCTGACATCAATAATAACATCT 58.784 33.333 0.00 0.00 0.00 2.90
8325 9263 8.757982 AAGCCTGACATCAATAATAACATCTT 57.242 30.769 0.00 0.00 0.00 2.40
8326 9264 8.162878 AGCCTGACATCAATAATAACATCTTG 57.837 34.615 0.00 0.00 0.00 3.02
8328 9266 8.288208 GCCTGACATCAATAATAACATCTTGAG 58.712 37.037 0.00 0.00 31.69 3.02
8343 9281 3.374506 TGAGAATCAGATGCTGCCG 57.625 52.632 0.00 0.00 42.56 5.69
8344 9282 0.179065 TGAGAATCAGATGCTGCCGG 60.179 55.000 0.00 0.00 42.56 6.13
8345 9283 0.883814 GAGAATCAGATGCTGCCGGG 60.884 60.000 2.18 0.00 33.17 5.73
8348 9286 0.250640 AATCAGATGCTGCCGGGATC 60.251 55.000 2.18 0.00 42.13 3.36
8351 9289 2.031768 GATGCTGCCGGGATCTCC 59.968 66.667 2.18 0.00 39.30 3.71
8352 9290 2.769621 ATGCTGCCGGGATCTCCA 60.770 61.111 2.18 0.00 37.91 3.86
8353 9291 3.112205 ATGCTGCCGGGATCTCCAC 62.112 63.158 2.18 0.00 37.91 4.02
8355 9293 2.134287 GCTGCCGGGATCTCCACTA 61.134 63.158 2.18 0.00 37.91 2.74
8356 9294 1.686325 GCTGCCGGGATCTCCACTAA 61.686 60.000 2.18 0.00 37.91 2.24
8357 9295 1.051812 CTGCCGGGATCTCCACTAAT 58.948 55.000 2.18 0.00 37.91 1.73
8360 9298 2.632996 TGCCGGGATCTCCACTAATAAG 59.367 50.000 2.18 0.00 37.91 1.73
8374 9505 4.277921 CACTAATAAGTACTCCCTCCGTCC 59.722 50.000 0.00 0.00 33.48 4.79
8376 9507 1.002069 TAAGTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
8377 9508 0.338814 AAGTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
8378 9509 1.229131 AGTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
8379 9510 1.572415 AGTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
8381 9512 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
8382 9513 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
8383 9514 1.344763 CTCCCTCCGTCCCATAATGTC 59.655 57.143 0.00 0.00 0.00 3.06
8384 9515 1.062428 TCCCTCCGTCCCATAATGTCT 60.062 52.381 0.00 0.00 0.00 3.41
8385 9516 1.768870 CCCTCCGTCCCATAATGTCTT 59.231 52.381 0.00 0.00 0.00 3.01
8386 9517 2.969950 CCCTCCGTCCCATAATGTCTTA 59.030 50.000 0.00 0.00 0.00 2.10
8388 9519 3.386726 CCTCCGTCCCATAATGTCTTACA 59.613 47.826 0.00 0.00 0.00 2.41
8389 9520 4.040461 CCTCCGTCCCATAATGTCTTACAT 59.960 45.833 0.00 0.00 41.31 2.29
8408 9727 4.543689 ACATTATGAGACGGAGGGAGTAA 58.456 43.478 0.00 0.00 0.00 2.24
8410 9729 6.312529 ACATTATGAGACGGAGGGAGTAATA 58.687 40.000 0.00 0.00 0.00 0.98
8411 9730 6.781014 ACATTATGAGACGGAGGGAGTAATAA 59.219 38.462 0.00 0.00 0.00 1.40
8412 9731 7.455008 ACATTATGAGACGGAGGGAGTAATAAT 59.545 37.037 0.00 0.00 0.00 1.28
8414 9733 4.800023 TGAGACGGAGGGAGTAATAATCA 58.200 43.478 0.00 0.00 0.00 2.57
8415 9734 4.583489 TGAGACGGAGGGAGTAATAATCAC 59.417 45.833 0.00 0.00 0.00 3.06
8416 9735 4.805744 AGACGGAGGGAGTAATAATCACT 58.194 43.478 0.00 0.00 31.50 3.41
8417 9736 5.209659 AGACGGAGGGAGTAATAATCACTT 58.790 41.667 0.00 0.00 28.03 3.16
8419 9738 4.344390 ACGGAGGGAGTAATAATCACTTCC 59.656 45.833 0.00 0.00 41.45 3.46
8424 9743 5.059833 GGGAGTAATAATCACTTCCTGCAG 58.940 45.833 6.78 6.78 38.49 4.41
8425 9744 5.059833 GGAGTAATAATCACTTCCTGCAGG 58.940 45.833 27.87 27.87 0.00 4.85
8426 9745 4.455606 AGTAATAATCACTTCCTGCAGGC 58.544 43.478 28.91 8.96 34.44 4.85
8427 9746 2.355010 ATAATCACTTCCTGCAGGCC 57.645 50.000 28.91 0.00 34.44 5.19
8428 9747 0.991146 TAATCACTTCCTGCAGGCCA 59.009 50.000 28.91 15.76 34.44 5.36
8429 9748 0.333993 AATCACTTCCTGCAGGCCAT 59.666 50.000 28.91 12.24 34.44 4.40
8430 9749 0.395311 ATCACTTCCTGCAGGCCATG 60.395 55.000 28.91 22.86 34.44 3.66
8432 9751 0.035152 CACTTCCTGCAGGCCATGTA 60.035 55.000 28.91 6.68 34.44 2.29
8433 9752 0.698238 ACTTCCTGCAGGCCATGTAA 59.302 50.000 28.91 14.68 34.44 2.41
8434 9753 1.340405 ACTTCCTGCAGGCCATGTAAG 60.340 52.381 28.91 24.73 34.44 2.34
8436 9755 1.578897 TCCTGCAGGCCATGTAAGTA 58.421 50.000 28.91 3.28 34.44 2.24
8439 9758 2.555199 CTGCAGGCCATGTAAGTACTC 58.445 52.381 5.01 0.00 0.00 2.59
8440 9759 1.209504 TGCAGGCCATGTAAGTACTCC 59.790 52.381 5.01 0.00 0.00 3.85
8443 9762 3.535561 CAGGCCATGTAAGTACTCCAAG 58.464 50.000 5.01 0.00 0.00 3.61
8444 9763 3.055094 CAGGCCATGTAAGTACTCCAAGT 60.055 47.826 5.01 0.00 0.00 3.16
8445 9764 4.161565 CAGGCCATGTAAGTACTCCAAGTA 59.838 45.833 5.01 0.00 0.00 2.24
8446 9765 4.406003 AGGCCATGTAAGTACTCCAAGTAG 59.594 45.833 5.01 0.00 30.12 2.57
8447 9766 4.443034 GGCCATGTAAGTACTCCAAGTAGG 60.443 50.000 0.00 0.09 30.12 3.18
8448 9767 4.161754 GCCATGTAAGTACTCCAAGTAGGT 59.838 45.833 0.00 0.00 39.02 3.08
8450 9769 6.461231 GCCATGTAAGTACTCCAAGTAGGTAG 60.461 46.154 0.00 0.00 39.02 3.18
8452 9771 7.506261 CCATGTAAGTACTCCAAGTAGGTAGAT 59.494 40.741 0.00 0.00 39.02 1.98
8454 9773 9.796180 ATGTAAGTACTCCAAGTAGGTAGATAG 57.204 37.037 0.00 0.00 39.02 2.08
8455 9774 8.776119 TGTAAGTACTCCAAGTAGGTAGATAGT 58.224 37.037 0.00 0.00 39.02 2.12
8459 9778 8.334734 AGTACTCCAAGTAGGTAGATAGTTTGA 58.665 37.037 0.00 0.00 39.02 2.69
8460 9779 7.407393 ACTCCAAGTAGGTAGATAGTTTGAC 57.593 40.000 0.00 0.00 39.02 3.18
8461 9780 6.952358 ACTCCAAGTAGGTAGATAGTTTGACA 59.048 38.462 0.00 0.00 39.02 3.58
8462 9781 7.453752 ACTCCAAGTAGGTAGATAGTTTGACAA 59.546 37.037 0.00 0.00 39.02 3.18
8464 9783 8.311836 TCCAAGTAGGTAGATAGTTTGACAAAG 58.688 37.037 0.00 0.00 39.02 2.77
8466 9785 8.926710 CAAGTAGGTAGATAGTTTGACAAAGTG 58.073 37.037 16.90 0.00 0.00 3.16
8467 9786 8.418597 AGTAGGTAGATAGTTTGACAAAGTGA 57.581 34.615 16.90 3.65 0.00 3.41
8468 9787 8.305317 AGTAGGTAGATAGTTTGACAAAGTGAC 58.695 37.037 16.90 10.85 0.00 3.67
8469 9788 6.157211 AGGTAGATAGTTTGACAAAGTGACG 58.843 40.000 16.90 0.00 0.00 4.35
8470 9789 6.015688 AGGTAGATAGTTTGACAAAGTGACGA 60.016 38.462 16.90 5.85 0.00 4.20
8471 9790 6.643770 GGTAGATAGTTTGACAAAGTGACGAA 59.356 38.462 16.90 0.00 0.00 3.85
8472 9791 6.526566 AGATAGTTTGACAAAGTGACGAAC 57.473 37.500 16.90 3.55 36.91 3.95
8476 9795 5.151389 AGTTTGACAAAGTGACGAACAAAC 58.849 37.500 7.47 0.00 42.87 2.93
8477 9796 4.750952 TTGACAAAGTGACGAACAAACA 57.249 36.364 0.00 0.00 0.00 2.83
8478 9797 4.955925 TGACAAAGTGACGAACAAACAT 57.044 36.364 0.00 0.00 0.00 2.71
8479 9798 4.657055 TGACAAAGTGACGAACAAACATG 58.343 39.130 0.00 0.00 0.00 3.21
8481 9800 5.106515 TGACAAAGTGACGAACAAACATGAA 60.107 36.000 0.00 0.00 0.00 2.57
8482 9801 5.890334 ACAAAGTGACGAACAAACATGAAT 58.110 33.333 0.00 0.00 0.00 2.57
8484 9803 7.476667 ACAAAGTGACGAACAAACATGAATAA 58.523 30.769 0.00 0.00 0.00 1.40
8486 9805 6.861065 AGTGACGAACAAACATGAATAACT 57.139 33.333 0.00 0.00 0.00 2.24
8487 9806 7.259290 AGTGACGAACAAACATGAATAACTT 57.741 32.000 0.00 0.00 0.00 2.66
8488 9807 8.373048 AGTGACGAACAAACATGAATAACTTA 57.627 30.769 0.00 0.00 0.00 2.24
8490 9809 8.889000 GTGACGAACAAACATGAATAACTTAAC 58.111 33.333 0.00 0.00 0.00 2.01
8491 9810 8.613482 TGACGAACAAACATGAATAACTTAACA 58.387 29.630 0.00 0.00 0.00 2.41
8498 9817 9.507280 CAAACATGAATAACTTAACATAGCTGG 57.493 33.333 0.00 0.00 0.00 4.85
8500 10221 8.438676 ACATGAATAACTTAACATAGCTGGAC 57.561 34.615 0.00 0.00 0.00 4.02
8504 10225 9.290988 TGAATAACTTAACATAGCTGGACAAAA 57.709 29.630 0.00 0.00 0.00 2.44
8509 10230 8.040716 ACTTAACATAGCTGGACAAAATACAC 57.959 34.615 0.00 0.00 0.00 2.90
8511 10232 9.378551 CTTAACATAGCTGGACAAAATACACTA 57.621 33.333 0.00 0.00 0.00 2.74
8515 10236 7.829211 ACATAGCTGGACAAAATACACTAACAT 59.171 33.333 0.00 0.00 0.00 2.71
8516 10237 6.743575 AGCTGGACAAAATACACTAACATC 57.256 37.500 0.00 0.00 0.00 3.06
8517 10238 6.476378 AGCTGGACAAAATACACTAACATCT 58.524 36.000 0.00 0.00 0.00 2.90
8518 10239 7.620880 AGCTGGACAAAATACACTAACATCTA 58.379 34.615 0.00 0.00 0.00 1.98
8522 10243 7.880713 TGGACAAAATACACTAACATCTAGCAA 59.119 33.333 0.00 0.00 0.00 3.91
8526 10247 6.910536 AATACACTAACATCTAGCAAGCAC 57.089 37.500 0.00 0.00 0.00 4.40
8528 10249 4.641396 ACACTAACATCTAGCAAGCACAA 58.359 39.130 0.00 0.00 0.00 3.33
8535 10256 6.336842 ACATCTAGCAAGCACAAAGAAATT 57.663 33.333 0.00 0.00 0.00 1.82
8537 10258 6.016024 ACATCTAGCAAGCACAAAGAAATTGA 60.016 34.615 0.00 0.00 41.85 2.57
8538 10259 5.762045 TCTAGCAAGCACAAAGAAATTGAC 58.238 37.500 0.00 0.00 41.85 3.18
8540 10261 4.365723 AGCAAGCACAAAGAAATTGACTG 58.634 39.130 0.00 0.00 41.85 3.51
8541 10262 3.492011 GCAAGCACAAAGAAATTGACTGG 59.508 43.478 0.00 0.00 41.85 4.00
8542 10263 4.685924 CAAGCACAAAGAAATTGACTGGT 58.314 39.130 0.00 0.00 41.85 4.00
8544 10265 2.796593 GCACAAAGAAATTGACTGGTGC 59.203 45.455 17.91 17.91 41.85 5.01
8545 10266 3.383761 CACAAAGAAATTGACTGGTGCC 58.616 45.455 0.00 0.00 41.85 5.01
8546 10267 3.068590 CACAAAGAAATTGACTGGTGCCT 59.931 43.478 0.00 0.00 41.85 4.75
8547 10268 3.068590 ACAAAGAAATTGACTGGTGCCTG 59.931 43.478 0.00 0.00 41.85 4.85
8549 10270 2.787994 AGAAATTGACTGGTGCCTGAG 58.212 47.619 2.07 0.00 0.00 3.35
8550 10271 1.815003 GAAATTGACTGGTGCCTGAGG 59.185 52.381 0.00 0.00 0.00 3.86
8551 10272 0.038744 AATTGACTGGTGCCTGAGGG 59.961 55.000 0.00 0.00 0.00 4.30
8561 10282 2.914289 CCTGAGGGCATCTCCACC 59.086 66.667 0.00 0.00 41.76 4.61
8566 10287 2.438434 GGGCATCTCCACCCGTTG 60.438 66.667 0.00 0.00 36.07 4.10
8567 10288 3.134127 GGCATCTCCACCCGTTGC 61.134 66.667 0.00 0.00 34.01 4.17
8568 10289 3.134127 GCATCTCCACCCGTTGCC 61.134 66.667 0.00 0.00 0.00 4.52
8569 10290 2.438434 CATCTCCACCCGTTGCCC 60.438 66.667 0.00 0.00 0.00 5.36
8570 10291 3.728373 ATCTCCACCCGTTGCCCC 61.728 66.667 0.00 0.00 0.00 5.80
8588 10309 3.083386 CCCAGGGGGCGTCTAAAA 58.917 61.111 0.00 0.00 35.35 1.52
8589 10310 1.077716 CCCAGGGGGCGTCTAAAAG 60.078 63.158 0.00 0.00 35.35 2.27
8590 10311 1.749258 CCAGGGGGCGTCTAAAAGC 60.749 63.158 0.00 0.00 0.00 3.51
8594 10315 2.450345 GGGGCGTCTAAAAGCGTCG 61.450 63.158 0.00 0.00 33.04 5.12
8595 10316 1.735559 GGGCGTCTAAAAGCGTCGT 60.736 57.895 0.00 0.00 33.04 4.34
8596 10317 1.681025 GGGCGTCTAAAAGCGTCGTC 61.681 60.000 0.00 0.00 33.04 4.20
8598 10319 0.362512 GCGTCTAAAAGCGTCGTCTG 59.637 55.000 0.00 0.00 0.00 3.51
8599 10320 0.982673 CGTCTAAAAGCGTCGTCTGG 59.017 55.000 0.00 0.00 0.00 3.86
8603 10324 0.899720 TAAAAGCGTCGTCTGGGGAT 59.100 50.000 0.00 0.00 0.00 3.85
8604 10325 0.673644 AAAAGCGTCGTCTGGGGATG 60.674 55.000 0.00 0.00 0.00 3.51
8605 10326 1.541310 AAAGCGTCGTCTGGGGATGA 61.541 55.000 0.00 0.00 35.37 2.92
8606 10327 1.949847 AAGCGTCGTCTGGGGATGAG 61.950 60.000 0.00 0.00 38.06 2.90
8608 10329 2.501610 GTCGTCTGGGGATGAGCC 59.498 66.667 0.00 0.00 38.06 4.70
8609 10330 3.147595 TCGTCTGGGGATGAGCCG 61.148 66.667 0.00 0.00 37.63 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
694 804 0.887387 GGCGAGGGTACTGCAAAACA 60.887 55.000 0.00 0.00 0.00 2.83
765 875 0.240411 CCGTATACGTAGCTCTGCCC 59.760 60.000 22.87 0.00 37.74 5.36
816 926 2.413142 GGCCAGATGTGCTTCCTGC 61.413 63.158 0.00 0.00 43.25 4.85
828 938 1.227823 CACTGAAACGTGGGCCAGA 60.228 57.895 6.40 0.00 0.00 3.86
830 940 1.227823 CTCACTGAAACGTGGGCCA 60.228 57.895 0.00 0.00 35.63 5.36
845 955 1.270625 CCGTTTCCCTAGCAACACTCA 60.271 52.381 0.00 0.00 0.00 3.41
852 962 1.295423 GCTGACCGTTTCCCTAGCA 59.705 57.895 0.00 0.00 0.00 3.49
1015 1126 4.938074 TCCACCACCGGACCCGAA 62.938 66.667 9.46 0.00 42.83 4.30
1163 1292 2.895372 GATTGTACCCGCCCGCTG 60.895 66.667 0.00 0.00 0.00 5.18
1728 1857 3.335356 AACCAGGGCCAGATCGCAG 62.335 63.158 6.18 0.00 0.00 5.18
1867 2004 3.742433 ATTAGCCGAACTCTCATCAGG 57.258 47.619 0.00 0.00 0.00 3.86
1873 2010 3.804873 GTCCATGAATTAGCCGAACTCTC 59.195 47.826 0.00 0.00 0.00 3.20
1875 2012 3.309954 GTGTCCATGAATTAGCCGAACTC 59.690 47.826 0.00 0.00 0.00 3.01
1889 2026 0.108851 TCCGTGACATCGTGTCCATG 60.109 55.000 13.24 8.29 46.40 3.66
1905 2042 3.436015 CCACGTAGTCATATCCTAGTCCG 59.564 52.174 0.00 0.00 41.61 4.79
1967 2107 4.883083 ACATATCGAGAAACCACGCATAT 58.117 39.130 0.00 0.00 0.00 1.78
2219 2359 6.195798 CAGCGTGTAAAAAGTAAAAACCTCAC 59.804 38.462 0.00 0.00 0.00 3.51
2253 2393 1.065600 GTGCTGCCGAACTTTTGCA 59.934 52.632 0.00 0.00 0.00 4.08
2316 2458 1.026718 CAGACAAGCCATTCGGGGAC 61.027 60.000 0.00 0.00 37.04 4.46
2317 2459 1.299648 CAGACAAGCCATTCGGGGA 59.700 57.895 0.00 0.00 37.04 4.81
2318 2460 2.409870 GCAGACAAGCCATTCGGGG 61.410 63.158 0.00 0.00 37.04 5.73
2319 2461 3.190878 GCAGACAAGCCATTCGGG 58.809 61.111 0.00 0.00 40.85 5.14
2553 2700 7.411486 AGAGAAGCTTGTAGTAGCATTCTAA 57.589 36.000 2.10 0.00 43.68 2.10
2598 2745 5.436175 TCCGATTGAATGAAAATAGGCAGA 58.564 37.500 0.00 0.00 31.82 4.26
2660 2807 3.703001 ATCCTGTTGATCCGTCTTGTT 57.297 42.857 0.00 0.00 0.00 2.83
2679 2826 1.827344 TGTCAGCTCCGTCATCAGAAT 59.173 47.619 0.00 0.00 0.00 2.40
2684 2831 2.378028 GCTTGTCAGCTCCGTCATC 58.622 57.895 0.00 0.00 43.51 2.92
2737 2884 2.109538 CTTGCTGCCATCGTATGCGG 62.110 60.000 2.62 0.00 38.89 5.69
2955 3102 3.753294 ACCTTGACCTTGTACTCACTG 57.247 47.619 0.00 0.00 0.00 3.66
2972 3119 3.799755 GCGCGGCGAATTGAACCT 61.800 61.111 28.54 0.00 0.00 3.50
3029 3176 0.798776 CTGTGGAGAATCACGTTGCC 59.201 55.000 0.00 0.00 40.31 4.52
3166 3313 8.432013 AGAACAACAAGAGCCATATACATATGA 58.568 33.333 10.38 0.00 42.05 2.15
3172 3319 6.018669 GCTGTAGAACAACAAGAGCCATATAC 60.019 42.308 0.00 0.00 0.00 1.47
3180 3329 6.090088 GTGACATAGCTGTAGAACAACAAGAG 59.910 42.308 0.00 0.00 35.14 2.85
3332 3481 3.254903 AGCGAGGGGTTTTGAACAAATAC 59.745 43.478 0.82 3.39 0.00 1.89
3337 3486 2.642154 TAAGCGAGGGGTTTTGAACA 57.358 45.000 0.00 0.00 35.15 3.18
3352 3501 6.199393 GTGATTCCGTAACCATGAATTAAGC 58.801 40.000 0.00 0.00 0.00 3.09
3370 3519 2.194271 GCAGTGTAGCCTACGTGATTC 58.806 52.381 0.00 0.00 0.00 2.52
3421 3570 7.491682 ACAATAAATGTGATATCCACTTTGGC 58.508 34.615 0.00 0.00 45.86 4.52
3463 3612 0.916809 ACATGGGTTGGGTAGTAGCC 59.083 55.000 11.65 11.65 36.00 3.93
3531 3680 5.222048 TGTGTTTAAATCACTCCCCTTAGCT 60.222 40.000 16.53 0.00 36.83 3.32
3693 3844 8.667463 GTGTTCACCTTAAAACTACACTGTAAA 58.333 33.333 0.00 0.00 33.50 2.01
3730 3884 5.382664 AACCCTGTGGAAAAGAACTTCTA 57.617 39.130 0.00 0.00 34.81 2.10
3764 3918 4.619628 GCACAACAAGTACAACAAGGGTTT 60.620 41.667 0.00 0.00 34.21 3.27
3802 3956 7.717436 TCACCGATATAGATTTGTAAAATGGCA 59.283 33.333 0.00 0.00 0.00 4.92
3816 3970 9.476202 CTGAACAAATTGTATCACCGATATAGA 57.524 33.333 0.00 0.00 0.00 1.98
3830 3984 4.780815 TCAGACACTCCTGAACAAATTGT 58.219 39.130 0.00 0.00 39.96 2.71
3855 4009 1.570857 TTGGGGTCGGCATTCCTCAT 61.571 55.000 0.00 0.00 33.91 2.90
3899 4053 5.066505 GGTTGATAAATGCAGTACCTTCAGG 59.933 44.000 0.00 0.00 42.17 3.86
3960 4115 4.338118 AGCTGGAAAGAACGAAACAATTCA 59.662 37.500 0.00 0.00 35.15 2.57
4374 4532 6.293407 CCCTTCAATAATTGTGCATACCTACG 60.293 42.308 0.00 0.00 0.00 3.51
4470 4628 7.180051 CCTTAAGTATGCTCTTCTCCCTATCAT 59.820 40.741 0.97 0.00 0.00 2.45
4646 4805 3.499537 TCAGCTGAATAGTTGTTGTGCTG 59.500 43.478 15.67 0.00 45.31 4.41
4843 5002 2.952310 ACAAGCTTTGTCCTTTCCAGAC 59.048 45.455 0.00 0.00 40.56 3.51
4978 5157 8.959548 TCCATGTTATACTAAAAGACTACGACA 58.040 33.333 0.00 0.00 0.00 4.35
5094 5274 2.614829 TAGAAGGAATAAGCGCCCAC 57.385 50.000 2.29 0.00 0.00 4.61
5099 5279 8.147642 ACTTTCATGAATAGAAGGAATAAGCG 57.852 34.615 9.40 0.00 0.00 4.68
5115 5295 7.554959 AGGGAGAACTAGTTAACTTTCATGA 57.445 36.000 14.49 0.00 0.00 3.07
5263 5443 2.014335 TCGACTCCATCAATGTGCAG 57.986 50.000 0.00 0.00 0.00 4.41
5281 5461 2.863401 AAGTCGCCACAAAACCTTTC 57.137 45.000 0.00 0.00 0.00 2.62
5421 5602 3.055094 TGAGAGAATTTCTACCACTGGGC 60.055 47.826 0.00 0.00 35.87 5.36
5422 5603 4.764172 CTGAGAGAATTTCTACCACTGGG 58.236 47.826 0.00 0.00 35.87 4.45
5636 5818 8.275040 AGATAAAGGGCAATACTAAAGATGTGT 58.725 33.333 0.00 0.00 0.00 3.72
5651 5833 4.080526 GGTAACAGGAAGAGATAAAGGGCA 60.081 45.833 0.00 0.00 0.00 5.36
5714 5896 4.986659 GTCTCGCACACCTTCTTAACTTTA 59.013 41.667 0.00 0.00 0.00 1.85
5753 5935 3.071457 TGTCTGGCTTGAGACATTGAGAA 59.929 43.478 8.97 0.00 45.96 2.87
5842 6024 1.676006 AGAAAAAGGTGACTGCCAACG 59.324 47.619 0.00 0.00 42.68 4.10
5865 6047 3.325870 TCTCCATTGAACACTAAGCACG 58.674 45.455 0.00 0.00 0.00 5.34
6021 6204 1.209504 GACGGTGAAGAATCATCCCCA 59.790 52.381 0.00 0.00 38.01 4.96
6033 6216 1.851021 CGGCTGCAATTGACGGTGAA 61.851 55.000 10.34 0.00 0.00 3.18
6078 6261 5.108385 ACCAAATCGTCAAGTGAACAATC 57.892 39.130 0.00 0.00 0.00 2.67
6092 6275 8.964420 AAATTCACACACTATTAACCAAATCG 57.036 30.769 0.00 0.00 0.00 3.34
6167 6350 3.863424 GCAGGCACTCATCAAAAATCATG 59.137 43.478 0.00 0.00 34.60 3.07
6168 6351 3.512329 TGCAGGCACTCATCAAAAATCAT 59.488 39.130 0.00 0.00 34.60 2.45
6169 6352 2.892215 TGCAGGCACTCATCAAAAATCA 59.108 40.909 0.00 0.00 34.60 2.57
6170 6353 3.508762 CTGCAGGCACTCATCAAAAATC 58.491 45.455 5.57 0.00 34.60 2.17
6171 6354 2.232941 CCTGCAGGCACTCATCAAAAAT 59.767 45.455 22.33 0.00 34.60 1.82
6172 6355 1.614903 CCTGCAGGCACTCATCAAAAA 59.385 47.619 22.33 0.00 34.60 1.94
6289 6472 0.248843 CTTCTCAGGGTCTGTGCCTC 59.751 60.000 0.00 0.00 32.61 4.70
6324 6507 1.940613 GACTTACCGCATCATTCCACC 59.059 52.381 0.00 0.00 0.00 4.61
6402 6585 2.009681 TGACACTAGCAACTCCCTGA 57.990 50.000 0.00 0.00 0.00 3.86
6426 6609 5.640147 TGGGTTTATGTTTGGTCTTCTGAT 58.360 37.500 0.00 0.00 0.00 2.90
6674 6862 6.644248 AAAAGGAACACTGTTAATACACCC 57.356 37.500 0.00 0.00 0.00 4.61
6730 6918 0.758734 TCACAGGGGGCTGATAATCG 59.241 55.000 0.00 0.00 0.00 3.34
6835 7025 0.396811 GTGAGGCACACTTACCAGGT 59.603 55.000 7.87 0.00 45.13 4.00
6885 7131 4.522114 TGCTATTAAACTAGCATGTGCCA 58.478 39.130 6.67 0.00 46.92 4.92
7194 7472 0.947244 CAGAGGTTGTTGGTGAGCAC 59.053 55.000 0.00 0.00 0.00 4.40
7211 7489 1.135774 TGTCGAGCTTACGTGTAGCAG 60.136 52.381 21.61 16.02 34.70 4.24
7421 7701 8.082852 ACAGAAGATAATTACATACCGCTGTAG 58.917 37.037 0.00 0.00 33.38 2.74
7422 7702 7.865889 CACAGAAGATAATTACATACCGCTGTA 59.134 37.037 0.00 0.00 31.32 2.74
7612 7892 4.017958 TCCCATGAACAAGCCACCTAATTA 60.018 41.667 0.00 0.00 0.00 1.40
7613 7893 3.099141 CCCATGAACAAGCCACCTAATT 58.901 45.455 0.00 0.00 0.00 1.40
7614 7894 2.311542 TCCCATGAACAAGCCACCTAAT 59.688 45.455 0.00 0.00 0.00 1.73
7615 7895 1.707989 TCCCATGAACAAGCCACCTAA 59.292 47.619 0.00 0.00 0.00 2.69
7616 7896 1.281867 CTCCCATGAACAAGCCACCTA 59.718 52.381 0.00 0.00 0.00 3.08
7617 7897 0.038744 CTCCCATGAACAAGCCACCT 59.961 55.000 0.00 0.00 0.00 4.00
7618 7898 0.251341 ACTCCCATGAACAAGCCACC 60.251 55.000 0.00 0.00 0.00 4.61
7619 7899 1.168714 GACTCCCATGAACAAGCCAC 58.831 55.000 0.00 0.00 0.00 5.01
7697 8075 7.042389 CCATGTTTTACCAACACCATGTTTTAC 60.042 37.037 0.00 0.00 38.77 2.01
7699 8077 5.819901 CCATGTTTTACCAACACCATGTTTT 59.180 36.000 0.00 0.00 38.77 2.43
7700 8078 5.363939 CCATGTTTTACCAACACCATGTTT 58.636 37.500 0.00 0.00 38.77 2.83
7702 8080 3.323403 CCCATGTTTTACCAACACCATGT 59.677 43.478 0.00 0.00 32.37 3.21
7762 8170 2.978156 AGCCTGTTTGATTCCCTTCA 57.022 45.000 0.00 0.00 0.00 3.02
7921 8332 1.343465 CTAAACCGTGACAGTGGGAGT 59.657 52.381 0.00 0.00 0.00 3.85
7922 8333 1.616865 TCTAAACCGTGACAGTGGGAG 59.383 52.381 0.00 0.00 0.00 4.30
7923 8334 1.707106 TCTAAACCGTGACAGTGGGA 58.293 50.000 0.00 0.00 0.00 4.37
7924 8335 2.413837 CTTCTAAACCGTGACAGTGGG 58.586 52.381 0.00 0.00 0.00 4.61
7925 8336 2.413837 CCTTCTAAACCGTGACAGTGG 58.586 52.381 0.00 0.00 0.00 4.00
7926 8337 1.798813 GCCTTCTAAACCGTGACAGTG 59.201 52.381 0.00 0.00 0.00 3.66
7927 8338 1.604693 CGCCTTCTAAACCGTGACAGT 60.605 52.381 0.00 0.00 0.00 3.55
7928 8339 1.068474 CGCCTTCTAAACCGTGACAG 58.932 55.000 0.00 0.00 0.00 3.51
7929 8340 0.947180 GCGCCTTCTAAACCGTGACA 60.947 55.000 0.00 0.00 0.00 3.58
7986 8409 6.687105 CGTACTGTGAATGCTAATTTTTAGCC 59.313 38.462 14.76 2.91 39.69 3.93
7995 8418 2.351418 GCATGCGTACTGTGAATGCTAA 59.649 45.455 0.00 0.00 40.34 3.09
8007 8430 5.862924 ACCATTTCTATATGCATGCGTAC 57.137 39.130 21.59 0.00 0.00 3.67
8010 8433 5.861222 TGTACCATTTCTATATGCATGCG 57.139 39.130 14.09 0.00 0.00 4.73
8027 8450 5.242393 TGGCTAATTAGTACTCCGATGTACC 59.758 44.000 13.91 2.76 42.58 3.34
8031 8454 5.455056 AGTGGCTAATTAGTACTCCGATG 57.545 43.478 13.91 0.00 0.00 3.84
8070 8493 4.331968 CACAATAGACAAGGTTTAGGGCA 58.668 43.478 0.00 0.00 0.00 5.36
8090 8513 1.204792 AAATTTGCGTGCGTTTCCAC 58.795 45.000 0.00 0.00 0.00 4.02
8107 8530 7.934665 TGTCACAGTTTAGAAGGCATAGTTAAA 59.065 33.333 0.00 0.00 0.00 1.52
8114 9052 4.564406 CCTCTGTCACAGTTTAGAAGGCAT 60.564 45.833 4.28 0.00 32.61 4.40
8133 9071 5.912149 TGCATTATCCAAATACTCCCTCT 57.088 39.130 0.00 0.00 0.00 3.69
8143 9081 5.636965 CACCGAAACAATTGCATTATCCAAA 59.363 36.000 5.05 0.00 0.00 3.28
8147 9085 4.172505 TGCACCGAAACAATTGCATTATC 58.827 39.130 5.05 0.00 40.01 1.75
8148 9086 4.082300 TCTGCACCGAAACAATTGCATTAT 60.082 37.500 5.05 0.00 43.74 1.28
8150 9088 2.035704 TCTGCACCGAAACAATTGCATT 59.964 40.909 5.05 0.58 43.74 3.56
8151 9089 1.612950 TCTGCACCGAAACAATTGCAT 59.387 42.857 5.05 0.00 43.74 3.96
8152 9090 1.001487 CTCTGCACCGAAACAATTGCA 60.001 47.619 5.05 0.00 42.60 4.08
8153 9091 1.689959 CTCTGCACCGAAACAATTGC 58.310 50.000 5.05 0.00 35.45 3.56
8154 9092 1.001487 TGCTCTGCACCGAAACAATTG 60.001 47.619 3.24 3.24 31.71 2.32
8155 9093 1.317613 TGCTCTGCACCGAAACAATT 58.682 45.000 0.00 0.00 31.71 2.32
8156 9094 3.019964 TGCTCTGCACCGAAACAAT 57.980 47.368 0.00 0.00 31.71 2.71
8167 9105 2.755836 TTTTTCGTTGAGTGCTCTGC 57.244 45.000 0.00 0.00 0.00 4.26
8183 9121 3.933332 GCCACTGTCTCTACGCTATTTTT 59.067 43.478 0.00 0.00 0.00 1.94
8185 9123 2.496070 TGCCACTGTCTCTACGCTATTT 59.504 45.455 0.00 0.00 0.00 1.40
8187 9125 1.678627 CTGCCACTGTCTCTACGCTAT 59.321 52.381 0.00 0.00 0.00 2.97
8188 9126 1.095600 CTGCCACTGTCTCTACGCTA 58.904 55.000 0.00 0.00 0.00 4.26
8189 9127 1.886585 CTGCCACTGTCTCTACGCT 59.113 57.895 0.00 0.00 0.00 5.07
8191 9129 1.515088 CGCTGCCACTGTCTCTACG 60.515 63.158 0.00 0.00 0.00 3.51
8193 9131 0.609406 AGACGCTGCCACTGTCTCTA 60.609 55.000 2.63 0.00 38.55 2.43
8194 9132 1.467678 AAGACGCTGCCACTGTCTCT 61.468 55.000 8.10 0.00 41.88 3.10
8195 9133 1.005630 AAGACGCTGCCACTGTCTC 60.006 57.895 8.10 0.00 41.88 3.36
8196 9134 1.005630 GAAGACGCTGCCACTGTCT 60.006 57.895 2.63 2.63 44.46 3.41
8197 9135 2.375766 CGAAGACGCTGCCACTGTC 61.376 63.158 0.00 0.00 0.00 3.51
8199 9137 0.666274 TAACGAAGACGCTGCCACTG 60.666 55.000 0.00 0.00 43.96 3.66
8200 9138 0.246635 ATAACGAAGACGCTGCCACT 59.753 50.000 0.00 0.00 43.96 4.00
8201 9139 0.370273 CATAACGAAGACGCTGCCAC 59.630 55.000 0.00 0.00 43.96 5.01
8203 9141 1.084370 AGCATAACGAAGACGCTGCC 61.084 55.000 0.00 0.00 43.96 4.85
8204 9142 0.299003 GAGCATAACGAAGACGCTGC 59.701 55.000 0.00 0.00 43.96 5.25
8205 9143 1.629013 TGAGCATAACGAAGACGCTG 58.371 50.000 0.00 0.00 43.96 5.18
8206 9144 1.993370 GTTGAGCATAACGAAGACGCT 59.007 47.619 0.00 0.00 43.96 5.07
8207 9145 1.724623 TGTTGAGCATAACGAAGACGC 59.275 47.619 0.00 0.00 43.96 5.19
8208 9146 3.612423 TCATGTTGAGCATAACGAAGACG 59.388 43.478 0.00 0.00 39.75 4.18
8209 9147 5.725110 ATCATGTTGAGCATAACGAAGAC 57.275 39.130 0.00 0.00 35.74 3.01
8210 9148 6.476706 CACTATCATGTTGAGCATAACGAAGA 59.523 38.462 0.00 0.00 35.74 2.87
8211 9149 6.256539 ACACTATCATGTTGAGCATAACGAAG 59.743 38.462 0.00 0.00 35.74 3.79
8212 9150 6.035975 CACACTATCATGTTGAGCATAACGAA 59.964 38.462 0.00 0.00 35.74 3.85
8213 9151 5.519927 CACACTATCATGTTGAGCATAACGA 59.480 40.000 0.00 0.00 35.74 3.85
8214 9152 5.731278 CACACTATCATGTTGAGCATAACG 58.269 41.667 0.00 0.00 35.74 3.18
8215 9153 5.295292 AGCACACTATCATGTTGAGCATAAC 59.705 40.000 0.00 0.00 35.74 1.89
8217 9155 5.027293 AGCACACTATCATGTTGAGCATA 57.973 39.130 0.00 0.00 35.74 3.14
8220 9158 5.801350 TTTAGCACACTATCATGTTGAGC 57.199 39.130 0.00 0.00 0.00 4.26
8221 9159 7.312657 ACATTTAGCACACTATCATGTTGAG 57.687 36.000 0.00 0.00 32.50 3.02
8222 9160 8.664798 GTTACATTTAGCACACTATCATGTTGA 58.335 33.333 0.00 0.00 35.63 3.18
8223 9161 7.910162 GGTTACATTTAGCACACTATCATGTTG 59.090 37.037 0.00 0.00 35.63 3.33
8225 9163 6.542370 GGGTTACATTTAGCACACTATCATGT 59.458 38.462 0.00 0.00 36.90 3.21
8226 9164 6.542005 TGGGTTACATTTAGCACACTATCATG 59.458 38.462 0.00 0.00 0.00 3.07
8227 9165 6.658849 TGGGTTACATTTAGCACACTATCAT 58.341 36.000 0.00 0.00 0.00 2.45
8229 9167 6.995511 TTGGGTTACATTTAGCACACTATC 57.004 37.500 0.00 0.00 0.00 2.08
8230 9168 7.768807 TTTTGGGTTACATTTAGCACACTAT 57.231 32.000 0.00 0.00 0.00 2.12
8231 9169 7.584122 TTTTTGGGTTACATTTAGCACACTA 57.416 32.000 0.00 0.00 0.00 2.74
8233 9171 8.819643 TTATTTTTGGGTTACATTTAGCACAC 57.180 30.769 0.00 0.00 0.00 3.82
8235 9173 8.931775 CCTTTATTTTTGGGTTACATTTAGCAC 58.068 33.333 0.00 0.00 0.00 4.40
8236 9174 8.871125 TCCTTTATTTTTGGGTTACATTTAGCA 58.129 29.630 0.00 0.00 0.00 3.49
8237 9175 9.884636 ATCCTTTATTTTTGGGTTACATTTAGC 57.115 29.630 0.00 0.00 0.00 3.09
8244 9182 9.549078 TGTTGAAATCCTTTATTTTTGGGTTAC 57.451 29.630 0.00 0.00 37.93 2.50
8247 9185 6.704050 CGTGTTGAAATCCTTTATTTTTGGGT 59.296 34.615 0.00 0.00 37.93 4.51
8248 9186 6.926272 TCGTGTTGAAATCCTTTATTTTTGGG 59.074 34.615 0.00 0.00 37.93 4.12
8249 9187 7.938563 TCGTGTTGAAATCCTTTATTTTTGG 57.061 32.000 0.00 0.00 37.93 3.28
8250 9188 9.796062 CATTCGTGTTGAAATCCTTTATTTTTG 57.204 29.630 0.00 0.00 40.71 2.44
8251 9189 9.541143 ACATTCGTGTTGAAATCCTTTATTTTT 57.459 25.926 0.00 0.00 40.71 1.94
8252 9190 9.541143 AACATTCGTGTTGAAATCCTTTATTTT 57.459 25.926 0.00 0.00 40.71 1.82
8266 9204 8.735303 TTTAACAATATCCAACATTCGTGTTG 57.265 30.769 12.94 12.94 46.21 3.33
8290 9228 6.899393 TTGATGTCAGGCTTCTATGTTTTT 57.101 33.333 0.00 0.00 0.00 1.94
8295 9233 9.276590 TGTTATTATTGATGTCAGGCTTCTATG 57.723 33.333 0.00 0.00 0.00 2.23
8298 9236 8.216423 AGATGTTATTATTGATGTCAGGCTTCT 58.784 33.333 0.00 0.00 0.00 2.85
8301 9239 7.994911 TCAAGATGTTATTATTGATGTCAGGCT 59.005 33.333 0.00 0.00 0.00 4.58
8302 9240 8.158169 TCAAGATGTTATTATTGATGTCAGGC 57.842 34.615 0.00 0.00 0.00 4.85
8314 9252 9.269453 CAGCATCTGATTCTCAAGATGTTATTA 57.731 33.333 12.75 0.00 35.93 0.98
8316 9254 6.205076 GCAGCATCTGATTCTCAAGATGTTAT 59.795 38.462 12.75 0.00 35.93 1.89
8317 9255 5.526479 GCAGCATCTGATTCTCAAGATGTTA 59.474 40.000 12.75 0.00 35.93 2.41
8318 9256 4.335874 GCAGCATCTGATTCTCAAGATGTT 59.664 41.667 12.75 5.56 35.93 2.71
8319 9257 3.878103 GCAGCATCTGATTCTCAAGATGT 59.122 43.478 12.75 0.15 35.93 3.06
8320 9258 3.251245 GGCAGCATCTGATTCTCAAGATG 59.749 47.826 8.04 8.04 36.26 2.90
8322 9260 2.740904 CGGCAGCATCTGATTCTCAAGA 60.741 50.000 0.00 0.00 32.44 3.02
8323 9261 1.598132 CGGCAGCATCTGATTCTCAAG 59.402 52.381 0.00 0.00 32.44 3.02
8324 9262 1.660167 CGGCAGCATCTGATTCTCAA 58.340 50.000 0.00 0.00 32.44 3.02
8325 9263 0.179065 CCGGCAGCATCTGATTCTCA 60.179 55.000 0.00 0.00 32.44 3.27
8326 9264 0.883814 CCCGGCAGCATCTGATTCTC 60.884 60.000 0.00 0.00 32.44 2.87
8328 9266 0.250640 ATCCCGGCAGCATCTGATTC 60.251 55.000 0.00 0.00 32.44 2.52
8330 9268 1.126329 AGATCCCGGCAGCATCTGAT 61.126 55.000 0.00 0.00 32.44 2.90
8331 9269 1.752358 GAGATCCCGGCAGCATCTGA 61.752 60.000 0.00 0.00 32.44 3.27
8334 9272 2.031768 GGAGATCCCGGCAGCATC 59.968 66.667 0.00 0.00 0.00 3.91
8337 9275 1.686325 TTAGTGGAGATCCCGGCAGC 61.686 60.000 0.00 0.00 37.93 5.25
8338 9276 1.051812 ATTAGTGGAGATCCCGGCAG 58.948 55.000 0.00 0.00 37.93 4.85
8339 9277 2.391926 TATTAGTGGAGATCCCGGCA 57.608 50.000 0.00 0.00 37.93 5.69
8340 9278 2.633481 ACTTATTAGTGGAGATCCCGGC 59.367 50.000 0.00 0.00 37.93 6.13
8343 9281 5.481122 GGGAGTACTTATTAGTGGAGATCCC 59.519 48.000 0.00 1.18 35.78 3.85
8344 9282 6.316513 AGGGAGTACTTATTAGTGGAGATCC 58.683 44.000 0.00 0.00 35.78 3.36
8345 9283 6.434965 GGAGGGAGTACTTATTAGTGGAGATC 59.565 46.154 0.00 0.00 35.78 2.75
8348 9286 4.519730 CGGAGGGAGTACTTATTAGTGGAG 59.480 50.000 0.00 0.00 35.78 3.86
8350 9288 4.213513 ACGGAGGGAGTACTTATTAGTGG 58.786 47.826 0.00 0.00 35.78 4.00
8351 9289 4.277921 GGACGGAGGGAGTACTTATTAGTG 59.722 50.000 0.00 0.00 35.78 2.74
8352 9290 4.468713 GGACGGAGGGAGTACTTATTAGT 58.531 47.826 0.00 0.00 38.44 2.24
8353 9291 3.825585 GGGACGGAGGGAGTACTTATTAG 59.174 52.174 0.00 0.00 0.00 1.73
8355 9293 2.023695 TGGGACGGAGGGAGTACTTATT 60.024 50.000 0.00 0.00 0.00 1.40
8356 9294 1.572415 TGGGACGGAGGGAGTACTTAT 59.428 52.381 0.00 0.00 0.00 1.73
8357 9295 1.002069 TGGGACGGAGGGAGTACTTA 58.998 55.000 0.00 0.00 0.00 2.24
8360 9298 2.077687 TTATGGGACGGAGGGAGTAC 57.922 55.000 0.00 0.00 0.00 2.73
8379 9510 5.011125 CCCTCCGTCTCATAATGTAAGACAT 59.989 44.000 0.00 0.00 41.31 3.06
8381 9512 4.583489 TCCCTCCGTCTCATAATGTAAGAC 59.417 45.833 0.00 0.00 36.82 3.01
8382 9513 4.800023 TCCCTCCGTCTCATAATGTAAGA 58.200 43.478 0.00 0.00 0.00 2.10
8383 9514 4.585162 ACTCCCTCCGTCTCATAATGTAAG 59.415 45.833 0.00 0.00 0.00 2.34
8384 9515 4.543689 ACTCCCTCCGTCTCATAATGTAA 58.456 43.478 0.00 0.00 0.00 2.41
8385 9516 4.180377 ACTCCCTCCGTCTCATAATGTA 57.820 45.455 0.00 0.00 0.00 2.29
8386 9517 3.033659 ACTCCCTCCGTCTCATAATGT 57.966 47.619 0.00 0.00 0.00 2.71
8388 9519 7.674348 TGATTATTACTCCCTCCGTCTCATAAT 59.326 37.037 0.00 0.00 0.00 1.28
8389 9520 7.008332 TGATTATTACTCCCTCCGTCTCATAA 58.992 38.462 0.00 0.00 0.00 1.90
8390 9521 6.433404 GTGATTATTACTCCCTCCGTCTCATA 59.567 42.308 0.00 0.00 0.00 2.15
8391 9522 5.244178 GTGATTATTACTCCCTCCGTCTCAT 59.756 44.000 0.00 0.00 0.00 2.90
8394 9713 4.805744 AGTGATTATTACTCCCTCCGTCT 58.194 43.478 0.00 0.00 0.00 4.18
8408 9727 1.565759 TGGCCTGCAGGAAGTGATTAT 59.434 47.619 37.21 0.00 37.39 1.28
8410 9729 0.333993 ATGGCCTGCAGGAAGTGATT 59.666 50.000 37.21 9.79 37.39 2.57
8411 9730 0.395311 CATGGCCTGCAGGAAGTGAT 60.395 55.000 37.21 15.74 37.39 3.06
8412 9731 1.001764 CATGGCCTGCAGGAAGTGA 60.002 57.895 37.21 14.09 37.39 3.41
8414 9733 0.698238 TTACATGGCCTGCAGGAAGT 59.302 50.000 37.21 26.40 37.39 3.01
8415 9734 1.340405 ACTTACATGGCCTGCAGGAAG 60.340 52.381 37.21 28.23 37.39 3.46
8416 9735 0.698238 ACTTACATGGCCTGCAGGAA 59.302 50.000 37.21 23.31 37.39 3.36
8417 9736 1.209504 GTACTTACATGGCCTGCAGGA 59.790 52.381 37.21 17.52 37.39 3.86
8419 9738 2.555199 GAGTACTTACATGGCCTGCAG 58.445 52.381 6.78 6.78 0.00 4.41
8420 9739 1.209504 GGAGTACTTACATGGCCTGCA 59.790 52.381 3.32 0.00 0.00 4.41
8421 9740 1.209504 TGGAGTACTTACATGGCCTGC 59.790 52.381 3.32 0.00 0.00 4.85
8422 9741 3.055094 ACTTGGAGTACTTACATGGCCTG 60.055 47.826 3.32 2.01 0.00 4.85
8424 9743 3.629142 ACTTGGAGTACTTACATGGCC 57.371 47.619 0.00 0.00 0.00 5.36
8425 9744 4.161754 ACCTACTTGGAGTACTTACATGGC 59.838 45.833 0.00 0.00 39.71 4.40
8426 9745 5.934402 ACCTACTTGGAGTACTTACATGG 57.066 43.478 0.00 3.53 39.71 3.66
8427 9746 7.876936 TCTACCTACTTGGAGTACTTACATG 57.123 40.000 0.00 4.99 39.71 3.21
8428 9747 9.796180 CTATCTACCTACTTGGAGTACTTACAT 57.204 37.037 0.00 0.00 39.71 2.29
8429 9748 8.776119 ACTATCTACCTACTTGGAGTACTTACA 58.224 37.037 0.00 0.00 39.71 2.41
8430 9749 9.625747 AACTATCTACCTACTTGGAGTACTTAC 57.374 37.037 0.00 0.00 39.71 2.34
8432 9751 8.968969 CAAACTATCTACCTACTTGGAGTACTT 58.031 37.037 0.00 0.00 39.71 2.24
8433 9752 8.334734 TCAAACTATCTACCTACTTGGAGTACT 58.665 37.037 0.00 0.00 39.71 2.73
8434 9753 8.404765 GTCAAACTATCTACCTACTTGGAGTAC 58.595 40.741 0.00 0.00 39.71 2.73
8436 9755 6.952358 TGTCAAACTATCTACCTACTTGGAGT 59.048 38.462 0.00 0.00 39.71 3.85
8439 9758 8.095169 ACTTTGTCAAACTATCTACCTACTTGG 58.905 37.037 0.00 0.00 42.93 3.61
8440 9759 8.926710 CACTTTGTCAAACTATCTACCTACTTG 58.073 37.037 0.00 0.00 0.00 3.16
8443 9762 7.272948 CGTCACTTTGTCAAACTATCTACCTAC 59.727 40.741 0.00 0.00 0.00 3.18
8444 9763 7.175467 TCGTCACTTTGTCAAACTATCTACCTA 59.825 37.037 0.00 0.00 0.00 3.08
8445 9764 6.015688 TCGTCACTTTGTCAAACTATCTACCT 60.016 38.462 0.00 0.00 0.00 3.08
8446 9765 6.154445 TCGTCACTTTGTCAAACTATCTACC 58.846 40.000 0.00 0.00 0.00 3.18
8447 9766 7.168637 TGTTCGTCACTTTGTCAAACTATCTAC 59.831 37.037 0.00 0.00 0.00 2.59
8448 9767 7.204604 TGTTCGTCACTTTGTCAAACTATCTA 58.795 34.615 0.00 0.00 0.00 1.98
8450 9769 6.281848 TGTTCGTCACTTTGTCAAACTATC 57.718 37.500 0.00 0.00 0.00 2.08
8452 9771 6.073167 TGTTTGTTCGTCACTTTGTCAAACTA 60.073 34.615 15.32 3.93 41.64 2.24
8454 9773 4.912766 TGTTTGTTCGTCACTTTGTCAAAC 59.087 37.500 0.00 0.00 41.54 2.93
8455 9774 5.109662 TGTTTGTTCGTCACTTTGTCAAA 57.890 34.783 0.00 0.00 0.00 2.69
8457 9776 4.393371 TCATGTTTGTTCGTCACTTTGTCA 59.607 37.500 0.00 0.00 0.00 3.58
8459 9778 4.955925 TCATGTTTGTTCGTCACTTTGT 57.044 36.364 0.00 0.00 0.00 2.83
8460 9779 7.643764 AGTTATTCATGTTTGTTCGTCACTTTG 59.356 33.333 0.00 0.00 0.00 2.77
8461 9780 7.703328 AGTTATTCATGTTTGTTCGTCACTTT 58.297 30.769 0.00 0.00 0.00 2.66
8462 9781 7.259290 AGTTATTCATGTTTGTTCGTCACTT 57.741 32.000 0.00 0.00 0.00 3.16
8464 9783 8.889000 GTTAAGTTATTCATGTTTGTTCGTCAC 58.111 33.333 0.00 0.00 0.00 3.67
8466 9785 8.996988 TGTTAAGTTATTCATGTTTGTTCGTC 57.003 30.769 0.00 0.00 0.00 4.20
8472 9791 9.507280 CCAGCTATGTTAAGTTATTCATGTTTG 57.493 33.333 9.78 6.37 0.00 2.93
8476 9795 8.437360 TGTCCAGCTATGTTAAGTTATTCATG 57.563 34.615 9.78 0.00 0.00 3.07
8477 9796 9.461312 TTTGTCCAGCTATGTTAAGTTATTCAT 57.539 29.630 0.00 6.41 0.00 2.57
8478 9797 8.856153 TTTGTCCAGCTATGTTAAGTTATTCA 57.144 30.769 0.00 0.00 0.00 2.57
8482 9801 9.727859 TGTATTTTGTCCAGCTATGTTAAGTTA 57.272 29.630 0.00 0.00 0.00 2.24
8484 9803 7.883311 AGTGTATTTTGTCCAGCTATGTTAAGT 59.117 33.333 0.00 0.00 0.00 2.24
8486 9805 9.727859 TTAGTGTATTTTGTCCAGCTATGTTAA 57.272 29.630 0.00 0.00 0.00 2.01
8487 9806 9.158233 GTTAGTGTATTTTGTCCAGCTATGTTA 57.842 33.333 0.00 0.00 0.00 2.41
8488 9807 7.663905 TGTTAGTGTATTTTGTCCAGCTATGTT 59.336 33.333 0.00 0.00 0.00 2.71
8490 9809 7.609760 TGTTAGTGTATTTTGTCCAGCTATG 57.390 36.000 0.00 0.00 0.00 2.23
8491 9810 8.267894 AGATGTTAGTGTATTTTGTCCAGCTAT 58.732 33.333 0.00 0.00 0.00 2.97
8493 9812 6.476378 AGATGTTAGTGTATTTTGTCCAGCT 58.524 36.000 0.00 0.00 0.00 4.24
8494 9813 6.743575 AGATGTTAGTGTATTTTGTCCAGC 57.256 37.500 0.00 0.00 0.00 4.85
8495 9814 7.549134 TGCTAGATGTTAGTGTATTTTGTCCAG 59.451 37.037 0.00 0.00 0.00 3.86
8496 9815 7.390823 TGCTAGATGTTAGTGTATTTTGTCCA 58.609 34.615 0.00 0.00 0.00 4.02
8497 9816 7.843490 TGCTAGATGTTAGTGTATTTTGTCC 57.157 36.000 0.00 0.00 0.00 4.02
8498 9817 7.905493 GCTTGCTAGATGTTAGTGTATTTTGTC 59.095 37.037 0.00 0.00 0.00 3.18
8500 10221 7.693951 GTGCTTGCTAGATGTTAGTGTATTTTG 59.306 37.037 0.00 0.00 0.00 2.44
8504 10225 5.977635 TGTGCTTGCTAGATGTTAGTGTAT 58.022 37.500 0.00 0.00 0.00 2.29
8505 10226 5.400066 TGTGCTTGCTAGATGTTAGTGTA 57.600 39.130 0.00 0.00 0.00 2.90
8506 10227 4.271696 TGTGCTTGCTAGATGTTAGTGT 57.728 40.909 0.00 0.00 0.00 3.55
8509 10230 6.486253 TTCTTTGTGCTTGCTAGATGTTAG 57.514 37.500 0.00 0.00 0.00 2.34
8511 10232 5.772825 TTTCTTTGTGCTTGCTAGATGTT 57.227 34.783 0.00 0.00 0.00 2.71
8515 10236 5.532406 AGTCAATTTCTTTGTGCTTGCTAGA 59.468 36.000 0.00 0.00 36.65 2.43
8516 10237 5.628193 CAGTCAATTTCTTTGTGCTTGCTAG 59.372 40.000 0.00 0.00 36.65 3.42
8517 10238 5.507817 CCAGTCAATTTCTTTGTGCTTGCTA 60.508 40.000 0.00 0.00 36.65 3.49
8518 10239 4.365723 CAGTCAATTTCTTTGTGCTTGCT 58.634 39.130 0.00 0.00 36.65 3.91
8522 10243 3.491447 GCACCAGTCAATTTCTTTGTGCT 60.491 43.478 16.33 0.00 36.65 4.40
8526 10247 3.318839 TCAGGCACCAGTCAATTTCTTTG 59.681 43.478 0.00 0.00 36.61 2.77
8528 10249 3.152341 CTCAGGCACCAGTCAATTTCTT 58.848 45.455 0.00 0.00 0.00 2.52
8544 10265 2.750657 GGGTGGAGATGCCCTCAGG 61.751 68.421 5.71 0.00 43.76 3.86
8545 10266 2.914289 GGGTGGAGATGCCCTCAG 59.086 66.667 5.71 0.00 43.76 3.35
8546 10267 3.083349 CGGGTGGAGATGCCCTCA 61.083 66.667 5.71 0.00 43.76 3.86
8547 10268 2.670148 AACGGGTGGAGATGCCCTC 61.670 63.158 0.00 0.00 42.67 4.30
8549 10270 2.438434 CAACGGGTGGAGATGCCC 60.438 66.667 0.00 0.00 41.45 5.36
8550 10271 3.134127 GCAACGGGTGGAGATGCC 61.134 66.667 0.00 0.00 37.10 4.40
8551 10272 3.134127 GGCAACGGGTGGAGATGC 61.134 66.667 0.00 0.00 36.31 3.91
8552 10273 2.438434 GGGCAACGGGTGGAGATG 60.438 66.667 0.00 0.00 37.60 2.90
8553 10274 3.728373 GGGGCAACGGGTGGAGAT 61.728 66.667 0.00 0.00 37.60 2.75
8572 10293 1.749258 GCTTTTAGACGCCCCCTGG 60.749 63.158 0.00 0.00 0.00 4.45
8575 10296 2.046604 ACGCTTTTAGACGCCCCC 60.047 61.111 0.00 0.00 0.00 5.40
8576 10297 2.450345 CGACGCTTTTAGACGCCCC 61.450 63.158 0.00 0.00 0.00 5.80
8578 10299 0.731855 AGACGACGCTTTTAGACGCC 60.732 55.000 0.00 0.00 0.00 5.68
8581 10302 1.347320 CCCAGACGACGCTTTTAGAC 58.653 55.000 0.00 0.00 0.00 2.59
8582 10303 0.245539 CCCCAGACGACGCTTTTAGA 59.754 55.000 0.00 0.00 0.00 2.10
8583 10304 0.245539 TCCCCAGACGACGCTTTTAG 59.754 55.000 0.00 0.00 0.00 1.85
8584 10305 0.899720 ATCCCCAGACGACGCTTTTA 59.100 50.000 0.00 0.00 0.00 1.52
8587 10308 1.949847 CTCATCCCCAGACGACGCTT 61.950 60.000 0.00 0.00 0.00 4.68
8588 10309 2.362503 TCATCCCCAGACGACGCT 60.363 61.111 0.00 0.00 0.00 5.07
8589 10310 2.105128 CTCATCCCCAGACGACGC 59.895 66.667 0.00 0.00 0.00 5.19
8590 10311 2.105128 GCTCATCCCCAGACGACG 59.895 66.667 0.00 0.00 0.00 5.12
8594 10315 4.554036 GCCGGCTCATCCCCAGAC 62.554 72.222 22.15 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.