Multiple sequence alignment - TraesCS2B01G193100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G193100 chr2B 100.000 2707 0 0 1 2707 168630685 168633391 0.000000e+00 5000.0
1 TraesCS2B01G193100 chr2A 99.056 1483 14 0 370 1852 607491710 607490228 0.000000e+00 2662.0
2 TraesCS2B01G193100 chr2A 83.736 455 31 14 2277 2704 119097178 119097616 9.090000e-105 390.0
3 TraesCS2B01G193100 chr2A 84.507 355 36 13 26 377 119096801 119097139 1.550000e-87 333.0
4 TraesCS2B01G193100 chr2A 93.443 61 3 1 1850 1909 119097124 119097184 3.710000e-14 89.8
5 TraesCS2B01G193100 chr5A 98.854 1483 17 0 370 1852 435708986 435710468 0.000000e+00 2645.0
6 TraesCS2B01G193100 chr1B 98.854 1483 17 0 370 1852 676771915 676770433 0.000000e+00 2645.0
7 TraesCS2B01G193100 chr1B 95.213 188 8 1 1926 2112 526342748 526342935 2.040000e-76 296.0
8 TraesCS2B01G193100 chr1B 95.628 183 8 0 1926 2108 36355390 36355572 7.330000e-76 294.0
9 TraesCS2B01G193100 chr4B 98.984 1476 15 0 377 1852 672924358 672925833 0.000000e+00 2643.0
10 TraesCS2B01G193100 chr4B 95.308 341 15 1 1513 1852 582069779 582069439 8.530000e-150 540.0
11 TraesCS2B01G193100 chr4B 96.111 180 7 0 1929 2108 649583380 649583201 7.330000e-76 294.0
12 TraesCS2B01G193100 chr4B 94.737 190 9 1 1926 2114 660752804 660752615 7.330000e-76 294.0
13 TraesCS2B01G193100 chr4B 94.211 190 10 1 1926 2114 252010605 252010794 3.410000e-74 289.0
14 TraesCS2B01G193100 chr4B 98.000 150 3 0 2130 2279 448308678 448308827 7.430000e-66 261.0
15 TraesCS2B01G193100 chr4B 98.000 150 3 0 2130 2279 670246777 670246926 7.430000e-66 261.0
16 TraesCS2B01G193100 chr3A 98.786 1483 18 0 370 1852 121401012 121402494 0.000000e+00 2639.0
17 TraesCS2B01G193100 chr3A 96.111 180 7 0 1929 2108 55256169 55255990 7.330000e-76 294.0
18 TraesCS2B01G193100 chr7A 98.968 1453 15 0 400 1852 38119435 38120887 0.000000e+00 2601.0
19 TraesCS2B01G193100 chr3D 97.237 1484 36 2 370 1852 33195065 33193586 0.000000e+00 2508.0
20 TraesCS2B01G193100 chr3D 75.253 396 90 8 1400 1791 300680197 300680588 5.950000e-42 182.0
21 TraesCS2B01G193100 chr7D 96.291 1483 55 0 370 1852 634673552 634675034 0.000000e+00 2435.0
22 TraesCS2B01G193100 chr6B 98.679 1287 17 0 566 1852 195303 194017 0.000000e+00 2283.0
23 TraesCS2B01G193100 chr6B 98.026 152 3 0 2130 2281 461898631 461898480 5.750000e-67 265.0
24 TraesCS2B01G193100 chr5D 94.659 674 18 2 1179 1851 399290526 399291182 0.000000e+00 1029.0
25 TraesCS2B01G193100 chr5D 75.641 312 64 12 1450 1756 519644726 519644422 7.810000e-31 145.0
26 TraesCS2B01G193100 chr6A 89.443 341 36 0 1510 1850 445711589 445711249 5.350000e-117 431.0
27 TraesCS2B01G193100 chr6A 94.686 207 11 0 1645 1851 56670660 56670454 3.360000e-84 322.0
28 TraesCS2B01G193100 chr2D 88.047 343 20 11 48 377 117849294 117849628 1.180000e-103 387.0
29 TraesCS2B01G193100 chr2D 94.009 217 9 2 2494 2707 117849907 117850122 2.600000e-85 326.0
30 TraesCS2B01G193100 chr2D 95.122 164 7 1 2130 2292 539902120 539902283 9.620000e-65 257.0
31 TraesCS2B01G193100 chr2D 86.957 230 17 9 2277 2501 117849667 117849888 2.080000e-61 246.0
32 TraesCS2B01G193100 chr2D 92.982 57 4 0 1850 1906 117849613 117849669 1.730000e-12 84.2
33 TraesCS2B01G193100 chr7B 95.288 191 7 2 1919 2108 129963628 129963817 4.380000e-78 302.0
34 TraesCS2B01G193100 chr5B 96.667 180 6 0 1929 2108 584167041 584166862 1.580000e-77 300.0
35 TraesCS2B01G193100 chr5B 98.649 148 2 0 2130 2277 24503165 24503312 2.070000e-66 263.0
36 TraesCS2B01G193100 chr5B 97.403 154 4 0 2130 2283 520633587 520633434 2.070000e-66 263.0
37 TraesCS2B01G193100 chr5B 98.000 150 3 0 2130 2279 407636407 407636556 7.430000e-66 261.0
38 TraesCS2B01G193100 chr3B 95.652 184 7 1 1926 2108 131528524 131528341 7.330000e-76 294.0
39 TraesCS2B01G193100 chr3B 98.026 152 2 1 2130 2280 279650860 279651011 2.070000e-66 263.0
40 TraesCS2B01G193100 chr3B 98.649 148 2 0 2130 2277 345017932 345018079 2.070000e-66 263.0
41 TraesCS2B01G193100 chr3B 94.828 116 6 0 370 485 727408063 727408178 5.950000e-42 182.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G193100 chr2B 168630685 168633391 2706 False 5000.000000 5000 100.000000 1 2707 1 chr2B.!!$F1 2706
1 TraesCS2B01G193100 chr2A 607490228 607491710 1482 True 2662.000000 2662 99.056000 370 1852 1 chr2A.!!$R1 1482
2 TraesCS2B01G193100 chr2A 119096801 119097616 815 False 270.933333 390 87.228667 26 2704 3 chr2A.!!$F1 2678
3 TraesCS2B01G193100 chr5A 435708986 435710468 1482 False 2645.000000 2645 98.854000 370 1852 1 chr5A.!!$F1 1482
4 TraesCS2B01G193100 chr1B 676770433 676771915 1482 True 2645.000000 2645 98.854000 370 1852 1 chr1B.!!$R1 1482
5 TraesCS2B01G193100 chr4B 672924358 672925833 1475 False 2643.000000 2643 98.984000 377 1852 1 chr4B.!!$F4 1475
6 TraesCS2B01G193100 chr3A 121401012 121402494 1482 False 2639.000000 2639 98.786000 370 1852 1 chr3A.!!$F1 1482
7 TraesCS2B01G193100 chr7A 38119435 38120887 1452 False 2601.000000 2601 98.968000 400 1852 1 chr7A.!!$F1 1452
8 TraesCS2B01G193100 chr3D 33193586 33195065 1479 True 2508.000000 2508 97.237000 370 1852 1 chr3D.!!$R1 1482
9 TraesCS2B01G193100 chr7D 634673552 634675034 1482 False 2435.000000 2435 96.291000 370 1852 1 chr7D.!!$F1 1482
10 TraesCS2B01G193100 chr6B 194017 195303 1286 True 2283.000000 2283 98.679000 566 1852 1 chr6B.!!$R1 1286
11 TraesCS2B01G193100 chr5D 399290526 399291182 656 False 1029.000000 1029 94.659000 1179 1851 1 chr5D.!!$F1 672
12 TraesCS2B01G193100 chr2D 117849294 117850122 828 False 260.800000 387 90.498750 48 2707 4 chr2D.!!$F2 2659

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
325 349 0.109342 CACAGCAACTCCCAGTTCCT 59.891 55.0 0.0 0.0 36.03 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1989 2219 0.105709 CCCAAAAAGTCCCACCCTGT 60.106 55.0 0.0 0.0 0.0 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 1.134075 CACTTGAGCTGATGCGTGC 59.866 57.895 0.00 0.00 45.42 5.34
59 60 3.058160 GCTGATGCGTGCCCTTGT 61.058 61.111 0.00 0.00 0.00 3.16
60 61 1.745115 GCTGATGCGTGCCCTTGTA 60.745 57.895 0.00 0.00 0.00 2.41
198 200 3.039588 TCCGTGCGGTCGCTTTTC 61.040 61.111 16.36 4.16 42.51 2.29
232 247 1.726853 GTCATACTGACACAGGTGCC 58.273 55.000 0.00 0.00 46.22 5.01
262 277 0.458543 CGCGGTGTGTATGCTCTTCT 60.459 55.000 0.00 0.00 0.00 2.85
316 340 1.975407 AGCATGGCCACAGCAACTC 60.975 57.895 28.00 4.52 42.56 3.01
320 344 2.674380 GGCCACAGCAACTCCCAG 60.674 66.667 0.00 0.00 42.56 4.45
325 349 0.109342 CACAGCAACTCCCAGTTCCT 59.891 55.000 0.00 0.00 36.03 3.36
798 822 0.250124 ATGGTCGCCGTTCTTGTTGA 60.250 50.000 0.00 0.00 0.00 3.18
1075 1099 3.282021 GAATGGCTGCTTCATGTCCTTA 58.718 45.455 0.00 0.00 0.00 2.69
1392 1417 2.627699 TGATGGGTCCTTTGCAGAAAAC 59.372 45.455 0.00 0.00 0.00 2.43
1868 2098 4.861102 AAAAAGATGCTTCAGGAACAGG 57.139 40.909 2.07 0.00 0.00 4.00
1869 2099 1.831580 AAGATGCTTCAGGAACAGGC 58.168 50.000 2.07 0.00 0.00 4.85
1870 2100 0.694771 AGATGCTTCAGGAACAGGCA 59.305 50.000 2.07 0.00 37.32 4.75
1871 2101 0.807496 GATGCTTCAGGAACAGGCAC 59.193 55.000 0.00 0.00 35.72 5.01
1872 2102 0.403271 ATGCTTCAGGAACAGGCACT 59.597 50.000 0.00 0.00 43.88 4.40
1873 2103 1.055849 TGCTTCAGGAACAGGCACTA 58.944 50.000 0.00 0.00 36.02 2.74
1874 2104 1.419762 TGCTTCAGGAACAGGCACTAA 59.580 47.619 0.00 0.00 36.02 2.24
1875 2105 2.040278 TGCTTCAGGAACAGGCACTAAT 59.960 45.455 0.00 0.00 36.02 1.73
1876 2106 3.084786 GCTTCAGGAACAGGCACTAATT 58.915 45.455 0.00 0.00 36.02 1.40
1877 2107 3.507622 GCTTCAGGAACAGGCACTAATTT 59.492 43.478 0.00 0.00 36.02 1.82
1878 2108 4.021981 GCTTCAGGAACAGGCACTAATTTT 60.022 41.667 0.00 0.00 36.02 1.82
1879 2109 5.452078 TTCAGGAACAGGCACTAATTTTG 57.548 39.130 0.00 0.00 36.02 2.44
1880 2110 4.724399 TCAGGAACAGGCACTAATTTTGA 58.276 39.130 0.00 0.00 36.02 2.69
1881 2111 5.324409 TCAGGAACAGGCACTAATTTTGAT 58.676 37.500 0.00 0.00 36.02 2.57
1882 2112 5.183713 TCAGGAACAGGCACTAATTTTGATG 59.816 40.000 0.00 0.00 36.02 3.07
1883 2113 4.082026 AGGAACAGGCACTAATTTTGATGC 60.082 41.667 0.00 0.00 36.02 3.91
1884 2114 4.321899 GGAACAGGCACTAATTTTGATGCA 60.322 41.667 0.00 0.00 39.92 3.96
1885 2115 4.445452 ACAGGCACTAATTTTGATGCAG 57.555 40.909 0.00 0.00 39.92 4.41
1886 2116 3.184541 CAGGCACTAATTTTGATGCAGC 58.815 45.455 0.00 0.00 39.92 5.25
1887 2117 2.167075 AGGCACTAATTTTGATGCAGCC 59.833 45.455 0.00 0.00 39.92 4.85
1888 2118 2.094078 GGCACTAATTTTGATGCAGCCA 60.094 45.455 0.00 0.00 39.92 4.75
1889 2119 3.184541 GCACTAATTTTGATGCAGCCAG 58.815 45.455 0.00 0.00 38.00 4.85
1890 2120 3.184541 CACTAATTTTGATGCAGCCAGC 58.815 45.455 0.00 0.00 45.96 4.85
1891 2121 3.094572 ACTAATTTTGATGCAGCCAGCT 58.905 40.909 0.00 0.00 45.94 4.24
1892 2122 3.512724 ACTAATTTTGATGCAGCCAGCTT 59.487 39.130 0.00 0.00 45.94 3.74
1893 2123 4.706476 ACTAATTTTGATGCAGCCAGCTTA 59.294 37.500 0.00 0.00 45.94 3.09
1894 2124 4.748277 AATTTTGATGCAGCCAGCTTAT 57.252 36.364 0.00 0.00 45.94 1.73
1895 2125 3.788333 TTTTGATGCAGCCAGCTTATC 57.212 42.857 0.00 6.68 45.94 1.75
1896 2126 1.302366 TTGATGCAGCCAGCTTATCG 58.698 50.000 0.00 0.00 45.94 2.92
1897 2127 0.465287 TGATGCAGCCAGCTTATCGA 59.535 50.000 0.00 0.00 45.94 3.59
1898 2128 1.146637 GATGCAGCCAGCTTATCGAG 58.853 55.000 0.00 0.00 45.94 4.04
1899 2129 0.467384 ATGCAGCCAGCTTATCGAGT 59.533 50.000 0.00 0.00 45.94 4.18
1900 2130 0.250234 TGCAGCCAGCTTATCGAGTT 59.750 50.000 0.00 0.00 45.94 3.01
1901 2131 0.654683 GCAGCCAGCTTATCGAGTTG 59.345 55.000 0.00 0.00 41.15 3.16
1902 2132 2.009042 GCAGCCAGCTTATCGAGTTGT 61.009 52.381 0.00 0.00 41.15 3.32
1903 2133 2.350522 CAGCCAGCTTATCGAGTTGTT 58.649 47.619 0.00 0.00 35.04 2.83
1904 2134 2.744202 CAGCCAGCTTATCGAGTTGTTT 59.256 45.455 0.00 0.00 35.04 2.83
1905 2135 3.932710 CAGCCAGCTTATCGAGTTGTTTA 59.067 43.478 0.00 0.00 35.04 2.01
1906 2136 4.033358 CAGCCAGCTTATCGAGTTGTTTAG 59.967 45.833 0.00 0.00 35.04 1.85
1907 2137 4.081642 AGCCAGCTTATCGAGTTGTTTAGA 60.082 41.667 0.00 0.00 35.04 2.10
1908 2138 4.033014 GCCAGCTTATCGAGTTGTTTAGAC 59.967 45.833 0.00 0.00 35.04 2.59
1909 2139 5.411781 CCAGCTTATCGAGTTGTTTAGACT 58.588 41.667 0.00 0.00 35.04 3.24
1910 2140 6.561614 CCAGCTTATCGAGTTGTTTAGACTA 58.438 40.000 0.00 0.00 35.04 2.59
1911 2141 6.693545 CCAGCTTATCGAGTTGTTTAGACTAG 59.306 42.308 0.00 0.00 35.04 2.57
1912 2142 7.251994 CAGCTTATCGAGTTGTTTAGACTAGT 58.748 38.462 0.00 0.00 32.46 2.57
1913 2143 7.429920 CAGCTTATCGAGTTGTTTAGACTAGTC 59.570 40.741 15.41 15.41 32.46 2.59
1914 2144 7.120873 AGCTTATCGAGTTGTTTAGACTAGTCA 59.879 37.037 24.44 8.16 32.61 3.41
1915 2145 7.218583 GCTTATCGAGTTGTTTAGACTAGTCAC 59.781 40.741 24.44 14.29 32.61 3.67
1916 2146 6.570672 ATCGAGTTGTTTAGACTAGTCACA 57.429 37.500 24.44 16.65 32.61 3.58
1917 2147 6.381481 TCGAGTTGTTTAGACTAGTCACAA 57.619 37.500 24.44 21.01 32.61 3.33
1918 2148 6.978338 TCGAGTTGTTTAGACTAGTCACAAT 58.022 36.000 24.44 14.42 32.61 2.71
1919 2149 6.861572 TCGAGTTGTTTAGACTAGTCACAATG 59.138 38.462 24.44 17.14 32.61 2.82
1920 2150 6.089551 CGAGTTGTTTAGACTAGTCACAATGG 59.910 42.308 24.44 13.90 32.61 3.16
1921 2151 7.062749 AGTTGTTTAGACTAGTCACAATGGA 57.937 36.000 24.44 3.18 29.72 3.41
1922 2152 7.155328 AGTTGTTTAGACTAGTCACAATGGAG 58.845 38.462 24.44 0.00 29.72 3.86
1923 2153 6.911250 TGTTTAGACTAGTCACAATGGAGA 57.089 37.500 24.44 0.83 0.00 3.71
1924 2154 6.925211 TGTTTAGACTAGTCACAATGGAGAG 58.075 40.000 24.44 0.00 0.00 3.20
1925 2155 6.493802 TGTTTAGACTAGTCACAATGGAGAGT 59.506 38.462 24.44 2.07 0.00 3.24
1926 2156 7.668469 TGTTTAGACTAGTCACAATGGAGAGTA 59.332 37.037 24.44 1.11 0.00 2.59
1927 2157 8.521176 GTTTAGACTAGTCACAATGGAGAGTAA 58.479 37.037 24.44 7.10 0.00 2.24
1928 2158 6.767524 AGACTAGTCACAATGGAGAGTAAG 57.232 41.667 24.44 0.00 0.00 2.34
1929 2159 5.654650 AGACTAGTCACAATGGAGAGTAAGG 59.345 44.000 24.44 0.00 0.00 2.69
1930 2160 4.712337 ACTAGTCACAATGGAGAGTAAGGG 59.288 45.833 0.00 0.00 0.00 3.95
1931 2161 2.840651 AGTCACAATGGAGAGTAAGGGG 59.159 50.000 0.00 0.00 0.00 4.79
1932 2162 2.572104 GTCACAATGGAGAGTAAGGGGT 59.428 50.000 0.00 0.00 0.00 4.95
1933 2163 2.571653 TCACAATGGAGAGTAAGGGGTG 59.428 50.000 0.00 0.00 0.00 4.61
1934 2164 2.305927 CACAATGGAGAGTAAGGGGTGT 59.694 50.000 0.00 0.00 0.00 4.16
1935 2165 2.986728 ACAATGGAGAGTAAGGGGTGTT 59.013 45.455 0.00 0.00 0.00 3.32
1936 2166 3.397955 ACAATGGAGAGTAAGGGGTGTTT 59.602 43.478 0.00 0.00 0.00 2.83
1937 2167 3.721087 ATGGAGAGTAAGGGGTGTTTG 57.279 47.619 0.00 0.00 0.00 2.93
1938 2168 2.414612 TGGAGAGTAAGGGGTGTTTGT 58.585 47.619 0.00 0.00 0.00 2.83
1939 2169 2.781174 TGGAGAGTAAGGGGTGTTTGTT 59.219 45.455 0.00 0.00 0.00 2.83
1940 2170 3.203487 TGGAGAGTAAGGGGTGTTTGTTT 59.797 43.478 0.00 0.00 0.00 2.83
1941 2171 3.819337 GGAGAGTAAGGGGTGTTTGTTTC 59.181 47.826 0.00 0.00 0.00 2.78
1942 2172 4.457466 GAGAGTAAGGGGTGTTTGTTTCA 58.543 43.478 0.00 0.00 0.00 2.69
1943 2173 4.862371 AGAGTAAGGGGTGTTTGTTTCAA 58.138 39.130 0.00 0.00 0.00 2.69
1944 2174 4.887655 AGAGTAAGGGGTGTTTGTTTCAAG 59.112 41.667 0.00 0.00 0.00 3.02
1945 2175 3.958147 AGTAAGGGGTGTTTGTTTCAAGG 59.042 43.478 0.00 0.00 0.00 3.61
1946 2176 1.788229 AGGGGTGTTTGTTTCAAGGG 58.212 50.000 0.00 0.00 0.00 3.95
1947 2177 1.289530 AGGGGTGTTTGTTTCAAGGGA 59.710 47.619 0.00 0.00 0.00 4.20
1948 2178 1.411246 GGGGTGTTTGTTTCAAGGGAC 59.589 52.381 0.00 0.00 0.00 4.46
1962 2192 2.971901 AGGGACTTTTTGGTGTAGGG 57.028 50.000 0.00 0.00 27.25 3.53
1963 2193 2.424793 AGGGACTTTTTGGTGTAGGGA 58.575 47.619 0.00 0.00 27.25 4.20
1964 2194 2.107726 AGGGACTTTTTGGTGTAGGGAC 59.892 50.000 0.00 0.00 27.25 4.46
1965 2195 2.107726 GGGACTTTTTGGTGTAGGGACT 59.892 50.000 0.00 0.00 46.37 3.85
1966 2196 3.328637 GGGACTTTTTGGTGTAGGGACTA 59.671 47.826 0.00 0.00 41.75 2.59
1967 2197 4.565028 GGGACTTTTTGGTGTAGGGACTAG 60.565 50.000 0.00 0.00 44.14 2.57
1968 2198 4.285260 GGACTTTTTGGTGTAGGGACTAGA 59.715 45.833 0.00 0.00 44.14 2.43
1969 2199 5.221783 GGACTTTTTGGTGTAGGGACTAGAA 60.222 44.000 0.00 0.00 44.14 2.10
1970 2200 6.256643 ACTTTTTGGTGTAGGGACTAGAAA 57.743 37.500 0.00 0.00 44.14 2.52
1971 2201 6.665695 ACTTTTTGGTGTAGGGACTAGAAAA 58.334 36.000 0.00 0.00 44.14 2.29
1972 2202 7.120716 ACTTTTTGGTGTAGGGACTAGAAAAA 58.879 34.615 0.00 0.00 44.14 1.94
1973 2203 7.284716 ACTTTTTGGTGTAGGGACTAGAAAAAG 59.715 37.037 0.00 0.00 44.14 2.27
1974 2204 5.899631 TTGGTGTAGGGACTAGAAAAAGT 57.100 39.130 0.00 0.00 44.14 2.66
1975 2205 5.899631 TGGTGTAGGGACTAGAAAAAGTT 57.100 39.130 0.00 0.00 44.14 2.66
1976 2206 6.256643 TGGTGTAGGGACTAGAAAAAGTTT 57.743 37.500 0.00 0.00 44.14 2.66
1977 2207 6.293698 TGGTGTAGGGACTAGAAAAAGTTTC 58.706 40.000 0.00 0.00 44.14 2.78
1978 2208 6.100714 TGGTGTAGGGACTAGAAAAAGTTTCT 59.899 38.462 8.23 8.23 44.14 2.52
1979 2209 7.290714 TGGTGTAGGGACTAGAAAAAGTTTCTA 59.709 37.037 9.48 9.48 44.14 2.10
1990 2220 7.827819 AGAAAAAGTTTCTAGCAAACCAAAC 57.172 32.000 1.40 4.85 0.00 2.93
1991 2221 7.382898 AGAAAAAGTTTCTAGCAAACCAAACA 58.617 30.769 1.40 0.00 32.20 2.83
1992 2222 7.545615 AGAAAAAGTTTCTAGCAAACCAAACAG 59.454 33.333 1.40 0.00 32.20 3.16
1993 2223 4.918810 AGTTTCTAGCAAACCAAACAGG 57.081 40.909 11.70 0.00 45.67 4.00
1994 2224 3.636764 AGTTTCTAGCAAACCAAACAGGG 59.363 43.478 11.70 0.00 43.89 4.45
1995 2225 3.306472 TTCTAGCAAACCAAACAGGGT 57.694 42.857 0.00 0.00 45.04 4.34
1996 2226 2.582052 TCTAGCAAACCAAACAGGGTG 58.418 47.619 0.00 0.00 41.32 4.61
1997 2227 1.613437 CTAGCAAACCAAACAGGGTGG 59.387 52.381 0.00 0.00 41.32 4.61
1998 2228 1.048160 AGCAAACCAAACAGGGTGGG 61.048 55.000 0.00 0.00 41.32 4.61
1999 2229 1.045911 GCAAACCAAACAGGGTGGGA 61.046 55.000 0.00 0.00 41.32 4.37
2000 2230 0.750249 CAAACCAAACAGGGTGGGAC 59.250 55.000 0.00 0.00 41.32 4.46
2001 2231 0.634465 AAACCAAACAGGGTGGGACT 59.366 50.000 0.00 0.00 41.32 3.85
2002 2232 0.634465 AACCAAACAGGGTGGGACTT 59.366 50.000 0.00 0.00 41.32 3.01
2003 2233 0.634465 ACCAAACAGGGTGGGACTTT 59.366 50.000 0.00 0.00 43.89 2.66
2004 2234 1.007842 ACCAAACAGGGTGGGACTTTT 59.992 47.619 0.00 0.00 43.89 2.27
2005 2235 2.115427 CCAAACAGGGTGGGACTTTTT 58.885 47.619 0.00 0.00 32.03 1.94
2006 2236 2.158971 CCAAACAGGGTGGGACTTTTTG 60.159 50.000 0.00 0.00 36.11 2.44
2007 2237 1.788229 AACAGGGTGGGACTTTTTGG 58.212 50.000 0.00 0.00 0.00 3.28
2008 2238 0.105709 ACAGGGTGGGACTTTTTGGG 60.106 55.000 0.00 0.00 0.00 4.12
2009 2239 0.831711 CAGGGTGGGACTTTTTGGGG 60.832 60.000 0.00 0.00 0.00 4.96
2010 2240 1.002242 AGGGTGGGACTTTTTGGGGA 61.002 55.000 0.00 0.00 0.00 4.81
2011 2241 0.830444 GGGTGGGACTTTTTGGGGAC 60.830 60.000 0.00 0.00 0.00 4.46
2012 2242 0.187606 GGTGGGACTTTTTGGGGACT 59.812 55.000 0.00 0.00 0.00 3.85
2013 2243 1.412505 GGTGGGACTTTTTGGGGACTT 60.413 52.381 0.00 0.00 0.00 3.01
2014 2244 2.394632 GTGGGACTTTTTGGGGACTTT 58.605 47.619 0.00 0.00 0.00 2.66
2015 2245 2.769663 GTGGGACTTTTTGGGGACTTTT 59.230 45.455 0.00 0.00 0.00 2.27
2016 2246 3.199071 GTGGGACTTTTTGGGGACTTTTT 59.801 43.478 0.00 0.00 0.00 1.94
2017 2247 3.198853 TGGGACTTTTTGGGGACTTTTTG 59.801 43.478 0.00 0.00 0.00 2.44
2018 2248 3.202906 GGACTTTTTGGGGACTTTTTGC 58.797 45.455 0.00 0.00 0.00 3.68
2019 2249 3.118408 GGACTTTTTGGGGACTTTTTGCT 60.118 43.478 0.00 0.00 0.00 3.91
2020 2250 4.100344 GGACTTTTTGGGGACTTTTTGCTA 59.900 41.667 0.00 0.00 0.00 3.49
2021 2251 5.395879 GGACTTTTTGGGGACTTTTTGCTAA 60.396 40.000 0.00 0.00 0.00 3.09
2022 2252 6.056090 ACTTTTTGGGGACTTTTTGCTAAA 57.944 33.333 0.00 0.00 0.00 1.85
2023 2253 6.477253 ACTTTTTGGGGACTTTTTGCTAAAA 58.523 32.000 5.93 5.93 0.00 1.52
2035 2265 7.859613 CTTTTTGCTAAAAGTCCTTAGAAGC 57.140 36.000 20.79 0.00 43.34 3.86
2036 2266 6.952773 TTTTGCTAAAAGTCCTTAGAAGCA 57.047 33.333 6.73 6.73 31.59 3.91
2037 2267 5.941948 TTGCTAAAAGTCCTTAGAAGCAC 57.058 39.130 9.21 0.00 31.59 4.40
2038 2268 4.324267 TGCTAAAAGTCCTTAGAAGCACC 58.676 43.478 6.73 0.00 31.59 5.01
2039 2269 4.041691 TGCTAAAAGTCCTTAGAAGCACCT 59.958 41.667 6.73 0.00 31.59 4.00
2040 2270 4.393371 GCTAAAAGTCCTTAGAAGCACCTG 59.607 45.833 0.00 0.00 31.59 4.00
2041 2271 2.481289 AAGTCCTTAGAAGCACCTGC 57.519 50.000 0.00 0.00 42.49 4.85
2052 2282 3.621953 GCACCTGCTTGAGAGTCTT 57.378 52.632 0.00 0.00 38.21 3.01
2053 2283 1.889545 GCACCTGCTTGAGAGTCTTT 58.110 50.000 0.00 0.00 38.21 2.52
2054 2284 2.225467 GCACCTGCTTGAGAGTCTTTT 58.775 47.619 0.00 0.00 38.21 2.27
2055 2285 2.620585 GCACCTGCTTGAGAGTCTTTTT 59.379 45.455 0.00 0.00 38.21 1.94
2056 2286 3.304324 GCACCTGCTTGAGAGTCTTTTTC 60.304 47.826 0.00 0.00 38.21 2.29
2057 2287 3.879295 CACCTGCTTGAGAGTCTTTTTCA 59.121 43.478 0.00 0.00 0.00 2.69
2058 2288 4.336433 CACCTGCTTGAGAGTCTTTTTCAA 59.664 41.667 0.00 0.00 0.00 2.69
2059 2289 4.949856 ACCTGCTTGAGAGTCTTTTTCAAA 59.050 37.500 0.00 0.00 31.11 2.69
2060 2290 5.418840 ACCTGCTTGAGAGTCTTTTTCAAAA 59.581 36.000 0.00 0.00 31.11 2.44
2061 2291 6.071391 ACCTGCTTGAGAGTCTTTTTCAAAAA 60.071 34.615 0.00 0.00 31.11 1.94
2062 2292 6.474751 CCTGCTTGAGAGTCTTTTTCAAAAAG 59.525 38.462 15.46 15.46 31.11 2.27
2063 2293 6.924111 TGCTTGAGAGTCTTTTTCAAAAAGT 58.076 32.000 19.82 4.20 31.11 2.66
2064 2294 7.029563 TGCTTGAGAGTCTTTTTCAAAAAGTC 58.970 34.615 19.82 15.25 31.11 3.01
2065 2295 6.473778 GCTTGAGAGTCTTTTTCAAAAAGTCC 59.526 38.462 19.82 12.77 31.11 3.85
2066 2296 6.451064 TGAGAGTCTTTTTCAAAAAGTCCC 57.549 37.500 19.82 7.71 0.00 4.46
2067 2297 5.949354 TGAGAGTCTTTTTCAAAAAGTCCCA 59.051 36.000 19.82 7.68 0.00 4.37
2068 2298 6.095440 TGAGAGTCTTTTTCAAAAAGTCCCAG 59.905 38.462 19.82 0.00 0.00 4.45
2069 2299 5.360999 AGAGTCTTTTTCAAAAAGTCCCAGG 59.639 40.000 19.82 0.00 0.00 4.45
2070 2300 4.405680 AGTCTTTTTCAAAAAGTCCCAGGG 59.594 41.667 19.82 0.00 0.00 4.45
2071 2301 4.161565 GTCTTTTTCAAAAAGTCCCAGGGT 59.838 41.667 19.82 0.00 0.00 4.34
2072 2302 4.404394 TCTTTTTCAAAAAGTCCCAGGGTC 59.596 41.667 19.82 0.00 0.00 4.46
2073 2303 3.680777 TTTCAAAAAGTCCCAGGGTCT 57.319 42.857 5.01 1.37 0.00 3.85
2074 2304 4.799715 TTTCAAAAAGTCCCAGGGTCTA 57.200 40.909 5.56 0.00 0.00 2.59
2075 2305 4.367039 TTCAAAAAGTCCCAGGGTCTAG 57.633 45.455 5.56 0.00 0.00 2.43
2076 2306 3.593942 TCAAAAAGTCCCAGGGTCTAGA 58.406 45.455 5.56 0.02 0.00 2.43
2077 2307 3.977999 TCAAAAAGTCCCAGGGTCTAGAA 59.022 43.478 5.56 0.00 0.00 2.10
2078 2308 4.414182 TCAAAAAGTCCCAGGGTCTAGAAA 59.586 41.667 5.56 0.00 0.00 2.52
2079 2309 5.103855 TCAAAAAGTCCCAGGGTCTAGAAAA 60.104 40.000 5.56 0.00 0.00 2.29
2080 2310 5.397553 AAAAGTCCCAGGGTCTAGAAAAA 57.602 39.130 5.56 0.00 0.00 1.94
2081 2311 4.642466 AAGTCCCAGGGTCTAGAAAAAG 57.358 45.455 5.56 0.00 0.00 2.27
2082 2312 3.599348 AGTCCCAGGGTCTAGAAAAAGT 58.401 45.455 5.01 0.00 0.00 2.66
2083 2313 3.583526 AGTCCCAGGGTCTAGAAAAAGTC 59.416 47.826 5.01 0.00 0.00 3.01
2084 2314 2.910977 TCCCAGGGTCTAGAAAAAGTCC 59.089 50.000 5.01 0.00 0.00 3.85
2085 2315 2.913617 CCCAGGGTCTAGAAAAAGTCCT 59.086 50.000 0.00 0.00 0.00 3.85
2086 2316 4.101856 CCCAGGGTCTAGAAAAAGTCCTA 58.898 47.826 0.00 0.00 0.00 2.94
2087 2317 4.162509 CCCAGGGTCTAGAAAAAGTCCTAG 59.837 50.000 0.00 0.00 35.02 3.02
2088 2318 4.162509 CCAGGGTCTAGAAAAAGTCCTAGG 59.837 50.000 0.82 0.82 34.59 3.02
2089 2319 5.024118 CAGGGTCTAGAAAAAGTCCTAGGA 58.976 45.833 7.62 7.62 34.59 2.94
2090 2320 5.024785 AGGGTCTAGAAAAAGTCCTAGGAC 58.975 45.833 31.29 31.29 44.86 3.85
2104 2334 6.342338 GTCCTAGGACTAGAGAAACAAACA 57.658 41.667 31.12 0.00 41.57 2.83
2105 2335 6.157904 GTCCTAGGACTAGAGAAACAAACAC 58.842 44.000 31.12 2.21 41.57 3.32
2106 2336 5.245526 TCCTAGGACTAGAGAAACAAACACC 59.754 44.000 7.62 0.00 35.21 4.16
2107 2337 5.011738 CCTAGGACTAGAGAAACAAACACCA 59.988 44.000 1.05 0.00 35.21 4.17
2108 2338 5.568620 AGGACTAGAGAAACAAACACCAT 57.431 39.130 0.00 0.00 0.00 3.55
2109 2339 5.941788 AGGACTAGAGAAACAAACACCATT 58.058 37.500 0.00 0.00 0.00 3.16
2110 2340 6.365520 AGGACTAGAGAAACAAACACCATTT 58.634 36.000 0.00 0.00 0.00 2.32
2111 2341 7.514721 AGGACTAGAGAAACAAACACCATTTA 58.485 34.615 0.00 0.00 0.00 1.40
2112 2342 7.996644 AGGACTAGAGAAACAAACACCATTTAA 59.003 33.333 0.00 0.00 0.00 1.52
2113 2343 8.074370 GGACTAGAGAAACAAACACCATTTAAC 58.926 37.037 0.00 0.00 0.00 2.01
2114 2344 8.514330 ACTAGAGAAACAAACACCATTTAACA 57.486 30.769 0.00 0.00 0.00 2.41
2115 2345 9.131791 ACTAGAGAAACAAACACCATTTAACAT 57.868 29.630 0.00 0.00 0.00 2.71
2118 2348 8.908903 AGAGAAACAAACACCATTTAACATACA 58.091 29.630 0.00 0.00 0.00 2.29
2119 2349 8.865590 AGAAACAAACACCATTTAACATACAC 57.134 30.769 0.00 0.00 0.00 2.90
2120 2350 8.691797 AGAAACAAACACCATTTAACATACACT 58.308 29.630 0.00 0.00 0.00 3.55
2121 2351 9.953697 GAAACAAACACCATTTAACATACACTA 57.046 29.630 0.00 0.00 0.00 2.74
2122 2352 9.959749 AAACAAACACCATTTAACATACACTAG 57.040 29.630 0.00 0.00 0.00 2.57
2123 2353 8.685838 ACAAACACCATTTAACATACACTAGT 57.314 30.769 0.00 0.00 0.00 2.57
2124 2354 9.781633 ACAAACACCATTTAACATACACTAGTA 57.218 29.630 0.00 0.00 34.10 1.82
2127 2357 9.781633 AACACCATTTAACATACACTAGTAACA 57.218 29.630 0.00 0.00 33.13 2.41
2128 2358 9.953565 ACACCATTTAACATACACTAGTAACAT 57.046 29.630 0.00 0.00 33.13 2.71
2144 2374 9.494271 ACTAGTAACATACTCATATTGCATTGG 57.506 33.333 0.00 0.00 40.14 3.16
2145 2375 7.750229 AGTAACATACTCATATTGCATTGGG 57.250 36.000 0.00 0.00 32.47 4.12
2146 2376 7.517320 AGTAACATACTCATATTGCATTGGGA 58.483 34.615 0.00 0.00 32.47 4.37
2147 2377 6.639632 AACATACTCATATTGCATTGGGAC 57.360 37.500 0.00 0.00 0.00 4.46
2148 2378 5.693961 ACATACTCATATTGCATTGGGACA 58.306 37.500 0.00 0.00 0.00 4.02
2149 2379 6.309357 ACATACTCATATTGCATTGGGACAT 58.691 36.000 0.00 0.00 39.30 3.06
2150 2380 6.208007 ACATACTCATATTGCATTGGGACATG 59.792 38.462 0.00 0.00 39.30 3.21
2151 2381 4.539726 ACTCATATTGCATTGGGACATGT 58.460 39.130 0.00 0.00 39.30 3.21
2152 2382 4.340097 ACTCATATTGCATTGGGACATGTG 59.660 41.667 1.15 0.00 39.30 3.21
2153 2383 4.534797 TCATATTGCATTGGGACATGTGA 58.465 39.130 1.15 0.00 39.30 3.58
2154 2384 5.141910 TCATATTGCATTGGGACATGTGAT 58.858 37.500 1.15 0.00 39.30 3.06
2155 2385 3.812156 ATTGCATTGGGACATGTGATG 57.188 42.857 1.15 3.48 39.30 3.07
2157 2387 2.527497 TGCATTGGGACATGTGATGTT 58.473 42.857 1.15 0.00 45.03 2.71
2158 2388 3.694926 TGCATTGGGACATGTGATGTTA 58.305 40.909 1.15 0.00 45.03 2.41
2159 2389 3.443329 TGCATTGGGACATGTGATGTTAC 59.557 43.478 1.15 0.00 45.03 2.50
2160 2390 3.443329 GCATTGGGACATGTGATGTTACA 59.557 43.478 1.15 0.00 45.03 2.41
2161 2391 4.439153 GCATTGGGACATGTGATGTTACAG 60.439 45.833 1.15 0.00 45.03 2.74
2162 2392 4.365514 TTGGGACATGTGATGTTACAGT 57.634 40.909 1.15 0.00 45.03 3.55
2163 2393 5.491323 TTGGGACATGTGATGTTACAGTA 57.509 39.130 1.15 0.00 45.03 2.74
2164 2394 5.491323 TGGGACATGTGATGTTACAGTAA 57.509 39.130 1.15 0.00 45.03 2.24
2165 2395 5.242434 TGGGACATGTGATGTTACAGTAAC 58.758 41.667 15.58 15.58 45.03 2.50
2166 2396 5.012664 TGGGACATGTGATGTTACAGTAACT 59.987 40.000 21.56 9.41 45.03 2.24
2167 2397 6.211785 TGGGACATGTGATGTTACAGTAACTA 59.788 38.462 21.56 10.50 45.03 2.24
2168 2398 6.757010 GGGACATGTGATGTTACAGTAACTAG 59.243 42.308 21.56 8.25 45.03 2.57
2169 2399 6.255887 GGACATGTGATGTTACAGTAACTAGC 59.744 42.308 21.56 12.59 45.03 3.42
2170 2400 6.936279 ACATGTGATGTTACAGTAACTAGCT 58.064 36.000 21.56 6.57 41.63 3.32
2171 2401 8.063200 ACATGTGATGTTACAGTAACTAGCTA 57.937 34.615 21.56 4.25 41.63 3.32
2172 2402 8.528643 ACATGTGATGTTACAGTAACTAGCTAA 58.471 33.333 21.56 3.59 41.63 3.09
2173 2403 9.025020 CATGTGATGTTACAGTAACTAGCTAAG 57.975 37.037 21.56 6.36 39.38 2.18
2174 2404 8.118976 TGTGATGTTACAGTAACTAGCTAAGT 57.881 34.615 21.56 0.00 41.49 2.24
2209 2439 9.585099 CTATATCTCTCCTCATTAACTCATTGC 57.415 37.037 0.00 0.00 0.00 3.56
2210 2440 5.028549 TCTCTCCTCATTAACTCATTGCC 57.971 43.478 0.00 0.00 0.00 4.52
2211 2441 4.471025 TCTCTCCTCATTAACTCATTGCCA 59.529 41.667 0.00 0.00 0.00 4.92
2212 2442 4.517285 TCTCCTCATTAACTCATTGCCAC 58.483 43.478 0.00 0.00 0.00 5.01
2213 2443 4.019411 TCTCCTCATTAACTCATTGCCACA 60.019 41.667 0.00 0.00 0.00 4.17
2214 2444 4.858850 TCCTCATTAACTCATTGCCACAT 58.141 39.130 0.00 0.00 0.00 3.21
2215 2445 6.000246 TCCTCATTAACTCATTGCCACATA 58.000 37.500 0.00 0.00 0.00 2.29
2216 2446 6.422333 TCCTCATTAACTCATTGCCACATAA 58.578 36.000 0.00 0.00 0.00 1.90
2217 2447 6.543465 TCCTCATTAACTCATTGCCACATAAG 59.457 38.462 0.00 0.00 0.00 1.73
2218 2448 6.135290 TCATTAACTCATTGCCACATAAGC 57.865 37.500 0.00 0.00 0.00 3.09
2219 2449 5.651576 TCATTAACTCATTGCCACATAAGCA 59.348 36.000 0.00 0.00 38.81 3.91
2251 2481 5.686159 AGTTGGACTCGATATTACTACCG 57.314 43.478 0.00 0.00 0.00 4.02
2252 2482 5.371526 AGTTGGACTCGATATTACTACCGA 58.628 41.667 0.00 0.00 0.00 4.69
2253 2483 5.824624 AGTTGGACTCGATATTACTACCGAA 59.175 40.000 0.00 0.00 0.00 4.30
2254 2484 5.936686 TGGACTCGATATTACTACCGAAG 57.063 43.478 0.00 0.00 0.00 3.79
2255 2485 5.371526 TGGACTCGATATTACTACCGAAGT 58.628 41.667 0.00 0.00 42.62 3.01
2256 2486 5.824624 TGGACTCGATATTACTACCGAAGTT 59.175 40.000 0.00 0.00 39.80 2.66
2257 2487 6.992123 TGGACTCGATATTACTACCGAAGTTA 59.008 38.462 0.00 0.00 39.80 2.24
2258 2488 7.041780 TGGACTCGATATTACTACCGAAGTTAC 60.042 40.741 0.00 0.00 39.80 2.50
2259 2489 7.172361 GGACTCGATATTACTACCGAAGTTACT 59.828 40.741 0.00 0.00 39.80 2.24
2260 2490 8.082334 ACTCGATATTACTACCGAAGTTACTC 57.918 38.462 0.00 0.00 39.80 2.59
2261 2491 7.172361 ACTCGATATTACTACCGAAGTTACTCC 59.828 40.741 0.00 0.00 39.80 3.85
2262 2492 6.428159 TCGATATTACTACCGAAGTTACTCCC 59.572 42.308 0.00 0.00 39.80 4.30
2263 2493 6.205464 CGATATTACTACCGAAGTTACTCCCA 59.795 42.308 0.00 0.00 39.80 4.37
2264 2494 5.588958 ATTACTACCGAAGTTACTCCCAC 57.411 43.478 0.00 0.00 39.80 4.61
2265 2495 3.166560 ACTACCGAAGTTACTCCCACT 57.833 47.619 0.00 0.00 33.35 4.00
2266 2496 2.824341 ACTACCGAAGTTACTCCCACTG 59.176 50.000 0.00 0.00 33.35 3.66
2267 2497 1.713297 ACCGAAGTTACTCCCACTGT 58.287 50.000 0.00 0.00 0.00 3.55
2268 2498 1.343465 ACCGAAGTTACTCCCACTGTG 59.657 52.381 0.00 0.00 0.00 3.66
2269 2499 1.337823 CCGAAGTTACTCCCACTGTGG 60.338 57.143 20.01 20.01 37.25 4.17
2270 2500 1.809684 GAAGTTACTCCCACTGTGGC 58.190 55.000 21.47 6.54 35.79 5.01
2271 2501 1.348036 GAAGTTACTCCCACTGTGGCT 59.652 52.381 21.47 8.83 35.79 4.75
2272 2502 2.320681 AGTTACTCCCACTGTGGCTA 57.679 50.000 21.47 10.31 35.79 3.93
2273 2503 2.180276 AGTTACTCCCACTGTGGCTAG 58.820 52.381 21.47 20.51 35.79 3.42
2274 2504 1.900486 GTTACTCCCACTGTGGCTAGT 59.100 52.381 26.22 26.22 35.79 2.57
2275 2505 1.848652 TACTCCCACTGTGGCTAGTC 58.151 55.000 26.56 0.00 35.79 2.59
2276 2506 0.115349 ACTCCCACTGTGGCTAGTCT 59.885 55.000 21.47 3.44 35.79 3.24
2285 2515 3.446161 ACTGTGGCTAGTCTTATAACGCA 59.554 43.478 0.00 0.00 0.00 5.24
2286 2516 4.099573 ACTGTGGCTAGTCTTATAACGCAT 59.900 41.667 0.00 0.00 0.00 4.73
2349 2579 1.354101 TTTTGCCGGGGAAGAGTAGA 58.646 50.000 2.18 0.00 0.00 2.59
2351 2581 0.611714 TTGCCGGGGAAGAGTAGAAC 59.388 55.000 2.18 0.00 0.00 3.01
2353 2583 1.262640 GCCGGGGAAGAGTAGAACCA 61.263 60.000 2.18 0.00 0.00 3.67
2355 2585 1.838077 CCGGGGAAGAGTAGAACCATT 59.162 52.381 0.00 0.00 0.00 3.16
2426 2656 4.197498 GCACCATGCGTCCATGCC 62.197 66.667 0.00 0.00 45.97 4.40
2429 2659 1.825191 ACCATGCGTCCATGCCATC 60.825 57.895 0.00 0.00 45.97 3.51
2449 2679 5.475909 CCATCATGGAGCATAATTAAGCAGT 59.524 40.000 14.58 0.00 40.96 4.40
2455 2685 6.467677 TGGAGCATAATTAAGCAGTATCCTC 58.532 40.000 14.58 2.12 0.00 3.71
2462 2696 9.276590 CATAATTAAGCAGTATCCTCAACATCA 57.723 33.333 0.00 0.00 0.00 3.07
2483 2717 8.912988 ACATCACTTTTCTTCCTTTTCAACATA 58.087 29.630 0.00 0.00 0.00 2.29
2514 2774 0.315251 GCCTTTTCTGCCCAAGTGTC 59.685 55.000 0.00 0.00 0.00 3.67
2549 2809 4.694037 GCTATCCGGTTAGGCGAATAATTT 59.306 41.667 18.95 0.00 40.77 1.82
2624 2884 1.327460 CCGTCCAATTAGCATGTCACG 59.673 52.381 0.00 0.00 0.00 4.35
2627 2887 3.242091 CGTCCAATTAGCATGTCACGAAG 60.242 47.826 0.00 0.00 0.00 3.79
2661 2924 2.331194 CCATAACCTCGTCGTTTTCGT 58.669 47.619 0.00 0.00 44.46 3.85
2704 2967 3.621394 GGCTTCTCGTCGCATCGC 61.621 66.667 0.00 0.00 0.00 4.58
2705 2968 2.880879 GCTTCTCGTCGCATCGCA 60.881 61.111 0.00 0.00 0.00 5.10
2706 2969 2.233654 GCTTCTCGTCGCATCGCAT 61.234 57.895 0.00 0.00 0.00 4.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.382275 CCCCAAATCTTCTTTTTGTAATATTGG 57.618 33.333 0.00 0.00 33.23 3.16
7 8 8.757877 CCATATTCCCCAAATCTTCTTTTTGTA 58.242 33.333 0.00 0.00 33.23 2.41
8 9 7.623630 CCATATTCCCCAAATCTTCTTTTTGT 58.376 34.615 0.00 0.00 33.23 2.83
9 10 6.539826 GCCATATTCCCCAAATCTTCTTTTTG 59.460 38.462 0.00 0.00 34.55 2.44
10 11 6.352996 GGCCATATTCCCCAAATCTTCTTTTT 60.353 38.462 0.00 0.00 0.00 1.94
11 12 5.130975 GGCCATATTCCCCAAATCTTCTTTT 59.869 40.000 0.00 0.00 0.00 2.27
12 13 4.655649 GGCCATATTCCCCAAATCTTCTTT 59.344 41.667 0.00 0.00 0.00 2.52
13 14 4.226384 GGCCATATTCCCCAAATCTTCTT 58.774 43.478 0.00 0.00 0.00 2.52
14 15 3.207321 TGGCCATATTCCCCAAATCTTCT 59.793 43.478 0.00 0.00 0.00 2.85
15 16 3.321968 GTGGCCATATTCCCCAAATCTTC 59.678 47.826 9.72 0.00 0.00 2.87
16 17 3.051880 AGTGGCCATATTCCCCAAATCTT 60.052 43.478 9.72 0.00 0.00 2.40
17 18 2.519691 AGTGGCCATATTCCCCAAATCT 59.480 45.455 9.72 0.00 0.00 2.40
18 19 2.962859 AGTGGCCATATTCCCCAAATC 58.037 47.619 9.72 0.00 0.00 2.17
19 20 3.040477 CAAGTGGCCATATTCCCCAAAT 58.960 45.455 9.72 0.00 0.00 2.32
20 21 2.043664 TCAAGTGGCCATATTCCCCAAA 59.956 45.455 9.72 0.00 0.00 3.28
21 22 1.643286 TCAAGTGGCCATATTCCCCAA 59.357 47.619 9.72 0.00 0.00 4.12
22 23 1.215173 CTCAAGTGGCCATATTCCCCA 59.785 52.381 9.72 0.00 0.00 4.96
23 24 1.986882 CTCAAGTGGCCATATTCCCC 58.013 55.000 9.72 0.00 0.00 4.81
24 25 1.133668 AGCTCAAGTGGCCATATTCCC 60.134 52.381 9.72 0.00 0.00 3.97
29 30 1.748244 GCATCAGCTCAAGTGGCCATA 60.748 52.381 9.72 0.00 37.91 2.74
59 60 4.699637 CGCATACATACACCTTTTCCCTA 58.300 43.478 0.00 0.00 0.00 3.53
60 61 3.541632 CGCATACATACACCTTTTCCCT 58.458 45.455 0.00 0.00 0.00 4.20
65 66 3.944650 TCATTGCGCATACATACACCTTT 59.055 39.130 12.75 0.00 0.00 3.11
68 69 2.611751 TGTCATTGCGCATACATACACC 59.388 45.455 12.75 0.00 0.00 4.16
170 172 2.642700 GCACGGACGGCAATGTTT 59.357 55.556 0.00 0.00 0.00 2.83
262 277 1.423584 TGAAGGGAGTGCTCAAGACA 58.576 50.000 1.41 0.00 0.00 3.41
311 328 1.242076 CAGCAAGGAACTGGGAGTTG 58.758 55.000 0.00 0.00 38.80 3.16
316 340 1.528129 GAGAACAGCAAGGAACTGGG 58.472 55.000 0.00 0.00 40.86 4.45
320 344 1.882623 CCAAGGAGAACAGCAAGGAAC 59.117 52.381 0.00 0.00 0.00 3.62
325 349 3.480470 CTCTTTCCAAGGAGAACAGCAA 58.520 45.455 0.00 0.00 0.00 3.91
352 376 3.212685 CTGAAGCATCTTTGGATCCCTC 58.787 50.000 9.90 0.00 0.00 4.30
1075 1099 2.094675 CTCGATTTCTGGCAATGGGTT 58.905 47.619 0.00 0.00 0.00 4.11
1852 2082 0.807496 GTGCCTGTTCCTGAAGCATC 59.193 55.000 0.00 0.00 35.62 3.91
1853 2083 0.403271 AGTGCCTGTTCCTGAAGCAT 59.597 50.000 0.00 0.00 35.62 3.79
1854 2084 1.055849 TAGTGCCTGTTCCTGAAGCA 58.944 50.000 0.00 0.00 0.00 3.91
1855 2085 2.185004 TTAGTGCCTGTTCCTGAAGC 57.815 50.000 0.00 0.00 0.00 3.86
1856 2086 5.241506 TCAAAATTAGTGCCTGTTCCTGAAG 59.758 40.000 0.00 0.00 0.00 3.02
1857 2087 5.136828 TCAAAATTAGTGCCTGTTCCTGAA 58.863 37.500 0.00 0.00 0.00 3.02
1858 2088 4.724399 TCAAAATTAGTGCCTGTTCCTGA 58.276 39.130 0.00 0.00 0.00 3.86
1859 2089 5.404946 CATCAAAATTAGTGCCTGTTCCTG 58.595 41.667 0.00 0.00 0.00 3.86
1860 2090 4.082026 GCATCAAAATTAGTGCCTGTTCCT 60.082 41.667 0.00 0.00 0.00 3.36
1861 2091 4.176271 GCATCAAAATTAGTGCCTGTTCC 58.824 43.478 0.00 0.00 0.00 3.62
1862 2092 4.808558 TGCATCAAAATTAGTGCCTGTTC 58.191 39.130 0.00 0.00 36.79 3.18
1863 2093 4.813027 CTGCATCAAAATTAGTGCCTGTT 58.187 39.130 0.00 0.00 36.79 3.16
1864 2094 3.367703 GCTGCATCAAAATTAGTGCCTGT 60.368 43.478 0.00 0.00 36.79 4.00
1865 2095 3.184541 GCTGCATCAAAATTAGTGCCTG 58.815 45.455 0.00 0.00 36.79 4.85
1866 2096 2.167075 GGCTGCATCAAAATTAGTGCCT 59.833 45.455 0.50 0.00 36.79 4.75
1867 2097 2.094078 TGGCTGCATCAAAATTAGTGCC 60.094 45.455 0.50 0.00 36.79 5.01
1868 2098 3.184541 CTGGCTGCATCAAAATTAGTGC 58.815 45.455 0.50 0.00 38.05 4.40
1869 2099 3.119245 AGCTGGCTGCATCAAAATTAGTG 60.119 43.478 18.84 0.00 45.94 2.74
1870 2100 3.094572 AGCTGGCTGCATCAAAATTAGT 58.905 40.909 18.84 0.00 45.94 2.24
1871 2101 3.795623 AGCTGGCTGCATCAAAATTAG 57.204 42.857 18.84 0.00 45.94 1.73
1872 2102 5.506151 CGATAAGCTGGCTGCATCAAAATTA 60.506 40.000 18.84 6.77 45.94 1.40
1873 2103 4.690122 GATAAGCTGGCTGCATCAAAATT 58.310 39.130 18.84 4.73 45.94 1.82
1874 2104 3.243301 CGATAAGCTGGCTGCATCAAAAT 60.243 43.478 18.84 0.00 45.94 1.82
1875 2105 2.097954 CGATAAGCTGGCTGCATCAAAA 59.902 45.455 18.84 0.00 45.94 2.44
1876 2106 1.672363 CGATAAGCTGGCTGCATCAAA 59.328 47.619 18.84 0.00 45.94 2.69
1877 2107 1.134431 TCGATAAGCTGGCTGCATCAA 60.134 47.619 18.84 0.00 45.94 2.57
1878 2108 0.465287 TCGATAAGCTGGCTGCATCA 59.535 50.000 18.84 3.24 45.94 3.07
1879 2109 1.146637 CTCGATAAGCTGGCTGCATC 58.853 55.000 18.84 12.00 45.94 3.91
1880 2110 0.467384 ACTCGATAAGCTGGCTGCAT 59.533 50.000 18.84 9.29 45.94 3.96
1881 2111 0.250234 AACTCGATAAGCTGGCTGCA 59.750 50.000 18.84 0.00 45.94 4.41
1882 2112 0.654683 CAACTCGATAAGCTGGCTGC 59.345 55.000 8.47 8.47 43.29 5.25
1883 2113 2.015736 ACAACTCGATAAGCTGGCTG 57.984 50.000 0.00 0.00 0.00 4.85
1884 2114 2.770164 AACAACTCGATAAGCTGGCT 57.230 45.000 0.00 0.00 0.00 4.75
1885 2115 4.033014 GTCTAAACAACTCGATAAGCTGGC 59.967 45.833 0.00 0.00 0.00 4.85
1886 2116 5.411781 AGTCTAAACAACTCGATAAGCTGG 58.588 41.667 0.00 0.00 0.00 4.85
1887 2117 7.251994 ACTAGTCTAAACAACTCGATAAGCTG 58.748 38.462 0.00 0.00 0.00 4.24
1888 2118 7.120873 TGACTAGTCTAAACAACTCGATAAGCT 59.879 37.037 23.01 0.00 0.00 3.74
1889 2119 7.218583 GTGACTAGTCTAAACAACTCGATAAGC 59.781 40.741 23.01 0.00 0.00 3.09
1890 2120 8.235226 TGTGACTAGTCTAAACAACTCGATAAG 58.765 37.037 23.01 0.00 0.00 1.73
1891 2121 8.102800 TGTGACTAGTCTAAACAACTCGATAA 57.897 34.615 23.01 0.00 0.00 1.75
1892 2122 7.677454 TGTGACTAGTCTAAACAACTCGATA 57.323 36.000 23.01 0.00 0.00 2.92
1893 2123 6.570672 TGTGACTAGTCTAAACAACTCGAT 57.429 37.500 23.01 0.00 0.00 3.59
1894 2124 6.381481 TTGTGACTAGTCTAAACAACTCGA 57.619 37.500 23.01 2.34 0.00 4.04
1895 2125 6.089551 CCATTGTGACTAGTCTAAACAACTCG 59.910 42.308 22.49 15.86 33.88 4.18
1896 2126 7.152645 TCCATTGTGACTAGTCTAAACAACTC 58.847 38.462 22.49 0.63 33.88 3.01
1897 2127 7.015292 TCTCCATTGTGACTAGTCTAAACAACT 59.985 37.037 22.49 12.96 33.88 3.16
1898 2128 7.152645 TCTCCATTGTGACTAGTCTAAACAAC 58.847 38.462 22.49 13.45 33.88 3.32
1899 2129 7.015292 ACTCTCCATTGTGACTAGTCTAAACAA 59.985 37.037 22.35 22.35 35.41 2.83
1900 2130 6.493802 ACTCTCCATTGTGACTAGTCTAAACA 59.506 38.462 23.01 16.03 0.00 2.83
1901 2131 6.926313 ACTCTCCATTGTGACTAGTCTAAAC 58.074 40.000 23.01 13.69 0.00 2.01
1902 2132 8.645814 TTACTCTCCATTGTGACTAGTCTAAA 57.354 34.615 23.01 16.70 0.00 1.85
1903 2133 7.339721 CCTTACTCTCCATTGTGACTAGTCTAA 59.660 40.741 23.01 17.50 0.00 2.10
1904 2134 6.829298 CCTTACTCTCCATTGTGACTAGTCTA 59.171 42.308 23.01 10.02 0.00 2.59
1905 2135 5.654650 CCTTACTCTCCATTGTGACTAGTCT 59.345 44.000 23.01 0.19 0.00 3.24
1906 2136 5.163499 CCCTTACTCTCCATTGTGACTAGTC 60.163 48.000 16.32 16.32 0.00 2.59
1907 2137 4.712337 CCCTTACTCTCCATTGTGACTAGT 59.288 45.833 0.00 0.00 0.00 2.57
1908 2138 4.100189 CCCCTTACTCTCCATTGTGACTAG 59.900 50.000 0.00 0.00 0.00 2.57
1909 2139 4.030913 CCCCTTACTCTCCATTGTGACTA 58.969 47.826 0.00 0.00 0.00 2.59
1910 2140 2.840651 CCCCTTACTCTCCATTGTGACT 59.159 50.000 0.00 0.00 0.00 3.41
1911 2141 2.572104 ACCCCTTACTCTCCATTGTGAC 59.428 50.000 0.00 0.00 0.00 3.67
1912 2142 2.571653 CACCCCTTACTCTCCATTGTGA 59.428 50.000 0.00 0.00 0.00 3.58
1913 2143 2.305927 ACACCCCTTACTCTCCATTGTG 59.694 50.000 0.00 0.00 0.00 3.33
1914 2144 2.632537 ACACCCCTTACTCTCCATTGT 58.367 47.619 0.00 0.00 0.00 2.71
1915 2145 3.721087 AACACCCCTTACTCTCCATTG 57.279 47.619 0.00 0.00 0.00 2.82
1916 2146 3.397955 ACAAACACCCCTTACTCTCCATT 59.602 43.478 0.00 0.00 0.00 3.16
1917 2147 2.986728 ACAAACACCCCTTACTCTCCAT 59.013 45.455 0.00 0.00 0.00 3.41
1918 2148 2.414612 ACAAACACCCCTTACTCTCCA 58.585 47.619 0.00 0.00 0.00 3.86
1919 2149 3.503800 AACAAACACCCCTTACTCTCC 57.496 47.619 0.00 0.00 0.00 3.71
1920 2150 4.457466 TGAAACAAACACCCCTTACTCTC 58.543 43.478 0.00 0.00 0.00 3.20
1921 2151 4.513406 TGAAACAAACACCCCTTACTCT 57.487 40.909 0.00 0.00 0.00 3.24
1922 2152 4.037565 CCTTGAAACAAACACCCCTTACTC 59.962 45.833 0.00 0.00 0.00 2.59
1923 2153 3.958147 CCTTGAAACAAACACCCCTTACT 59.042 43.478 0.00 0.00 0.00 2.24
1924 2154 3.069016 CCCTTGAAACAAACACCCCTTAC 59.931 47.826 0.00 0.00 0.00 2.34
1925 2155 3.052793 TCCCTTGAAACAAACACCCCTTA 60.053 43.478 0.00 0.00 0.00 2.69
1926 2156 2.115427 CCCTTGAAACAAACACCCCTT 58.885 47.619 0.00 0.00 0.00 3.95
1927 2157 1.289530 TCCCTTGAAACAAACACCCCT 59.710 47.619 0.00 0.00 0.00 4.79
1928 2158 1.411246 GTCCCTTGAAACAAACACCCC 59.589 52.381 0.00 0.00 0.00 4.95
1929 2159 2.384828 AGTCCCTTGAAACAAACACCC 58.615 47.619 0.00 0.00 0.00 4.61
1930 2160 4.465632 AAAGTCCCTTGAAACAAACACC 57.534 40.909 0.00 0.00 0.00 4.16
1931 2161 5.121611 CCAAAAAGTCCCTTGAAACAAACAC 59.878 40.000 0.00 0.00 0.00 3.32
1932 2162 5.221742 ACCAAAAAGTCCCTTGAAACAAACA 60.222 36.000 0.00 0.00 0.00 2.83
1933 2163 5.121611 CACCAAAAAGTCCCTTGAAACAAAC 59.878 40.000 0.00 0.00 0.00 2.93
1934 2164 5.221742 ACACCAAAAAGTCCCTTGAAACAAA 60.222 36.000 0.00 0.00 0.00 2.83
1935 2165 4.284746 ACACCAAAAAGTCCCTTGAAACAA 59.715 37.500 0.00 0.00 0.00 2.83
1936 2166 3.835395 ACACCAAAAAGTCCCTTGAAACA 59.165 39.130 0.00 0.00 0.00 2.83
1937 2167 4.465632 ACACCAAAAAGTCCCTTGAAAC 57.534 40.909 0.00 0.00 0.00 2.78
1938 2168 4.647399 CCTACACCAAAAAGTCCCTTGAAA 59.353 41.667 0.00 0.00 0.00 2.69
1939 2169 4.211920 CCTACACCAAAAAGTCCCTTGAA 58.788 43.478 0.00 0.00 0.00 2.69
1940 2170 3.435890 CCCTACACCAAAAAGTCCCTTGA 60.436 47.826 0.00 0.00 0.00 3.02
1941 2171 2.890945 CCCTACACCAAAAAGTCCCTTG 59.109 50.000 0.00 0.00 0.00 3.61
1942 2172 2.787035 TCCCTACACCAAAAAGTCCCTT 59.213 45.455 0.00 0.00 0.00 3.95
1943 2173 2.107726 GTCCCTACACCAAAAAGTCCCT 59.892 50.000 0.00 0.00 0.00 4.20
1944 2174 2.107726 AGTCCCTACACCAAAAAGTCCC 59.892 50.000 0.00 0.00 0.00 4.46
1945 2175 3.503800 AGTCCCTACACCAAAAAGTCC 57.496 47.619 0.00 0.00 0.00 3.85
1946 2176 5.479124 TCTAGTCCCTACACCAAAAAGTC 57.521 43.478 0.00 0.00 0.00 3.01
1947 2177 5.899631 TTCTAGTCCCTACACCAAAAAGT 57.100 39.130 0.00 0.00 0.00 2.66
1948 2178 7.284716 ACTTTTTCTAGTCCCTACACCAAAAAG 59.715 37.037 13.11 13.11 39.45 2.27
1949 2179 7.120716 ACTTTTTCTAGTCCCTACACCAAAAA 58.879 34.615 0.00 0.00 0.00 1.94
1950 2180 6.665695 ACTTTTTCTAGTCCCTACACCAAAA 58.334 36.000 0.00 0.00 0.00 2.44
1951 2181 6.256643 ACTTTTTCTAGTCCCTACACCAAA 57.743 37.500 0.00 0.00 0.00 3.28
1952 2182 5.899631 ACTTTTTCTAGTCCCTACACCAA 57.100 39.130 0.00 0.00 0.00 3.67
1953 2183 5.899631 AACTTTTTCTAGTCCCTACACCA 57.100 39.130 0.00 0.00 0.00 4.17
1954 2184 6.531923 AGAAACTTTTTCTAGTCCCTACACC 58.468 40.000 0.00 0.00 0.00 4.16
1955 2185 7.331440 GCTAGAAACTTTTTCTAGTCCCTACAC 59.669 40.741 25.73 11.18 45.96 2.90
1956 2186 7.015877 TGCTAGAAACTTTTTCTAGTCCCTACA 59.984 37.037 25.73 16.36 45.96 2.74
1957 2187 7.384477 TGCTAGAAACTTTTTCTAGTCCCTAC 58.616 38.462 25.73 14.71 45.96 3.18
1958 2188 7.549147 TGCTAGAAACTTTTTCTAGTCCCTA 57.451 36.000 25.73 12.30 45.96 3.53
1959 2189 6.435292 TGCTAGAAACTTTTTCTAGTCCCT 57.565 37.500 25.73 0.45 45.96 4.20
1960 2190 7.361127 GTTTGCTAGAAACTTTTTCTAGTCCC 58.639 38.462 25.73 15.69 45.96 4.46
1961 2191 7.012989 TGGTTTGCTAGAAACTTTTTCTAGTCC 59.987 37.037 25.73 22.26 45.96 3.85
1962 2192 7.927048 TGGTTTGCTAGAAACTTTTTCTAGTC 58.073 34.615 25.73 20.40 45.96 2.59
1963 2193 7.875327 TGGTTTGCTAGAAACTTTTTCTAGT 57.125 32.000 25.73 2.17 45.96 2.57
1964 2194 9.020813 GTTTGGTTTGCTAGAAACTTTTTCTAG 57.979 33.333 23.00 23.00 46.60 2.43
1965 2195 8.524487 TGTTTGGTTTGCTAGAAACTTTTTCTA 58.476 29.630 13.76 7.88 31.03 2.10
1966 2196 7.382898 TGTTTGGTTTGCTAGAAACTTTTTCT 58.617 30.769 13.76 6.43 31.03 2.52
1967 2197 7.201522 CCTGTTTGGTTTGCTAGAAACTTTTTC 60.202 37.037 13.76 0.00 31.03 2.29
1968 2198 6.593770 CCTGTTTGGTTTGCTAGAAACTTTTT 59.406 34.615 13.76 0.00 31.03 1.94
1969 2199 6.106003 CCTGTTTGGTTTGCTAGAAACTTTT 58.894 36.000 13.76 0.00 31.03 2.27
1970 2200 5.395214 CCCTGTTTGGTTTGCTAGAAACTTT 60.395 40.000 13.76 0.00 31.03 2.66
1971 2201 4.099419 CCCTGTTTGGTTTGCTAGAAACTT 59.901 41.667 13.76 0.00 31.03 2.66
1972 2202 3.636764 CCCTGTTTGGTTTGCTAGAAACT 59.363 43.478 13.76 0.00 31.03 2.66
1973 2203 3.383505 ACCCTGTTTGGTTTGCTAGAAAC 59.616 43.478 0.00 1.68 33.91 2.78
1974 2204 3.383185 CACCCTGTTTGGTTTGCTAGAAA 59.617 43.478 0.00 0.00 36.12 2.52
1975 2205 2.955660 CACCCTGTTTGGTTTGCTAGAA 59.044 45.455 0.00 0.00 36.12 2.10
1976 2206 2.582052 CACCCTGTTTGGTTTGCTAGA 58.418 47.619 0.00 0.00 36.12 2.43
1977 2207 1.613437 CCACCCTGTTTGGTTTGCTAG 59.387 52.381 0.00 0.00 36.12 3.42
1978 2208 1.698506 CCACCCTGTTTGGTTTGCTA 58.301 50.000 0.00 0.00 36.12 3.49
1979 2209 1.048160 CCCACCCTGTTTGGTTTGCT 61.048 55.000 0.00 0.00 36.12 3.91
1980 2210 1.045911 TCCCACCCTGTTTGGTTTGC 61.046 55.000 0.00 0.00 36.12 3.68
1981 2211 0.750249 GTCCCACCCTGTTTGGTTTG 59.250 55.000 0.00 0.00 36.12 2.93
1982 2212 0.634465 AGTCCCACCCTGTTTGGTTT 59.366 50.000 0.00 0.00 36.12 3.27
1983 2213 0.634465 AAGTCCCACCCTGTTTGGTT 59.366 50.000 0.00 0.00 36.12 3.67
1984 2214 0.634465 AAAGTCCCACCCTGTTTGGT 59.366 50.000 0.00 0.00 39.96 3.67
1985 2215 1.788229 AAAAGTCCCACCCTGTTTGG 58.212 50.000 0.00 0.00 0.00 3.28
1986 2216 2.158971 CCAAAAAGTCCCACCCTGTTTG 60.159 50.000 0.00 0.00 37.04 2.93
1987 2217 2.115427 CCAAAAAGTCCCACCCTGTTT 58.885 47.619 0.00 0.00 0.00 2.83
1988 2218 1.691163 CCCAAAAAGTCCCACCCTGTT 60.691 52.381 0.00 0.00 0.00 3.16
1989 2219 0.105709 CCCAAAAAGTCCCACCCTGT 60.106 55.000 0.00 0.00 0.00 4.00
1990 2220 0.831711 CCCCAAAAAGTCCCACCCTG 60.832 60.000 0.00 0.00 0.00 4.45
1991 2221 1.002242 TCCCCAAAAAGTCCCACCCT 61.002 55.000 0.00 0.00 0.00 4.34
1992 2222 0.830444 GTCCCCAAAAAGTCCCACCC 60.830 60.000 0.00 0.00 0.00 4.61
1993 2223 0.187606 AGTCCCCAAAAAGTCCCACC 59.812 55.000 0.00 0.00 0.00 4.61
1994 2224 2.082140 AAGTCCCCAAAAAGTCCCAC 57.918 50.000 0.00 0.00 0.00 4.61
1995 2225 2.858787 AAAGTCCCCAAAAAGTCCCA 57.141 45.000 0.00 0.00 0.00 4.37
1996 2226 3.804036 CAAAAAGTCCCCAAAAAGTCCC 58.196 45.455 0.00 0.00 0.00 4.46
1997 2227 3.118408 AGCAAAAAGTCCCCAAAAAGTCC 60.118 43.478 0.00 0.00 0.00 3.85
1998 2228 4.137116 AGCAAAAAGTCCCCAAAAAGTC 57.863 40.909 0.00 0.00 0.00 3.01
1999 2229 5.685520 TTAGCAAAAAGTCCCCAAAAAGT 57.314 34.783 0.00 0.00 0.00 2.66
2000 2230 6.993786 TTTTAGCAAAAAGTCCCCAAAAAG 57.006 33.333 0.00 0.00 31.04 2.27
2001 2231 6.993786 CTTTTAGCAAAAAGTCCCCAAAAA 57.006 33.333 3.06 0.00 44.36 1.94
2012 2242 7.200455 GTGCTTCTAAGGACTTTTAGCAAAAA 58.800 34.615 7.07 0.00 43.15 1.94
2013 2243 6.238925 GGTGCTTCTAAGGACTTTTAGCAAAA 60.239 38.462 13.12 0.00 45.42 2.44
2014 2244 5.240844 GGTGCTTCTAAGGACTTTTAGCAAA 59.759 40.000 13.12 0.00 45.42 3.68
2015 2245 4.760204 GGTGCTTCTAAGGACTTTTAGCAA 59.240 41.667 13.12 1.75 45.42 3.91
2016 2246 4.041691 AGGTGCTTCTAAGGACTTTTAGCA 59.958 41.667 13.12 9.74 45.42 3.49
2017 2247 4.393371 CAGGTGCTTCTAAGGACTTTTAGC 59.607 45.833 13.12 0.00 45.42 3.09
2018 2248 4.393371 GCAGGTGCTTCTAAGGACTTTTAG 59.607 45.833 13.12 0.00 45.42 1.85
2019 2249 4.324267 GCAGGTGCTTCTAAGGACTTTTA 58.676 43.478 13.12 0.00 45.42 1.52
2020 2250 3.149981 GCAGGTGCTTCTAAGGACTTTT 58.850 45.455 13.12 0.00 45.42 2.27
2021 2251 2.784347 GCAGGTGCTTCTAAGGACTTT 58.216 47.619 13.12 1.33 45.42 2.66
2022 2252 2.481289 GCAGGTGCTTCTAAGGACTT 57.519 50.000 13.12 3.95 45.42 3.01
2034 2264 1.889545 AAAGACTCTCAAGCAGGTGC 58.110 50.000 0.00 0.00 42.49 5.01
2035 2265 3.879295 TGAAAAAGACTCTCAAGCAGGTG 59.121 43.478 0.00 0.00 0.00 4.00
2036 2266 4.156455 TGAAAAAGACTCTCAAGCAGGT 57.844 40.909 0.00 0.00 0.00 4.00
2037 2267 5.505173 TTTGAAAAAGACTCTCAAGCAGG 57.495 39.130 0.00 0.00 31.11 4.85
2038 2268 7.031975 ACTTTTTGAAAAAGACTCTCAAGCAG 58.968 34.615 30.55 6.52 31.11 4.24
2039 2269 6.924111 ACTTTTTGAAAAAGACTCTCAAGCA 58.076 32.000 30.55 0.00 31.11 3.91
2040 2270 6.473778 GGACTTTTTGAAAAAGACTCTCAAGC 59.526 38.462 30.55 10.90 31.11 4.01
2041 2271 6.975197 GGGACTTTTTGAAAAAGACTCTCAAG 59.025 38.462 30.55 7.82 31.11 3.02
2042 2272 6.435904 TGGGACTTTTTGAAAAAGACTCTCAA 59.564 34.615 30.55 11.11 0.00 3.02
2043 2273 5.949354 TGGGACTTTTTGAAAAAGACTCTCA 59.051 36.000 30.55 22.55 0.00 3.27
2044 2274 6.451064 TGGGACTTTTTGAAAAAGACTCTC 57.549 37.500 30.55 20.65 0.00 3.20
2045 2275 5.360999 CCTGGGACTTTTTGAAAAAGACTCT 59.639 40.000 30.55 12.96 0.00 3.24
2046 2276 5.451937 CCCTGGGACTTTTTGAAAAAGACTC 60.452 44.000 30.55 25.34 0.00 3.36
2047 2277 4.405680 CCCTGGGACTTTTTGAAAAAGACT 59.594 41.667 30.55 13.94 0.00 3.24
2048 2278 4.161565 ACCCTGGGACTTTTTGAAAAAGAC 59.838 41.667 30.55 24.86 0.00 3.01
2049 2279 4.358214 ACCCTGGGACTTTTTGAAAAAGA 58.642 39.130 30.55 12.07 0.00 2.52
2050 2280 4.405680 AGACCCTGGGACTTTTTGAAAAAG 59.594 41.667 24.36 24.36 0.00 2.27
2051 2281 4.358214 AGACCCTGGGACTTTTTGAAAAA 58.642 39.130 22.23 2.83 0.00 1.94
2052 2282 3.989056 AGACCCTGGGACTTTTTGAAAA 58.011 40.909 22.23 0.00 0.00 2.29
2053 2283 3.680777 AGACCCTGGGACTTTTTGAAA 57.319 42.857 22.23 0.00 0.00 2.69
2054 2284 3.977999 TCTAGACCCTGGGACTTTTTGAA 59.022 43.478 22.39 3.15 0.00 2.69
2055 2285 3.593942 TCTAGACCCTGGGACTTTTTGA 58.406 45.455 22.39 12.73 0.00 2.69
2056 2286 4.367039 TTCTAGACCCTGGGACTTTTTG 57.633 45.455 22.39 10.87 0.00 2.44
2057 2287 5.397553 TTTTCTAGACCCTGGGACTTTTT 57.602 39.130 22.39 1.53 0.00 1.94
2058 2288 5.103643 ACTTTTTCTAGACCCTGGGACTTTT 60.104 40.000 22.39 1.89 0.00 2.27
2059 2289 4.415846 ACTTTTTCTAGACCCTGGGACTTT 59.584 41.667 22.39 2.64 0.00 2.66
2060 2290 3.981375 ACTTTTTCTAGACCCTGGGACTT 59.019 43.478 22.39 8.17 0.00 3.01
2061 2291 3.583526 GACTTTTTCTAGACCCTGGGACT 59.416 47.826 22.23 21.57 0.00 3.85
2062 2292 3.307550 GGACTTTTTCTAGACCCTGGGAC 60.308 52.174 22.23 14.34 0.00 4.46
2063 2293 2.910977 GGACTTTTTCTAGACCCTGGGA 59.089 50.000 22.23 0.00 0.00 4.37
2064 2294 2.913617 AGGACTTTTTCTAGACCCTGGG 59.086 50.000 12.28 12.28 31.43 4.45
2065 2295 4.162509 CCTAGGACTTTTTCTAGACCCTGG 59.837 50.000 1.05 0.00 36.08 4.45
2066 2296 5.024118 TCCTAGGACTTTTTCTAGACCCTG 58.976 45.833 7.62 0.00 36.08 4.45
2067 2297 5.024785 GTCCTAGGACTTTTTCTAGACCCT 58.975 45.833 31.12 0.00 41.57 4.34
2068 2298 5.341872 GTCCTAGGACTTTTTCTAGACCC 57.658 47.826 31.12 2.66 41.57 4.46
2081 2311 6.157904 GTGTTTGTTTCTCTAGTCCTAGGAC 58.842 44.000 31.29 31.29 44.86 3.85
2082 2312 5.245526 GGTGTTTGTTTCTCTAGTCCTAGGA 59.754 44.000 7.62 7.62 34.06 2.94
2083 2313 5.011738 TGGTGTTTGTTTCTCTAGTCCTAGG 59.988 44.000 0.82 0.82 34.06 3.02
2084 2314 6.097915 TGGTGTTTGTTTCTCTAGTCCTAG 57.902 41.667 0.00 0.00 34.56 3.02
2085 2315 6.681729 ATGGTGTTTGTTTCTCTAGTCCTA 57.318 37.500 0.00 0.00 0.00 2.94
2086 2316 5.568620 ATGGTGTTTGTTTCTCTAGTCCT 57.431 39.130 0.00 0.00 0.00 3.85
2087 2317 6.635030 AAATGGTGTTTGTTTCTCTAGTCC 57.365 37.500 0.00 0.00 0.00 3.85
2088 2318 8.617809 TGTTAAATGGTGTTTGTTTCTCTAGTC 58.382 33.333 0.00 0.00 0.00 2.59
2089 2319 8.514330 TGTTAAATGGTGTTTGTTTCTCTAGT 57.486 30.769 0.00 0.00 0.00 2.57
2092 2322 8.908903 TGTATGTTAAATGGTGTTTGTTTCTCT 58.091 29.630 0.00 0.00 0.00 3.10
2093 2323 8.964150 GTGTATGTTAAATGGTGTTTGTTTCTC 58.036 33.333 0.00 0.00 0.00 2.87
2094 2324 8.691797 AGTGTATGTTAAATGGTGTTTGTTTCT 58.308 29.630 0.00 0.00 0.00 2.52
2095 2325 8.865590 AGTGTATGTTAAATGGTGTTTGTTTC 57.134 30.769 0.00 0.00 0.00 2.78
2096 2326 9.959749 CTAGTGTATGTTAAATGGTGTTTGTTT 57.040 29.630 0.00 0.00 0.00 2.83
2097 2327 9.127277 ACTAGTGTATGTTAAATGGTGTTTGTT 57.873 29.630 0.00 0.00 0.00 2.83
2098 2328 8.685838 ACTAGTGTATGTTAAATGGTGTTTGT 57.314 30.769 0.00 0.00 0.00 2.83
2101 2331 9.781633 TGTTACTAGTGTATGTTAAATGGTGTT 57.218 29.630 5.39 0.00 0.00 3.32
2102 2332 9.953565 ATGTTACTAGTGTATGTTAAATGGTGT 57.046 29.630 5.39 0.00 0.00 4.16
2118 2348 9.494271 CCAATGCAATATGAGTATGTTACTAGT 57.506 33.333 0.00 0.00 39.59 2.57
2119 2349 8.939929 CCCAATGCAATATGAGTATGTTACTAG 58.060 37.037 0.00 0.00 39.59 2.57
2120 2350 8.655901 TCCCAATGCAATATGAGTATGTTACTA 58.344 33.333 0.00 0.00 39.59 1.82
2121 2351 7.445402 GTCCCAATGCAATATGAGTATGTTACT 59.555 37.037 0.00 0.00 42.86 2.24
2122 2352 7.228507 TGTCCCAATGCAATATGAGTATGTTAC 59.771 37.037 0.00 0.00 0.00 2.50
2123 2353 7.286313 TGTCCCAATGCAATATGAGTATGTTA 58.714 34.615 0.00 0.00 0.00 2.41
2124 2354 6.128486 TGTCCCAATGCAATATGAGTATGTT 58.872 36.000 0.00 0.00 0.00 2.71
2125 2355 5.693961 TGTCCCAATGCAATATGAGTATGT 58.306 37.500 0.00 0.00 0.00 2.29
2126 2356 6.208007 ACATGTCCCAATGCAATATGAGTATG 59.792 38.462 0.00 0.00 0.00 2.39
2127 2357 6.208007 CACATGTCCCAATGCAATATGAGTAT 59.792 38.462 0.00 0.00 0.00 2.12
2128 2358 5.532032 CACATGTCCCAATGCAATATGAGTA 59.468 40.000 0.00 0.00 0.00 2.59
2129 2359 4.340097 CACATGTCCCAATGCAATATGAGT 59.660 41.667 0.00 0.00 0.00 3.41
2130 2360 4.581409 TCACATGTCCCAATGCAATATGAG 59.419 41.667 0.00 0.00 0.00 2.90
2131 2361 4.534797 TCACATGTCCCAATGCAATATGA 58.465 39.130 0.00 0.00 0.00 2.15
2132 2362 4.922471 TCACATGTCCCAATGCAATATG 57.078 40.909 0.00 0.00 0.00 1.78
2133 2363 4.897076 ACATCACATGTCCCAATGCAATAT 59.103 37.500 0.00 0.00 39.92 1.28
2134 2364 4.279982 ACATCACATGTCCCAATGCAATA 58.720 39.130 0.00 0.00 39.92 1.90
2135 2365 3.101437 ACATCACATGTCCCAATGCAAT 58.899 40.909 0.00 0.00 39.92 3.56
2136 2366 2.527497 ACATCACATGTCCCAATGCAA 58.473 42.857 0.00 0.00 39.92 4.08
2137 2367 2.219080 ACATCACATGTCCCAATGCA 57.781 45.000 0.00 0.00 39.92 3.96
2138 2368 3.443329 TGTAACATCACATGTCCCAATGC 59.557 43.478 0.00 0.00 44.07 3.56
2139 2369 4.701651 ACTGTAACATCACATGTCCCAATG 59.298 41.667 0.00 0.45 44.07 2.82
2140 2370 4.922206 ACTGTAACATCACATGTCCCAAT 58.078 39.130 0.00 0.00 44.07 3.16
2141 2371 4.365514 ACTGTAACATCACATGTCCCAA 57.634 40.909 0.00 0.00 44.07 4.12
2142 2372 5.012664 AGTTACTGTAACATCACATGTCCCA 59.987 40.000 27.12 0.00 44.07 4.37
2143 2373 5.488341 AGTTACTGTAACATCACATGTCCC 58.512 41.667 27.12 1.55 44.07 4.46
2144 2374 6.255887 GCTAGTTACTGTAACATCACATGTCC 59.744 42.308 27.12 1.73 44.07 4.02
2145 2375 7.036220 AGCTAGTTACTGTAACATCACATGTC 58.964 38.462 27.12 9.51 44.07 3.06
2147 2377 8.926715 TTAGCTAGTTACTGTAACATCACATG 57.073 34.615 27.12 12.57 41.07 3.21
2148 2378 8.750298 ACTTAGCTAGTTACTGTAACATCACAT 58.250 33.333 27.12 11.85 41.07 3.21
2149 2379 8.118976 ACTTAGCTAGTTACTGTAACATCACA 57.881 34.615 27.12 10.61 41.07 3.58
2150 2380 8.983307 AACTTAGCTAGTTACTGTAACATCAC 57.017 34.615 27.12 15.70 45.22 3.06
2183 2413 9.585099 GCAATGAGTTAATGAGGAGAGATATAG 57.415 37.037 0.00 0.00 0.00 1.31
2184 2414 8.535335 GGCAATGAGTTAATGAGGAGAGATATA 58.465 37.037 0.00 0.00 0.00 0.86
2185 2415 7.016957 TGGCAATGAGTTAATGAGGAGAGATAT 59.983 37.037 0.00 0.00 0.00 1.63
2186 2416 6.327365 TGGCAATGAGTTAATGAGGAGAGATA 59.673 38.462 0.00 0.00 0.00 1.98
2187 2417 5.131642 TGGCAATGAGTTAATGAGGAGAGAT 59.868 40.000 0.00 0.00 0.00 2.75
2188 2418 4.471025 TGGCAATGAGTTAATGAGGAGAGA 59.529 41.667 0.00 0.00 0.00 3.10
2189 2419 4.574013 GTGGCAATGAGTTAATGAGGAGAG 59.426 45.833 0.00 0.00 0.00 3.20
2190 2420 4.019411 TGTGGCAATGAGTTAATGAGGAGA 60.019 41.667 0.00 0.00 0.00 3.71
2191 2421 4.264253 TGTGGCAATGAGTTAATGAGGAG 58.736 43.478 0.00 0.00 0.00 3.69
2192 2422 4.299586 TGTGGCAATGAGTTAATGAGGA 57.700 40.909 0.00 0.00 0.00 3.71
2193 2423 6.698008 TTATGTGGCAATGAGTTAATGAGG 57.302 37.500 0.00 0.00 0.00 3.86
2194 2424 6.183360 TGCTTATGTGGCAATGAGTTAATGAG 60.183 38.462 0.00 0.00 36.71 2.90
2195 2425 5.651576 TGCTTATGTGGCAATGAGTTAATGA 59.348 36.000 0.00 0.00 36.71 2.57
2196 2426 5.893687 TGCTTATGTGGCAATGAGTTAATG 58.106 37.500 0.00 0.00 36.71 1.90
2197 2427 6.528537 TTGCTTATGTGGCAATGAGTTAAT 57.471 33.333 0.00 0.00 43.50 1.40
2198 2428 5.973899 TTGCTTATGTGGCAATGAGTTAA 57.026 34.783 0.00 0.00 43.50 2.01
2199 2429 5.973899 TTTGCTTATGTGGCAATGAGTTA 57.026 34.783 2.01 0.00 46.81 2.24
2200 2430 4.870123 TTTGCTTATGTGGCAATGAGTT 57.130 36.364 2.01 0.00 46.81 3.01
2201 2431 5.410355 AATTTGCTTATGTGGCAATGAGT 57.590 34.783 2.01 0.00 46.81 3.41
2202 2432 6.102006 CAAATTTGCTTATGTGGCAATGAG 57.898 37.500 5.01 0.00 46.81 2.90
2217 2447 3.311966 GAGTCCAACTCAGCAAATTTGC 58.688 45.455 31.36 31.36 44.45 3.68
2218 2448 3.250762 TCGAGTCCAACTCAGCAAATTTG 59.749 43.478 14.03 14.03 45.30 2.32
2219 2449 3.476552 TCGAGTCCAACTCAGCAAATTT 58.523 40.909 7.78 0.00 45.30 1.82
2220 2450 3.126001 TCGAGTCCAACTCAGCAAATT 57.874 42.857 7.78 0.00 45.30 1.82
2221 2451 2.839486 TCGAGTCCAACTCAGCAAAT 57.161 45.000 7.78 0.00 45.30 2.32
2222 2452 2.839486 ATCGAGTCCAACTCAGCAAA 57.161 45.000 7.78 0.00 45.30 3.68
2223 2453 4.471904 AATATCGAGTCCAACTCAGCAA 57.528 40.909 7.78 0.00 45.30 3.91
2224 2454 4.645136 AGTAATATCGAGTCCAACTCAGCA 59.355 41.667 7.78 0.00 45.30 4.41
2225 2455 5.189659 AGTAATATCGAGTCCAACTCAGC 57.810 43.478 7.78 0.00 45.30 4.26
2226 2456 6.566187 CGGTAGTAATATCGAGTCCAACTCAG 60.566 46.154 0.00 1.37 45.30 3.35
2227 2457 5.237996 CGGTAGTAATATCGAGTCCAACTCA 59.762 44.000 0.00 0.00 45.30 3.41
2228 2458 5.468072 TCGGTAGTAATATCGAGTCCAACTC 59.532 44.000 0.63 0.00 41.71 3.01
2229 2459 5.371526 TCGGTAGTAATATCGAGTCCAACT 58.628 41.667 0.63 0.00 0.00 3.16
2230 2460 5.679734 TCGGTAGTAATATCGAGTCCAAC 57.320 43.478 0.63 0.00 0.00 3.77
2231 2461 5.824624 ACTTCGGTAGTAATATCGAGTCCAA 59.175 40.000 5.64 0.00 34.56 3.53
2232 2462 5.371526 ACTTCGGTAGTAATATCGAGTCCA 58.628 41.667 5.64 0.00 34.56 4.02
2233 2463 5.938438 ACTTCGGTAGTAATATCGAGTCC 57.062 43.478 5.64 0.00 34.56 3.85
2234 2464 8.082334 AGTAACTTCGGTAGTAATATCGAGTC 57.918 38.462 5.64 0.00 35.54 3.36
2235 2465 7.172361 GGAGTAACTTCGGTAGTAATATCGAGT 59.828 40.741 5.64 4.28 35.54 4.18
2236 2466 7.360776 GGGAGTAACTTCGGTAGTAATATCGAG 60.361 44.444 5.64 3.70 35.54 4.04
2237 2467 6.428159 GGGAGTAACTTCGGTAGTAATATCGA 59.572 42.308 0.63 0.63 35.54 3.59
2238 2468 6.205464 TGGGAGTAACTTCGGTAGTAATATCG 59.795 42.308 0.00 0.00 35.54 2.92
2239 2469 7.230309 AGTGGGAGTAACTTCGGTAGTAATATC 59.770 40.741 0.00 0.00 35.54 1.63
2240 2470 7.014038 CAGTGGGAGTAACTTCGGTAGTAATAT 59.986 40.741 0.00 0.00 35.54 1.28
2241 2471 6.319658 CAGTGGGAGTAACTTCGGTAGTAATA 59.680 42.308 0.00 0.00 35.54 0.98
2242 2472 5.126707 CAGTGGGAGTAACTTCGGTAGTAAT 59.873 44.000 0.00 0.00 35.54 1.89
2243 2473 4.460382 CAGTGGGAGTAACTTCGGTAGTAA 59.540 45.833 0.00 0.00 35.54 2.24
2244 2474 4.012374 CAGTGGGAGTAACTTCGGTAGTA 58.988 47.826 0.00 0.00 35.54 1.82
2245 2475 2.824341 CAGTGGGAGTAACTTCGGTAGT 59.176 50.000 0.00 0.00 39.32 2.73
2246 2476 2.824341 ACAGTGGGAGTAACTTCGGTAG 59.176 50.000 0.00 0.00 0.00 3.18
2247 2477 2.559668 CACAGTGGGAGTAACTTCGGTA 59.440 50.000 0.00 0.00 0.00 4.02
2248 2478 1.343465 CACAGTGGGAGTAACTTCGGT 59.657 52.381 0.00 0.00 0.00 4.69
2249 2479 1.337823 CCACAGTGGGAGTAACTTCGG 60.338 57.143 12.40 0.00 32.67 4.30
2250 2480 1.939838 GCCACAGTGGGAGTAACTTCG 60.940 57.143 21.77 0.00 38.19 3.79
2251 2481 1.348036 AGCCACAGTGGGAGTAACTTC 59.652 52.381 21.77 0.78 38.19 3.01
2252 2482 1.435256 AGCCACAGTGGGAGTAACTT 58.565 50.000 21.77 0.00 38.19 2.66
2253 2483 2.180276 CTAGCCACAGTGGGAGTAACT 58.820 52.381 21.77 10.69 38.19 2.24
2254 2484 1.900486 ACTAGCCACAGTGGGAGTAAC 59.100 52.381 21.77 3.06 38.19 2.50
2255 2485 2.176889 GACTAGCCACAGTGGGAGTAA 58.823 52.381 21.77 0.00 38.19 2.24
2256 2486 1.358103 AGACTAGCCACAGTGGGAGTA 59.642 52.381 21.77 0.00 38.19 2.59
2257 2487 0.115349 AGACTAGCCACAGTGGGAGT 59.885 55.000 21.77 2.87 38.19 3.85
2258 2488 1.270907 AAGACTAGCCACAGTGGGAG 58.729 55.000 21.77 0.00 38.19 4.30
2259 2489 2.615986 TAAGACTAGCCACAGTGGGA 57.384 50.000 21.77 0.00 38.19 4.37
2260 2490 4.694339 GTTATAAGACTAGCCACAGTGGG 58.306 47.826 21.77 7.25 38.19 4.61
2261 2491 4.360563 CGTTATAAGACTAGCCACAGTGG 58.639 47.826 16.16 16.16 41.55 4.00
2262 2492 3.797256 GCGTTATAAGACTAGCCACAGTG 59.203 47.826 0.00 0.00 0.00 3.66
2263 2493 3.446161 TGCGTTATAAGACTAGCCACAGT 59.554 43.478 0.00 0.00 0.00 3.55
2264 2494 4.041740 TGCGTTATAAGACTAGCCACAG 57.958 45.455 0.00 0.00 0.00 3.66
2265 2495 4.665833 ATGCGTTATAAGACTAGCCACA 57.334 40.909 0.00 0.00 0.00 4.17
2266 2496 6.700520 AGTTTATGCGTTATAAGACTAGCCAC 59.299 38.462 0.00 0.00 33.03 5.01
2267 2497 6.812998 AGTTTATGCGTTATAAGACTAGCCA 58.187 36.000 0.00 0.00 33.03 4.75
2268 2498 7.437267 TGAAGTTTATGCGTTATAAGACTAGCC 59.563 37.037 0.00 0.00 33.03 3.93
2269 2499 8.267367 GTGAAGTTTATGCGTTATAAGACTAGC 58.733 37.037 0.00 0.00 33.03 3.42
2270 2500 9.297586 TGTGAAGTTTATGCGTTATAAGACTAG 57.702 33.333 0.00 0.00 33.03 2.57
2271 2501 9.811995 ATGTGAAGTTTATGCGTTATAAGACTA 57.188 29.630 0.00 0.00 33.03 2.59
2272 2502 8.604035 CATGTGAAGTTTATGCGTTATAAGACT 58.396 33.333 0.00 0.00 33.03 3.24
2273 2503 8.600625 TCATGTGAAGTTTATGCGTTATAAGAC 58.399 33.333 0.00 0.00 33.03 3.01
2274 2504 8.710835 TCATGTGAAGTTTATGCGTTATAAGA 57.289 30.769 0.00 0.00 33.03 2.10
2275 2505 9.767684 TTTCATGTGAAGTTTATGCGTTATAAG 57.232 29.630 0.00 0.00 35.21 1.73
2329 2559 1.700739 TCTACTCTTCCCCGGCAAAAA 59.299 47.619 0.00 0.00 0.00 1.94
2336 2566 3.270877 CAAATGGTTCTACTCTTCCCCG 58.729 50.000 0.00 0.00 0.00 5.73
2342 2572 5.471456 CAGAGCAAACAAATGGTTCTACTCT 59.529 40.000 3.33 3.33 40.59 3.24
2344 2574 5.239525 GTCAGAGCAAACAAATGGTTCTACT 59.760 40.000 0.00 0.00 39.29 2.57
2345 2575 5.239525 AGTCAGAGCAAACAAATGGTTCTAC 59.760 40.000 0.00 0.00 39.29 2.59
2346 2576 5.376625 AGTCAGAGCAAACAAATGGTTCTA 58.623 37.500 0.00 0.00 39.29 2.10
2347 2577 4.210331 AGTCAGAGCAAACAAATGGTTCT 58.790 39.130 0.00 0.00 39.29 3.01
2349 2579 5.343307 AAAGTCAGAGCAAACAAATGGTT 57.657 34.783 0.00 0.00 42.98 3.67
2351 2581 4.746611 GGAAAAGTCAGAGCAAACAAATGG 59.253 41.667 0.00 0.00 0.00 3.16
2353 2583 5.859205 AGGAAAAGTCAGAGCAAACAAAT 57.141 34.783 0.00 0.00 0.00 2.32
2355 2585 6.767524 TTAAGGAAAAGTCAGAGCAAACAA 57.232 33.333 0.00 0.00 0.00 2.83
2386 2616 0.587768 CACGCTGAGAACAACATGCA 59.412 50.000 0.00 0.00 0.00 3.96
2422 2652 5.105473 GCTTAATTATGCTCCATGATGGCAT 60.105 40.000 6.59 18.53 46.49 4.40
2423 2653 4.219070 GCTTAATTATGCTCCATGATGGCA 59.781 41.667 6.59 2.38 37.47 4.92
2424 2654 4.219070 TGCTTAATTATGCTCCATGATGGC 59.781 41.667 20.32 0.00 37.47 4.40
2425 2655 5.475909 ACTGCTTAATTATGCTCCATGATGG 59.524 40.000 20.32 4.74 39.43 3.51
2426 2656 6.570672 ACTGCTTAATTATGCTCCATGATG 57.429 37.500 20.32 0.00 0.00 3.07
2429 2659 7.081526 GGATACTGCTTAATTATGCTCCATG 57.918 40.000 20.32 10.26 0.00 3.66
2449 2679 7.020827 AGGAAGAAAAGTGATGTTGAGGATA 57.979 36.000 0.00 0.00 0.00 2.59
2455 2685 7.545265 TGTTGAAAAGGAAGAAAAGTGATGTTG 59.455 33.333 0.00 0.00 0.00 3.33
2483 2717 4.142160 GGCAGAAAAGGCGAGGATAAAAAT 60.142 41.667 0.00 0.00 0.00 1.82
2514 2774 1.465387 CCGGATAGCACTAGACGCTAG 59.535 57.143 18.77 10.97 44.74 3.42
2584 2844 1.530323 GTTTGGCCACCTGTTACGAT 58.470 50.000 3.88 0.00 0.00 3.73
2661 2924 3.123804 GTCTCAAGTCGAAAACAGCTCA 58.876 45.455 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.