Multiple sequence alignment - TraesCS2B01G186500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G186500 | chr2B | 100.000 | 6389 | 0 | 0 | 1 | 6389 | 161414376 | 161407988 | 0.000000e+00 | 11799.0 |
1 | TraesCS2B01G186500 | chr2B | 98.333 | 60 | 0 | 1 | 369 | 427 | 398971966 | 398972025 | 3.150000e-18 | 104.0 |
2 | TraesCS2B01G186500 | chr2D | 92.808 | 2322 | 106 | 27 | 832 | 3110 | 111328065 | 111325762 | 0.000000e+00 | 3306.0 |
3 | TraesCS2B01G186500 | chr2D | 92.547 | 1865 | 87 | 23 | 3607 | 5429 | 111325327 | 111323473 | 0.000000e+00 | 2627.0 |
4 | TraesCS2B01G186500 | chr2D | 87.580 | 942 | 67 | 31 | 5463 | 6380 | 111323472 | 111322557 | 0.000000e+00 | 1046.0 |
5 | TraesCS2B01G186500 | chr2D | 90.819 | 403 | 25 | 4 | 3112 | 3504 | 111325724 | 111325324 | 4.390000e-146 | 529.0 |
6 | TraesCS2B01G186500 | chr2D | 91.033 | 368 | 15 | 6 | 3 | 360 | 111331434 | 111331075 | 1.250000e-131 | 481.0 |
7 | TraesCS2B01G186500 | chr2A | 93.555 | 2110 | 90 | 22 | 858 | 2937 | 111417729 | 111415636 | 0.000000e+00 | 3101.0 |
8 | TraesCS2B01G186500 | chr2A | 90.513 | 1813 | 96 | 35 | 3607 | 5366 | 111415059 | 111413270 | 0.000000e+00 | 2326.0 |
9 | TraesCS2B01G186500 | chr2A | 91.318 | 933 | 68 | 8 | 5464 | 6389 | 111413236 | 111412310 | 0.000000e+00 | 1262.0 |
10 | TraesCS2B01G186500 | chr2A | 89.901 | 406 | 26 | 5 | 3112 | 3504 | 111415459 | 111415056 | 5.710000e-140 | 508.0 |
11 | TraesCS2B01G186500 | chr2A | 91.436 | 362 | 20 | 6 | 1 | 360 | 111420871 | 111420519 | 2.680000e-133 | 486.0 |
12 | TraesCS2B01G186500 | chr2A | 80.140 | 428 | 49 | 19 | 451 | 870 | 111418172 | 111417773 | 2.910000e-73 | 287.0 |
13 | TraesCS2B01G186500 | chr2A | 93.478 | 138 | 7 | 2 | 2975 | 3110 | 111415634 | 111415497 | 3.020000e-48 | 204.0 |
14 | TraesCS2B01G186500 | chr2A | 92.661 | 109 | 8 | 0 | 2051 | 2159 | 205917705 | 205917597 | 2.380000e-34 | 158.0 |
15 | TraesCS2B01G186500 | chr2A | 86.719 | 128 | 14 | 3 | 3497 | 3624 | 301437219 | 301437343 | 8.640000e-29 | 139.0 |
16 | TraesCS2B01G186500 | chr2A | 95.312 | 64 | 1 | 2 | 366 | 427 | 524753102 | 524753039 | 4.080000e-17 | 100.0 |
17 | TraesCS2B01G186500 | chr7B | 94.340 | 106 | 6 | 0 | 2051 | 2156 | 357651589 | 357651484 | 5.130000e-36 | 163.0 |
18 | TraesCS2B01G186500 | chr7B | 91.667 | 108 | 9 | 0 | 3503 | 3610 | 570465364 | 570465257 | 3.990000e-32 | 150.0 |
19 | TraesCS2B01G186500 | chr3D | 92.857 | 112 | 7 | 1 | 3502 | 3613 | 551702796 | 551702906 | 1.840000e-35 | 161.0 |
20 | TraesCS2B01G186500 | chr5D | 92.727 | 110 | 8 | 0 | 2051 | 2160 | 371860715 | 371860606 | 6.630000e-35 | 159.0 |
21 | TraesCS2B01G186500 | chr4A | 92.105 | 114 | 8 | 1 | 3501 | 3614 | 74167978 | 74168090 | 6.630000e-35 | 159.0 |
22 | TraesCS2B01G186500 | chr4A | 86.364 | 132 | 15 | 3 | 3493 | 3624 | 557549909 | 557549781 | 2.400000e-29 | 141.0 |
23 | TraesCS2B01G186500 | chr4A | 95.312 | 64 | 1 | 2 | 366 | 427 | 92300340 | 92300403 | 4.080000e-17 | 100.0 |
24 | TraesCS2B01G186500 | chr4A | 95.312 | 64 | 1 | 2 | 366 | 427 | 99889834 | 99889771 | 4.080000e-17 | 100.0 |
25 | TraesCS2B01G186500 | chr4D | 93.396 | 106 | 7 | 0 | 2051 | 2156 | 259497260 | 259497365 | 2.380000e-34 | 158.0 |
26 | TraesCS2B01G186500 | chr6B | 91.892 | 111 | 9 | 0 | 3505 | 3615 | 617173714 | 617173824 | 8.580000e-34 | 156.0 |
27 | TraesCS2B01G186500 | chr6B | 89.831 | 118 | 12 | 0 | 2042 | 2159 | 507471541 | 507471658 | 1.110000e-32 | 152.0 |
28 | TraesCS2B01G186500 | chr4B | 89.600 | 125 | 9 | 3 | 2038 | 2159 | 479155496 | 479155619 | 8.580000e-34 | 156.0 |
29 | TraesCS2B01G186500 | chr4B | 95.312 | 64 | 1 | 2 | 369 | 431 | 102209703 | 102209765 | 4.080000e-17 | 100.0 |
30 | TraesCS2B01G186500 | chr6A | 91.743 | 109 | 9 | 0 | 2051 | 2159 | 454678074 | 454677966 | 1.110000e-32 | 152.0 |
31 | TraesCS2B01G186500 | chr6A | 95.312 | 64 | 1 | 2 | 366 | 427 | 424317109 | 424317172 | 4.080000e-17 | 100.0 |
32 | TraesCS2B01G186500 | chr3B | 88.281 | 128 | 13 | 2 | 3492 | 3618 | 783531240 | 783531366 | 1.110000e-32 | 152.0 |
33 | TraesCS2B01G186500 | chr1A | 90.351 | 114 | 9 | 2 | 3497 | 3610 | 523409111 | 523409000 | 1.440000e-31 | 148.0 |
34 | TraesCS2B01G186500 | chr1A | 93.750 | 64 | 2 | 2 | 366 | 427 | 531183160 | 531183097 | 1.900000e-15 | 95.3 |
35 | TraesCS2B01G186500 | chr5B | 88.983 | 118 | 12 | 1 | 3500 | 3616 | 603815869 | 603815752 | 1.860000e-30 | 145.0 |
36 | TraesCS2B01G186500 | chr7A | 89.333 | 75 | 6 | 2 | 373 | 446 | 116123092 | 116123165 | 6.820000e-15 | 93.5 |
37 | TraesCS2B01G186500 | chr3A | 86.047 | 86 | 7 | 5 | 343 | 427 | 571806141 | 571806060 | 3.170000e-13 | 87.9 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G186500 | chr2B | 161407988 | 161414376 | 6388 | True | 11799.000000 | 11799 | 100.000000 | 1 | 6389 | 1 | chr2B.!!$R1 | 6388 |
1 | TraesCS2B01G186500 | chr2D | 111322557 | 111331434 | 8877 | True | 1597.800000 | 3306 | 90.957400 | 3 | 6380 | 5 | chr2D.!!$R1 | 6377 |
2 | TraesCS2B01G186500 | chr2A | 111412310 | 111420871 | 8561 | True | 1167.714286 | 3101 | 90.048714 | 1 | 6389 | 7 | chr2A.!!$R3 | 6388 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
688 | 3381 | 0.686769 | CCGGTGTAGGCTAGGGTTCT | 60.687 | 60.000 | 0.0 | 0.0 | 0.00 | 3.01 | F |
1363 | 4262 | 0.041663 | CGCGTCGGAATTTTGTGTGT | 60.042 | 50.000 | 0.0 | 0.0 | 0.00 | 3.72 | F |
2413 | 5326 | 1.137513 | CAACAACCTCCGAACGTCTC | 58.862 | 55.000 | 0.0 | 0.0 | 0.00 | 3.36 | F |
3389 | 6355 | 1.076513 | AGCCGGTTTTGGGGTAAGATT | 59.923 | 47.619 | 1.9 | 0.0 | 32.50 | 2.40 | F |
3521 | 6490 | 0.043637 | TACTCCCTCCACCCCGAATT | 59.956 | 55.000 | 0.0 | 0.0 | 0.00 | 2.17 | F |
3524 | 6493 | 0.043637 | TCCCTCCACCCCGAATTACT | 59.956 | 55.000 | 0.0 | 0.0 | 0.00 | 2.24 | F |
3531 | 6500 | 0.322322 | ACCCCGAATTACTTGTCGCA | 59.678 | 50.000 | 0.0 | 0.0 | 35.93 | 5.10 | F |
3532 | 6501 | 1.006832 | CCCCGAATTACTTGTCGCAG | 58.993 | 55.000 | 0.0 | 0.0 | 35.93 | 5.18 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2413 | 5326 | 0.318107 | CAGCTTTGGACTGCCGTTTG | 60.318 | 55.000 | 0.00 | 0.00 | 36.79 | 2.93 | R |
2795 | 5710 | 1.816835 | ACATCGTACGGATCACTGTGT | 59.183 | 47.619 | 16.52 | 5.26 | 36.89 | 3.72 | R |
3505 | 6474 | 0.043637 | AGTAATTCGGGGTGGAGGGA | 59.956 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 | R |
4694 | 7677 | 1.081906 | GTGCGTGCTGTCCAACATG | 60.082 | 57.895 | 0.00 | 0.00 | 0.00 | 3.21 | R |
5354 | 8382 | 2.241722 | CACTTTCCGCAAGCAAATACG | 58.758 | 47.619 | 0.00 | 0.00 | 35.65 | 3.06 | R |
5355 | 8383 | 3.282831 | ACACTTTCCGCAAGCAAATAC | 57.717 | 42.857 | 0.00 | 0.00 | 35.65 | 1.89 | R |
5365 | 8393 | 4.217754 | TGATGTTGTTAACACTTTCCGC | 57.782 | 40.909 | 8.07 | 0.00 | 45.50 | 5.54 | R |
5434 | 8464 | 4.340666 | TGGCATAACTTTTGCAGAAACTCA | 59.659 | 37.500 | 6.55 | 0.00 | 41.95 | 3.41 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
45 | 46 | 2.684881 | GCCTAGCTGTTAACATGCACAT | 59.315 | 45.455 | 23.12 | 11.49 | 0.00 | 3.21 |
47 | 48 | 2.642139 | AGCTGTTAACATGCACATGC | 57.358 | 45.000 | 23.12 | 15.65 | 42.39 | 4.06 |
144 | 153 | 2.284190 | GCTTATGAGTCCTGCTGGTTC | 58.716 | 52.381 | 9.73 | 9.29 | 34.23 | 3.62 |
186 | 195 | 5.877012 | AGTCAGCATTTCTCATGTAATCGTT | 59.123 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
197 | 206 | 7.033791 | TCTCATGTAATCGTTAGTTTCAGTCC | 58.966 | 38.462 | 0.00 | 0.00 | 0.00 | 3.85 |
199 | 208 | 8.058667 | TCATGTAATCGTTAGTTTCAGTCCTA | 57.941 | 34.615 | 0.00 | 0.00 | 0.00 | 2.94 |
279 | 290 | 3.629398 | GGAGGGAGTAATGCTCAAATGTG | 59.371 | 47.826 | 0.02 | 0.00 | 45.88 | 3.21 |
320 | 331 | 4.162096 | CTGTAATAGCCTAGTAGCCACG | 57.838 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
360 | 371 | 4.584743 | CAGGGATATGACTACTGTAGCACA | 59.415 | 45.833 | 14.55 | 14.45 | 0.00 | 4.57 |
362 | 373 | 5.661312 | AGGGATATGACTACTGTAGCACAAA | 59.339 | 40.000 | 14.55 | 4.62 | 0.00 | 2.83 |
364 | 375 | 5.986135 | GGATATGACTACTGTAGCACAAAGG | 59.014 | 44.000 | 14.55 | 0.00 | 0.00 | 3.11 |
365 | 376 | 6.183360 | GGATATGACTACTGTAGCACAAAGGA | 60.183 | 42.308 | 14.55 | 4.34 | 0.00 | 3.36 |
367 | 378 | 4.820897 | TGACTACTGTAGCACAAAGGATG | 58.179 | 43.478 | 14.55 | 0.00 | 0.00 | 3.51 |
384 | 1942 | 3.467803 | GGATGTGTATCCCTCCTTTTCG | 58.532 | 50.000 | 0.00 | 0.00 | 46.03 | 3.46 |
385 | 1943 | 3.467803 | GATGTGTATCCCTCCTTTTCGG | 58.532 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
389 | 1947 | 4.286549 | TGTGTATCCCTCCTTTTCGGTTTA | 59.713 | 41.667 | 0.00 | 0.00 | 0.00 | 2.01 |
391 | 1949 | 6.156602 | TGTGTATCCCTCCTTTTCGGTTTATA | 59.843 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
392 | 1950 | 7.049754 | GTGTATCCCTCCTTTTCGGTTTATAA | 58.950 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
394 | 1952 | 5.106876 | TCCCTCCTTTTCGGTTTATAAGG | 57.893 | 43.478 | 0.00 | 0.00 | 38.78 | 2.69 |
398 | 1956 | 6.117488 | CCTCCTTTTCGGTTTATAAGGCTTA | 58.883 | 40.000 | 9.79 | 9.79 | 37.62 | 3.09 |
404 | 1962 | 8.795842 | TTTTCGGTTTATAAGGCTTATCTCAA | 57.204 | 30.769 | 22.39 | 9.63 | 0.00 | 3.02 |
405 | 1963 | 8.795842 | TTTCGGTTTATAAGGCTTATCTCAAA | 57.204 | 30.769 | 22.39 | 14.69 | 0.00 | 2.69 |
406 | 1964 | 8.795842 | TTCGGTTTATAAGGCTTATCTCAAAA | 57.204 | 30.769 | 22.39 | 14.37 | 0.00 | 2.44 |
408 | 1966 | 9.403583 | TCGGTTTATAAGGCTTATCTCAAAATT | 57.596 | 29.630 | 22.39 | 0.00 | 0.00 | 1.82 |
455 | 3140 | 8.928448 | AGATATATGTTGTCATTGGACTAGTGT | 58.072 | 33.333 | 0.00 | 0.00 | 44.61 | 3.55 |
456 | 3141 | 9.547753 | GATATATGTTGTCATTGGACTAGTGTT | 57.452 | 33.333 | 0.00 | 0.00 | 44.61 | 3.32 |
469 | 3154 | 4.776308 | GGACTAGTGTTTAGGGAAAGGAGA | 59.224 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
479 | 3164 | 1.339151 | GGGAAAGGAGAACATGCTCGT | 60.339 | 52.381 | 0.00 | 0.00 | 35.74 | 4.18 |
481 | 3166 | 3.596214 | GGAAAGGAGAACATGCTCGTTA | 58.404 | 45.455 | 8.19 | 0.00 | 40.82 | 3.18 |
485 | 3170 | 1.403780 | GGAGAACATGCTCGTTACCGT | 60.404 | 52.381 | 0.00 | 0.00 | 35.74 | 4.83 |
491 | 3176 | 2.288334 | ACATGCTCGTTACCGTTGTACA | 60.288 | 45.455 | 0.00 | 0.00 | 35.01 | 2.90 |
497 | 3182 | 1.192980 | CGTTACCGTTGTACAAGCACC | 59.807 | 52.381 | 8.98 | 0.00 | 0.00 | 5.01 |
500 | 3185 | 2.170036 | CGTTGTACAAGCACCGCG | 59.830 | 61.111 | 8.98 | 0.00 | 0.00 | 6.46 |
503 | 3188 | 1.004320 | TTGTACAAGCACCGCGGAT | 60.004 | 52.632 | 35.90 | 14.84 | 0.00 | 4.18 |
504 | 3189 | 1.295357 | TTGTACAAGCACCGCGGATG | 61.295 | 55.000 | 35.90 | 25.95 | 0.00 | 3.51 |
559 | 3244 | 4.838486 | CCTCCTGCTCGTCGTCGC | 62.838 | 72.222 | 0.00 | 0.00 | 36.96 | 5.19 |
596 | 3281 | 3.402681 | ATGAGCCGACCAGGGGTG | 61.403 | 66.667 | 0.00 | 0.00 | 41.48 | 4.61 |
597 | 3282 | 3.924013 | ATGAGCCGACCAGGGGTGA | 62.924 | 63.158 | 0.00 | 0.00 | 41.48 | 4.02 |
598 | 3283 | 4.083862 | GAGCCGACCAGGGGTGAC | 62.084 | 72.222 | 0.00 | 0.00 | 41.48 | 3.67 |
614 | 3301 | 0.827089 | TGACAAACACATGGGGCAGG | 60.827 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
671 | 3359 | 1.489560 | AAGGAGGAGGTGGTTTCCCG | 61.490 | 60.000 | 0.00 | 0.00 | 35.20 | 5.14 |
688 | 3381 | 0.686769 | CCGGTGTAGGCTAGGGTTCT | 60.687 | 60.000 | 0.00 | 0.00 | 0.00 | 3.01 |
723 | 3418 | 2.738521 | GCAGCGAAACAGAGCCGA | 60.739 | 61.111 | 0.00 | 0.00 | 0.00 | 5.54 |
725 | 3420 | 2.002127 | CAGCGAAACAGAGCCGATC | 58.998 | 57.895 | 0.00 | 0.00 | 0.00 | 3.69 |
757 | 3452 | 5.669848 | GCAAGTCAGATTGATGAACGTCTTC | 60.670 | 44.000 | 0.00 | 0.00 | 31.55 | 2.87 |
758 | 3453 | 5.398603 | AGTCAGATTGATGAACGTCTTCT | 57.601 | 39.130 | 0.00 | 0.00 | 0.00 | 2.85 |
760 | 3455 | 6.559810 | AGTCAGATTGATGAACGTCTTCTAG | 58.440 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
761 | 3456 | 6.375736 | AGTCAGATTGATGAACGTCTTCTAGA | 59.624 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
762 | 3457 | 7.030165 | GTCAGATTGATGAACGTCTTCTAGAA | 58.970 | 38.462 | 4.81 | 4.81 | 0.00 | 2.10 |
763 | 3458 | 7.542477 | GTCAGATTGATGAACGTCTTCTAGAAA | 59.458 | 37.037 | 6.63 | 0.00 | 0.00 | 2.52 |
764 | 3459 | 8.088365 | TCAGATTGATGAACGTCTTCTAGAAAA | 58.912 | 33.333 | 6.63 | 0.00 | 0.00 | 2.29 |
765 | 3460 | 8.712363 | CAGATTGATGAACGTCTTCTAGAAAAA | 58.288 | 33.333 | 6.63 | 0.00 | 0.00 | 1.94 |
815 | 3594 | 7.284261 | TGATTTACCAACTTCATCACAAGTGAA | 59.716 | 33.333 | 7.02 | 0.00 | 43.58 | 3.18 |
822 | 3601 | 5.526115 | ACTTCATCACAAGTGAATTTGCAG | 58.474 | 37.500 | 7.02 | 4.06 | 43.58 | 4.41 |
870 | 3734 | 9.248291 | TCACTCAAAAAGCAAATCTGTTATTTC | 57.752 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
897 | 3761 | 3.968724 | GCAAAAACTTCACGAGTCATGTC | 59.031 | 43.478 | 0.00 | 0.00 | 37.72 | 3.06 |
916 | 3780 | 1.975680 | TCGGGCCAAGAAAAGTACTCT | 59.024 | 47.619 | 4.39 | 0.00 | 0.00 | 3.24 |
1362 | 4261 | 2.695087 | CGCGTCGGAATTTTGTGTG | 58.305 | 52.632 | 0.00 | 0.00 | 0.00 | 3.82 |
1363 | 4262 | 0.041663 | CGCGTCGGAATTTTGTGTGT | 60.042 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
1364 | 4263 | 1.670326 | GCGTCGGAATTTTGTGTGTC | 58.330 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1596 | 4499 | 2.552155 | GGAATCTATTGCCCGGCACATA | 60.552 | 50.000 | 13.00 | 11.98 | 38.71 | 2.29 |
1602 | 4505 | 2.513897 | GCCCGGCACATACCTGAC | 60.514 | 66.667 | 3.91 | 0.00 | 0.00 | 3.51 |
1635 | 4538 | 9.229784 | GTGATTTGTAGCTCACATTTTATCATG | 57.770 | 33.333 | 0.00 | 0.00 | 41.13 | 3.07 |
1834 | 4747 | 2.059541 | AGTTAAAGAGTCGAACTGCGC | 58.940 | 47.619 | 0.00 | 0.00 | 40.61 | 6.09 |
1935 | 4848 | 3.817084 | TGTGTTTGCAGAGAAGATGAAGG | 59.183 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
2049 | 4962 | 8.084073 | TCTCTTTGATGAAATGTGAAATTCACC | 58.916 | 33.333 | 21.75 | 8.19 | 46.40 | 4.02 |
2053 | 4966 | 7.053316 | TGATGAAATGTGAAATTCACCACTT | 57.947 | 32.000 | 21.75 | 12.57 | 46.40 | 3.16 |
2057 | 4970 | 6.098124 | TGAAATGTGAAATTCACCACTTCCTT | 59.902 | 34.615 | 21.75 | 6.03 | 46.40 | 3.36 |
2115 | 5028 | 6.960468 | TCTAGACGTATTTCAGTGCTAGATG | 58.040 | 40.000 | 0.00 | 0.00 | 30.90 | 2.90 |
2146 | 5059 | 4.546570 | TGAGCGACAAGTAATATGGATCG | 58.453 | 43.478 | 0.00 | 0.00 | 0.00 | 3.69 |
2164 | 5077 | 4.278919 | GGATCGGAGGGAGTACTAAGAAAG | 59.721 | 50.000 | 0.00 | 0.00 | 0.00 | 2.62 |
2188 | 5101 | 8.375493 | AGTACTGACCCTGAATGTATCTTTTA | 57.625 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
2229 | 5142 | 3.440173 | ACGAAGCAAACCGATTCATCAAT | 59.560 | 39.130 | 0.00 | 0.00 | 40.14 | 2.57 |
2242 | 5155 | 3.853831 | TCATCAATGATGCACACCAAC | 57.146 | 42.857 | 17.81 | 0.00 | 39.63 | 3.77 |
2302 | 5215 | 6.749923 | AACATGCCTCTTCATTTCTTACTC | 57.250 | 37.500 | 0.00 | 0.00 | 0.00 | 2.59 |
2351 | 5264 | 7.278646 | TGTGATTATTATGTCTGTCTGTTCTGC | 59.721 | 37.037 | 0.00 | 0.00 | 0.00 | 4.26 |
2413 | 5326 | 1.137513 | CAACAACCTCCGAACGTCTC | 58.862 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2478 | 5391 | 4.989168 | CCCAATGAGGCGAGTAAGTATTAC | 59.011 | 45.833 | 0.00 | 0.00 | 43.66 | 1.89 |
2495 | 5408 | 8.429493 | AAGTATTACGGTCTTGGCTATTTTAC | 57.571 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
2498 | 5411 | 4.546829 | ACGGTCTTGGCTATTTTACTGA | 57.453 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
2516 | 5429 | 5.567138 | ACTGACTTTGTGTTTTCTTCCTG | 57.433 | 39.130 | 0.00 | 0.00 | 0.00 | 3.86 |
2541 | 5454 | 9.087424 | TGTATATGTATATTTTGAGATCGCTGC | 57.913 | 33.333 | 0.00 | 0.00 | 0.00 | 5.25 |
2581 | 5494 | 8.522003 | TGCATTCAACTTTGCTCATATTTAGAA | 58.478 | 29.630 | 0.00 | 0.00 | 39.60 | 2.10 |
2731 | 5646 | 4.122776 | CCTGAGTTACCATGCATAGACAC | 58.877 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
2795 | 5710 | 8.567198 | TTATAGATGGAGAAAAGAAGGATGGA | 57.433 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
2945 | 5861 | 9.739276 | ATTTGTTGTTCTGATATTTAGTCTCCA | 57.261 | 29.630 | 0.00 | 0.00 | 0.00 | 3.86 |
3030 | 5949 | 7.012894 | TGTCCATTATTTTACGATTCATGGTCC | 59.987 | 37.037 | 0.00 | 0.00 | 32.92 | 4.46 |
3048 | 5967 | 3.945921 | GGTCCTAAGTAAATTGCACCCTC | 59.054 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
3050 | 5969 | 2.943033 | CCTAAGTAAATTGCACCCTCCG | 59.057 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3064 | 5985 | 3.639094 | CACCCTCCGATTCTGTCTAATCT | 59.361 | 47.826 | 0.00 | 0.00 | 34.34 | 2.40 |
3198 | 6162 | 8.458573 | ACCAACAAGACTATCATGTTTTGTTA | 57.541 | 30.769 | 13.27 | 0.00 | 46.40 | 2.41 |
3200 | 6164 | 9.912634 | CCAACAAGACTATCATGTTTTGTTATT | 57.087 | 29.630 | 13.27 | 0.00 | 46.40 | 1.40 |
3202 | 6166 | 8.970691 | ACAAGACTATCATGTTTTGTTATTGC | 57.029 | 30.769 | 0.00 | 0.00 | 40.72 | 3.56 |
3221 | 6187 | 6.940831 | ATTGCAATATTGTTTTATTGGGCC | 57.059 | 33.333 | 11.02 | 0.00 | 39.11 | 5.80 |
3225 | 6191 | 6.126825 | TGCAATATTGTTTTATTGGGCCAGAT | 60.127 | 34.615 | 16.61 | 6.38 | 39.11 | 2.90 |
3241 | 6207 | 4.034510 | GGCCAGATAGATTGTTTGAGAACG | 59.965 | 45.833 | 0.00 | 0.00 | 38.65 | 3.95 |
3244 | 6210 | 5.292101 | CCAGATAGATTGTTTGAGAACGGTC | 59.708 | 44.000 | 0.00 | 0.00 | 38.65 | 4.79 |
3249 | 6215 | 2.031258 | TGTTTGAGAACGGTCTGCAA | 57.969 | 45.000 | 8.28 | 9.53 | 38.65 | 4.08 |
3250 | 6216 | 2.360844 | TGTTTGAGAACGGTCTGCAAA | 58.639 | 42.857 | 8.28 | 15.17 | 38.65 | 3.68 |
3253 | 6219 | 4.576873 | TGTTTGAGAACGGTCTGCAAATAA | 59.423 | 37.500 | 22.27 | 15.00 | 38.65 | 1.40 |
3257 | 6223 | 4.873827 | TGAGAACGGTCTGCAAATAATACC | 59.126 | 41.667 | 8.28 | 0.00 | 32.80 | 2.73 |
3258 | 6224 | 4.839121 | AGAACGGTCTGCAAATAATACCA | 58.161 | 39.130 | 0.00 | 0.00 | 30.83 | 3.25 |
3286 | 6252 | 5.713025 | CATTTGGTTCTGAATGTTGGGTAG | 58.287 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
3299 | 6265 | 9.249053 | TGAATGTTGGGTAGCATAATTTTCTTA | 57.751 | 29.630 | 0.00 | 0.00 | 0.00 | 2.10 |
3351 | 6317 | 6.093082 | TCAGCATTGCAATTCATATCCTATCG | 59.907 | 38.462 | 9.83 | 0.00 | 0.00 | 2.92 |
3389 | 6355 | 1.076513 | AGCCGGTTTTGGGGTAAGATT | 59.923 | 47.619 | 1.90 | 0.00 | 32.50 | 2.40 |
3401 | 6367 | 3.883489 | GGGGTAAGATTCAACTATGTGCC | 59.117 | 47.826 | 0.00 | 0.00 | 0.00 | 5.01 |
3410 | 6376 | 8.034313 | AGATTCAACTATGTGCCCTTAATCTA | 57.966 | 34.615 | 0.00 | 0.00 | 31.31 | 1.98 |
3456 | 6425 | 6.222389 | AGTTAGCATGCTACATCTGAAGATC | 58.778 | 40.000 | 26.87 | 3.52 | 31.21 | 2.75 |
3473 | 6442 | 5.831525 | TGAAGATCCAATCATTCAATCCTGG | 59.168 | 40.000 | 0.00 | 0.00 | 0.00 | 4.45 |
3497 | 6466 | 7.554835 | TGGCGGTCAAACAATATAAACTTCTAT | 59.445 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
3513 | 6482 | 5.447757 | ACTTCTATGTAGTACTCCCTCCAC | 58.552 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
3515 | 6484 | 2.473576 | ATGTAGTACTCCCTCCACCC | 57.526 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3516 | 6485 | 0.337428 | TGTAGTACTCCCTCCACCCC | 59.663 | 60.000 | 0.00 | 0.00 | 0.00 | 4.95 |
3517 | 6486 | 0.754587 | GTAGTACTCCCTCCACCCCG | 60.755 | 65.000 | 0.00 | 0.00 | 0.00 | 5.73 |
3518 | 6487 | 0.920763 | TAGTACTCCCTCCACCCCGA | 60.921 | 60.000 | 0.00 | 0.00 | 0.00 | 5.14 |
3519 | 6488 | 1.305549 | GTACTCCCTCCACCCCGAA | 60.306 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
3520 | 6489 | 0.690077 | GTACTCCCTCCACCCCGAAT | 60.690 | 60.000 | 0.00 | 0.00 | 0.00 | 3.34 |
3521 | 6490 | 0.043637 | TACTCCCTCCACCCCGAATT | 59.956 | 55.000 | 0.00 | 0.00 | 0.00 | 2.17 |
3522 | 6491 | 0.043637 | ACTCCCTCCACCCCGAATTA | 59.956 | 55.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3523 | 6492 | 0.468648 | CTCCCTCCACCCCGAATTAC | 59.531 | 60.000 | 0.00 | 0.00 | 0.00 | 1.89 |
3524 | 6493 | 0.043637 | TCCCTCCACCCCGAATTACT | 59.956 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3525 | 6494 | 0.916809 | CCCTCCACCCCGAATTACTT | 59.083 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3526 | 6495 | 1.408266 | CCCTCCACCCCGAATTACTTG | 60.408 | 57.143 | 0.00 | 0.00 | 0.00 | 3.16 |
3527 | 6496 | 1.280998 | CCTCCACCCCGAATTACTTGT | 59.719 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
3528 | 6497 | 2.629051 | CTCCACCCCGAATTACTTGTC | 58.371 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
3529 | 6498 | 1.066716 | TCCACCCCGAATTACTTGTCG | 60.067 | 52.381 | 0.00 | 0.00 | 37.01 | 4.35 |
3530 | 6499 | 0.725117 | CACCCCGAATTACTTGTCGC | 59.275 | 55.000 | 0.00 | 0.00 | 35.93 | 5.19 |
3531 | 6500 | 0.322322 | ACCCCGAATTACTTGTCGCA | 59.678 | 50.000 | 0.00 | 0.00 | 35.93 | 5.10 |
3532 | 6501 | 1.006832 | CCCCGAATTACTTGTCGCAG | 58.993 | 55.000 | 0.00 | 0.00 | 35.93 | 5.18 |
3533 | 6502 | 1.404986 | CCCCGAATTACTTGTCGCAGA | 60.405 | 52.381 | 0.00 | 0.00 | 35.93 | 4.26 |
3534 | 6503 | 2.343101 | CCCGAATTACTTGTCGCAGAA | 58.657 | 47.619 | 0.00 | 0.00 | 39.69 | 3.02 |
3535 | 6504 | 2.739913 | CCCGAATTACTTGTCGCAGAAA | 59.260 | 45.455 | 0.00 | 0.00 | 39.69 | 2.52 |
3536 | 6505 | 3.374058 | CCCGAATTACTTGTCGCAGAAAT | 59.626 | 43.478 | 0.00 | 0.00 | 39.69 | 2.17 |
3537 | 6506 | 4.334443 | CCGAATTACTTGTCGCAGAAATG | 58.666 | 43.478 | 0.00 | 0.00 | 39.69 | 2.32 |
3538 | 6507 | 3.780801 | CGAATTACTTGTCGCAGAAATGC | 59.219 | 43.478 | 0.00 | 0.00 | 39.69 | 3.56 |
3539 | 6508 | 4.668941 | CGAATTACTTGTCGCAGAAATGCA | 60.669 | 41.667 | 0.00 | 0.00 | 39.69 | 3.96 |
3540 | 6509 | 4.970662 | ATTACTTGTCGCAGAAATGCAT | 57.029 | 36.364 | 0.00 | 0.00 | 39.69 | 3.96 |
3541 | 6510 | 2.624316 | ACTTGTCGCAGAAATGCATG | 57.376 | 45.000 | 0.00 | 0.00 | 39.69 | 4.06 |
3542 | 6511 | 1.881973 | ACTTGTCGCAGAAATGCATGT | 59.118 | 42.857 | 0.00 | 0.00 | 39.69 | 3.21 |
3543 | 6512 | 3.073678 | ACTTGTCGCAGAAATGCATGTA | 58.926 | 40.909 | 0.00 | 0.00 | 39.69 | 2.29 |
3544 | 6513 | 3.691118 | ACTTGTCGCAGAAATGCATGTAT | 59.309 | 39.130 | 0.00 | 0.00 | 39.69 | 2.29 |
3545 | 6514 | 3.950087 | TGTCGCAGAAATGCATGTATC | 57.050 | 42.857 | 0.00 | 0.00 | 39.69 | 2.24 |
3546 | 6515 | 3.534554 | TGTCGCAGAAATGCATGTATCT | 58.465 | 40.909 | 0.00 | 1.70 | 39.69 | 1.98 |
3547 | 6516 | 4.692228 | TGTCGCAGAAATGCATGTATCTA | 58.308 | 39.130 | 0.00 | 0.00 | 39.69 | 1.98 |
3548 | 6517 | 4.746611 | TGTCGCAGAAATGCATGTATCTAG | 59.253 | 41.667 | 0.00 | 3.33 | 39.69 | 2.43 |
3549 | 6518 | 4.984785 | GTCGCAGAAATGCATGTATCTAGA | 59.015 | 41.667 | 0.00 | 0.00 | 39.69 | 2.43 |
3550 | 6519 | 5.636965 | GTCGCAGAAATGCATGTATCTAGAT | 59.363 | 40.000 | 10.73 | 10.73 | 39.69 | 1.98 |
3551 | 6520 | 5.636543 | TCGCAGAAATGCATGTATCTAGATG | 59.363 | 40.000 | 15.79 | 0.83 | 34.41 | 2.90 |
3552 | 6521 | 5.407691 | CGCAGAAATGCATGTATCTAGATGT | 59.592 | 40.000 | 15.79 | 0.00 | 34.41 | 3.06 |
3553 | 6522 | 6.587608 | CGCAGAAATGCATGTATCTAGATGTA | 59.412 | 38.462 | 15.79 | 4.44 | 34.41 | 2.29 |
3554 | 6523 | 7.277319 | CGCAGAAATGCATGTATCTAGATGTAT | 59.723 | 37.037 | 15.79 | 6.61 | 34.64 | 2.29 |
3555 | 6524 | 8.944029 | GCAGAAATGCATGTATCTAGATGTATT | 58.056 | 33.333 | 15.79 | 8.33 | 41.53 | 1.89 |
3582 | 6551 | 9.547753 | TTTAGTTCTAGATACATCCATTTCTGC | 57.452 | 33.333 | 0.00 | 0.00 | 0.00 | 4.26 |
3583 | 6552 | 6.219473 | AGTTCTAGATACATCCATTTCTGCG | 58.781 | 40.000 | 0.00 | 0.00 | 0.00 | 5.18 |
3584 | 6553 | 6.040955 | AGTTCTAGATACATCCATTTCTGCGA | 59.959 | 38.462 | 0.00 | 0.00 | 0.00 | 5.10 |
3585 | 6554 | 5.773575 | TCTAGATACATCCATTTCTGCGAC | 58.226 | 41.667 | 0.00 | 0.00 | 0.00 | 5.19 |
3586 | 6555 | 4.406648 | AGATACATCCATTTCTGCGACA | 57.593 | 40.909 | 0.00 | 0.00 | 0.00 | 4.35 |
3587 | 6556 | 4.769688 | AGATACATCCATTTCTGCGACAA | 58.230 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
3588 | 6557 | 4.813161 | AGATACATCCATTTCTGCGACAAG | 59.187 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
3589 | 6558 | 2.783135 | ACATCCATTTCTGCGACAAGT | 58.217 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
3590 | 6559 | 3.937814 | ACATCCATTTCTGCGACAAGTA | 58.062 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
3591 | 6560 | 4.323417 | ACATCCATTTCTGCGACAAGTAA | 58.677 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
3592 | 6561 | 4.943705 | ACATCCATTTCTGCGACAAGTAAT | 59.056 | 37.500 | 0.00 | 0.00 | 0.00 | 1.89 |
3593 | 6562 | 5.415701 | ACATCCATTTCTGCGACAAGTAATT | 59.584 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3594 | 6563 | 5.545658 | TCCATTTCTGCGACAAGTAATTC | 57.454 | 39.130 | 0.00 | 0.00 | 0.00 | 2.17 |
3595 | 6564 | 5.000591 | TCCATTTCTGCGACAAGTAATTCA | 58.999 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
3596 | 6565 | 5.471797 | TCCATTTCTGCGACAAGTAATTCAA | 59.528 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
3597 | 6566 | 5.796935 | CCATTTCTGCGACAAGTAATTCAAG | 59.203 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3598 | 6567 | 6.348458 | CCATTTCTGCGACAAGTAATTCAAGA | 60.348 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
3599 | 6568 | 6.801539 | TTTCTGCGACAAGTAATTCAAGAT | 57.198 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
3600 | 6569 | 5.784750 | TCTGCGACAAGTAATTCAAGATG | 57.215 | 39.130 | 0.00 | 0.00 | 0.00 | 2.90 |
3601 | 6570 | 4.631377 | TCTGCGACAAGTAATTCAAGATGG | 59.369 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
3602 | 6571 | 4.574892 | TGCGACAAGTAATTCAAGATGGA | 58.425 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
3603 | 6572 | 4.631377 | TGCGACAAGTAATTCAAGATGGAG | 59.369 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
3604 | 6573 | 4.034510 | GCGACAAGTAATTCAAGATGGAGG | 59.965 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
3605 | 6574 | 4.572389 | CGACAAGTAATTCAAGATGGAGGG | 59.428 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
3606 | 6575 | 5.626809 | CGACAAGTAATTCAAGATGGAGGGA | 60.627 | 44.000 | 0.00 | 0.00 | 0.00 | 4.20 |
3607 | 6576 | 5.749462 | ACAAGTAATTCAAGATGGAGGGAG | 58.251 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
3608 | 6577 | 5.251700 | ACAAGTAATTCAAGATGGAGGGAGT | 59.748 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3609 | 6578 | 6.443849 | ACAAGTAATTCAAGATGGAGGGAGTA | 59.556 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
3610 | 6579 | 7.127955 | ACAAGTAATTCAAGATGGAGGGAGTAT | 59.872 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
3611 | 6580 | 7.072263 | AGTAATTCAAGATGGAGGGAGTATG | 57.928 | 40.000 | 0.00 | 0.00 | 0.00 | 2.39 |
3612 | 6581 | 6.846505 | AGTAATTCAAGATGGAGGGAGTATGA | 59.153 | 38.462 | 0.00 | 0.00 | 0.00 | 2.15 |
3613 | 6582 | 6.581388 | AATTCAAGATGGAGGGAGTATGAA | 57.419 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
3614 | 6583 | 6.776887 | ATTCAAGATGGAGGGAGTATGAAT | 57.223 | 37.500 | 0.00 | 0.00 | 32.92 | 2.57 |
3615 | 6584 | 7.878621 | ATTCAAGATGGAGGGAGTATGAATA | 57.121 | 36.000 | 0.00 | 0.00 | 35.25 | 1.75 |
3616 | 6585 | 7.690454 | TTCAAGATGGAGGGAGTATGAATAA | 57.310 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3617 | 6586 | 7.878621 | TCAAGATGGAGGGAGTATGAATAAT | 57.121 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
3618 | 6587 | 8.972662 | TCAAGATGGAGGGAGTATGAATAATA | 57.027 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
3619 | 6588 | 9.392506 | TCAAGATGGAGGGAGTATGAATAATAA | 57.607 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
3688 | 6659 | 7.561722 | TCTCTGTGGATATAACTTGTCTAAGCT | 59.438 | 37.037 | 0.00 | 0.00 | 37.43 | 3.74 |
3689 | 6660 | 8.079211 | TCTGTGGATATAACTTGTCTAAGCTT | 57.921 | 34.615 | 3.48 | 3.48 | 37.43 | 3.74 |
3717 | 6688 | 6.293298 | CGTAGAACCTTATACATAGTCAGCGT | 60.293 | 42.308 | 0.00 | 0.00 | 0.00 | 5.07 |
3718 | 6689 | 6.074544 | AGAACCTTATACATAGTCAGCGTC | 57.925 | 41.667 | 0.00 | 0.00 | 0.00 | 5.19 |
3719 | 6690 | 4.485024 | ACCTTATACATAGTCAGCGTCG | 57.515 | 45.455 | 0.00 | 0.00 | 0.00 | 5.12 |
3720 | 6691 | 3.252701 | ACCTTATACATAGTCAGCGTCGG | 59.747 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
3803 | 6778 | 7.157347 | TGGATTTCTAATAGCATGAGTAGCAG | 58.843 | 38.462 | 0.00 | 0.00 | 0.00 | 4.24 |
3881 | 6856 | 3.975168 | TTGTACTAGGCTTCCTGTTCC | 57.025 | 47.619 | 0.00 | 0.00 | 34.61 | 3.62 |
3932 | 6907 | 2.168521 | CACACGACAATCCCAGAGGTAT | 59.831 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
3933 | 6908 | 3.383505 | CACACGACAATCCCAGAGGTATA | 59.616 | 47.826 | 0.00 | 0.00 | 0.00 | 1.47 |
3936 | 6911 | 3.890147 | ACGACAATCCCAGAGGTATACTC | 59.110 | 47.826 | 2.25 | 0.00 | 46.98 | 2.59 |
3950 | 6925 | 4.164413 | AGGTATACTCTCAAGGAAAAGGCC | 59.836 | 45.833 | 2.25 | 0.00 | 0.00 | 5.19 |
3966 | 6941 | 1.959985 | AGGCCACATATCTCTGTCTCG | 59.040 | 52.381 | 5.01 | 0.00 | 0.00 | 4.04 |
3971 | 6946 | 4.740695 | GCCACATATCTCTGTCTCGTTAAC | 59.259 | 45.833 | 0.00 | 0.00 | 0.00 | 2.01 |
4040 | 7018 | 2.484065 | GGTTTACCCACTTTTTGTGCCC | 60.484 | 50.000 | 0.00 | 0.00 | 44.92 | 5.36 |
4064 | 7042 | 3.371898 | GGCAAAATAATTGCTCTGTTGGC | 59.628 | 43.478 | 12.34 | 0.00 | 44.36 | 4.52 |
4442 | 7420 | 2.346803 | GCAAGCGTATTCTGGTTCTCA | 58.653 | 47.619 | 0.00 | 0.00 | 0.00 | 3.27 |
4466 | 7444 | 3.669122 | CAGCGCGTACTATCTTCCATAAC | 59.331 | 47.826 | 8.43 | 0.00 | 0.00 | 1.89 |
4492 | 7470 | 9.321562 | CCTGCTCAAATTTGCAAATTATATTCT | 57.678 | 29.630 | 31.87 | 16.31 | 37.62 | 2.40 |
4513 | 7491 | 6.268825 | TCTCGTATCTTTCTTACAACTGCT | 57.731 | 37.500 | 0.00 | 0.00 | 0.00 | 4.24 |
4516 | 7494 | 4.330074 | CGTATCTTTCTTACAACTGCTGGG | 59.670 | 45.833 | 0.00 | 0.00 | 0.00 | 4.45 |
4525 | 7503 | 3.439857 | ACAACTGCTGGGAATGTACAT | 57.560 | 42.857 | 1.41 | 1.41 | 0.00 | 2.29 |
4549 | 7527 | 7.987268 | TCTAAAGATGTCGTAGCACTATTTG | 57.013 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
4550 | 7528 | 7.169982 | ATCTAAAGATGTCGTAGCACTATTTGC | 59.830 | 37.037 | 0.00 | 0.00 | 41.73 | 3.68 |
4694 | 7677 | 1.022735 | CCATCTCATCCAACAGCAGC | 58.977 | 55.000 | 0.00 | 0.00 | 0.00 | 5.25 |
4735 | 7718 | 3.181465 | ACAGCTATCATGGTAAACTCCCG | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 5.14 |
4822 | 7807 | 1.267121 | TTAACCAGCCGAGCTCTCTT | 58.733 | 50.000 | 12.85 | 0.00 | 36.40 | 2.85 |
5117 | 8112 | 9.467796 | TGATCATATGGTTTTGGTTTGTGTATA | 57.532 | 29.630 | 2.13 | 0.00 | 0.00 | 1.47 |
5226 | 8225 | 9.716507 | GTACAGCACCTGTAATTTGTAAATATG | 57.283 | 33.333 | 6.66 | 0.00 | 46.55 | 1.78 |
5227 | 8226 | 8.348285 | ACAGCACCTGTAATTTGTAAATATGT | 57.652 | 30.769 | 0.00 | 0.00 | 43.46 | 2.29 |
5228 | 8227 | 9.456147 | ACAGCACCTGTAATTTGTAAATATGTA | 57.544 | 29.630 | 0.00 | 0.00 | 43.46 | 2.29 |
5229 | 8228 | 9.716507 | CAGCACCTGTAATTTGTAAATATGTAC | 57.283 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
5230 | 8229 | 9.681062 | AGCACCTGTAATTTGTAAATATGTACT | 57.319 | 29.630 | 4.68 | 0.00 | 0.00 | 2.73 |
5324 | 8349 | 3.936372 | TGTTGCTGTACCTCTCTACAC | 57.064 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
5346 | 8374 | 6.039270 | ACACAAGCATCTGCAAAGTAAAGTAA | 59.961 | 34.615 | 4.79 | 0.00 | 45.16 | 2.24 |
5347 | 8375 | 7.086376 | CACAAGCATCTGCAAAGTAAAGTAAT | 58.914 | 34.615 | 4.79 | 0.00 | 45.16 | 1.89 |
5348 | 8376 | 7.596248 | CACAAGCATCTGCAAAGTAAAGTAATT | 59.404 | 33.333 | 4.79 | 0.00 | 45.16 | 1.40 |
5349 | 8377 | 8.792633 | ACAAGCATCTGCAAAGTAAAGTAATTA | 58.207 | 29.630 | 4.79 | 0.00 | 45.16 | 1.40 |
5367 | 8395 | 7.342194 | AGTAATTATGTACGTATTTGCTTGCG | 58.658 | 34.615 | 12.03 | 0.00 | 0.00 | 4.85 |
5380 | 8409 | 2.017782 | TGCTTGCGGAAAGTGTTAACA | 58.982 | 42.857 | 3.59 | 3.59 | 38.25 | 2.41 |
5407 | 8436 | 5.904941 | TCATGCCAATGTTGATAAATGACC | 58.095 | 37.500 | 0.00 | 0.00 | 35.15 | 4.02 |
5408 | 8437 | 5.657745 | TCATGCCAATGTTGATAAATGACCT | 59.342 | 36.000 | 0.00 | 0.00 | 35.15 | 3.85 |
5421 | 8451 | 8.648698 | TGATAAATGACCTGAAGATTTGGAAA | 57.351 | 30.769 | 0.00 | 0.00 | 0.00 | 3.13 |
5429 | 8459 | 7.016465 | TGACCTGAAGATTTGGAAAATGGATTT | 59.984 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
5430 | 8460 | 7.389232 | ACCTGAAGATTTGGAAAATGGATTTC | 58.611 | 34.615 | 0.00 | 0.00 | 45.55 | 2.17 |
5431 | 8461 | 7.236225 | ACCTGAAGATTTGGAAAATGGATTTCT | 59.764 | 33.333 | 1.47 | 0.00 | 45.57 | 2.52 |
5432 | 8462 | 8.098912 | CCTGAAGATTTGGAAAATGGATTTCTT | 58.901 | 33.333 | 1.47 | 0.00 | 45.57 | 2.52 |
5441 | 8471 | 9.927668 | TTGGAAAATGGATTTCTTATGAGTTTC | 57.072 | 29.630 | 1.47 | 0.00 | 45.57 | 2.78 |
5442 | 8472 | 9.312904 | TGGAAAATGGATTTCTTATGAGTTTCT | 57.687 | 29.630 | 0.00 | 0.00 | 45.57 | 2.52 |
5443 | 8473 | 9.578439 | GGAAAATGGATTTCTTATGAGTTTCTG | 57.422 | 33.333 | 0.00 | 0.00 | 45.57 | 3.02 |
5444 | 8474 | 8.992835 | AAAATGGATTTCTTATGAGTTTCTGC | 57.007 | 30.769 | 0.00 | 0.00 | 0.00 | 4.26 |
5445 | 8475 | 7.707624 | AATGGATTTCTTATGAGTTTCTGCA | 57.292 | 32.000 | 0.00 | 0.00 | 0.00 | 4.41 |
5446 | 8476 | 7.707624 | ATGGATTTCTTATGAGTTTCTGCAA | 57.292 | 32.000 | 0.00 | 0.00 | 0.00 | 4.08 |
5447 | 8477 | 7.523293 | TGGATTTCTTATGAGTTTCTGCAAA | 57.477 | 32.000 | 0.00 | 0.00 | 0.00 | 3.68 |
5448 | 8478 | 7.950512 | TGGATTTCTTATGAGTTTCTGCAAAA | 58.049 | 30.769 | 0.00 | 0.00 | 0.00 | 2.44 |
5449 | 8479 | 8.084073 | TGGATTTCTTATGAGTTTCTGCAAAAG | 58.916 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
5450 | 8480 | 8.084684 | GGATTTCTTATGAGTTTCTGCAAAAGT | 58.915 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
5451 | 8481 | 9.468532 | GATTTCTTATGAGTTTCTGCAAAAGTT | 57.531 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
5454 | 8484 | 9.897744 | TTCTTATGAGTTTCTGCAAAAGTTATG | 57.102 | 29.630 | 12.48 | 0.00 | 0.00 | 1.90 |
5455 | 8485 | 8.023128 | TCTTATGAGTTTCTGCAAAAGTTATGC | 58.977 | 33.333 | 12.48 | 0.00 | 44.08 | 3.14 |
5456 | 8486 | 4.870363 | TGAGTTTCTGCAAAAGTTATGCC | 58.130 | 39.130 | 0.00 | 0.00 | 43.16 | 4.40 |
5457 | 8487 | 4.340666 | TGAGTTTCTGCAAAAGTTATGCCA | 59.659 | 37.500 | 0.00 | 0.00 | 43.16 | 4.92 |
5458 | 8488 | 5.010922 | TGAGTTTCTGCAAAAGTTATGCCAT | 59.989 | 36.000 | 0.00 | 0.00 | 43.16 | 4.40 |
5459 | 8489 | 5.857268 | AGTTTCTGCAAAAGTTATGCCATT | 58.143 | 33.333 | 0.00 | 0.00 | 43.16 | 3.16 |
5460 | 8490 | 6.290605 | AGTTTCTGCAAAAGTTATGCCATTT | 58.709 | 32.000 | 0.00 | 0.00 | 43.16 | 2.32 |
5461 | 8491 | 6.424812 | AGTTTCTGCAAAAGTTATGCCATTTC | 59.575 | 34.615 | 0.00 | 0.00 | 43.16 | 2.17 |
5468 | 8498 | 7.658982 | TGCAAAAGTTATGCCATTTCATTTGTA | 59.341 | 29.630 | 0.00 | 4.84 | 43.16 | 2.41 |
5478 | 8508 | 8.613060 | TGCCATTTCATTTGTATTTTAGCAAA | 57.387 | 26.923 | 0.00 | 0.00 | 38.68 | 3.68 |
5537 | 8567 | 5.328691 | CGGCAGCGTATAAATTTTTGAGAA | 58.671 | 37.500 | 0.00 | 0.00 | 0.00 | 2.87 |
5683 | 8727 | 3.859414 | GAGCAGCCTCCGAGCCAT | 61.859 | 66.667 | 0.00 | 0.00 | 31.68 | 4.40 |
5950 | 8997 | 1.066908 | GATGCTAGTGAGAGAAGCGCT | 59.933 | 52.381 | 2.64 | 2.64 | 39.14 | 5.92 |
5988 | 9035 | 7.464977 | GCAATTGTGATTTGGCATATCTGTTTC | 60.465 | 37.037 | 17.01 | 5.54 | 0.00 | 2.78 |
6002 | 9049 | 7.543172 | GCATATCTGTTTCTTGCTTTTTCATGA | 59.457 | 33.333 | 0.00 | 0.00 | 0.00 | 3.07 |
6006 | 9053 | 6.974622 | TCTGTTTCTTGCTTTTTCATGAAGTC | 59.025 | 34.615 | 8.41 | 0.45 | 33.55 | 3.01 |
6032 | 9083 | 0.890683 | CAGTTCACCTGCCAAATCCC | 59.109 | 55.000 | 0.00 | 0.00 | 33.59 | 3.85 |
6056 | 9107 | 2.596904 | TACTACTGGGCTTCGATTGC | 57.403 | 50.000 | 2.74 | 2.74 | 0.00 | 3.56 |
6073 | 9124 | 3.641437 | TTGCTCGAAATTTGGGAACTG | 57.359 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
6105 | 9156 | 2.035442 | GTCGTTGGAGGAGCTTGCC | 61.035 | 63.158 | 0.00 | 0.00 | 0.00 | 4.52 |
6128 | 9179 | 0.601558 | GTGGTGGCTCTGTAGTTCGA | 59.398 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
6138 | 9189 | 5.815740 | GGCTCTGTAGTTCGATCCAAAATTA | 59.184 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
6152 | 9203 | 9.438291 | CGATCCAAAATTATGTGTTTCTCATAC | 57.562 | 33.333 | 0.00 | 0.00 | 0.00 | 2.39 |
6186 | 9237 | 1.728323 | TGTGTCCTTGTGAGATGGGA | 58.272 | 50.000 | 0.00 | 0.00 | 0.00 | 4.37 |
6187 | 9238 | 1.625315 | TGTGTCCTTGTGAGATGGGAG | 59.375 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
6188 | 9239 | 1.065854 | GTGTCCTTGTGAGATGGGAGG | 60.066 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
6231 | 9282 | 5.368145 | TCTCTGTGAAGCTAATGTGTGTTT | 58.632 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
6233 | 9284 | 6.017934 | TCTCTGTGAAGCTAATGTGTGTTTTC | 60.018 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
6237 | 9288 | 4.334203 | TGAAGCTAATGTGTGTTTTCGTGT | 59.666 | 37.500 | 0.00 | 0.00 | 0.00 | 4.49 |
6335 | 9386 | 4.082125 | CCTGATGGTTTGCTTCTTTACCT | 58.918 | 43.478 | 0.00 | 0.00 | 0.00 | 3.08 |
6336 | 9387 | 4.082571 | CCTGATGGTTTGCTTCTTTACCTG | 60.083 | 45.833 | 0.00 | 0.00 | 0.00 | 4.00 |
6338 | 9389 | 5.626142 | TGATGGTTTGCTTCTTTACCTGTA | 58.374 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
6340 | 9391 | 6.719370 | TGATGGTTTGCTTCTTTACCTGTATT | 59.281 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
6342 | 9393 | 8.644374 | ATGGTTTGCTTCTTTACCTGTATTTA | 57.356 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
6350 | 9407 | 7.484959 | GCTTCTTTACCTGTATTTACACAATGC | 59.515 | 37.037 | 0.00 | 0.00 | 31.93 | 3.56 |
6354 | 9411 | 2.682856 | CCTGTATTTACACAATGCGGCT | 59.317 | 45.455 | 0.00 | 0.00 | 31.93 | 5.52 |
6365 | 9422 | 3.065786 | CACAATGCGGCTGTTCTATTCAT | 59.934 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
6375 | 9432 | 4.728882 | GCTGTTCTATTCATTGCGTTCCAG | 60.729 | 45.833 | 0.00 | 0.00 | 0.00 | 3.86 |
6380 | 9437 | 4.811024 | TCTATTCATTGCGTTCCAGACATC | 59.189 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
6382 | 9439 | 2.076100 | TCATTGCGTTCCAGACATCAC | 58.924 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
6384 | 9441 | 0.948623 | TTGCGTTCCAGACATCACCG | 60.949 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
8 | 9 | 3.561725 | GCTAGGCAGACAAGCGAAAATAT | 59.438 | 43.478 | 0.00 | 0.00 | 34.64 | 1.28 |
45 | 46 | 1.513622 | TCGGTGATCGAAATCCGCA | 59.486 | 52.632 | 16.75 | 6.96 | 45.86 | 5.69 |
144 | 153 | 2.673368 | GACTTGATACCGCAACAAGAGG | 59.327 | 50.000 | 12.04 | 0.00 | 42.12 | 3.69 |
199 | 208 | 8.462016 | CCTCGAAAAGAAATTTCAGAACCATAT | 58.538 | 33.333 | 19.99 | 0.00 | 46.42 | 1.78 |
221 | 230 | 2.841442 | AAAGAGACCAAGTTCCCTCG | 57.159 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
310 | 321 | 1.538512 | GGTCGATATGCGTGGCTACTA | 59.461 | 52.381 | 0.00 | 0.00 | 41.80 | 1.82 |
311 | 322 | 0.314302 | GGTCGATATGCGTGGCTACT | 59.686 | 55.000 | 0.00 | 0.00 | 41.80 | 2.57 |
312 | 323 | 0.031585 | TGGTCGATATGCGTGGCTAC | 59.968 | 55.000 | 0.00 | 0.00 | 41.80 | 3.58 |
313 | 324 | 0.031585 | GTGGTCGATATGCGTGGCTA | 59.968 | 55.000 | 0.00 | 0.00 | 41.80 | 3.93 |
314 | 325 | 1.227263 | GTGGTCGATATGCGTGGCT | 60.227 | 57.895 | 0.00 | 0.00 | 41.80 | 4.75 |
315 | 326 | 2.585869 | CGTGGTCGATATGCGTGGC | 61.586 | 63.158 | 0.00 | 0.00 | 41.80 | 5.01 |
316 | 327 | 1.065109 | TCGTGGTCGATATGCGTGG | 59.935 | 57.895 | 0.00 | 0.00 | 41.35 | 4.94 |
317 | 328 | 4.702020 | TCGTGGTCGATATGCGTG | 57.298 | 55.556 | 0.00 | 0.00 | 41.35 | 5.34 |
337 | 348 | 4.584743 | TGTGCTACAGTAGTCATATCCCTG | 59.415 | 45.833 | 9.42 | 0.00 | 0.00 | 4.45 |
362 | 373 | 5.967806 | CCGAAAAGGAGGGATACACATCCT | 61.968 | 50.000 | 3.79 | 0.00 | 46.01 | 3.24 |
364 | 375 | 3.118371 | ACCGAAAAGGAGGGATACACATC | 60.118 | 47.826 | 0.00 | 0.00 | 45.00 | 3.06 |
365 | 376 | 2.844348 | ACCGAAAAGGAGGGATACACAT | 59.156 | 45.455 | 0.00 | 0.00 | 45.00 | 3.21 |
367 | 378 | 3.345508 | AACCGAAAAGGAGGGATACAC | 57.654 | 47.619 | 0.00 | 0.00 | 45.00 | 2.90 |
369 | 380 | 6.709397 | CCTTATAAACCGAAAAGGAGGGATAC | 59.291 | 42.308 | 0.00 | 0.00 | 45.00 | 2.24 |
372 | 383 | 4.627013 | GCCTTATAAACCGAAAAGGAGGGA | 60.627 | 45.833 | 4.19 | 0.00 | 45.00 | 4.20 |
373 | 384 | 3.630769 | GCCTTATAAACCGAAAAGGAGGG | 59.369 | 47.826 | 4.19 | 0.00 | 45.00 | 4.30 |
374 | 385 | 4.524053 | AGCCTTATAAACCGAAAAGGAGG | 58.476 | 43.478 | 4.19 | 0.00 | 45.00 | 4.30 |
375 | 386 | 7.715686 | AGATAAGCCTTATAAACCGAAAAGGAG | 59.284 | 37.037 | 0.00 | 0.00 | 45.00 | 3.69 |
376 | 387 | 7.571025 | AGATAAGCCTTATAAACCGAAAAGGA | 58.429 | 34.615 | 0.00 | 0.00 | 45.00 | 3.36 |
381 | 1939 | 8.795842 | TTTTGAGATAAGCCTTATAAACCGAA | 57.204 | 30.769 | 0.00 | 0.00 | 0.00 | 4.30 |
429 | 1987 | 8.928448 | ACACTAGTCCAATGACAACATATATCT | 58.072 | 33.333 | 0.00 | 0.00 | 44.33 | 1.98 |
430 | 1988 | 9.547753 | AACACTAGTCCAATGACAACATATATC | 57.452 | 33.333 | 0.00 | 0.00 | 44.33 | 1.63 |
431 | 1989 | 9.905713 | AAACACTAGTCCAATGACAACATATAT | 57.094 | 29.630 | 0.00 | 0.00 | 44.33 | 0.86 |
445 | 3130 | 4.495565 | TCCTTTCCCTAAACACTAGTCCA | 58.504 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
450 | 3135 | 6.472887 | CATGTTCTCCTTTCCCTAAACACTA | 58.527 | 40.000 | 0.00 | 0.00 | 30.26 | 2.74 |
455 | 3140 | 4.589908 | GAGCATGTTCTCCTTTCCCTAAA | 58.410 | 43.478 | 1.76 | 0.00 | 0.00 | 1.85 |
456 | 3141 | 3.369471 | CGAGCATGTTCTCCTTTCCCTAA | 60.369 | 47.826 | 8.01 | 0.00 | 0.00 | 2.69 |
479 | 3164 | 1.500108 | CGGTGCTTGTACAACGGTAA | 58.500 | 50.000 | 3.59 | 0.00 | 46.85 | 2.85 |
481 | 3166 | 4.036977 | CGGTGCTTGTACAACGGT | 57.963 | 55.556 | 3.59 | 0.00 | 46.85 | 4.83 |
485 | 3170 | 1.004320 | ATCCGCGGTGCTTGTACAA | 60.004 | 52.632 | 27.15 | 8.28 | 0.00 | 2.41 |
559 | 3244 | 4.885270 | TGGTGTTGGCGTGTGGGG | 62.885 | 66.667 | 0.00 | 0.00 | 0.00 | 4.96 |
596 | 3281 | 0.827507 | ACCTGCCCCATGTGTTTGTC | 60.828 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
597 | 3282 | 0.480690 | TACCTGCCCCATGTGTTTGT | 59.519 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
598 | 3283 | 0.887933 | GTACCTGCCCCATGTGTTTG | 59.112 | 55.000 | 0.00 | 0.00 | 0.00 | 2.93 |
671 | 3359 | 1.121378 | GGAGAACCCTAGCCTACACC | 58.879 | 60.000 | 0.00 | 0.00 | 0.00 | 4.16 |
688 | 3381 | 0.392461 | GCACAAGCGATAAGGGTGGA | 60.392 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
723 | 3418 | 8.963725 | TCATCAATCTGACTTGCTAAAATTGAT | 58.036 | 29.630 | 0.00 | 0.00 | 40.91 | 2.57 |
725 | 3420 | 8.857216 | GTTCATCAATCTGACTTGCTAAAATTG | 58.143 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
763 | 3458 | 8.630037 | ACCTAAAAGACGTTCATCAATCTTTTT | 58.370 | 29.630 | 14.08 | 0.00 | 44.87 | 1.94 |
765 | 3460 | 7.444183 | TCACCTAAAAGACGTTCATCAATCTTT | 59.556 | 33.333 | 0.00 | 0.00 | 41.92 | 2.52 |
766 | 3461 | 6.934645 | TCACCTAAAAGACGTTCATCAATCTT | 59.065 | 34.615 | 0.00 | 0.00 | 32.78 | 2.40 |
767 | 3462 | 6.464222 | TCACCTAAAAGACGTTCATCAATCT | 58.536 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
768 | 3463 | 6.721571 | TCACCTAAAAGACGTTCATCAATC | 57.278 | 37.500 | 0.00 | 0.00 | 0.00 | 2.67 |
769 | 3464 | 7.687941 | AATCACCTAAAAGACGTTCATCAAT | 57.312 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
770 | 3465 | 7.504924 | AAATCACCTAAAAGACGTTCATCAA | 57.495 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
771 | 3466 | 7.118680 | GGTAAATCACCTAAAAGACGTTCATCA | 59.881 | 37.037 | 0.00 | 0.00 | 44.79 | 3.07 |
772 | 3467 | 7.461918 | GGTAAATCACCTAAAAGACGTTCATC | 58.538 | 38.462 | 0.00 | 0.00 | 44.79 | 2.92 |
773 | 3468 | 7.373778 | GGTAAATCACCTAAAAGACGTTCAT | 57.626 | 36.000 | 0.00 | 0.00 | 44.79 | 2.57 |
774 | 3469 | 6.790285 | GGTAAATCACCTAAAAGACGTTCA | 57.210 | 37.500 | 0.00 | 0.00 | 44.79 | 3.18 |
806 | 3585 | 3.047796 | GCAGACTGCAAATTCACTTGTG | 58.952 | 45.455 | 22.62 | 0.00 | 44.26 | 3.33 |
822 | 3601 | 2.489722 | GAGGACAATCCCTTTTGCAGAC | 59.510 | 50.000 | 0.00 | 0.00 | 37.19 | 3.51 |
870 | 3734 | 2.097466 | ACTCGTGAAGTTTTTGCCACTG | 59.903 | 45.455 | 0.00 | 0.00 | 33.03 | 3.66 |
897 | 3761 | 2.474410 | AGAGTACTTTTCTTGGCCCG | 57.526 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
1353 | 4252 | 1.265095 | CTGCGCAGAGACACACAAAAT | 59.735 | 47.619 | 33.66 | 0.00 | 0.00 | 1.82 |
1358 | 4257 | 3.418068 | GCCTGCGCAGAGACACAC | 61.418 | 66.667 | 38.06 | 13.93 | 34.03 | 3.82 |
1360 | 4259 | 3.117171 | CAGCCTGCGCAGAGACAC | 61.117 | 66.667 | 38.06 | 20.29 | 37.52 | 3.67 |
1362 | 4261 | 2.358003 | AACAGCCTGCGCAGAGAC | 60.358 | 61.111 | 38.06 | 25.17 | 37.52 | 3.36 |
1363 | 4262 | 2.047844 | GAACAGCCTGCGCAGAGA | 60.048 | 61.111 | 38.06 | 0.91 | 37.52 | 3.10 |
1364 | 4263 | 3.485431 | CGAACAGCCTGCGCAGAG | 61.485 | 66.667 | 38.06 | 26.98 | 37.52 | 3.35 |
1572 | 4475 | 0.890996 | GCCGGGCAATAGATTCCAGG | 60.891 | 60.000 | 15.62 | 0.00 | 38.11 | 4.45 |
1596 | 4499 | 3.521727 | ACAAATCACTCTAGGGTCAGGT | 58.478 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
1602 | 4505 | 4.160439 | TGTGAGCTACAAATCACTCTAGGG | 59.840 | 45.833 | 6.85 | 0.00 | 44.90 | 3.53 |
1635 | 4538 | 4.533222 | CGTTCTCCAACACCAATTGTAAC | 58.467 | 43.478 | 4.43 | 0.00 | 37.51 | 2.50 |
1679 | 4592 | 4.807304 | TCTGTCTGTACAACTTTTCGTTCC | 59.193 | 41.667 | 0.00 | 0.00 | 34.49 | 3.62 |
1683 | 4596 | 8.636843 | GTTATACTCTGTCTGTACAACTTTTCG | 58.363 | 37.037 | 0.00 | 0.00 | 34.49 | 3.46 |
1834 | 4747 | 7.222999 | CCGCAAGAGTAAAAGAGATTAACCTAG | 59.777 | 40.741 | 0.00 | 0.00 | 43.02 | 3.02 |
1935 | 4848 | 1.527034 | TCACTTGATGCCTGCTTGAC | 58.473 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2049 | 4962 | 6.986817 | ACAAGTAATATGGATCGAAGGAAGTG | 59.013 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
2053 | 4966 | 5.769367 | CGACAAGTAATATGGATCGAAGGA | 58.231 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
2057 | 4970 | 4.277423 | TGAGCGACAAGTAATATGGATCGA | 59.723 | 41.667 | 0.00 | 0.00 | 0.00 | 3.59 |
2115 | 5028 | 1.901650 | CTTGTCGCTCAAACGGAGGC | 61.902 | 60.000 | 0.00 | 0.00 | 44.22 | 4.70 |
2164 | 5077 | 8.038944 | TGTAAAAGATACATTCAGGGTCAGTAC | 58.961 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
2171 | 5084 | 7.056635 | AGATGGTGTAAAAGATACATTCAGGG | 58.943 | 38.462 | 0.00 | 0.00 | 0.00 | 4.45 |
2188 | 5101 | 4.385825 | TCGTTTTTAGCTGAAGATGGTGT | 58.614 | 39.130 | 0.00 | 0.00 | 0.00 | 4.16 |
2229 | 5142 | 1.603171 | ATGGCGTTGGTGTGCATCA | 60.603 | 52.632 | 0.00 | 0.00 | 0.00 | 3.07 |
2242 | 5155 | 1.154093 | CTGTGCTGCTTTCATGGCG | 60.154 | 57.895 | 0.00 | 0.00 | 0.00 | 5.69 |
2327 | 5240 | 7.559486 | AGCAGAACAGACAGACATAATAATCA | 58.441 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
2332 | 5245 | 7.790027 | AGAATAGCAGAACAGACAGACATAAT | 58.210 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
2333 | 5246 | 7.123397 | AGAGAATAGCAGAACAGACAGACATAA | 59.877 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
2334 | 5247 | 6.605194 | AGAGAATAGCAGAACAGACAGACATA | 59.395 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
2375 | 5288 | 0.668401 | GCCATCTGCCACAAAAGTGC | 60.668 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2413 | 5326 | 0.318107 | CAGCTTTGGACTGCCGTTTG | 60.318 | 55.000 | 0.00 | 0.00 | 36.79 | 2.93 |
2419 | 5332 | 2.338140 | GCTTTACAGCTTTGGACTGC | 57.662 | 50.000 | 0.00 | 0.00 | 43.51 | 4.40 |
2478 | 5391 | 4.504858 | AGTCAGTAAAATAGCCAAGACCG | 58.495 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
2486 | 5399 | 9.516314 | AAGAAAACACAAAGTCAGTAAAATAGC | 57.484 | 29.630 | 0.00 | 0.00 | 0.00 | 2.97 |
2489 | 5402 | 8.749354 | AGGAAGAAAACACAAAGTCAGTAAAAT | 58.251 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
2495 | 5408 | 5.567138 | ACAGGAAGAAAACACAAAGTCAG | 57.433 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
2498 | 5411 | 8.691661 | ACATATACAGGAAGAAAACACAAAGT | 57.308 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
2516 | 5429 | 9.307121 | AGCAGCGATCTCAAAATATACATATAC | 57.693 | 33.333 | 0.00 | 0.00 | 0.00 | 1.47 |
2611 | 5524 | 6.789262 | ACATATAAAGCTGCTGTGTGAAATC | 58.211 | 36.000 | 1.35 | 0.00 | 0.00 | 2.17 |
2696 | 5611 | 6.668645 | TGGTAACTCAGGTGGCATTAATATT | 58.331 | 36.000 | 0.00 | 0.00 | 37.61 | 1.28 |
2707 | 5622 | 4.122776 | GTCTATGCATGGTAACTCAGGTG | 58.877 | 47.826 | 10.16 | 0.00 | 37.61 | 4.00 |
2714 | 5629 | 6.683974 | AAATCTGTGTCTATGCATGGTAAC | 57.316 | 37.500 | 10.16 | 9.88 | 0.00 | 2.50 |
2795 | 5710 | 1.816835 | ACATCGTACGGATCACTGTGT | 59.183 | 47.619 | 16.52 | 5.26 | 36.89 | 3.72 |
2922 | 5838 | 9.739276 | ATTTGGAGACTAAATATCAGAACAACA | 57.261 | 29.630 | 0.00 | 0.00 | 0.00 | 3.33 |
2939 | 5855 | 7.226918 | GCTAGGTAAATAGGTGAATTTGGAGAC | 59.773 | 40.741 | 0.00 | 0.00 | 31.63 | 3.36 |
2940 | 5856 | 7.127339 | AGCTAGGTAAATAGGTGAATTTGGAGA | 59.873 | 37.037 | 0.00 | 0.00 | 32.42 | 3.71 |
2941 | 5857 | 7.283329 | AGCTAGGTAAATAGGTGAATTTGGAG | 58.717 | 38.462 | 0.00 | 0.00 | 32.42 | 3.86 |
2955 | 5872 | 5.187967 | AGAGCAGTGTTACAGCTAGGTAAAT | 59.812 | 40.000 | 0.00 | 0.00 | 41.18 | 1.40 |
3012 | 5931 | 9.675464 | TTTACTTAGGACCATGAATCGTAAAAT | 57.325 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
3018 | 5937 | 6.038161 | TGCAATTTACTTAGGACCATGAATCG | 59.962 | 38.462 | 0.00 | 0.00 | 0.00 | 3.34 |
3030 | 5949 | 3.869065 | TCGGAGGGTGCAATTTACTTAG | 58.131 | 45.455 | 0.00 | 0.00 | 0.00 | 2.18 |
3048 | 5967 | 8.979574 | GGTATTTACAAGATTAGACAGAATCGG | 58.020 | 37.037 | 0.00 | 0.00 | 40.20 | 4.18 |
3140 | 6096 | 9.470399 | TCAACTGTTAGACTCCATATGTAACTA | 57.530 | 33.333 | 12.00 | 4.36 | 0.00 | 2.24 |
3197 | 6161 | 7.568349 | TGGCCCAATAAAACAATATTGCAATA | 58.432 | 30.769 | 20.95 | 20.95 | 40.41 | 1.90 |
3198 | 6162 | 6.421485 | TGGCCCAATAAAACAATATTGCAAT | 58.579 | 32.000 | 17.56 | 17.56 | 40.41 | 3.56 |
3200 | 6164 | 5.188555 | TCTGGCCCAATAAAACAATATTGCA | 59.811 | 36.000 | 15.48 | 0.00 | 40.41 | 4.08 |
3201 | 6165 | 5.669477 | TCTGGCCCAATAAAACAATATTGC | 58.331 | 37.500 | 15.48 | 0.00 | 40.41 | 3.56 |
3202 | 6166 | 8.859090 | TCTATCTGGCCCAATAAAACAATATTG | 58.141 | 33.333 | 14.01 | 14.01 | 41.08 | 1.90 |
3209 | 6175 | 6.715347 | ACAATCTATCTGGCCCAATAAAAC | 57.285 | 37.500 | 0.00 | 0.00 | 0.00 | 2.43 |
3221 | 6187 | 6.035435 | CAGACCGTTCTCAAACAATCTATCTG | 59.965 | 42.308 | 0.00 | 0.00 | 34.93 | 2.90 |
3225 | 6191 | 3.994392 | GCAGACCGTTCTCAAACAATCTA | 59.006 | 43.478 | 0.00 | 0.00 | 34.93 | 1.98 |
3241 | 6207 | 4.097741 | TGCACATGGTATTATTTGCAGACC | 59.902 | 41.667 | 0.00 | 0.00 | 38.44 | 3.85 |
3244 | 6210 | 6.018588 | CCAAATGCACATGGTATTATTTGCAG | 60.019 | 38.462 | 10.75 | 0.00 | 44.19 | 4.41 |
3257 | 6223 | 4.562082 | ACATTCAGAACCAAATGCACATG | 58.438 | 39.130 | 0.00 | 0.00 | 36.54 | 3.21 |
3258 | 6224 | 4.877378 | ACATTCAGAACCAAATGCACAT | 57.123 | 36.364 | 0.00 | 0.00 | 36.54 | 3.21 |
3286 | 6252 | 9.503427 | GTACCTGTCACAATAAGAAAATTATGC | 57.497 | 33.333 | 0.00 | 0.00 | 0.00 | 3.14 |
3299 | 6265 | 3.485394 | TGCAACATGTACCTGTCACAAT | 58.515 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
3389 | 6355 | 7.573710 | ACAATAGATTAAGGGCACATAGTTGA | 58.426 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
3401 | 6367 | 8.388484 | AGCAAGCTTATGACAATAGATTAAGG | 57.612 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
3410 | 6376 | 5.709164 | ACTTCAAGAGCAAGCTTATGACAAT | 59.291 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
3456 | 6425 | 1.338973 | CCGCCAGGATTGAATGATTGG | 59.661 | 52.381 | 0.00 | 0.00 | 41.02 | 3.16 |
3473 | 6442 | 8.395633 | ACATAGAAGTTTATATTGTTTGACCGC | 58.604 | 33.333 | 0.00 | 0.00 | 0.00 | 5.68 |
3497 | 6466 | 0.337428 | GGGGTGGAGGGAGTACTACA | 59.663 | 60.000 | 7.57 | 0.00 | 0.00 | 2.74 |
3504 | 6473 | 0.468648 | GTAATTCGGGGTGGAGGGAG | 59.531 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3505 | 6474 | 0.043637 | AGTAATTCGGGGTGGAGGGA | 59.956 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
3506 | 6475 | 0.916809 | AAGTAATTCGGGGTGGAGGG | 59.083 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3507 | 6476 | 1.280998 | ACAAGTAATTCGGGGTGGAGG | 59.719 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
3508 | 6477 | 2.629051 | GACAAGTAATTCGGGGTGGAG | 58.371 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
3509 | 6478 | 1.066716 | CGACAAGTAATTCGGGGTGGA | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
3510 | 6479 | 1.365699 | CGACAAGTAATTCGGGGTGG | 58.634 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3513 | 6482 | 1.006832 | CTGCGACAAGTAATTCGGGG | 58.993 | 55.000 | 0.00 | 0.00 | 35.73 | 5.73 |
3515 | 6484 | 4.334443 | CATTTCTGCGACAAGTAATTCGG | 58.666 | 43.478 | 0.00 | 0.00 | 35.73 | 4.30 |
3516 | 6485 | 3.780801 | GCATTTCTGCGACAAGTAATTCG | 59.219 | 43.478 | 0.00 | 0.00 | 38.92 | 3.34 |
3556 | 6525 | 9.547753 | GCAGAAATGGATGTATCTAGAACTAAA | 57.452 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
3557 | 6526 | 7.867909 | CGCAGAAATGGATGTATCTAGAACTAA | 59.132 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
3558 | 6527 | 7.230712 | TCGCAGAAATGGATGTATCTAGAACTA | 59.769 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
3559 | 6528 | 6.040955 | TCGCAGAAATGGATGTATCTAGAACT | 59.959 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
3560 | 6529 | 6.144724 | GTCGCAGAAATGGATGTATCTAGAAC | 59.855 | 42.308 | 0.00 | 0.00 | 39.69 | 3.01 |
3561 | 6530 | 6.183360 | TGTCGCAGAAATGGATGTATCTAGAA | 60.183 | 38.462 | 0.00 | 0.00 | 39.69 | 2.10 |
3562 | 6531 | 5.301805 | TGTCGCAGAAATGGATGTATCTAGA | 59.698 | 40.000 | 0.00 | 0.00 | 39.69 | 2.43 |
3563 | 6532 | 5.532557 | TGTCGCAGAAATGGATGTATCTAG | 58.467 | 41.667 | 0.00 | 0.00 | 39.69 | 2.43 |
3564 | 6533 | 5.529581 | TGTCGCAGAAATGGATGTATCTA | 57.470 | 39.130 | 0.00 | 0.00 | 39.69 | 1.98 |
3565 | 6534 | 4.406648 | TGTCGCAGAAATGGATGTATCT | 57.593 | 40.909 | 0.00 | 0.00 | 39.69 | 1.98 |
3566 | 6535 | 4.572389 | ACTTGTCGCAGAAATGGATGTATC | 59.428 | 41.667 | 0.00 | 0.00 | 39.69 | 2.24 |
3567 | 6536 | 4.517285 | ACTTGTCGCAGAAATGGATGTAT | 58.483 | 39.130 | 0.00 | 0.00 | 39.69 | 2.29 |
3568 | 6537 | 3.937814 | ACTTGTCGCAGAAATGGATGTA | 58.062 | 40.909 | 0.00 | 0.00 | 39.69 | 2.29 |
3569 | 6538 | 2.783135 | ACTTGTCGCAGAAATGGATGT | 58.217 | 42.857 | 0.00 | 0.00 | 39.69 | 3.06 |
3570 | 6539 | 4.944962 | TTACTTGTCGCAGAAATGGATG | 57.055 | 40.909 | 0.00 | 0.00 | 39.69 | 3.51 |
3571 | 6540 | 5.647658 | TGAATTACTTGTCGCAGAAATGGAT | 59.352 | 36.000 | 0.00 | 0.00 | 39.69 | 3.41 |
3572 | 6541 | 5.000591 | TGAATTACTTGTCGCAGAAATGGA | 58.999 | 37.500 | 0.00 | 0.00 | 39.69 | 3.41 |
3573 | 6542 | 5.295431 | TGAATTACTTGTCGCAGAAATGG | 57.705 | 39.130 | 0.00 | 0.00 | 39.69 | 3.16 |
3574 | 6543 | 6.602179 | TCTTGAATTACTTGTCGCAGAAATG | 58.398 | 36.000 | 0.00 | 0.00 | 39.69 | 2.32 |
3575 | 6544 | 6.801539 | TCTTGAATTACTTGTCGCAGAAAT | 57.198 | 33.333 | 0.00 | 0.00 | 39.69 | 2.17 |
3576 | 6545 | 6.348458 | CCATCTTGAATTACTTGTCGCAGAAA | 60.348 | 38.462 | 0.00 | 0.00 | 39.69 | 2.52 |
3577 | 6546 | 5.122239 | CCATCTTGAATTACTTGTCGCAGAA | 59.878 | 40.000 | 0.00 | 0.00 | 39.69 | 3.02 |
3578 | 6547 | 4.631377 | CCATCTTGAATTACTTGTCGCAGA | 59.369 | 41.667 | 0.00 | 0.00 | 0.00 | 4.26 |
3579 | 6548 | 4.631377 | TCCATCTTGAATTACTTGTCGCAG | 59.369 | 41.667 | 0.00 | 0.00 | 0.00 | 5.18 |
3580 | 6549 | 4.574892 | TCCATCTTGAATTACTTGTCGCA | 58.425 | 39.130 | 0.00 | 0.00 | 0.00 | 5.10 |
3581 | 6550 | 4.034510 | CCTCCATCTTGAATTACTTGTCGC | 59.965 | 45.833 | 0.00 | 0.00 | 0.00 | 5.19 |
3582 | 6551 | 4.572389 | CCCTCCATCTTGAATTACTTGTCG | 59.428 | 45.833 | 0.00 | 0.00 | 0.00 | 4.35 |
3583 | 6552 | 5.745227 | TCCCTCCATCTTGAATTACTTGTC | 58.255 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
3584 | 6553 | 5.251700 | ACTCCCTCCATCTTGAATTACTTGT | 59.748 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3585 | 6554 | 5.749462 | ACTCCCTCCATCTTGAATTACTTG | 58.251 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
3586 | 6555 | 7.348274 | TCATACTCCCTCCATCTTGAATTACTT | 59.652 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
3587 | 6556 | 6.846505 | TCATACTCCCTCCATCTTGAATTACT | 59.153 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
3588 | 6557 | 7.067496 | TCATACTCCCTCCATCTTGAATTAC | 57.933 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
3589 | 6558 | 7.690454 | TTCATACTCCCTCCATCTTGAATTA | 57.310 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3590 | 6559 | 6.581388 | TTCATACTCCCTCCATCTTGAATT | 57.419 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
3591 | 6560 | 6.776887 | ATTCATACTCCCTCCATCTTGAAT | 57.223 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
3592 | 6561 | 7.690454 | TTATTCATACTCCCTCCATCTTGAA | 57.310 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
3593 | 6562 | 7.878621 | ATTATTCATACTCCCTCCATCTTGA | 57.121 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3596 | 6565 | 9.343994 | ACATTATTATTCATACTCCCTCCATCT | 57.656 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
3597 | 6566 | 9.606631 | GACATTATTATTCATACTCCCTCCATC | 57.393 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
3598 | 6567 | 9.116080 | TGACATTATTATTCATACTCCCTCCAT | 57.884 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
3599 | 6568 | 8.504811 | TGACATTATTATTCATACTCCCTCCA | 57.495 | 34.615 | 0.00 | 0.00 | 0.00 | 3.86 |
3600 | 6569 | 9.965902 | AATGACATTATTATTCATACTCCCTCC | 57.034 | 33.333 | 0.00 | 0.00 | 29.64 | 4.30 |
3631 | 6600 | 8.836268 | TCGACAAAATAACTACATTTACAGGT | 57.164 | 30.769 | 0.00 | 0.00 | 0.00 | 4.00 |
3682 | 6653 | 7.646314 | TGTATAAGGTTCTACGCTAAGCTTAG | 58.354 | 38.462 | 26.20 | 26.20 | 45.11 | 2.18 |
3688 | 6659 | 8.681486 | TGACTATGTATAAGGTTCTACGCTAA | 57.319 | 34.615 | 0.00 | 0.00 | 0.00 | 3.09 |
3689 | 6660 | 7.094890 | GCTGACTATGTATAAGGTTCTACGCTA | 60.095 | 40.741 | 0.00 | 0.00 | 0.00 | 4.26 |
3717 | 6688 | 3.073678 | CAAATGACACATGAAGGACCGA | 58.926 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
3718 | 6689 | 2.813754 | ACAAATGACACATGAAGGACCG | 59.186 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
3719 | 6690 | 5.677091 | GCATACAAATGACACATGAAGGACC | 60.677 | 44.000 | 0.00 | 0.00 | 34.84 | 4.46 |
3720 | 6691 | 5.106197 | TGCATACAAATGACACATGAAGGAC | 60.106 | 40.000 | 0.00 | 0.00 | 34.84 | 3.85 |
3767 | 6742 | 9.578576 | TGCTATTAGAAATCCAATCAAGCTTAT | 57.421 | 29.630 | 0.00 | 0.00 | 0.00 | 1.73 |
3773 | 6748 | 8.985315 | ACTCATGCTATTAGAAATCCAATCAA | 57.015 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
3776 | 6751 | 8.159447 | TGCTACTCATGCTATTAGAAATCCAAT | 58.841 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
3779 | 6754 | 6.091986 | GCTGCTACTCATGCTATTAGAAATCC | 59.908 | 42.308 | 0.00 | 0.00 | 0.00 | 3.01 |
3803 | 6778 | 5.105063 | GGAAAACCAATAGAAAGCTCATGC | 58.895 | 41.667 | 0.00 | 0.00 | 40.05 | 4.06 |
3823 | 6798 | 0.948678 | GCCGCACAAAGTTACTGGAA | 59.051 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3866 | 6841 | 0.108138 | CACGGGAACAGGAAGCCTAG | 60.108 | 60.000 | 0.00 | 0.00 | 29.64 | 3.02 |
3875 | 6850 | 1.369091 | GCTGCCATACACGGGAACAG | 61.369 | 60.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3881 | 6856 | 2.011741 | TACTCCGCTGCCATACACGG | 62.012 | 60.000 | 0.00 | 0.00 | 41.45 | 4.94 |
3905 | 6880 | 0.605319 | GGGATTGTCGTGTGCTCCAA | 60.605 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3932 | 6907 | 2.708861 | TGTGGCCTTTTCCTTGAGAGTA | 59.291 | 45.455 | 3.32 | 0.00 | 0.00 | 2.59 |
3933 | 6908 | 1.494721 | TGTGGCCTTTTCCTTGAGAGT | 59.505 | 47.619 | 3.32 | 0.00 | 0.00 | 3.24 |
3936 | 6911 | 4.530875 | AGATATGTGGCCTTTTCCTTGAG | 58.469 | 43.478 | 3.32 | 0.00 | 0.00 | 3.02 |
3942 | 6917 | 4.775236 | AGACAGAGATATGTGGCCTTTTC | 58.225 | 43.478 | 3.32 | 0.00 | 32.25 | 2.29 |
3950 | 6925 | 7.993821 | AATGTTAACGAGACAGAGATATGTG | 57.006 | 36.000 | 0.26 | 0.00 | 32.25 | 3.21 |
4040 | 7018 | 4.628333 | CCAACAGAGCAATTATTTTGCCTG | 59.372 | 41.667 | 18.64 | 18.64 | 45.98 | 4.85 |
4055 | 7033 | 2.813754 | TGAATTTTCCTCGCCAACAGAG | 59.186 | 45.455 | 0.00 | 0.00 | 35.60 | 3.35 |
4064 | 7042 | 5.182001 | ACTTTCTGTCCATGAATTTTCCTCG | 59.818 | 40.000 | 0.00 | 0.00 | 0.00 | 4.63 |
4295 | 7273 | 4.496507 | GCATCGAAAGTAGAAAGATTGGGC | 60.497 | 45.833 | 0.00 | 0.00 | 0.00 | 5.36 |
4442 | 7420 | 1.475280 | TGGAAGATAGTACGCGCTGTT | 59.525 | 47.619 | 5.73 | 0.00 | 0.00 | 3.16 |
4466 | 7444 | 9.321562 | AGAATATAATTTGCAAATTTGAGCAGG | 57.678 | 29.630 | 35.18 | 0.00 | 42.39 | 4.85 |
4492 | 7470 | 5.168569 | CCAGCAGTTGTAAGAAAGATACGA | 58.831 | 41.667 | 0.00 | 0.00 | 0.00 | 3.43 |
4493 | 7471 | 4.330074 | CCCAGCAGTTGTAAGAAAGATACG | 59.670 | 45.833 | 0.00 | 0.00 | 0.00 | 3.06 |
4501 | 7479 | 3.788227 | ACATTCCCAGCAGTTGTAAGA | 57.212 | 42.857 | 0.00 | 0.00 | 0.00 | 2.10 |
4525 | 7503 | 7.987268 | CAAATAGTGCTACGACATCTTTAGA | 57.013 | 36.000 | 0.00 | 0.00 | 0.00 | 2.10 |
4549 | 7527 | 6.280643 | CCCCTTTAAACAGGCTTTTATATGC | 58.719 | 40.000 | 0.00 | 0.00 | 31.69 | 3.14 |
4550 | 7528 | 6.685368 | GCCCCCTTTAAACAGGCTTTTATATG | 60.685 | 42.308 | 9.96 | 0.00 | 40.57 | 1.78 |
4551 | 7529 | 5.365605 | GCCCCCTTTAAACAGGCTTTTATAT | 59.634 | 40.000 | 9.96 | 0.00 | 40.57 | 0.86 |
4552 | 7530 | 4.712829 | GCCCCCTTTAAACAGGCTTTTATA | 59.287 | 41.667 | 9.96 | 0.00 | 40.57 | 0.98 |
4694 | 7677 | 1.081906 | GTGCGTGCTGTCCAACATG | 60.082 | 57.895 | 0.00 | 0.00 | 0.00 | 3.21 |
4822 | 7807 | 3.024547 | CGAGTTCAGGAGGAGGTTATCA | 58.975 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
5038 | 8023 | 3.609409 | GCTTCTTGCGGTGTTCTAAAAGG | 60.609 | 47.826 | 0.00 | 0.00 | 0.00 | 3.11 |
5074 | 8059 | 3.072038 | TGATCAGACATCCATCCATCCAC | 59.928 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
5076 | 8061 | 4.571369 | ATGATCAGACATCCATCCATCC | 57.429 | 45.455 | 0.09 | 0.00 | 0.00 | 3.51 |
5117 | 8112 | 6.044871 | AGGCCATGGTTAGCTTTCTTCTATAT | 59.955 | 38.462 | 14.67 | 0.00 | 0.00 | 0.86 |
5229 | 8228 | 9.751542 | GCCAGTAAATGCTATATATACAGGTAG | 57.248 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
5230 | 8229 | 9.262240 | TGCCAGTAAATGCTATATATACAGGTA | 57.738 | 33.333 | 0.00 | 0.00 | 0.00 | 3.08 |
5291 | 8314 | 5.120830 | GGTACAGCAACATAGTCTTCAACTG | 59.879 | 44.000 | 0.00 | 0.00 | 39.11 | 3.16 |
5293 | 8316 | 5.238583 | AGGTACAGCAACATAGTCTTCAAC | 58.761 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
5324 | 8349 | 9.793252 | ATAATTACTTTACTTTGCAGATGCTTG | 57.207 | 29.630 | 6.35 | 0.00 | 42.66 | 4.01 |
5346 | 8374 | 4.812091 | TCCGCAAGCAAATACGTACATAAT | 59.188 | 37.500 | 0.00 | 0.00 | 0.00 | 1.28 |
5347 | 8375 | 4.182339 | TCCGCAAGCAAATACGTACATAA | 58.818 | 39.130 | 0.00 | 0.00 | 0.00 | 1.90 |
5348 | 8376 | 3.783191 | TCCGCAAGCAAATACGTACATA | 58.217 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
5349 | 8377 | 2.623535 | TCCGCAAGCAAATACGTACAT | 58.376 | 42.857 | 0.00 | 0.00 | 0.00 | 2.29 |
5354 | 8382 | 2.241722 | CACTTTCCGCAAGCAAATACG | 58.758 | 47.619 | 0.00 | 0.00 | 35.65 | 3.06 |
5355 | 8383 | 3.282831 | ACACTTTCCGCAAGCAAATAC | 57.717 | 42.857 | 0.00 | 0.00 | 35.65 | 1.89 |
5365 | 8393 | 4.217754 | TGATGTTGTTAACACTTTCCGC | 57.782 | 40.909 | 8.07 | 0.00 | 45.50 | 5.54 |
5367 | 8395 | 4.923281 | GGCATGATGTTGTTAACACTTTCC | 59.077 | 41.667 | 8.07 | 0.00 | 45.50 | 3.13 |
5380 | 8409 | 7.493320 | GTCATTTATCAACATTGGCATGATGTT | 59.507 | 33.333 | 10.92 | 10.92 | 45.80 | 2.71 |
5399 | 8428 | 8.313292 | CCATTTTCCAAATCTTCAGGTCATTTA | 58.687 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
5421 | 8451 | 7.707624 | TGCAGAAACTCATAAGAAATCCATT | 57.292 | 32.000 | 0.00 | 0.00 | 0.00 | 3.16 |
5429 | 8459 | 8.023128 | GCATAACTTTTGCAGAAACTCATAAGA | 58.977 | 33.333 | 0.00 | 0.00 | 39.90 | 2.10 |
5430 | 8460 | 7.274250 | GGCATAACTTTTGCAGAAACTCATAAG | 59.726 | 37.037 | 6.55 | 0.00 | 41.95 | 1.73 |
5431 | 8461 | 7.090173 | GGCATAACTTTTGCAGAAACTCATAA | 58.910 | 34.615 | 6.55 | 0.00 | 41.95 | 1.90 |
5432 | 8462 | 6.208402 | TGGCATAACTTTTGCAGAAACTCATA | 59.792 | 34.615 | 6.55 | 0.00 | 41.95 | 2.15 |
5433 | 8463 | 5.010922 | TGGCATAACTTTTGCAGAAACTCAT | 59.989 | 36.000 | 6.55 | 0.00 | 41.95 | 2.90 |
5434 | 8464 | 4.340666 | TGGCATAACTTTTGCAGAAACTCA | 59.659 | 37.500 | 6.55 | 0.00 | 41.95 | 3.41 |
5435 | 8465 | 4.870363 | TGGCATAACTTTTGCAGAAACTC | 58.130 | 39.130 | 6.55 | 0.00 | 41.95 | 3.01 |
5436 | 8466 | 4.935352 | TGGCATAACTTTTGCAGAAACT | 57.065 | 36.364 | 6.55 | 0.00 | 41.95 | 2.66 |
5437 | 8467 | 6.202570 | TGAAATGGCATAACTTTTGCAGAAAC | 59.797 | 34.615 | 0.00 | 0.00 | 41.95 | 2.78 |
5438 | 8468 | 6.286758 | TGAAATGGCATAACTTTTGCAGAAA | 58.713 | 32.000 | 0.00 | 0.00 | 41.95 | 2.52 |
5439 | 8469 | 5.851720 | TGAAATGGCATAACTTTTGCAGAA | 58.148 | 33.333 | 0.00 | 0.00 | 41.95 | 3.02 |
5440 | 8470 | 5.465532 | TGAAATGGCATAACTTTTGCAGA | 57.534 | 34.783 | 0.00 | 0.00 | 41.95 | 4.26 |
5441 | 8471 | 6.730960 | AATGAAATGGCATAACTTTTGCAG | 57.269 | 33.333 | 0.00 | 0.00 | 41.95 | 4.41 |
5442 | 8472 | 6.485984 | ACAAATGAAATGGCATAACTTTTGCA | 59.514 | 30.769 | 25.85 | 10.57 | 41.95 | 4.08 |
5443 | 8473 | 6.901265 | ACAAATGAAATGGCATAACTTTTGC | 58.099 | 32.000 | 25.85 | 6.31 | 39.41 | 3.68 |
5450 | 8480 | 9.881649 | TGCTAAAATACAAATGAAATGGCATAA | 57.118 | 25.926 | 0.00 | 0.00 | 0.00 | 1.90 |
5451 | 8481 | 9.881649 | TTGCTAAAATACAAATGAAATGGCATA | 57.118 | 25.926 | 0.00 | 0.00 | 0.00 | 3.14 |
5452 | 8482 | 8.789825 | TTGCTAAAATACAAATGAAATGGCAT | 57.210 | 26.923 | 0.00 | 0.00 | 0.00 | 4.40 |
5453 | 8483 | 8.613060 | TTTGCTAAAATACAAATGAAATGGCA | 57.387 | 26.923 | 0.00 | 0.00 | 31.09 | 4.92 |
5537 | 8567 | 4.625742 | CGGTGACACGTTGATAAATTCTCT | 59.374 | 41.667 | 0.00 | 0.00 | 0.00 | 3.10 |
5628 | 8658 | 1.003051 | GCAGGGGTTAGGGGAGAGA | 59.997 | 63.158 | 0.00 | 0.00 | 0.00 | 3.10 |
5630 | 8660 | 2.365105 | CGCAGGGGTTAGGGGAGA | 60.365 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
5683 | 8727 | 3.992641 | TGTGGAGGAGGGCGGAGA | 61.993 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
5913 | 8960 | 0.038159 | ATCGTAGGCCATAGCTTCGC | 60.038 | 55.000 | 5.01 | 0.00 | 39.73 | 4.70 |
5929 | 8976 | 1.752753 | CGCTTCTCTCACTAGCATCG | 58.247 | 55.000 | 0.00 | 0.00 | 34.62 | 3.84 |
5968 | 9015 | 5.517770 | GCAAGAAACAGATATGCCAAATCAC | 59.482 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
5988 | 9035 | 3.667261 | CAGCGACTTCATGAAAAAGCAAG | 59.333 | 43.478 | 22.34 | 14.38 | 0.00 | 4.01 |
6002 | 9049 | 2.086054 | GGTGAACTGATCAGCGACTT | 57.914 | 50.000 | 22.83 | 9.30 | 45.70 | 3.01 |
6032 | 9083 | 4.592485 | ATCGAAGCCCAGTAGTATCAAG | 57.408 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
6056 | 9107 | 3.857010 | GCAACCAGTTCCCAAATTTCGAG | 60.857 | 47.826 | 0.00 | 0.00 | 0.00 | 4.04 |
6071 | 9122 | 2.699954 | ACGACCAAATCTAGCAACCAG | 58.300 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
6073 | 9124 | 2.161609 | CCAACGACCAAATCTAGCAACC | 59.838 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
6105 | 9156 | 0.033504 | ACTACAGAGCCACCACAACG | 59.966 | 55.000 | 0.00 | 0.00 | 0.00 | 4.10 |
6138 | 9189 | 7.411486 | AGTGCTACTAGTATGAGAAACACAT | 57.589 | 36.000 | 2.33 | 0.00 | 0.00 | 3.21 |
6152 | 9203 | 7.649705 | CACAAGGACACATTATAGTGCTACTAG | 59.350 | 40.741 | 0.00 | 0.00 | 43.23 | 2.57 |
6186 | 9237 | 7.676468 | AGAGAAAATTCTAAGACCACTCTACCT | 59.324 | 37.037 | 0.00 | 0.00 | 37.73 | 3.08 |
6187 | 9238 | 7.762159 | CAGAGAAAATTCTAAGACCACTCTACC | 59.238 | 40.741 | 0.00 | 0.00 | 37.73 | 3.18 |
6188 | 9239 | 8.308207 | ACAGAGAAAATTCTAAGACCACTCTAC | 58.692 | 37.037 | 0.00 | 0.00 | 37.73 | 2.59 |
6231 | 9282 | 3.462483 | TCCAGCTCTACAAAACACGAA | 57.538 | 42.857 | 0.00 | 0.00 | 0.00 | 3.85 |
6233 | 9284 | 3.058914 | CCTTTCCAGCTCTACAAAACACG | 60.059 | 47.826 | 0.00 | 0.00 | 0.00 | 4.49 |
6237 | 9288 | 4.335416 | CATCCCTTTCCAGCTCTACAAAA | 58.665 | 43.478 | 0.00 | 0.00 | 0.00 | 2.44 |
6335 | 9386 | 3.078097 | ACAGCCGCATTGTGTAAATACA | 58.922 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
6336 | 9387 | 3.757745 | ACAGCCGCATTGTGTAAATAC | 57.242 | 42.857 | 0.00 | 0.00 | 0.00 | 1.89 |
6338 | 9389 | 2.819608 | AGAACAGCCGCATTGTGTAAAT | 59.180 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
6340 | 9391 | 1.890876 | AGAACAGCCGCATTGTGTAA | 58.109 | 45.000 | 0.00 | 0.00 | 0.00 | 2.41 |
6342 | 9393 | 2.113860 | ATAGAACAGCCGCATTGTGT | 57.886 | 45.000 | 0.00 | 0.00 | 0.00 | 3.72 |
6350 | 9407 | 1.665679 | ACGCAATGAATAGAACAGCCG | 59.334 | 47.619 | 0.00 | 0.00 | 0.00 | 5.52 |
6354 | 9411 | 4.391830 | GTCTGGAACGCAATGAATAGAACA | 59.608 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
6365 | 9422 | 0.948623 | CGGTGATGTCTGGAACGCAA | 60.949 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.