Multiple sequence alignment - TraesCS2B01G184500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G184500 chr2B 100.000 6431 0 0 1 6431 159362150 159368580 0.000000e+00 11876.0
1 TraesCS2B01G184500 chr2B 85.027 374 48 7 4611 4977 159366538 159366910 2.190000e-99 374.0
2 TraesCS2B01G184500 chr2B 85.027 374 48 7 4389 4761 159366760 159367126 2.190000e-99 374.0
3 TraesCS2B01G184500 chr2B 92.568 148 11 0 2063 2210 41607615 41607468 5.050000e-51 213.0
4 TraesCS2B01G184500 chr2B 93.103 145 10 0 4384 4528 159366386 159366530 5.050000e-51 213.0
5 TraesCS2B01G184500 chr2B 93.103 145 10 0 4237 4381 159366533 159366677 5.050000e-51 213.0
6 TraesCS2B01G184500 chr2B 77.273 220 42 4 4166 4384 159366684 159366896 8.760000e-24 122.0
7 TraesCS2B01G184500 chr2A 97.529 3926 75 9 2211 6126 105628453 105632366 0.000000e+00 6693.0
8 TraesCS2B01G184500 chr2A 88.981 1561 84 39 542 2064 105626951 105628461 0.000000e+00 1849.0
9 TraesCS2B01G184500 chr2A 89.790 333 31 3 4 334 105626165 105626496 2.140000e-114 424.0
10 TraesCS2B01G184500 chr2A 84.492 374 50 5 4611 4977 105630632 105631004 4.740000e-96 363.0
11 TraesCS2B01G184500 chr2A 84.309 376 47 11 4389 4761 105630854 105631220 2.200000e-94 357.0
12 TraesCS2B01G184500 chr2A 93.103 145 10 0 4384 4528 105630480 105630624 5.050000e-51 213.0
13 TraesCS2B01G184500 chr2A 92.466 146 11 0 4237 4382 105630627 105630772 6.530000e-50 209.0
14 TraesCS2B01G184500 chr2A 77.273 220 42 4 4535 4747 105630409 105630627 8.760000e-24 122.0
15 TraesCS2B01G184500 chr2A 95.745 47 2 0 6382 6428 79172985 79173031 6.910000e-10 76.8
16 TraesCS2B01G184500 chr2A 97.059 34 1 0 2781 2814 161925286 161925253 2.500000e-04 58.4
17 TraesCS2B01G184500 chr2D 97.243 3264 56 9 2841 6087 110051562 110054808 0.000000e+00 5498.0
18 TraesCS2B01G184500 chr2D 94.401 1286 49 14 793 2064 110049076 110050352 0.000000e+00 1954.0
19 TraesCS2B01G184500 chr2D 98.438 640 8 2 2211 2848 110050344 110050983 0.000000e+00 1125.0
20 TraesCS2B01G184500 chr2D 88.478 460 43 8 4 458 110046715 110047169 1.220000e-151 547.0
21 TraesCS2B01G184500 chr2D 83.138 427 58 10 4389 4814 110053336 110053749 1.690000e-100 377.0
22 TraesCS2B01G184500 chr2D 84.759 374 49 7 4611 4977 110053114 110053486 1.020000e-97 368.0
23 TraesCS2B01G184500 chr2D 86.809 235 14 4 440 668 110048552 110048775 4.980000e-61 246.0
24 TraesCS2B01G184500 chr2D 92.466 146 11 0 4237 4382 110053109 110053254 6.530000e-50 209.0
25 TraesCS2B01G184500 chr2D 84.167 120 19 0 4265 4384 110053353 110053472 4.070000e-22 117.0
26 TraesCS2B01G184500 chr2D 93.617 47 3 0 6382 6428 78756844 78756890 3.220000e-08 71.3
27 TraesCS2B01G184500 chr5D 95.205 146 7 0 2063 2208 529256432 529256577 1.390000e-56 231.0
28 TraesCS2B01G184500 chr5A 94.040 151 9 0 2060 2210 623678664 623678814 5.020000e-56 230.0
29 TraesCS2B01G184500 chr5B 93.333 150 10 0 2060 2209 393983707 393983856 8.390000e-54 222.0
30 TraesCS2B01G184500 chr5B 92.715 151 11 0 2059 2209 339291927 339291777 1.090000e-52 219.0
31 TraesCS2B01G184500 chr3A 93.151 146 10 0 2065 2210 594011704 594011849 1.400000e-51 215.0
32 TraesCS2B01G184500 chr1B 93.151 146 10 0 2065 2210 641210190 641210335 1.400000e-51 215.0
33 TraesCS2B01G184500 chr1B 81.041 269 35 10 6124 6380 14622380 14622116 3.930000e-47 200.0
34 TraesCS2B01G184500 chr7D 92.568 148 11 0 2063 2210 579747613 579747466 5.050000e-51 213.0
35 TraesCS2B01G184500 chr7A 92.568 148 10 1 2064 2210 285605803 285605656 1.820000e-50 211.0
36 TraesCS2B01G184500 chr7A 87.500 48 5 1 2772 2818 715257855 715257902 3.000000e-03 54.7
37 TraesCS2B01G184500 chr7A 87.500 48 5 1 2772 2818 715346664 715346711 3.000000e-03 54.7
38 TraesCS2B01G184500 chr7A 87.500 48 5 1 2772 2818 715445302 715445349 3.000000e-03 54.7
39 TraesCS2B01G184500 chr7A 87.500 48 5 1 2772 2818 715586943 715586990 3.000000e-03 54.7
40 TraesCS2B01G184500 chr6B 76.995 213 39 7 6116 6325 443853138 443853343 5.270000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G184500 chr2B 159362150 159368580 6430 False 2195.333333 11876 88.922167 1 6431 6 chr2B.!!$F1 6430
1 TraesCS2B01G184500 chr2A 105626165 105632366 6201 False 1278.750000 6693 88.492875 4 6126 8 chr2A.!!$F2 6122
2 TraesCS2B01G184500 chr2D 110046715 110054808 8093 False 1160.111111 5498 89.988778 4 6087 9 chr2D.!!$F2 6083

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
120 123 0.825840 TTCCTTTTCCCCTTGGCACG 60.826 55.0 0.00 0.00 0.00 5.34 F
2073 4024 0.036577 ACATGAAGAAGAGCGCTGCT 60.037 50.0 18.48 9.38 43.88 4.24 F
3239 5781 0.032540 CAACCAGCTCTTGCAAACCC 59.967 55.0 0.00 0.00 42.74 4.11 F
4363 6906 0.468226 TGGAATACACATCTCCCGCC 59.532 55.0 0.00 0.00 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2100 4051 0.031585 ACAGTCTGCTCGTACGCAAA 59.968 50.000 11.24 0.0 39.80 3.68 R
3298 5840 0.744771 GGGTTGCCGAGAATCCTGTC 60.745 60.000 0.00 0.0 0.00 3.51 R
4528 7071 1.734465 GGTGTTTCTGCATCTCCTTCG 59.266 52.381 0.00 0.0 0.00 3.79 R
6308 8870 0.091344 CGCTGTTTCGATGACGTGTC 59.909 55.000 0.00 0.0 40.69 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 47 2.224305 CCCAACACGTTTTCTCCTCTCT 60.224 50.000 0.00 0.00 0.00 3.10
60 62 1.000283 CTCTCTGCCACGTGTTTCTCT 60.000 52.381 15.65 0.00 0.00 3.10
90 93 0.889186 TTTTCCCTCTTGCCTCACGC 60.889 55.000 0.00 0.00 38.31 5.34
114 117 2.795360 TCTTCCCTTTCCTTTTCCCCTT 59.205 45.455 0.00 0.00 0.00 3.95
120 123 0.825840 TTCCTTTTCCCCTTGGCACG 60.826 55.000 0.00 0.00 0.00 5.34
239 242 6.382087 TGGTACCTATCATCCTTATCACACT 58.618 40.000 14.36 0.00 0.00 3.55
246 249 9.467796 CCTATCATCCTTATCACACTAGTATCA 57.532 37.037 0.00 0.00 0.00 2.15
248 251 8.712228 ATCATCCTTATCACACTAGTATCACA 57.288 34.615 0.00 0.00 0.00 3.58
249 252 8.171164 TCATCCTTATCACACTAGTATCACAG 57.829 38.462 0.00 0.00 0.00 3.66
271 274 8.271487 CACAGTGTTGTCATATTTATCATCTCG 58.729 37.037 0.00 0.00 34.62 4.04
275 278 8.982685 GTGTTGTCATATTTATCATCTCGATGT 58.017 33.333 6.78 0.00 39.72 3.06
296 299 2.847327 ACCCTTATCTCATCGCCATG 57.153 50.000 0.00 0.00 0.00 3.66
318 321 2.548480 CGGTCCAAAGTTCTTCAACTCC 59.452 50.000 0.00 0.00 42.45 3.85
320 323 3.565902 GGTCCAAAGTTCTTCAACTCCAG 59.434 47.826 0.00 0.00 42.45 3.86
350 353 1.155889 CACCTGCTTCGCATGTTACA 58.844 50.000 0.00 0.00 35.39 2.41
351 354 1.135972 CACCTGCTTCGCATGTTACAC 60.136 52.381 0.00 0.00 35.39 2.90
367 370 3.043713 ACTGCGCACCATGTGTCG 61.044 61.111 5.66 0.00 35.75 4.35
374 377 1.737029 CGCACCATGTGTCGAGATTCT 60.737 52.381 0.00 0.00 36.03 2.40
388 394 6.183360 TGTCGAGATTCTTAACCAGGGAATAG 60.183 42.308 0.00 0.00 30.98 1.73
394 400 4.108570 TCTTAACCAGGGAATAGGCTTCA 58.891 43.478 0.00 0.00 0.00 3.02
404 410 4.764308 GGGAATAGGCTTCATCCAGAATTC 59.236 45.833 12.95 0.00 35.25 2.17
425 431 1.134128 TGTGCTATCGGTGGCATCATT 60.134 47.619 10.83 0.00 44.01 2.57
435 441 2.279741 GTGGCATCATTAGTCGAGCAA 58.720 47.619 0.00 0.00 0.00 3.91
481 1888 4.261405 GGTTGAACGATGACATGACCAAAA 60.261 41.667 0.00 0.00 0.00 2.44
482 1889 5.460646 GTTGAACGATGACATGACCAAAAT 58.539 37.500 0.00 0.00 0.00 1.82
488 1895 7.867445 ACGATGACATGACCAAAATTTTTAC 57.133 32.000 0.00 0.00 0.00 2.01
502 1909 8.127954 CCAAAATTTTTACTTGACAATTGTGGG 58.872 33.333 17.58 8.05 39.15 4.61
550 1960 5.122239 TGGTCTTCAAATCAATACTTGAGCG 59.878 40.000 0.00 0.00 43.98 5.03
600 2323 7.713507 GCAATGTGATAATAGTAACCACTACCA 59.286 37.037 7.34 0.00 40.06 3.25
620 2350 4.141459 ACCAGGACGATGAGATCTACTGTA 60.141 45.833 0.00 0.00 0.00 2.74
621 2351 4.214545 CCAGGACGATGAGATCTACTGTAC 59.785 50.000 0.00 0.00 0.00 2.90
622 2352 5.060506 CAGGACGATGAGATCTACTGTACT 58.939 45.833 0.00 0.00 0.00 2.73
623 2353 6.224584 CAGGACGATGAGATCTACTGTACTA 58.775 44.000 0.00 0.00 0.00 1.82
624 2354 6.146510 CAGGACGATGAGATCTACTGTACTAC 59.853 46.154 0.00 0.00 0.00 2.73
625 2355 6.042322 AGGACGATGAGATCTACTGTACTACT 59.958 42.308 0.00 0.00 0.00 2.57
626 2356 6.366877 GGACGATGAGATCTACTGTACTACTC 59.633 46.154 0.00 0.00 0.00 2.59
627 2357 6.225318 ACGATGAGATCTACTGTACTACTCC 58.775 44.000 0.00 0.00 0.00 3.85
628 2358 6.042322 ACGATGAGATCTACTGTACTACTCCT 59.958 42.308 0.00 0.00 0.00 3.69
629 2359 7.233144 ACGATGAGATCTACTGTACTACTCCTA 59.767 40.741 0.00 0.00 0.00 2.94
646 2376 6.875972 ACTCCTACATTGGTTCTCTTGTAT 57.124 37.500 0.00 0.00 0.00 2.29
689 2429 4.249661 GCCTTTTGGACAAAGTTTTCACA 58.750 39.130 0.00 0.00 44.07 3.58
692 2432 5.576774 CCTTTTGGACAAAGTTTTCACACTC 59.423 40.000 0.00 0.00 44.07 3.51
693 2433 5.713792 TTTGGACAAAGTTTTCACACTCA 57.286 34.783 0.00 0.00 0.00 3.41
733 2476 1.373873 GGGTCGTCGTCTCCCAAAC 60.374 63.158 14.46 0.00 40.79 2.93
809 2731 1.840635 CCCGAGAGAGGAAATTCCCTT 59.159 52.381 8.66 0.00 37.19 3.95
907 2833 2.290960 CCCTCCAGTTCGAAAATTCCCT 60.291 50.000 0.00 0.00 0.00 4.20
1027 2959 3.551407 GCCCCGATCTGACCTCCC 61.551 72.222 0.00 0.00 0.00 4.30
1115 3053 1.226030 GCCGAGGTGCGTAACTGTTT 61.226 55.000 0.00 0.00 38.67 2.83
1116 3054 0.788391 CCGAGGTGCGTAACTGTTTC 59.212 55.000 0.00 0.00 38.67 2.78
1250 3194 7.416817 CAATTGTTTGTTCCCCTTTTTGATTC 58.583 34.615 0.00 0.00 0.00 2.52
1379 3323 2.697431 TGCTAACCGTGACAAATTGC 57.303 45.000 0.00 0.00 0.00 3.56
1437 3387 4.749976 ACTCTTAGATTGCCTTCGAGTTC 58.250 43.478 0.00 0.00 32.70 3.01
1463 3413 0.809241 GGAGTGCCTCTGCGATTCTG 60.809 60.000 0.00 0.00 41.78 3.02
1598 3548 1.717032 TACCTGTCCTCACTTGCAGT 58.283 50.000 0.00 0.00 0.00 4.40
1625 3575 2.496111 TCTCAAATTAACCACGGCGTT 58.504 42.857 11.19 0.00 0.00 4.84
1734 3684 4.273005 CGATAAACGGGGATCTTTTGTG 57.727 45.455 0.00 0.00 38.46 3.33
2045 3996 2.936993 GCTTCGTGTCATGGTCCTCAAT 60.937 50.000 0.00 0.00 0.00 2.57
2055 4006 5.931146 GTCATGGTCCTCAATCTCATATGAC 59.069 44.000 0.00 0.00 36.34 3.06
2056 4007 5.603813 TCATGGTCCTCAATCTCATATGACA 59.396 40.000 0.00 0.00 0.00 3.58
2057 4008 6.271624 TCATGGTCCTCAATCTCATATGACAT 59.728 38.462 0.00 0.00 0.00 3.06
2058 4009 5.861727 TGGTCCTCAATCTCATATGACATG 58.138 41.667 0.00 1.58 0.00 3.21
2059 4010 5.603813 TGGTCCTCAATCTCATATGACATGA 59.396 40.000 0.00 5.84 0.00 3.07
2060 4011 6.100134 TGGTCCTCAATCTCATATGACATGAA 59.900 38.462 0.00 0.00 0.00 2.57
2061 4012 6.649973 GGTCCTCAATCTCATATGACATGAAG 59.350 42.308 0.00 1.33 0.00 3.02
2062 4013 7.440198 GTCCTCAATCTCATATGACATGAAGA 58.560 38.462 0.00 3.56 0.00 2.87
2063 4014 7.930325 GTCCTCAATCTCATATGACATGAAGAA 59.070 37.037 0.00 0.00 0.00 2.52
2064 4015 8.148999 TCCTCAATCTCATATGACATGAAGAAG 58.851 37.037 0.00 0.00 0.00 2.85
2065 4016 8.148999 CCTCAATCTCATATGACATGAAGAAGA 58.851 37.037 0.00 0.00 0.00 2.87
2066 4017 9.198837 CTCAATCTCATATGACATGAAGAAGAG 57.801 37.037 0.00 5.38 0.00 2.85
2067 4018 7.656542 TCAATCTCATATGACATGAAGAAGAGC 59.343 37.037 0.00 0.00 0.00 4.09
2068 4019 5.527033 TCTCATATGACATGAAGAAGAGCG 58.473 41.667 0.00 0.00 0.00 5.03
2069 4020 4.053983 TCATATGACATGAAGAAGAGCGC 58.946 43.478 0.00 0.00 0.00 5.92
2070 4021 2.687700 ATGACATGAAGAAGAGCGCT 57.312 45.000 11.27 11.27 0.00 5.92
2071 4022 1.718396 TGACATGAAGAAGAGCGCTG 58.282 50.000 18.48 0.00 0.00 5.18
2072 4023 0.373024 GACATGAAGAAGAGCGCTGC 59.627 55.000 18.48 6.71 0.00 5.25
2073 4024 0.036577 ACATGAAGAAGAGCGCTGCT 60.037 50.000 18.48 9.38 43.88 4.24
2074 4025 1.205655 ACATGAAGAAGAGCGCTGCTA 59.794 47.619 18.48 0.00 39.88 3.49
2075 4026 2.158986 ACATGAAGAAGAGCGCTGCTAT 60.159 45.455 18.48 0.00 39.88 2.97
2076 4027 3.068732 ACATGAAGAAGAGCGCTGCTATA 59.931 43.478 18.48 2.46 39.88 1.31
2077 4028 3.085443 TGAAGAAGAGCGCTGCTATAC 57.915 47.619 18.48 0.00 39.88 1.47
2078 4029 2.047769 GAAGAAGAGCGCTGCTATACG 58.952 52.381 18.48 0.00 39.88 3.06
2079 4030 1.025812 AGAAGAGCGCTGCTATACGT 58.974 50.000 18.48 0.00 39.88 3.57
2080 4031 2.219458 AGAAGAGCGCTGCTATACGTA 58.781 47.619 18.48 0.00 39.88 3.57
2081 4032 2.031857 AGAAGAGCGCTGCTATACGTAC 60.032 50.000 18.48 0.00 39.88 3.67
2082 4033 0.235144 AGAGCGCTGCTATACGTACG 59.765 55.000 18.48 15.01 39.88 3.67
2083 4034 0.234106 GAGCGCTGCTATACGTACGA 59.766 55.000 24.41 6.04 39.88 3.43
2084 4035 0.873054 AGCGCTGCTATACGTACGAT 59.127 50.000 24.41 13.27 36.99 3.73
2085 4036 1.136029 AGCGCTGCTATACGTACGATC 60.136 52.381 24.41 6.19 36.99 3.69
2086 4037 1.399343 GCGCTGCTATACGTACGATCA 60.399 52.381 24.41 6.86 0.00 2.92
2087 4038 2.912366 CGCTGCTATACGTACGATCAA 58.088 47.619 24.41 4.52 0.00 2.57
2088 4039 3.294102 CGCTGCTATACGTACGATCAAA 58.706 45.455 24.41 1.85 0.00 2.69
2089 4040 3.117507 CGCTGCTATACGTACGATCAAAC 59.882 47.826 24.41 7.11 0.00 2.93
2090 4041 4.288531 GCTGCTATACGTACGATCAAACT 58.711 43.478 24.41 0.00 0.00 2.66
2091 4042 4.738740 GCTGCTATACGTACGATCAAACTT 59.261 41.667 24.41 0.00 0.00 2.66
2092 4043 5.108330 GCTGCTATACGTACGATCAAACTTC 60.108 44.000 24.41 2.35 0.00 3.01
2093 4044 5.882553 TGCTATACGTACGATCAAACTTCA 58.117 37.500 24.41 4.90 0.00 3.02
2094 4045 6.500910 TGCTATACGTACGATCAAACTTCAT 58.499 36.000 24.41 0.00 0.00 2.57
2095 4046 7.641760 TGCTATACGTACGATCAAACTTCATA 58.358 34.615 24.41 0.00 0.00 2.15
2096 4047 7.588854 TGCTATACGTACGATCAAACTTCATAC 59.411 37.037 24.41 0.00 0.00 2.39
2097 4048 6.964677 ATACGTACGATCAAACTTCATACG 57.035 37.500 24.41 0.00 39.72 3.06
2098 4049 4.973396 ACGTACGATCAAACTTCATACGA 58.027 39.130 24.41 0.00 37.83 3.43
2099 4050 5.575957 ACGTACGATCAAACTTCATACGAT 58.424 37.500 24.41 0.00 37.83 3.73
2100 4051 6.032094 ACGTACGATCAAACTTCATACGATT 58.968 36.000 24.41 0.00 37.83 3.34
2101 4052 6.529125 ACGTACGATCAAACTTCATACGATTT 59.471 34.615 24.41 0.00 37.83 2.17
2102 4053 7.062605 ACGTACGATCAAACTTCATACGATTTT 59.937 33.333 24.41 0.00 37.83 1.82
2103 4054 7.367228 CGTACGATCAAACTTCATACGATTTTG 59.633 37.037 10.44 0.00 36.85 2.44
2104 4055 6.021596 ACGATCAAACTTCATACGATTTTGC 58.978 36.000 0.00 0.00 30.10 3.68
2105 4056 5.167803 CGATCAAACTTCATACGATTTTGCG 59.832 40.000 0.00 0.00 30.10 4.85
2113 4064 1.979897 TACGATTTTGCGTACGAGCA 58.020 45.000 21.65 5.23 43.61 4.26
2119 4070 3.351450 TGCGTACGAGCAGACTGT 58.649 55.556 21.65 0.00 42.92 3.55
2120 4071 1.658114 TGCGTACGAGCAGACTGTT 59.342 52.632 21.65 0.00 42.92 3.16
2121 4072 0.386858 TGCGTACGAGCAGACTGTTC 60.387 55.000 21.65 9.13 42.92 3.18
2122 4073 0.109689 GCGTACGAGCAGACTGTTCT 60.110 55.000 21.65 7.02 37.05 3.01
2139 4090 2.527123 TGGTACAGTGGGCCCGAA 60.527 61.111 19.37 0.00 0.00 4.30
2140 4091 2.046604 GGTACAGTGGGCCCGAAC 60.047 66.667 19.37 11.24 0.00 3.95
2141 4092 2.433664 GTACAGTGGGCCCGAACG 60.434 66.667 19.37 8.12 0.00 3.95
2142 4093 2.918802 TACAGTGGGCCCGAACGT 60.919 61.111 19.37 14.08 0.00 3.99
2143 4094 2.509651 TACAGTGGGCCCGAACGTT 61.510 57.895 19.37 0.00 0.00 3.99
2144 4095 2.718747 TACAGTGGGCCCGAACGTTG 62.719 60.000 19.37 8.57 0.00 4.10
2145 4096 4.636435 AGTGGGCCCGAACGTTGG 62.636 66.667 19.37 3.82 0.00 3.77
2159 4110 3.089788 GTTGGGAACGAACCTGTGT 57.910 52.632 0.00 0.00 0.00 3.72
2160 4111 0.942252 GTTGGGAACGAACCTGTGTC 59.058 55.000 0.00 0.00 0.00 3.67
2161 4112 0.834612 TTGGGAACGAACCTGTGTCT 59.165 50.000 0.00 0.00 0.00 3.41
2162 4113 0.834612 TGGGAACGAACCTGTGTCTT 59.165 50.000 0.00 0.00 0.00 3.01
2163 4114 1.226746 GGGAACGAACCTGTGTCTTG 58.773 55.000 0.00 0.00 0.00 3.02
2164 4115 1.474498 GGGAACGAACCTGTGTCTTGT 60.474 52.381 0.00 0.00 0.00 3.16
2165 4116 1.865340 GGAACGAACCTGTGTCTTGTC 59.135 52.381 0.00 0.00 0.00 3.18
2166 4117 1.521423 GAACGAACCTGTGTCTTGTCG 59.479 52.381 0.00 0.00 0.00 4.35
2167 4118 0.458669 ACGAACCTGTGTCTTGTCGT 59.541 50.000 0.00 0.00 0.00 4.34
2168 4119 1.677576 ACGAACCTGTGTCTTGTCGTA 59.322 47.619 0.00 0.00 0.00 3.43
2169 4120 2.049228 CGAACCTGTGTCTTGTCGTAC 58.951 52.381 0.00 0.00 0.00 3.67
2170 4121 2.542205 CGAACCTGTGTCTTGTCGTACA 60.542 50.000 0.00 0.00 0.00 2.90
2171 4122 3.450578 GAACCTGTGTCTTGTCGTACAA 58.549 45.455 0.00 0.00 36.54 2.41
2172 4123 3.530265 ACCTGTGTCTTGTCGTACAAA 57.470 42.857 0.00 0.00 37.69 2.83
2173 4124 3.864243 ACCTGTGTCTTGTCGTACAAAA 58.136 40.909 0.00 0.00 37.69 2.44
2174 4125 4.448210 ACCTGTGTCTTGTCGTACAAAAT 58.552 39.130 0.00 0.00 37.69 1.82
2175 4126 4.510340 ACCTGTGTCTTGTCGTACAAAATC 59.490 41.667 0.00 0.00 37.69 2.17
2176 4127 4.376008 CCTGTGTCTTGTCGTACAAAATCG 60.376 45.833 0.00 0.00 37.69 3.34
2177 4128 4.114073 TGTGTCTTGTCGTACAAAATCGT 58.886 39.130 0.00 0.00 37.69 3.73
2178 4129 5.280164 TGTGTCTTGTCGTACAAAATCGTA 58.720 37.500 0.00 0.00 37.69 3.43
2179 4130 5.921976 TGTGTCTTGTCGTACAAAATCGTAT 59.078 36.000 0.00 0.00 37.69 3.06
2180 4131 6.129035 TGTGTCTTGTCGTACAAAATCGTATG 60.129 38.462 0.00 0.00 37.69 2.39
2181 4132 5.346551 TGTCTTGTCGTACAAAATCGTATGG 59.653 40.000 0.00 0.00 37.69 2.74
2182 4133 4.865925 TCTTGTCGTACAAAATCGTATGGG 59.134 41.667 0.00 0.00 37.69 4.00
2183 4134 3.523547 TGTCGTACAAAATCGTATGGGG 58.476 45.455 0.00 0.00 0.00 4.96
2184 4135 3.195182 TGTCGTACAAAATCGTATGGGGA 59.805 43.478 0.00 0.00 0.00 4.81
2185 4136 4.183101 GTCGTACAAAATCGTATGGGGAA 58.817 43.478 0.00 0.00 0.00 3.97
2186 4137 4.630940 GTCGTACAAAATCGTATGGGGAAA 59.369 41.667 0.00 0.00 0.00 3.13
2187 4138 5.122082 GTCGTACAAAATCGTATGGGGAAAA 59.878 40.000 0.00 0.00 0.00 2.29
2188 4139 5.881443 TCGTACAAAATCGTATGGGGAAAAT 59.119 36.000 0.00 0.00 0.00 1.82
2189 4140 7.011295 GTCGTACAAAATCGTATGGGGAAAATA 59.989 37.037 0.00 0.00 0.00 1.40
2190 4141 7.716123 TCGTACAAAATCGTATGGGGAAAATAT 59.284 33.333 0.00 0.00 0.00 1.28
2191 4142 8.013378 CGTACAAAATCGTATGGGGAAAATATC 58.987 37.037 0.00 0.00 0.00 1.63
2192 4143 6.966021 ACAAAATCGTATGGGGAAAATATCG 58.034 36.000 0.00 0.00 0.00 2.92
2193 4144 6.544564 ACAAAATCGTATGGGGAAAATATCGT 59.455 34.615 0.00 0.00 0.00 3.73
2194 4145 7.716123 ACAAAATCGTATGGGGAAAATATCGTA 59.284 33.333 0.00 0.00 0.00 3.43
2195 4146 7.662604 AAATCGTATGGGGAAAATATCGTAC 57.337 36.000 0.00 0.00 0.00 3.67
2196 4147 4.797471 TCGTATGGGGAAAATATCGTACG 58.203 43.478 9.53 9.53 36.11 3.67
2197 4148 3.365820 CGTATGGGGAAAATATCGTACGC 59.634 47.826 11.24 0.00 0.00 4.42
2198 4149 2.983907 TGGGGAAAATATCGTACGCA 57.016 45.000 11.24 0.48 0.00 5.24
2199 4150 3.263489 TGGGGAAAATATCGTACGCAA 57.737 42.857 11.24 0.49 0.00 4.85
2201 4152 2.546789 GGGGAAAATATCGTACGCAAGG 59.453 50.000 11.24 0.00 46.39 3.61
2202 4153 2.032290 GGGAAAATATCGTACGCAAGGC 60.032 50.000 11.24 0.00 46.39 4.35
2203 4154 2.610374 GGAAAATATCGTACGCAAGGCA 59.390 45.455 11.24 0.00 46.39 4.75
2204 4155 3.303132 GGAAAATATCGTACGCAAGGCAG 60.303 47.826 11.24 0.00 46.39 4.85
2205 4156 2.596904 AATATCGTACGCAAGGCAGT 57.403 45.000 11.24 0.00 46.39 4.40
2206 4157 2.596904 ATATCGTACGCAAGGCAGTT 57.403 45.000 11.24 0.00 46.39 3.16
2207 4158 2.373540 TATCGTACGCAAGGCAGTTT 57.626 45.000 11.24 0.00 46.39 2.66
2208 4159 1.076332 ATCGTACGCAAGGCAGTTTC 58.924 50.000 11.24 0.00 46.39 2.78
2209 4160 1.129809 CGTACGCAAGGCAGTTTCG 59.870 57.895 0.52 0.00 46.39 3.46
2248 4199 4.342378 TGGAGATAGAAATCGAGTTCAGGG 59.658 45.833 25.61 0.00 37.19 4.45
2254 4205 0.911769 AATCGAGTTCAGGGCATGGA 59.088 50.000 0.00 0.00 0.00 3.41
2377 4328 4.430007 TGAACTGTAGGACGTATGATTGC 58.570 43.478 0.00 0.00 0.00 3.56
2851 5390 7.752239 TCGAAAGAAGTTTCTAACAGTATACCG 59.248 37.037 0.00 0.00 40.10 4.02
2869 5411 7.820386 AGTATACCGTTTGTGATATGTTTGTCA 59.180 33.333 0.00 0.00 0.00 3.58
3036 5578 4.692625 CGGGCTAAGGATGATGAACTATTG 59.307 45.833 0.00 0.00 0.00 1.90
3090 5632 2.171659 TGCAAAGAGGGTACTGACACAA 59.828 45.455 0.00 0.00 0.00 3.33
3099 5641 2.038557 GGTACTGACACAATCTGGTGGT 59.961 50.000 0.00 0.00 43.08 4.16
3208 5750 7.699566 TGTGAATGAACTTACACACTTTAACC 58.300 34.615 0.00 0.00 38.14 2.85
3239 5781 0.032540 CAACCAGCTCTTGCAAACCC 59.967 55.000 0.00 0.00 42.74 4.11
3271 5813 6.352516 AGGAGAACTTAGCACCAAATATGAG 58.647 40.000 0.00 0.00 0.00 2.90
3298 5840 2.076100 TGGACAGCAAAAGAGCATACG 58.924 47.619 0.00 0.00 36.85 3.06
3521 6064 4.510038 AATTTCAGGTGTGAAGCATGAC 57.490 40.909 0.00 0.00 43.66 3.06
3810 6353 3.445008 TGGAACAGCTTCACTCCTAGAT 58.555 45.455 0.00 0.00 0.00 1.98
3979 6522 2.096069 CAGAACGGAGCAACATCACAAG 60.096 50.000 0.00 0.00 0.00 3.16
4363 6906 0.468226 TGGAATACACATCTCCCGCC 59.532 55.000 0.00 0.00 0.00 6.13
4528 7071 2.094597 TGCTCATACAGTTTTGCATGCC 60.095 45.455 16.68 0.00 29.69 4.40
4985 7528 3.432592 CGCAGATGCAGAAATATCAGAGG 59.567 47.826 5.55 0.00 42.21 3.69
5107 7650 1.372251 AGAGAACTGCAGCGACGTG 60.372 57.895 15.27 0.00 0.00 4.49
5331 7880 3.492102 TGTTGAACTTTCCAGGAGAGG 57.508 47.619 11.70 0.00 0.00 3.69
5636 8186 6.070538 AGCTGTTTGTATGAGGTCTCAATAGT 60.071 38.462 4.67 0.00 43.58 2.12
5826 8376 5.163561 CGGAATATATTGGCTTGGTTTGTGT 60.164 40.000 1.78 0.00 0.00 3.72
5859 8409 5.331902 ACGACTTTCTTGTTGTTGAACATG 58.668 37.500 0.00 0.00 41.77 3.21
6024 8586 5.045505 GTCCTGGTTCTAGAAAGAGGGATTT 60.046 44.000 22.47 0.00 31.96 2.17
6036 8598 5.324832 AAGAGGGATTTGTCTTTCAAGGA 57.675 39.130 0.00 0.00 37.35 3.36
6073 8635 7.983484 GCCTTGGATTTCACAGAAAATTCATAT 59.017 33.333 0.00 0.00 34.78 1.78
6092 8654 8.408043 TTCATATGTGAAAATCCTCACTGTTT 57.592 30.769 1.92 0.00 45.03 2.83
6093 8655 8.044060 TCATATGTGAAAATCCTCACTGTTTC 57.956 34.615 1.90 0.00 45.03 2.78
6094 8656 7.665145 TCATATGTGAAAATCCTCACTGTTTCA 59.335 33.333 1.90 0.00 45.03 2.69
6095 8657 5.756195 TGTGAAAATCCTCACTGTTTCAG 57.244 39.130 5.43 0.00 45.03 3.02
6096 8658 5.436175 TGTGAAAATCCTCACTGTTTCAGA 58.564 37.500 3.70 0.00 45.03 3.27
6097 8659 5.528690 TGTGAAAATCCTCACTGTTTCAGAG 59.471 40.000 3.70 0.00 45.03 3.35
6098 8660 4.516698 TGAAAATCCTCACTGTTTCAGAGC 59.483 41.667 3.70 0.00 35.60 4.09
6099 8661 2.777832 ATCCTCACTGTTTCAGAGCC 57.222 50.000 3.70 0.00 35.18 4.70
6114 8676 1.546476 AGAGCCTCGTAGGAGTGTTTG 59.454 52.381 11.31 0.00 37.67 2.93
6126 8688 8.776470 TCGTAGGAGTGTTTGGTTTTTATAAAG 58.224 33.333 0.00 0.00 0.00 1.85
6127 8689 8.776470 CGTAGGAGTGTTTGGTTTTTATAAAGA 58.224 33.333 0.00 0.00 0.00 2.52
6129 8691 8.990163 AGGAGTGTTTGGTTTTTATAAAGAGA 57.010 30.769 0.00 0.00 0.00 3.10
6130 8692 9.416284 AGGAGTGTTTGGTTTTTATAAAGAGAA 57.584 29.630 0.00 0.00 0.00 2.87
6147 8709 7.807977 AAAGAGAAAAATTCACTACAGAGCA 57.192 32.000 0.00 0.00 30.22 4.26
6148 8710 7.992754 AAGAGAAAAATTCACTACAGAGCAT 57.007 32.000 0.00 0.00 30.22 3.79
6149 8711 9.507329 AAAGAGAAAAATTCACTACAGAGCATA 57.493 29.630 0.00 0.00 30.22 3.14
6150 8712 9.678260 AAGAGAAAAATTCACTACAGAGCATAT 57.322 29.630 0.00 0.00 30.22 1.78
6157 8719 7.721286 ATTCACTACAGAGCATATAACTTGC 57.279 36.000 0.00 0.00 40.45 4.01
6158 8720 5.281727 TCACTACAGAGCATATAACTTGCG 58.718 41.667 0.00 0.00 44.82 4.85
6159 8721 4.051922 ACTACAGAGCATATAACTTGCGC 58.948 43.478 0.00 0.00 44.82 6.09
6162 8724 2.487934 AGAGCATATAACTTGCGCTGG 58.512 47.619 9.73 3.50 46.41 4.85
6163 8725 2.158900 AGAGCATATAACTTGCGCTGGT 60.159 45.455 9.73 4.25 46.41 4.00
6164 8726 1.942657 AGCATATAACTTGCGCTGGTG 59.057 47.619 9.73 0.00 44.82 4.17
6165 8727 1.002468 GCATATAACTTGCGCTGGTGG 60.002 52.381 9.73 0.00 0.00 4.61
6166 8728 1.002468 CATATAACTTGCGCTGGTGGC 60.002 52.381 9.73 0.00 37.64 5.01
6167 8729 0.746563 TATAACTTGCGCTGGTGGCC 60.747 55.000 9.73 0.00 37.74 5.36
6168 8730 2.762969 ATAACTTGCGCTGGTGGCCA 62.763 55.000 9.73 0.00 37.74 5.36
6171 8733 4.892965 TTGCGCTGGTGGCCACTT 62.893 61.111 33.91 0.00 37.74 3.16
6174 8736 3.052082 CGCTGGTGGCCACTTCAG 61.052 66.667 33.91 30.70 37.74 3.02
6175 8737 2.113986 GCTGGTGGCCACTTCAGT 59.886 61.111 33.91 0.00 34.27 3.41
6176 8738 1.968540 GCTGGTGGCCACTTCAGTC 60.969 63.158 33.91 22.64 34.27 3.51
6177 8739 1.669115 CTGGTGGCCACTTCAGTCG 60.669 63.158 33.91 10.23 0.00 4.18
6178 8740 3.050275 GGTGGCCACTTCAGTCGC 61.050 66.667 33.91 12.20 0.00 5.19
6179 8741 2.031163 GTGGCCACTTCAGTCGCT 59.969 61.111 29.12 0.00 32.65 4.93
6180 8742 2.031012 TGGCCACTTCAGTCGCTG 59.969 61.111 0.00 1.02 32.65 5.18
6181 8743 2.031163 GGCCACTTCAGTCGCTGT 59.969 61.111 0.00 0.00 32.65 4.40
6182 8744 2.320587 GGCCACTTCAGTCGCTGTG 61.321 63.158 0.00 0.00 32.65 3.66
6183 8745 3.957260 CCACTTCAGTCGCTGTGG 58.043 61.111 6.72 0.00 42.98 4.17
6184 8746 1.069765 CCACTTCAGTCGCTGTGGT 59.930 57.895 0.00 4.87 43.41 4.16
6185 8747 0.532862 CCACTTCAGTCGCTGTGGTT 60.533 55.000 0.00 0.00 43.41 3.67
6186 8748 1.270094 CCACTTCAGTCGCTGTGGTTA 60.270 52.381 0.00 0.00 43.41 2.85
6187 8749 2.061773 CACTTCAGTCGCTGTGGTTAG 58.938 52.381 6.72 0.00 32.61 2.34
6188 8750 1.961394 ACTTCAGTCGCTGTGGTTAGA 59.039 47.619 6.72 0.00 32.61 2.10
6189 8751 2.364324 ACTTCAGTCGCTGTGGTTAGAA 59.636 45.455 6.72 0.00 32.61 2.10
6190 8752 3.181469 ACTTCAGTCGCTGTGGTTAGAAA 60.181 43.478 6.72 0.00 32.61 2.52
6191 8753 3.678056 TCAGTCGCTGTGGTTAGAAAT 57.322 42.857 6.72 0.00 32.61 2.17
6192 8754 4.794278 TCAGTCGCTGTGGTTAGAAATA 57.206 40.909 6.72 0.00 32.61 1.40
6193 8755 4.491676 TCAGTCGCTGTGGTTAGAAATAC 58.508 43.478 6.72 0.00 32.61 1.89
6194 8756 3.617263 CAGTCGCTGTGGTTAGAAATACC 59.383 47.826 0.00 0.00 36.17 2.73
6195 8757 2.934553 GTCGCTGTGGTTAGAAATACCC 59.065 50.000 0.00 0.00 34.66 3.69
6196 8758 1.931172 CGCTGTGGTTAGAAATACCCG 59.069 52.381 0.00 0.00 34.66 5.28
6197 8759 2.417651 CGCTGTGGTTAGAAATACCCGA 60.418 50.000 0.00 0.00 34.66 5.14
6198 8760 3.602483 GCTGTGGTTAGAAATACCCGAA 58.398 45.455 0.00 0.00 34.66 4.30
6199 8761 4.004982 GCTGTGGTTAGAAATACCCGAAA 58.995 43.478 0.00 0.00 34.66 3.46
6200 8762 4.638865 GCTGTGGTTAGAAATACCCGAAAT 59.361 41.667 0.00 0.00 34.66 2.17
6201 8763 5.818857 GCTGTGGTTAGAAATACCCGAAATA 59.181 40.000 0.00 0.00 34.66 1.40
6202 8764 6.485648 GCTGTGGTTAGAAATACCCGAAATAT 59.514 38.462 0.00 0.00 34.66 1.28
6203 8765 7.658575 GCTGTGGTTAGAAATACCCGAAATATA 59.341 37.037 0.00 0.00 34.66 0.86
6204 8766 9.204570 CTGTGGTTAGAAATACCCGAAATATAG 57.795 37.037 0.00 0.00 34.66 1.31
6205 8767 8.707449 TGTGGTTAGAAATACCCGAAATATAGT 58.293 33.333 0.00 0.00 34.66 2.12
6206 8768 9.201127 GTGGTTAGAAATACCCGAAATATAGTC 57.799 37.037 0.00 0.00 34.66 2.59
6207 8769 8.926374 TGGTTAGAAATACCCGAAATATAGTCA 58.074 33.333 0.00 0.00 34.66 3.41
6208 8770 9.201127 GGTTAGAAATACCCGAAATATAGTCAC 57.799 37.037 0.00 0.00 0.00 3.67
6209 8771 9.978044 GTTAGAAATACCCGAAATATAGTCACT 57.022 33.333 0.00 0.00 0.00 3.41
6216 8778 9.760077 ATACCCGAAATATAGTCACTAAACTTG 57.240 33.333 0.00 0.00 0.00 3.16
6217 8779 6.537660 ACCCGAAATATAGTCACTAAACTTGC 59.462 38.462 0.00 0.00 0.00 4.01
6218 8780 6.761714 CCCGAAATATAGTCACTAAACTTGCT 59.238 38.462 0.00 0.00 0.00 3.91
6219 8781 7.042658 CCCGAAATATAGTCACTAAACTTGCTC 60.043 40.741 0.00 0.00 0.00 4.26
6220 8782 7.707035 CCGAAATATAGTCACTAAACTTGCTCT 59.293 37.037 0.00 0.00 0.00 4.09
6221 8783 9.731819 CGAAATATAGTCACTAAACTTGCTCTA 57.268 33.333 0.00 0.00 0.00 2.43
6225 8787 5.652994 AGTCACTAAACTTGCTCTAGAGG 57.347 43.478 21.23 7.37 0.00 3.69
6226 8788 4.464597 AGTCACTAAACTTGCTCTAGAGGG 59.535 45.833 21.23 0.00 0.00 4.30
6227 8789 4.221041 GTCACTAAACTTGCTCTAGAGGGT 59.779 45.833 21.23 0.25 0.00 4.34
6228 8790 4.463186 TCACTAAACTTGCTCTAGAGGGTC 59.537 45.833 21.23 5.44 0.00 4.46
6229 8791 4.220821 CACTAAACTTGCTCTAGAGGGTCA 59.779 45.833 21.23 8.09 0.00 4.02
6230 8792 5.026790 ACTAAACTTGCTCTAGAGGGTCAT 58.973 41.667 21.23 0.00 0.00 3.06
6231 8793 4.479786 AAACTTGCTCTAGAGGGTCATC 57.520 45.455 21.23 3.99 0.00 2.92
6232 8794 3.396685 ACTTGCTCTAGAGGGTCATCT 57.603 47.619 21.23 0.00 0.00 2.90
6233 8795 4.528076 ACTTGCTCTAGAGGGTCATCTA 57.472 45.455 21.23 0.00 0.00 1.98
6234 8796 5.073437 ACTTGCTCTAGAGGGTCATCTAT 57.927 43.478 21.23 0.00 31.50 1.98
6235 8797 4.832266 ACTTGCTCTAGAGGGTCATCTATG 59.168 45.833 21.23 3.02 31.50 2.23
6236 8798 4.461450 TGCTCTAGAGGGTCATCTATGT 57.539 45.455 21.23 0.00 31.50 2.29
6237 8799 4.809193 TGCTCTAGAGGGTCATCTATGTT 58.191 43.478 21.23 0.00 31.50 2.71
6238 8800 4.830046 TGCTCTAGAGGGTCATCTATGTTC 59.170 45.833 21.23 0.00 31.50 3.18
6239 8801 4.219725 GCTCTAGAGGGTCATCTATGTTCC 59.780 50.000 21.23 0.00 31.50 3.62
6240 8802 5.389520 CTCTAGAGGGTCATCTATGTTCCA 58.610 45.833 12.27 0.00 31.50 3.53
6241 8803 5.970289 TCTAGAGGGTCATCTATGTTCCAT 58.030 41.667 0.00 3.01 31.50 3.41
6242 8804 7.103745 TCTAGAGGGTCATCTATGTTCCATA 57.896 40.000 0.00 0.00 31.50 2.74
6243 8805 7.535738 TCTAGAGGGTCATCTATGTTCCATAA 58.464 38.462 0.00 0.00 31.50 1.90
6244 8806 8.180165 TCTAGAGGGTCATCTATGTTCCATAAT 58.820 37.037 0.00 0.00 31.50 1.28
6245 8807 9.480861 CTAGAGGGTCATCTATGTTCCATAATA 57.519 37.037 0.00 0.00 31.50 0.98
6246 8808 8.140112 AGAGGGTCATCTATGTTCCATAATAC 57.860 38.462 8.35 0.00 0.00 1.89
6247 8809 6.936279 AGGGTCATCTATGTTCCATAATACG 58.064 40.000 8.35 0.00 0.00 3.06
6248 8810 6.070767 AGGGTCATCTATGTTCCATAATACGG 60.071 42.308 0.00 0.00 0.00 4.02
6249 8811 6.295688 GGGTCATCTATGTTCCATAATACGGT 60.296 42.308 0.00 0.00 0.00 4.83
6250 8812 7.159372 GGTCATCTATGTTCCATAATACGGTT 58.841 38.462 0.00 0.00 0.00 4.44
6251 8813 7.660208 GGTCATCTATGTTCCATAATACGGTTT 59.340 37.037 0.00 0.00 0.00 3.27
6252 8814 9.052759 GTCATCTATGTTCCATAATACGGTTTT 57.947 33.333 0.00 0.00 0.00 2.43
6253 8815 9.051679 TCATCTATGTTCCATAATACGGTTTTG 57.948 33.333 0.00 0.00 0.00 2.44
6254 8816 8.836413 CATCTATGTTCCATAATACGGTTTTGT 58.164 33.333 0.00 0.00 0.00 2.83
6255 8817 8.428186 TCTATGTTCCATAATACGGTTTTGTC 57.572 34.615 0.00 0.00 0.00 3.18
6256 8818 8.262227 TCTATGTTCCATAATACGGTTTTGTCT 58.738 33.333 0.00 0.00 0.00 3.41
6257 8819 9.537192 CTATGTTCCATAATACGGTTTTGTCTA 57.463 33.333 0.00 0.00 0.00 2.59
6258 8820 8.974060 ATGTTCCATAATACGGTTTTGTCTAT 57.026 30.769 0.00 0.00 0.00 1.98
6259 8821 8.203937 TGTTCCATAATACGGTTTTGTCTATG 57.796 34.615 0.00 0.00 0.00 2.23
6260 8822 7.825270 TGTTCCATAATACGGTTTTGTCTATGT 59.175 33.333 0.00 0.00 0.00 2.29
6261 8823 9.316730 GTTCCATAATACGGTTTTGTCTATGTA 57.683 33.333 0.00 0.00 0.00 2.29
6263 8825 9.701098 TCCATAATACGGTTTTGTCTATGTATC 57.299 33.333 0.00 0.00 0.00 2.24
6264 8826 8.932791 CCATAATACGGTTTTGTCTATGTATCC 58.067 37.037 0.00 0.00 0.00 2.59
6265 8827 8.644619 CATAATACGGTTTTGTCTATGTATCCG 58.355 37.037 0.00 0.00 41.95 4.18
6266 8828 3.192466 ACGGTTTTGTCTATGTATCCGC 58.808 45.455 0.00 0.00 40.25 5.54
6267 8829 3.118884 ACGGTTTTGTCTATGTATCCGCT 60.119 43.478 0.00 0.00 40.25 5.52
6268 8830 3.245284 CGGTTTTGTCTATGTATCCGCTG 59.755 47.826 0.00 0.00 0.00 5.18
6269 8831 4.439057 GGTTTTGTCTATGTATCCGCTGA 58.561 43.478 0.00 0.00 0.00 4.26
6270 8832 5.057149 GGTTTTGTCTATGTATCCGCTGAT 58.943 41.667 0.00 0.00 34.87 2.90
6271 8833 5.527582 GGTTTTGTCTATGTATCCGCTGATT 59.472 40.000 0.00 0.00 32.18 2.57
6272 8834 6.038271 GGTTTTGTCTATGTATCCGCTGATTT 59.962 38.462 0.00 0.00 32.18 2.17
6273 8835 6.603237 TTTGTCTATGTATCCGCTGATTTG 57.397 37.500 0.00 0.00 32.18 2.32
6274 8836 4.631131 TGTCTATGTATCCGCTGATTTGG 58.369 43.478 0.00 0.00 32.18 3.28
6275 8837 3.433615 GTCTATGTATCCGCTGATTTGGC 59.566 47.826 0.00 0.00 32.18 4.52
6276 8838 2.346766 ATGTATCCGCTGATTTGGCA 57.653 45.000 0.00 0.00 32.18 4.92
6277 8839 2.346766 TGTATCCGCTGATTTGGCAT 57.653 45.000 0.00 0.00 32.18 4.40
6278 8840 2.653726 TGTATCCGCTGATTTGGCATT 58.346 42.857 0.00 0.00 32.18 3.56
6279 8841 2.358582 TGTATCCGCTGATTTGGCATTG 59.641 45.455 0.00 0.00 32.18 2.82
6280 8842 0.748450 ATCCGCTGATTTGGCATTGG 59.252 50.000 0.00 0.00 0.00 3.16
6281 8843 0.611618 TCCGCTGATTTGGCATTGGT 60.612 50.000 0.00 0.00 0.00 3.67
6282 8844 0.179129 CCGCTGATTTGGCATTGGTC 60.179 55.000 0.00 0.00 0.00 4.02
6283 8845 0.527113 CGCTGATTTGGCATTGGTCA 59.473 50.000 0.00 0.00 0.00 4.02
6284 8846 1.067706 CGCTGATTTGGCATTGGTCAA 60.068 47.619 0.00 0.00 36.70 3.18
6285 8847 2.613691 GCTGATTTGGCATTGGTCAAG 58.386 47.619 0.00 0.00 40.24 3.02
6286 8848 2.028748 GCTGATTTGGCATTGGTCAAGT 60.029 45.455 0.00 0.00 40.24 3.16
6287 8849 3.581755 CTGATTTGGCATTGGTCAAGTG 58.418 45.455 0.00 0.00 40.24 3.16
6288 8850 2.299582 TGATTTGGCATTGGTCAAGTGG 59.700 45.455 0.00 0.00 40.24 4.00
6289 8851 1.786937 TTTGGCATTGGTCAAGTGGT 58.213 45.000 0.00 0.00 40.24 4.16
6290 8852 2.666272 TTGGCATTGGTCAAGTGGTA 57.334 45.000 0.00 0.00 32.69 3.25
6291 8853 1.904287 TGGCATTGGTCAAGTGGTAC 58.096 50.000 0.00 0.00 0.00 3.34
6292 8854 1.143889 TGGCATTGGTCAAGTGGTACA 59.856 47.619 0.00 0.00 0.00 2.90
6305 8867 1.890876 TGGTACACAGTGGCATTGAC 58.109 50.000 17.47 4.44 0.00 3.18
6306 8868 1.419762 TGGTACACAGTGGCATTGACT 59.580 47.619 17.47 3.43 0.00 3.41
6307 8869 1.806542 GGTACACAGTGGCATTGACTG 59.193 52.381 17.47 9.11 45.39 3.51
6308 8870 1.806542 GTACACAGTGGCATTGACTGG 59.193 52.381 17.47 5.72 44.39 4.00
6309 8871 0.473755 ACACAGTGGCATTGACTGGA 59.526 50.000 17.47 0.00 44.39 3.86
6310 8872 0.877071 CACAGTGGCATTGACTGGAC 59.123 55.000 17.47 0.00 44.39 4.02
6311 8873 0.473755 ACAGTGGCATTGACTGGACA 59.526 50.000 17.47 0.00 44.39 4.02
6312 8874 0.877071 CAGTGGCATTGACTGGACAC 59.123 55.000 3.58 0.00 37.72 3.67
6313 8875 0.603707 AGTGGCATTGACTGGACACG 60.604 55.000 0.00 0.00 34.28 4.49
6314 8876 0.884704 GTGGCATTGACTGGACACGT 60.885 55.000 0.00 0.00 0.00 4.49
6315 8877 0.602638 TGGCATTGACTGGACACGTC 60.603 55.000 0.00 0.00 0.00 4.34
6316 8878 0.602638 GGCATTGACTGGACACGTCA 60.603 55.000 0.00 0.00 39.45 4.35
6317 8879 1.442769 GCATTGACTGGACACGTCAT 58.557 50.000 0.00 0.00 40.70 3.06
6318 8880 1.394917 GCATTGACTGGACACGTCATC 59.605 52.381 0.00 0.00 40.70 2.92
6319 8881 1.655597 CATTGACTGGACACGTCATCG 59.344 52.381 0.00 0.00 40.70 3.84
6320 8882 0.955905 TTGACTGGACACGTCATCGA 59.044 50.000 0.00 0.00 40.70 3.59
6321 8883 0.955905 TGACTGGACACGTCATCGAA 59.044 50.000 0.00 0.00 36.54 3.71
6322 8884 1.338655 TGACTGGACACGTCATCGAAA 59.661 47.619 0.00 0.00 36.54 3.46
6323 8885 1.719780 GACTGGACACGTCATCGAAAC 59.280 52.381 0.00 0.00 40.62 2.78
6324 8886 1.067974 ACTGGACACGTCATCGAAACA 59.932 47.619 0.00 0.00 40.62 2.83
6325 8887 1.721389 CTGGACACGTCATCGAAACAG 59.279 52.381 0.00 0.00 40.62 3.16
6326 8888 0.438830 GGACACGTCATCGAAACAGC 59.561 55.000 0.00 0.00 40.62 4.40
6327 8889 0.091344 GACACGTCATCGAAACAGCG 59.909 55.000 0.00 0.00 40.62 5.18
6328 8890 0.596600 ACACGTCATCGAAACAGCGT 60.597 50.000 0.00 0.00 40.62 5.07
6329 8891 1.333115 CACGTCATCGAAACAGCGTA 58.667 50.000 0.00 0.00 40.62 4.42
6330 8892 1.917955 CACGTCATCGAAACAGCGTAT 59.082 47.619 0.00 0.00 40.62 3.06
6331 8893 2.344441 CACGTCATCGAAACAGCGTATT 59.656 45.455 0.00 0.00 40.62 1.89
6332 8894 2.991190 ACGTCATCGAAACAGCGTATTT 59.009 40.909 0.00 0.00 40.62 1.40
6333 8895 4.030865 CACGTCATCGAAACAGCGTATTTA 59.969 41.667 0.00 0.00 40.62 1.40
6334 8896 4.030977 ACGTCATCGAAACAGCGTATTTAC 59.969 41.667 0.00 0.00 40.62 2.01
6335 8897 4.547587 CGTCATCGAAACAGCGTATTTACC 60.548 45.833 0.00 0.00 39.71 2.85
6336 8898 3.548668 TCATCGAAACAGCGTATTTACCG 59.451 43.478 0.00 0.00 0.00 4.02
6337 8899 2.261345 TCGAAACAGCGTATTTACCGG 58.739 47.619 0.00 0.00 0.00 5.28
6338 8900 2.094803 TCGAAACAGCGTATTTACCGGA 60.095 45.455 9.46 0.00 0.00 5.14
6339 8901 2.280708 CGAAACAGCGTATTTACCGGAG 59.719 50.000 9.46 0.00 0.00 4.63
6352 8914 4.492604 CGGAGGGGTTTTCTGCAA 57.507 55.556 0.00 0.00 0.00 4.08
6353 8915 2.727103 CGGAGGGGTTTTCTGCAAA 58.273 52.632 0.00 0.00 0.00 3.68
6354 8916 1.256812 CGGAGGGGTTTTCTGCAAAT 58.743 50.000 0.00 0.00 0.00 2.32
6355 8917 1.618343 CGGAGGGGTTTTCTGCAAATT 59.382 47.619 0.00 0.00 0.00 1.82
6356 8918 2.037121 CGGAGGGGTTTTCTGCAAATTT 59.963 45.455 0.00 0.00 0.00 1.82
6357 8919 3.402110 GGAGGGGTTTTCTGCAAATTTG 58.598 45.455 14.03 14.03 0.00 2.32
6405 8967 4.966787 GGACCTGGCCGGCAACAA 62.967 66.667 30.85 9.60 35.61 2.83
6406 8968 3.670377 GACCTGGCCGGCAACAAC 61.670 66.667 30.85 11.16 35.61 3.32
6408 8970 4.974721 CCTGGCCGGCAACAACCT 62.975 66.667 30.85 0.00 32.43 3.50
6409 8971 3.365265 CTGGCCGGCAACAACCTC 61.365 66.667 30.85 8.62 32.43 3.85
6410 8972 4.196778 TGGCCGGCAACAACCTCA 62.197 61.111 30.85 11.59 32.43 3.86
6411 8973 2.909965 GGCCGGCAACAACCTCAA 60.910 61.111 30.85 0.00 0.00 3.02
6412 8974 2.335011 GCCGGCAACAACCTCAAC 59.665 61.111 24.80 0.00 0.00 3.18
6413 8975 2.637025 CCGGCAACAACCTCAACG 59.363 61.111 0.00 0.00 0.00 4.10
6414 8976 2.637025 CGGCAACAACCTCAACGG 59.363 61.111 0.00 0.00 39.35 4.44
6415 8977 2.335011 GGCAACAACCTCAACGGC 59.665 61.111 0.00 0.00 35.61 5.68
6416 8978 2.193536 GGCAACAACCTCAACGGCT 61.194 57.895 0.00 0.00 35.61 5.52
6417 8979 1.282875 GCAACAACCTCAACGGCTC 59.717 57.895 0.00 0.00 35.61 4.70
6418 8980 1.166531 GCAACAACCTCAACGGCTCT 61.167 55.000 0.00 0.00 35.61 4.09
6419 8981 1.876416 GCAACAACCTCAACGGCTCTA 60.876 52.381 0.00 0.00 35.61 2.43
6420 8982 2.699954 CAACAACCTCAACGGCTCTAT 58.300 47.619 0.00 0.00 35.61 1.98
6421 8983 2.673368 CAACAACCTCAACGGCTCTATC 59.327 50.000 0.00 0.00 35.61 2.08
6422 8984 1.207329 ACAACCTCAACGGCTCTATCC 59.793 52.381 0.00 0.00 35.61 2.59
6423 8985 0.831307 AACCTCAACGGCTCTATCCC 59.169 55.000 0.00 0.00 35.61 3.85
6424 8986 1.049289 ACCTCAACGGCTCTATCCCC 61.049 60.000 0.00 0.00 35.61 4.81
6429 8991 3.546543 CGGCTCTATCCCCGCCAA 61.547 66.667 0.00 0.00 43.95 4.52
6430 8992 2.427753 GGCTCTATCCCCGCCAAG 59.572 66.667 0.00 0.00 43.25 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.507616 GGGATCTATTGTCCCGAGATAAGATAT 59.492 40.741 0.00 0.00 45.47 1.63
1 2 6.834451 GGGATCTATTGTCCCGAGATAAGATA 59.166 42.308 0.00 0.00 45.47 1.98
2 3 5.659079 GGGATCTATTGTCCCGAGATAAGAT 59.341 44.000 0.00 0.00 45.47 2.40
45 47 1.070786 GGGAGAGAAACACGTGGCA 59.929 57.895 21.57 0.00 0.00 4.92
60 62 0.034477 GAGGGAAAATGCGAAGGGGA 60.034 55.000 0.00 0.00 0.00 4.81
90 93 3.165875 GGGAAAAGGAAAGGGAAGAAGG 58.834 50.000 0.00 0.00 0.00 3.46
114 117 1.868498 CGTTCCTTTTTACTCGTGCCA 59.132 47.619 0.00 0.00 0.00 4.92
120 123 3.130280 TCCACCCGTTCCTTTTTACTC 57.870 47.619 0.00 0.00 0.00 2.59
152 155 1.144936 CCATGAGAGAAGGGGCGAC 59.855 63.158 0.00 0.00 0.00 5.19
246 249 8.197439 TCGAGATGATAAATATGACAACACTGT 58.803 33.333 0.00 0.00 38.98 3.55
248 251 9.201127 CATCGAGATGATAAATATGACAACACT 57.799 33.333 7.26 0.00 41.20 3.55
249 252 8.982685 ACATCGAGATGATAAATATGACAACAC 58.017 33.333 18.76 0.00 41.20 3.32
254 257 9.088512 GGGTAACATCGAGATGATAAATATGAC 57.911 37.037 18.76 1.79 41.20 3.06
271 274 4.246458 GGCGATGAGATAAGGGTAACATC 58.754 47.826 0.00 0.00 39.74 3.06
275 278 3.557054 GCATGGCGATGAGATAAGGGTAA 60.557 47.826 13.46 0.00 0.00 2.85
296 299 1.947456 AGTTGAAGAACTTTGGACCGC 59.053 47.619 0.00 0.00 39.56 5.68
298 301 3.551846 TGGAGTTGAAGAACTTTGGACC 58.448 45.455 0.00 0.00 42.80 4.46
350 353 3.043713 CGACACATGGTGCGCAGT 61.044 61.111 12.22 3.12 36.98 4.40
351 354 2.733671 CTCGACACATGGTGCGCAG 61.734 63.158 12.22 0.12 36.98 5.18
367 370 5.072464 AGCCTATTCCCTGGTTAAGAATCTC 59.928 44.000 0.05 0.00 32.64 2.75
374 377 4.141251 GGATGAAGCCTATTCCCTGGTTAA 60.141 45.833 0.00 0.00 0.00 2.01
404 410 0.179076 TGATGCCACCGATAGCACAG 60.179 55.000 0.00 0.00 42.84 3.66
425 431 2.479049 GCGTCTAATGGTTGCTCGACTA 60.479 50.000 0.00 0.00 0.00 2.59
435 441 2.607187 CTTCGACTTGCGTCTAATGGT 58.393 47.619 0.00 0.00 41.80 3.55
461 1868 5.703978 AATTTTGGTCATGTCATCGTTCA 57.296 34.783 0.00 0.00 0.00 3.18
481 1888 8.043710 TGAAACCCACAATTGTCAAGTAAAAAT 58.956 29.630 8.48 0.00 0.00 1.82
482 1889 7.386851 TGAAACCCACAATTGTCAAGTAAAAA 58.613 30.769 8.48 0.00 0.00 1.94
488 1895 6.923928 ATTTTGAAACCCACAATTGTCAAG 57.076 33.333 8.48 2.78 0.00 3.02
519 1929 8.523915 AGTATTGATTTGAAGACCATTGCATA 57.476 30.769 0.00 0.00 0.00 3.14
550 1960 6.662616 CATTGCATTGCTATTGGTAGAGTAC 58.337 40.000 10.49 0.00 0.00 2.73
600 2323 5.298989 AGTACAGTAGATCTCATCGTCCT 57.701 43.478 0.00 0.00 0.00 3.85
620 2350 5.780793 ACAAGAGAACCAATGTAGGAGTAGT 59.219 40.000 0.00 0.00 0.00 2.73
621 2351 6.287589 ACAAGAGAACCAATGTAGGAGTAG 57.712 41.667 0.00 0.00 0.00 2.57
622 2352 7.069578 GGATACAAGAGAACCAATGTAGGAGTA 59.930 40.741 0.00 0.00 32.31 2.59
623 2353 6.127026 GGATACAAGAGAACCAATGTAGGAGT 60.127 42.308 0.00 0.00 32.31 3.85
624 2354 6.098982 AGGATACAAGAGAACCAATGTAGGAG 59.901 42.308 0.00 0.00 41.41 3.69
625 2355 5.964477 AGGATACAAGAGAACCAATGTAGGA 59.036 40.000 0.00 0.00 41.41 2.94
626 2356 6.240549 AGGATACAAGAGAACCAATGTAGG 57.759 41.667 0.00 0.00 41.41 3.18
627 2357 7.414540 GCAAAGGATACAAGAGAACCAATGTAG 60.415 40.741 0.00 0.00 41.41 2.74
628 2358 6.374333 GCAAAGGATACAAGAGAACCAATGTA 59.626 38.462 0.00 0.00 41.41 2.29
629 2359 5.183904 GCAAAGGATACAAGAGAACCAATGT 59.816 40.000 0.00 0.00 41.41 2.71
668 2398 5.478407 AGTGTGAAAACTTTGTCCAAAAGG 58.522 37.500 3.15 0.00 0.00 3.11
689 2429 1.533273 ACCCCTACTGCGTGTGAGT 60.533 57.895 0.00 0.00 0.00 3.41
692 2432 0.319083 TAACACCCCTACTGCGTGTG 59.681 55.000 0.00 0.00 40.50 3.82
693 2433 0.606604 CTAACACCCCTACTGCGTGT 59.393 55.000 0.00 0.00 42.38 4.49
717 2457 0.857287 GTTGTTTGGGAGACGACGAC 59.143 55.000 0.00 0.00 0.00 4.34
718 2458 0.460722 TGTTGTTTGGGAGACGACGA 59.539 50.000 0.00 0.00 34.74 4.20
719 2459 0.580104 GTGTTGTTTGGGAGACGACG 59.420 55.000 0.00 0.00 34.74 5.12
720 2460 1.949465 AGTGTTGTTTGGGAGACGAC 58.051 50.000 0.00 0.00 33.02 4.34
721 2461 2.557317 GAAGTGTTGTTTGGGAGACGA 58.443 47.619 0.00 0.00 0.00 4.20
722 2462 1.602377 GGAAGTGTTGTTTGGGAGACG 59.398 52.381 0.00 0.00 0.00 4.18
723 2463 1.954382 GGGAAGTGTTGTTTGGGAGAC 59.046 52.381 0.00 0.00 0.00 3.36
733 2476 0.310854 GGCGTGAAAGGGAAGTGTTG 59.689 55.000 0.00 0.00 0.00 3.33
809 2731 4.324874 GGTGAGTACAGTAGGAAGAGGGTA 60.325 50.000 0.00 0.00 0.00 3.69
907 2833 4.388499 GAGTTTGGGCGCGAGGGA 62.388 66.667 12.10 0.00 0.00 4.20
1115 3053 1.084935 CGAGACGGAGAGAAGAGCGA 61.085 60.000 0.00 0.00 0.00 4.93
1116 3054 1.350319 CGAGACGGAGAGAAGAGCG 59.650 63.158 0.00 0.00 0.00 5.03
1156 3096 5.119125 CCAAAATTAGGAAAGCGCAAAAGAG 59.881 40.000 11.47 0.00 0.00 2.85
1158 3098 4.152223 CCCAAAATTAGGAAAGCGCAAAAG 59.848 41.667 11.47 0.00 0.00 2.27
1159 3099 4.061596 CCCAAAATTAGGAAAGCGCAAAA 58.938 39.130 11.47 0.00 0.00 2.44
1169 3109 3.699038 CAGCGGAAATCCCAAAATTAGGA 59.301 43.478 0.00 0.00 36.36 2.94
1232 3176 2.036604 GCCGAATCAAAAAGGGGAACAA 59.963 45.455 0.00 0.00 0.00 2.83
1261 3205 1.305219 CGCCCAAAATCGCCTCTCAA 61.305 55.000 0.00 0.00 0.00 3.02
1262 3206 1.745115 CGCCCAAAATCGCCTCTCA 60.745 57.895 0.00 0.00 0.00 3.27
1267 3211 1.006688 AAACACGCCCAAAATCGCC 60.007 52.632 0.00 0.00 0.00 5.54
1379 3323 9.981114 AAAAATAAAGTAACATGTTGGAAGGAG 57.019 29.630 21.42 0.00 0.00 3.69
1410 3360 6.096987 ACTCGAAGGCAATCTAAGAGTATTCA 59.903 38.462 0.00 0.00 39.16 2.57
1411 3361 6.508777 ACTCGAAGGCAATCTAAGAGTATTC 58.491 40.000 0.00 0.00 39.16 1.75
1412 3362 6.472686 ACTCGAAGGCAATCTAAGAGTATT 57.527 37.500 0.00 0.00 39.16 1.89
1463 3413 4.795278 CAGAAAGCAATTTAACCATCGAGC 59.205 41.667 0.00 0.00 0.00 5.03
1598 3548 5.335348 GCCGTGGTTAATTTGAGAAAGCTTA 60.335 40.000 0.00 0.00 0.00 3.09
1625 3575 7.639113 ATGACTGTCCAACTACAAAAGAAAA 57.361 32.000 5.17 0.00 0.00 2.29
1734 3684 9.869757 AAATGCTATAACACCAGAAATTTTACC 57.130 29.630 0.00 0.00 0.00 2.85
1954 3905 3.853831 TTGATGCCACAGTGCTTAATG 57.146 42.857 0.00 0.00 0.00 1.90
2045 3996 5.527033 CGCTCTTCTTCATGTCATATGAGA 58.473 41.667 5.42 5.12 0.00 3.27
2055 4006 1.931906 TAGCAGCGCTCTTCTTCATG 58.068 50.000 7.13 0.00 40.44 3.07
2056 4007 2.906691 ATAGCAGCGCTCTTCTTCAT 57.093 45.000 7.13 0.00 40.44 2.57
2057 4008 2.541794 CGTATAGCAGCGCTCTTCTTCA 60.542 50.000 7.13 0.00 40.44 3.02
2058 4009 2.047769 CGTATAGCAGCGCTCTTCTTC 58.952 52.381 7.13 0.00 40.44 2.87
2059 4010 1.405821 ACGTATAGCAGCGCTCTTCTT 59.594 47.619 7.13 0.00 40.44 2.52
2060 4011 1.025812 ACGTATAGCAGCGCTCTTCT 58.974 50.000 7.13 7.84 40.44 2.85
2061 4012 2.308811 GTACGTATAGCAGCGCTCTTC 58.691 52.381 7.13 0.00 40.44 2.87
2062 4013 1.333881 CGTACGTATAGCAGCGCTCTT 60.334 52.381 7.13 0.00 40.44 2.85
2063 4014 0.235144 CGTACGTATAGCAGCGCTCT 59.765 55.000 7.13 10.92 40.44 4.09
2064 4015 0.234106 TCGTACGTATAGCAGCGCTC 59.766 55.000 16.05 2.24 40.44 5.03
2065 4016 0.873054 ATCGTACGTATAGCAGCGCT 59.127 50.000 16.05 2.64 43.41 5.92
2066 4017 1.248721 GATCGTACGTATAGCAGCGC 58.751 55.000 16.05 0.00 0.00 5.92
2067 4018 2.589338 TGATCGTACGTATAGCAGCG 57.411 50.000 16.05 0.00 0.00 5.18
2068 4019 4.288531 AGTTTGATCGTACGTATAGCAGC 58.711 43.478 16.05 0.00 0.00 5.25
2069 4020 5.969435 TGAAGTTTGATCGTACGTATAGCAG 59.031 40.000 16.05 0.00 0.00 4.24
2070 4021 5.882553 TGAAGTTTGATCGTACGTATAGCA 58.117 37.500 16.05 1.77 0.00 3.49
2071 4022 6.988109 ATGAAGTTTGATCGTACGTATAGC 57.012 37.500 16.05 0.00 0.00 2.97
2078 4029 7.162062 GCAAAATCGTATGAAGTTTGATCGTAC 59.838 37.037 20.55 0.00 36.22 3.67
2079 4030 7.177407 GCAAAATCGTATGAAGTTTGATCGTA 58.823 34.615 20.55 0.00 36.22 3.43
2080 4031 6.021596 GCAAAATCGTATGAAGTTTGATCGT 58.978 36.000 20.55 0.00 36.22 3.73
2081 4032 5.167803 CGCAAAATCGTATGAAGTTTGATCG 59.832 40.000 20.55 14.27 36.22 3.69
2082 4033 6.021596 ACGCAAAATCGTATGAAGTTTGATC 58.978 36.000 20.55 8.94 41.36 2.92
2083 4034 5.938322 ACGCAAAATCGTATGAAGTTTGAT 58.062 33.333 20.55 10.16 41.36 2.57
2084 4035 5.351233 ACGCAAAATCGTATGAAGTTTGA 57.649 34.783 20.55 0.00 41.36 2.69
2085 4036 6.520449 GTACGCAAAATCGTATGAAGTTTG 57.480 37.500 15.32 15.32 45.16 2.93
2093 4044 2.532235 TGCTCGTACGCAAAATCGTAT 58.468 42.857 11.24 0.00 45.16 3.06
2094 4045 1.915350 CTGCTCGTACGCAAAATCGTA 59.085 47.619 11.24 0.00 43.15 3.43
2095 4046 0.713883 CTGCTCGTACGCAAAATCGT 59.286 50.000 11.24 0.00 45.49 3.73
2096 4047 0.989164 TCTGCTCGTACGCAAAATCG 59.011 50.000 11.24 0.00 39.80 3.34
2097 4048 1.993370 AGTCTGCTCGTACGCAAAATC 59.007 47.619 11.24 0.00 39.80 2.17
2098 4049 1.726791 CAGTCTGCTCGTACGCAAAAT 59.273 47.619 11.24 0.00 39.80 1.82
2099 4050 1.136690 CAGTCTGCTCGTACGCAAAA 58.863 50.000 11.24 0.00 39.80 2.44
2100 4051 0.031585 ACAGTCTGCTCGTACGCAAA 59.968 50.000 11.24 0.00 39.80 3.68
2101 4052 0.031585 AACAGTCTGCTCGTACGCAA 59.968 50.000 11.24 0.00 39.80 4.85
2102 4053 0.386858 GAACAGTCTGCTCGTACGCA 60.387 55.000 11.24 2.48 38.40 5.24
2103 4054 0.109689 AGAACAGTCTGCTCGTACGC 60.110 55.000 11.24 0.00 30.83 4.42
2104 4055 1.607713 CAGAACAGTCTGCTCGTACG 58.392 55.000 9.53 9.53 44.74 3.67
2117 4068 1.758592 GGCCCACTGTACCAGAACA 59.241 57.895 0.00 0.00 35.18 3.18
2118 4069 1.002502 GGGCCCACTGTACCAGAAC 60.003 63.158 19.95 0.00 35.18 3.01
2119 4070 2.589157 CGGGCCCACTGTACCAGAA 61.589 63.158 24.92 0.00 35.18 3.02
2120 4071 3.000819 CGGGCCCACTGTACCAGA 61.001 66.667 24.92 0.00 35.18 3.86
2121 4072 2.589157 TTCGGGCCCACTGTACCAG 61.589 63.158 24.92 1.11 37.52 4.00
2122 4073 2.527123 TTCGGGCCCACTGTACCA 60.527 61.111 24.92 0.00 0.00 3.25
2123 4074 2.046604 GTTCGGGCCCACTGTACC 60.047 66.667 24.92 0.00 0.00 3.34
2124 4075 2.433664 CGTTCGGGCCCACTGTAC 60.434 66.667 24.92 8.74 0.00 2.90
2125 4076 2.509651 AACGTTCGGGCCCACTGTA 61.510 57.895 24.92 0.00 0.00 2.74
2126 4077 3.868985 AACGTTCGGGCCCACTGT 61.869 61.111 24.92 11.59 0.00 3.55
2127 4078 3.353836 CAACGTTCGGGCCCACTG 61.354 66.667 24.92 10.85 0.00 3.66
2128 4079 4.636435 CCAACGTTCGGGCCCACT 62.636 66.667 24.92 0.37 0.00 4.00
2131 4082 4.646877 TTCCCAACGTTCGGGCCC 62.647 66.667 23.33 13.57 44.11 5.80
2132 4083 3.359523 GTTCCCAACGTTCGGGCC 61.360 66.667 23.33 15.47 44.11 5.80
2141 4092 0.942252 GACACAGGTTCGTTCCCAAC 59.058 55.000 0.00 0.00 0.00 3.77
2142 4093 0.834612 AGACACAGGTTCGTTCCCAA 59.165 50.000 0.00 0.00 0.00 4.12
2143 4094 0.834612 AAGACACAGGTTCGTTCCCA 59.165 50.000 0.00 0.00 0.00 4.37
2144 4095 1.226746 CAAGACACAGGTTCGTTCCC 58.773 55.000 0.00 0.00 0.00 3.97
2145 4096 1.865340 GACAAGACACAGGTTCGTTCC 59.135 52.381 0.00 0.00 0.00 3.62
2146 4097 1.521423 CGACAAGACACAGGTTCGTTC 59.479 52.381 0.00 0.00 0.00 3.95
2147 4098 1.134907 ACGACAAGACACAGGTTCGTT 60.135 47.619 0.00 0.00 0.00 3.85
2148 4099 0.458669 ACGACAAGACACAGGTTCGT 59.541 50.000 0.00 0.00 0.00 3.85
2149 4100 2.049228 GTACGACAAGACACAGGTTCG 58.951 52.381 0.00 0.00 0.00 3.95
2150 4101 3.088194 TGTACGACAAGACACAGGTTC 57.912 47.619 0.00 0.00 0.00 3.62
2151 4102 3.530265 TTGTACGACAAGACACAGGTT 57.470 42.857 0.00 0.00 32.34 3.50
2152 4103 3.530265 TTTGTACGACAAGACACAGGT 57.470 42.857 0.00 0.00 39.53 4.00
2153 4104 4.376008 CGATTTTGTACGACAAGACACAGG 60.376 45.833 0.00 0.00 39.53 4.00
2154 4105 4.208460 ACGATTTTGTACGACAAGACACAG 59.792 41.667 0.00 0.00 39.53 3.66
2155 4106 4.114073 ACGATTTTGTACGACAAGACACA 58.886 39.130 0.00 0.00 39.53 3.72
2156 4107 4.703899 ACGATTTTGTACGACAAGACAC 57.296 40.909 0.00 0.00 39.53 3.67
2157 4108 5.346551 CCATACGATTTTGTACGACAAGACA 59.653 40.000 0.00 0.00 39.53 3.41
2158 4109 5.220340 CCCATACGATTTTGTACGACAAGAC 60.220 44.000 0.00 0.00 39.53 3.01
2159 4110 4.865925 CCCATACGATTTTGTACGACAAGA 59.134 41.667 0.00 0.00 39.53 3.02
2160 4111 4.033587 CCCCATACGATTTTGTACGACAAG 59.966 45.833 0.00 0.00 39.53 3.16
2161 4112 3.933955 CCCCATACGATTTTGTACGACAA 59.066 43.478 0.00 0.00 36.11 3.18
2162 4113 3.195182 TCCCCATACGATTTTGTACGACA 59.805 43.478 0.00 0.00 0.00 4.35
2163 4114 3.784338 TCCCCATACGATTTTGTACGAC 58.216 45.455 0.00 0.00 0.00 4.34
2164 4115 4.468765 TTCCCCATACGATTTTGTACGA 57.531 40.909 0.00 0.00 0.00 3.43
2165 4116 5.548706 TTTTCCCCATACGATTTTGTACG 57.451 39.130 0.00 0.00 0.00 3.67
2166 4117 8.013378 CGATATTTTCCCCATACGATTTTGTAC 58.987 37.037 0.00 0.00 0.00 2.90
2167 4118 7.716123 ACGATATTTTCCCCATACGATTTTGTA 59.284 33.333 0.00 0.00 0.00 2.41
2168 4119 6.544564 ACGATATTTTCCCCATACGATTTTGT 59.455 34.615 0.00 0.00 0.00 2.83
2169 4120 6.966021 ACGATATTTTCCCCATACGATTTTG 58.034 36.000 0.00 0.00 0.00 2.44
2170 4121 7.095523 CGTACGATATTTTCCCCATACGATTTT 60.096 37.037 10.44 0.00 37.04 1.82
2171 4122 6.366877 CGTACGATATTTTCCCCATACGATTT 59.633 38.462 10.44 0.00 37.04 2.17
2172 4123 5.865552 CGTACGATATTTTCCCCATACGATT 59.134 40.000 10.44 0.00 37.04 3.34
2173 4124 5.404946 CGTACGATATTTTCCCCATACGAT 58.595 41.667 10.44 0.00 37.04 3.73
2174 4125 4.797471 CGTACGATATTTTCCCCATACGA 58.203 43.478 10.44 0.00 37.04 3.43
2175 4126 3.365820 GCGTACGATATTTTCCCCATACG 59.634 47.826 21.65 0.00 37.73 3.06
2176 4127 4.309099 TGCGTACGATATTTTCCCCATAC 58.691 43.478 21.65 0.00 0.00 2.39
2177 4128 4.603989 TGCGTACGATATTTTCCCCATA 57.396 40.909 21.65 0.00 0.00 2.74
2178 4129 3.478857 TGCGTACGATATTTTCCCCAT 57.521 42.857 21.65 0.00 0.00 4.00
2179 4130 2.983907 TGCGTACGATATTTTCCCCA 57.016 45.000 21.65 0.00 0.00 4.96
2180 4131 2.546789 CCTTGCGTACGATATTTTCCCC 59.453 50.000 21.65 0.00 0.00 4.81
2181 4132 2.032290 GCCTTGCGTACGATATTTTCCC 60.032 50.000 21.65 0.00 0.00 3.97
2182 4133 2.610374 TGCCTTGCGTACGATATTTTCC 59.390 45.455 21.65 0.00 0.00 3.13
2183 4134 3.308866 ACTGCCTTGCGTACGATATTTTC 59.691 43.478 21.65 0.00 0.00 2.29
2184 4135 3.267483 ACTGCCTTGCGTACGATATTTT 58.733 40.909 21.65 0.00 0.00 1.82
2185 4136 2.901249 ACTGCCTTGCGTACGATATTT 58.099 42.857 21.65 0.00 0.00 1.40
2186 4137 2.596904 ACTGCCTTGCGTACGATATT 57.403 45.000 21.65 0.00 0.00 1.28
2187 4138 2.596904 AACTGCCTTGCGTACGATAT 57.403 45.000 21.65 0.00 0.00 1.63
2188 4139 2.264813 GAAACTGCCTTGCGTACGATA 58.735 47.619 21.65 3.69 0.00 2.92
2189 4140 1.076332 GAAACTGCCTTGCGTACGAT 58.924 50.000 21.65 0.00 0.00 3.73
2190 4141 1.279527 CGAAACTGCCTTGCGTACGA 61.280 55.000 21.65 0.80 0.00 3.43
2191 4142 1.129809 CGAAACTGCCTTGCGTACG 59.870 57.895 11.84 11.84 0.00 3.67
2192 4143 1.154469 GCGAAACTGCCTTGCGTAC 60.154 57.895 0.00 0.00 0.00 3.67
2193 4144 0.953471 ATGCGAAACTGCCTTGCGTA 60.953 50.000 0.00 0.00 0.00 4.42
2194 4145 2.260869 ATGCGAAACTGCCTTGCGT 61.261 52.632 0.00 0.00 0.00 5.24
2195 4146 1.798725 CATGCGAAACTGCCTTGCG 60.799 57.895 0.00 0.00 0.00 4.85
2196 4147 0.039256 TTCATGCGAAACTGCCTTGC 60.039 50.000 0.00 0.00 0.00 4.01
2197 4148 1.536766 TCTTCATGCGAAACTGCCTTG 59.463 47.619 0.00 0.00 0.00 3.61
2198 4149 1.896220 TCTTCATGCGAAACTGCCTT 58.104 45.000 0.00 0.00 0.00 4.35
2199 4150 1.896220 TTCTTCATGCGAAACTGCCT 58.104 45.000 0.00 0.00 0.00 4.75
2200 4151 2.589014 CTTTCTTCATGCGAAACTGCC 58.411 47.619 6.07 0.00 0.00 4.85
2201 4152 2.589014 CCTTTCTTCATGCGAAACTGC 58.411 47.619 6.07 0.00 0.00 4.40
2202 4153 2.095059 CCCCTTTCTTCATGCGAAACTG 60.095 50.000 6.07 2.44 0.00 3.16
2203 4154 2.162681 CCCCTTTCTTCATGCGAAACT 58.837 47.619 6.07 0.00 0.00 2.66
2204 4155 1.886542 ACCCCTTTCTTCATGCGAAAC 59.113 47.619 6.07 0.00 0.00 2.78
2205 4156 2.286365 ACCCCTTTCTTCATGCGAAA 57.714 45.000 8.91 8.91 0.00 3.46
2206 4157 1.885887 CAACCCCTTTCTTCATGCGAA 59.114 47.619 0.00 0.00 0.00 4.70
2207 4158 1.533625 CAACCCCTTTCTTCATGCGA 58.466 50.000 0.00 0.00 0.00 5.10
2208 4159 0.527565 CCAACCCCTTTCTTCATGCG 59.472 55.000 0.00 0.00 0.00 4.73
2209 4160 1.821136 CTCCAACCCCTTTCTTCATGC 59.179 52.381 0.00 0.00 0.00 4.06
2248 4199 7.573968 ATTATTTGTCCTTTCTAGTCCATGC 57.426 36.000 0.00 0.00 0.00 4.06
2722 4675 3.893813 GCCTTATAAACCGGTAGAGAGGA 59.106 47.826 21.36 1.66 0.00 3.71
2851 5390 7.290118 GCCAATTTGACAAACATATCACAAAC 58.710 34.615 1.94 0.00 31.77 2.93
2861 5403 4.155826 CCTAGATCGCCAATTTGACAAACA 59.844 41.667 1.94 0.00 0.00 2.83
2869 5411 4.642429 GTGTATCCCTAGATCGCCAATTT 58.358 43.478 0.00 0.00 33.67 1.82
3018 5560 7.690454 TTCCTCCAATAGTTCATCATCCTTA 57.310 36.000 0.00 0.00 0.00 2.69
3090 5632 1.883638 GCACATGTGACACCACCAGAT 60.884 52.381 29.80 0.00 42.53 2.90
3099 5641 1.148949 AGGTGCAGCACATGTGACA 59.851 52.632 29.80 19.47 35.86 3.58
3208 5750 1.952296 AGCTGGTTGCAGAAAGAACAG 59.048 47.619 0.00 0.00 45.94 3.16
3239 5781 4.093556 GGTGCTAAGTTCTCCTTGAAATCG 59.906 45.833 0.00 0.00 36.30 3.34
3271 5813 3.858503 GCTCTTTTGCTGTCCAAATGACC 60.859 47.826 0.00 0.00 42.63 4.02
3298 5840 0.744771 GGGTTGCCGAGAATCCTGTC 60.745 60.000 0.00 0.00 0.00 3.51
3810 6353 7.042725 GGATCAACAATTAAATCGTCGAGATCA 60.043 37.037 0.00 0.00 38.98 2.92
3909 6452 4.342862 TCAATAGCTGAGGCCATAGAAC 57.657 45.455 5.01 0.00 39.73 3.01
3979 6522 4.464008 TCCATTATTTGATCAGGAGCCAC 58.536 43.478 0.00 0.00 0.00 5.01
4363 6906 5.058149 TGTTAGCATGCAAAACTGTATGG 57.942 39.130 26.46 0.00 33.45 2.74
4528 7071 1.734465 GGTGTTTCTGCATCTCCTTCG 59.266 52.381 0.00 0.00 0.00 3.79
4951 7494 1.792993 GCATCTGCGTTAGCTTGCAAG 60.793 52.381 22.44 22.44 45.42 4.01
5107 7650 1.889573 GGTGCTGCTATCTTCGGGC 60.890 63.158 0.00 0.00 0.00 6.13
5432 7981 8.677148 ATTTGCATCGAACATATATATACCCC 57.323 34.615 0.00 0.00 0.00 4.95
5636 8186 3.243771 ACAACCAACGACAACAAACCAAA 60.244 39.130 0.00 0.00 0.00 3.28
5826 8376 2.572191 AGAAAGTCGTCACGTCACAA 57.428 45.000 0.00 0.00 0.00 3.33
6033 8595 1.548582 CCAAGGCACTCCAAATGTCCT 60.549 52.381 0.00 0.00 38.49 3.85
6036 8598 2.610438 ATCCAAGGCACTCCAAATGT 57.390 45.000 0.00 0.00 38.49 2.71
6092 8654 0.328592 ACACTCCTACGAGGCTCTGA 59.671 55.000 13.50 3.10 40.77 3.27
6093 8655 1.178276 AACACTCCTACGAGGCTCTG 58.822 55.000 13.50 8.77 40.77 3.35
6094 8656 1.546476 CAAACACTCCTACGAGGCTCT 59.454 52.381 13.50 2.35 40.77 4.09
6095 8657 1.404315 CCAAACACTCCTACGAGGCTC 60.404 57.143 3.87 3.87 40.77 4.70
6096 8658 0.608640 CCAAACACTCCTACGAGGCT 59.391 55.000 0.00 0.00 40.77 4.58
6097 8659 0.320697 ACCAAACACTCCTACGAGGC 59.679 55.000 0.00 0.00 40.77 4.70
6098 8660 2.833631 AACCAAACACTCCTACGAGG 57.166 50.000 0.00 0.00 40.77 4.63
6099 8661 6.796705 ATAAAAACCAAACACTCCTACGAG 57.203 37.500 0.00 0.00 42.32 4.18
6131 8693 8.616076 GCAAGTTATATGCTCTGTAGTGAATTT 58.384 33.333 0.00 0.00 40.64 1.82
6132 8694 7.042456 CGCAAGTTATATGCTCTGTAGTGAATT 60.042 37.037 0.00 0.00 41.64 2.17
6133 8695 6.422100 CGCAAGTTATATGCTCTGTAGTGAAT 59.578 38.462 0.00 0.00 41.64 2.57
6134 8696 5.748630 CGCAAGTTATATGCTCTGTAGTGAA 59.251 40.000 0.00 0.00 41.64 3.18
6135 8697 5.281727 CGCAAGTTATATGCTCTGTAGTGA 58.718 41.667 0.00 0.00 41.64 3.41
6136 8698 4.084849 GCGCAAGTTATATGCTCTGTAGTG 60.085 45.833 0.30 0.00 41.64 2.74
6137 8699 4.051922 GCGCAAGTTATATGCTCTGTAGT 58.948 43.478 0.30 0.00 41.64 2.73
6138 8700 4.149571 CAGCGCAAGTTATATGCTCTGTAG 59.850 45.833 11.47 0.00 46.34 2.74
6139 8701 4.051237 CAGCGCAAGTTATATGCTCTGTA 58.949 43.478 11.47 0.00 46.34 2.74
6140 8702 2.868583 CAGCGCAAGTTATATGCTCTGT 59.131 45.455 11.47 0.00 46.34 3.41
6141 8703 3.516681 CAGCGCAAGTTATATGCTCTG 57.483 47.619 11.47 4.38 46.32 3.35
6142 8704 2.158900 ACCAGCGCAAGTTATATGCTCT 60.159 45.455 11.47 0.00 39.29 4.09
6143 8705 2.032549 CACCAGCGCAAGTTATATGCTC 60.033 50.000 11.47 0.00 41.64 4.26
6144 8706 1.942657 CACCAGCGCAAGTTATATGCT 59.057 47.619 11.47 0.00 41.64 3.79
6145 8707 1.002468 CCACCAGCGCAAGTTATATGC 60.002 52.381 11.47 0.00 40.41 3.14
6146 8708 1.002468 GCCACCAGCGCAAGTTATATG 60.002 52.381 11.47 0.00 41.68 1.78
6147 8709 1.308998 GCCACCAGCGCAAGTTATAT 58.691 50.000 11.47 0.00 41.68 0.86
6148 8710 0.746563 GGCCACCAGCGCAAGTTATA 60.747 55.000 11.47 0.00 45.17 0.98
6149 8711 2.046285 GGCCACCAGCGCAAGTTAT 61.046 57.895 11.47 0.00 45.17 1.89
6150 8712 2.671619 GGCCACCAGCGCAAGTTA 60.672 61.111 11.47 0.00 45.17 2.24
6151 8713 4.892965 TGGCCACCAGCGCAAGTT 62.893 61.111 11.47 0.00 45.17 2.66
6154 8716 4.892965 AAGTGGCCACCAGCGCAA 62.893 61.111 32.29 0.00 45.17 4.85
6157 8719 3.052082 CTGAAGTGGCCACCAGCG 61.052 66.667 32.29 14.83 45.17 5.18
6158 8720 1.968540 GACTGAAGTGGCCACCAGC 60.969 63.158 30.83 22.61 42.60 4.85
6159 8721 1.669115 CGACTGAAGTGGCCACCAG 60.669 63.158 32.29 30.84 32.34 4.00
6160 8722 2.425592 CGACTGAAGTGGCCACCA 59.574 61.111 32.29 22.04 0.00 4.17
6161 8723 3.050275 GCGACTGAAGTGGCCACC 61.050 66.667 32.29 18.42 42.77 4.61
6166 8728 3.957260 CCACAGCGACTGAAGTGG 58.043 61.111 12.77 7.08 44.72 4.00
6167 8729 2.061773 CTAACCACAGCGACTGAAGTG 58.938 52.381 12.77 2.47 35.18 3.16
6168 8730 1.961394 TCTAACCACAGCGACTGAAGT 59.039 47.619 12.77 7.11 35.18 3.01
6169 8731 2.724977 TCTAACCACAGCGACTGAAG 57.275 50.000 12.77 6.60 35.18 3.02
6170 8732 3.462483 TTTCTAACCACAGCGACTGAA 57.538 42.857 12.77 0.00 35.18 3.02
6171 8733 3.678056 ATTTCTAACCACAGCGACTGA 57.322 42.857 12.77 0.00 35.18 3.41
6172 8734 3.617263 GGTATTTCTAACCACAGCGACTG 59.383 47.826 5.47 5.47 36.96 3.51
6173 8735 3.369157 GGGTATTTCTAACCACAGCGACT 60.369 47.826 0.00 0.00 38.87 4.18
6174 8736 2.934553 GGGTATTTCTAACCACAGCGAC 59.065 50.000 0.00 0.00 38.87 5.19
6175 8737 2.417651 CGGGTATTTCTAACCACAGCGA 60.418 50.000 0.00 0.00 38.87 4.93
6176 8738 1.931172 CGGGTATTTCTAACCACAGCG 59.069 52.381 0.00 0.00 38.87 5.18
6177 8739 3.255969 TCGGGTATTTCTAACCACAGC 57.744 47.619 0.00 0.00 38.87 4.40
6178 8740 9.204570 CTATATTTCGGGTATTTCTAACCACAG 57.795 37.037 0.00 0.00 38.87 3.66
6179 8741 8.707449 ACTATATTTCGGGTATTTCTAACCACA 58.293 33.333 0.00 0.00 38.87 4.17
6180 8742 9.201127 GACTATATTTCGGGTATTTCTAACCAC 57.799 37.037 0.00 0.00 38.87 4.16
6181 8743 8.926374 TGACTATATTTCGGGTATTTCTAACCA 58.074 33.333 0.00 0.00 38.87 3.67
6182 8744 9.201127 GTGACTATATTTCGGGTATTTCTAACC 57.799 37.037 0.00 0.00 36.19 2.85
6183 8745 9.978044 AGTGACTATATTTCGGGTATTTCTAAC 57.022 33.333 0.00 0.00 0.00 2.34
6190 8752 9.760077 CAAGTTTAGTGACTATATTTCGGGTAT 57.240 33.333 0.00 0.00 0.00 2.73
6191 8753 7.707893 GCAAGTTTAGTGACTATATTTCGGGTA 59.292 37.037 0.00 0.00 0.00 3.69
6192 8754 6.537660 GCAAGTTTAGTGACTATATTTCGGGT 59.462 38.462 0.00 0.00 0.00 5.28
6193 8755 6.761714 AGCAAGTTTAGTGACTATATTTCGGG 59.238 38.462 0.00 0.00 0.00 5.14
6194 8756 7.707035 AGAGCAAGTTTAGTGACTATATTTCGG 59.293 37.037 0.00 0.00 0.00 4.30
6195 8757 8.635877 AGAGCAAGTTTAGTGACTATATTTCG 57.364 34.615 0.00 0.00 0.00 3.46
6199 8761 9.073475 CCTCTAGAGCAAGTTTAGTGACTATAT 57.927 37.037 14.73 0.00 0.00 0.86
6200 8762 7.502895 CCCTCTAGAGCAAGTTTAGTGACTATA 59.497 40.741 14.73 0.00 0.00 1.31
6201 8763 6.322712 CCCTCTAGAGCAAGTTTAGTGACTAT 59.677 42.308 14.73 0.00 0.00 2.12
6202 8764 5.652891 CCCTCTAGAGCAAGTTTAGTGACTA 59.347 44.000 14.73 0.00 0.00 2.59
6203 8765 4.464597 CCCTCTAGAGCAAGTTTAGTGACT 59.535 45.833 14.73 0.00 0.00 3.41
6204 8766 4.221041 ACCCTCTAGAGCAAGTTTAGTGAC 59.779 45.833 14.73 0.00 0.00 3.67
6205 8767 4.417437 ACCCTCTAGAGCAAGTTTAGTGA 58.583 43.478 14.73 0.00 0.00 3.41
6206 8768 4.220821 TGACCCTCTAGAGCAAGTTTAGTG 59.779 45.833 14.73 0.00 0.00 2.74
6207 8769 4.417437 TGACCCTCTAGAGCAAGTTTAGT 58.583 43.478 14.73 1.13 0.00 2.24
6208 8770 5.362430 AGATGACCCTCTAGAGCAAGTTTAG 59.638 44.000 14.73 0.00 0.00 1.85
6209 8771 5.273208 AGATGACCCTCTAGAGCAAGTTTA 58.727 41.667 14.73 5.48 0.00 2.01
6210 8772 4.100373 AGATGACCCTCTAGAGCAAGTTT 58.900 43.478 14.73 3.68 0.00 2.66
6211 8773 3.718723 AGATGACCCTCTAGAGCAAGTT 58.281 45.455 14.73 0.00 0.00 2.66
6212 8774 3.396685 AGATGACCCTCTAGAGCAAGT 57.603 47.619 14.73 10.75 0.00 3.16
6213 8775 4.832266 ACATAGATGACCCTCTAGAGCAAG 59.168 45.833 14.73 7.59 31.50 4.01
6214 8776 4.809193 ACATAGATGACCCTCTAGAGCAA 58.191 43.478 14.73 0.00 31.50 3.91
6215 8777 4.461450 ACATAGATGACCCTCTAGAGCA 57.539 45.455 14.73 7.59 31.50 4.26
6216 8778 4.219725 GGAACATAGATGACCCTCTAGAGC 59.780 50.000 14.73 1.51 31.50 4.09
6217 8779 5.389520 TGGAACATAGATGACCCTCTAGAG 58.610 45.833 13.18 13.18 31.50 2.43
6218 8780 5.403558 TGGAACATAGATGACCCTCTAGA 57.596 43.478 0.00 0.00 31.50 2.43
6235 8797 8.205131 ACATAGACAAAACCGTATTATGGAAC 57.795 34.615 8.97 0.00 0.00 3.62
6237 8799 9.701098 GATACATAGACAAAACCGTATTATGGA 57.299 33.333 8.97 0.00 0.00 3.41
6238 8800 8.932791 GGATACATAGACAAAACCGTATTATGG 58.067 37.037 0.08 0.08 0.00 2.74
6239 8801 8.644619 CGGATACATAGACAAAACCGTATTATG 58.355 37.037 0.00 0.00 35.40 1.90
6240 8802 7.330208 GCGGATACATAGACAAAACCGTATTAT 59.670 37.037 0.00 0.00 40.95 1.28
6241 8803 6.642131 GCGGATACATAGACAAAACCGTATTA 59.358 38.462 0.00 0.00 40.95 0.98
6242 8804 5.464389 GCGGATACATAGACAAAACCGTATT 59.536 40.000 0.00 0.00 40.95 1.89
6243 8805 4.986659 GCGGATACATAGACAAAACCGTAT 59.013 41.667 0.00 0.00 40.95 3.06
6244 8806 4.098349 AGCGGATACATAGACAAAACCGTA 59.902 41.667 0.00 0.00 40.95 4.02
6245 8807 3.118884 AGCGGATACATAGACAAAACCGT 60.119 43.478 0.00 0.00 40.95 4.83
6246 8808 3.245284 CAGCGGATACATAGACAAAACCG 59.755 47.826 0.00 0.00 41.63 4.44
6247 8809 4.439057 TCAGCGGATACATAGACAAAACC 58.561 43.478 0.00 0.00 0.00 3.27
6248 8810 6.604735 AATCAGCGGATACATAGACAAAAC 57.395 37.500 0.00 0.00 32.09 2.43
6249 8811 6.038161 CCAAATCAGCGGATACATAGACAAAA 59.962 38.462 0.00 0.00 32.09 2.44
6250 8812 5.527214 CCAAATCAGCGGATACATAGACAAA 59.473 40.000 0.00 0.00 32.09 2.83
6251 8813 5.056480 CCAAATCAGCGGATACATAGACAA 58.944 41.667 0.00 0.00 32.09 3.18
6252 8814 4.631131 CCAAATCAGCGGATACATAGACA 58.369 43.478 0.00 0.00 32.09 3.41
6253 8815 3.433615 GCCAAATCAGCGGATACATAGAC 59.566 47.826 0.00 0.00 32.09 2.59
6254 8816 3.070878 TGCCAAATCAGCGGATACATAGA 59.929 43.478 0.00 0.00 32.09 1.98
6255 8817 3.402110 TGCCAAATCAGCGGATACATAG 58.598 45.455 0.00 0.00 32.09 2.23
6256 8818 3.483808 TGCCAAATCAGCGGATACATA 57.516 42.857 0.00 0.00 32.09 2.29
6257 8819 2.346766 TGCCAAATCAGCGGATACAT 57.653 45.000 0.00 0.00 32.09 2.29
6258 8820 2.346766 ATGCCAAATCAGCGGATACA 57.653 45.000 0.00 0.00 32.09 2.29
6259 8821 2.287788 CCAATGCCAAATCAGCGGATAC 60.288 50.000 0.00 0.00 32.09 2.24
6260 8822 1.955778 CCAATGCCAAATCAGCGGATA 59.044 47.619 0.00 0.00 32.09 2.59
6261 8823 0.748450 CCAATGCCAAATCAGCGGAT 59.252 50.000 0.00 0.00 34.43 4.18
6262 8824 0.611618 ACCAATGCCAAATCAGCGGA 60.612 50.000 0.00 0.00 0.00 5.54
6263 8825 0.179129 GACCAATGCCAAATCAGCGG 60.179 55.000 0.00 0.00 0.00 5.52
6264 8826 0.527113 TGACCAATGCCAAATCAGCG 59.473 50.000 0.00 0.00 0.00 5.18
6265 8827 2.028748 ACTTGACCAATGCCAAATCAGC 60.029 45.455 0.00 0.00 0.00 4.26
6266 8828 3.581755 CACTTGACCAATGCCAAATCAG 58.418 45.455 0.00 0.00 0.00 2.90
6267 8829 2.299582 CCACTTGACCAATGCCAAATCA 59.700 45.455 0.00 0.00 0.00 2.57
6268 8830 2.299867 ACCACTTGACCAATGCCAAATC 59.700 45.455 0.00 0.00 0.00 2.17
6269 8831 2.328319 ACCACTTGACCAATGCCAAAT 58.672 42.857 0.00 0.00 0.00 2.32
6270 8832 1.786937 ACCACTTGACCAATGCCAAA 58.213 45.000 0.00 0.00 0.00 3.28
6271 8833 2.235016 GTACCACTTGACCAATGCCAA 58.765 47.619 0.00 0.00 0.00 4.52
6272 8834 1.143889 TGTACCACTTGACCAATGCCA 59.856 47.619 0.00 0.00 0.00 4.92
6273 8835 1.539827 GTGTACCACTTGACCAATGCC 59.460 52.381 0.00 0.00 0.00 4.40
6274 8836 2.226330 TGTGTACCACTTGACCAATGC 58.774 47.619 0.00 0.00 35.11 3.56
6275 8837 3.250762 CACTGTGTACCACTTGACCAATG 59.749 47.826 0.00 0.00 35.11 2.82
6276 8838 3.476552 CACTGTGTACCACTTGACCAAT 58.523 45.455 0.00 0.00 35.11 3.16
6277 8839 2.420827 CCACTGTGTACCACTTGACCAA 60.421 50.000 7.08 0.00 35.11 3.67
6278 8840 1.140052 CCACTGTGTACCACTTGACCA 59.860 52.381 7.08 0.00 35.11 4.02
6279 8841 1.878953 CCACTGTGTACCACTTGACC 58.121 55.000 7.08 0.00 35.11 4.02
6280 8842 1.226746 GCCACTGTGTACCACTTGAC 58.773 55.000 7.08 0.00 35.11 3.18
6281 8843 0.833949 TGCCACTGTGTACCACTTGA 59.166 50.000 7.08 0.00 35.11 3.02
6282 8844 1.896220 ATGCCACTGTGTACCACTTG 58.104 50.000 7.08 0.00 35.11 3.16
6283 8845 2.158682 TCAATGCCACTGTGTACCACTT 60.159 45.455 7.08 0.00 35.11 3.16
6284 8846 1.419762 TCAATGCCACTGTGTACCACT 59.580 47.619 7.08 0.00 35.11 4.00
6285 8847 1.535462 GTCAATGCCACTGTGTACCAC 59.465 52.381 7.08 0.00 34.56 4.16
6286 8848 1.419762 AGTCAATGCCACTGTGTACCA 59.580 47.619 7.08 1.56 0.00 3.25
6287 8849 1.806542 CAGTCAATGCCACTGTGTACC 59.193 52.381 7.08 0.00 37.15 3.34
6288 8850 1.806542 CCAGTCAATGCCACTGTGTAC 59.193 52.381 7.08 0.00 39.84 2.90
6289 8851 1.696884 TCCAGTCAATGCCACTGTGTA 59.303 47.619 7.08 0.00 39.84 2.90
6290 8852 0.473755 TCCAGTCAATGCCACTGTGT 59.526 50.000 7.08 0.00 39.84 3.72
6291 8853 0.877071 GTCCAGTCAATGCCACTGTG 59.123 55.000 0.00 0.00 39.84 3.66
6292 8854 0.473755 TGTCCAGTCAATGCCACTGT 59.526 50.000 2.16 0.00 39.84 3.55
6293 8855 0.877071 GTGTCCAGTCAATGCCACTG 59.123 55.000 0.00 0.00 40.96 3.66
6294 8856 0.603707 CGTGTCCAGTCAATGCCACT 60.604 55.000 0.00 0.00 30.90 4.00
6295 8857 0.884704 ACGTGTCCAGTCAATGCCAC 60.885 55.000 0.00 0.00 0.00 5.01
6296 8858 0.602638 GACGTGTCCAGTCAATGCCA 60.603 55.000 0.00 0.00 38.42 4.92
6297 8859 0.602638 TGACGTGTCCAGTCAATGCC 60.603 55.000 0.00 0.00 44.56 4.40
6298 8860 2.912986 TGACGTGTCCAGTCAATGC 58.087 52.632 0.00 0.00 44.56 3.56
6303 8865 1.719780 GTTTCGATGACGTGTCCAGTC 59.280 52.381 0.00 0.00 40.69 3.51
6304 8866 1.067974 TGTTTCGATGACGTGTCCAGT 59.932 47.619 0.00 0.00 40.69 4.00
6305 8867 1.721389 CTGTTTCGATGACGTGTCCAG 59.279 52.381 0.00 0.00 40.69 3.86
6306 8868 1.778334 CTGTTTCGATGACGTGTCCA 58.222 50.000 0.00 0.00 40.69 4.02
6307 8869 0.438830 GCTGTTTCGATGACGTGTCC 59.561 55.000 0.00 0.00 40.69 4.02
6308 8870 0.091344 CGCTGTTTCGATGACGTGTC 59.909 55.000 0.00 0.00 40.69 3.67
6309 8871 0.596600 ACGCTGTTTCGATGACGTGT 60.597 50.000 0.00 0.00 40.69 4.49
6310 8872 1.333115 TACGCTGTTTCGATGACGTG 58.667 50.000 0.00 6.55 40.69 4.49
6311 8873 2.273370 ATACGCTGTTTCGATGACGT 57.727 45.000 0.00 0.00 40.69 4.34
6312 8874 3.634730 AAATACGCTGTTTCGATGACG 57.365 42.857 0.00 0.00 41.26 4.35
6313 8875 4.547587 CGGTAAATACGCTGTTTCGATGAC 60.548 45.833 0.00 0.00 0.00 3.06
6314 8876 3.548668 CGGTAAATACGCTGTTTCGATGA 59.451 43.478 0.00 0.00 0.00 2.92
6315 8877 3.302221 CCGGTAAATACGCTGTTTCGATG 60.302 47.826 0.00 0.00 0.00 3.84
6316 8878 2.861935 CCGGTAAATACGCTGTTTCGAT 59.138 45.455 0.00 0.00 0.00 3.59
6317 8879 2.094803 TCCGGTAAATACGCTGTTTCGA 60.095 45.455 0.00 0.00 0.00 3.71
6318 8880 2.261345 TCCGGTAAATACGCTGTTTCG 58.739 47.619 0.00 0.00 0.00 3.46
6319 8881 2.606272 CCTCCGGTAAATACGCTGTTTC 59.394 50.000 0.00 0.00 0.00 2.78
6320 8882 2.624636 CCTCCGGTAAATACGCTGTTT 58.375 47.619 0.00 0.00 0.00 2.83
6321 8883 1.134610 CCCTCCGGTAAATACGCTGTT 60.135 52.381 0.00 0.00 0.00 3.16
6322 8884 0.462789 CCCTCCGGTAAATACGCTGT 59.537 55.000 0.00 0.00 0.00 4.40
6323 8885 0.249741 CCCCTCCGGTAAATACGCTG 60.250 60.000 0.00 0.00 0.00 5.18
6324 8886 0.688749 ACCCCTCCGGTAAATACGCT 60.689 55.000 0.00 0.00 45.97 5.07
6325 8887 1.825341 ACCCCTCCGGTAAATACGC 59.175 57.895 0.00 0.00 45.97 4.42
6334 8896 0.825840 TTTGCAGAAAACCCCTCCGG 60.826 55.000 0.00 0.00 37.81 5.14
6335 8897 1.256812 ATTTGCAGAAAACCCCTCCG 58.743 50.000 0.00 0.00 0.00 4.63
6336 8898 3.402110 CAAATTTGCAGAAAACCCCTCC 58.598 45.455 5.01 0.00 0.00 4.30
6369 8931 1.677820 CCACCTCCTACGGCGATTTTT 60.678 52.381 16.62 0.00 0.00 1.94
6370 8932 0.107848 CCACCTCCTACGGCGATTTT 60.108 55.000 16.62 0.00 0.00 1.82
6371 8933 0.974010 TCCACCTCCTACGGCGATTT 60.974 55.000 16.62 0.00 0.00 2.17
6372 8934 1.380785 TCCACCTCCTACGGCGATT 60.381 57.895 16.62 0.00 0.00 3.34
6373 8935 2.125961 GTCCACCTCCTACGGCGAT 61.126 63.158 16.62 0.00 0.00 4.58
6374 8936 2.753043 GTCCACCTCCTACGGCGA 60.753 66.667 16.62 0.00 0.00 5.54
6375 8937 3.834799 GGTCCACCTCCTACGGCG 61.835 72.222 4.80 4.80 0.00 6.46
6376 8938 2.363925 AGGTCCACCTCCTACGGC 60.364 66.667 0.00 0.00 44.77 5.68
6377 8939 2.058595 CCAGGTCCACCTCCTACGG 61.059 68.421 0.00 0.00 46.65 4.02
6378 8940 2.722201 GCCAGGTCCACCTCCTACG 61.722 68.421 0.00 0.00 46.65 3.51
6379 8941 2.368011 GGCCAGGTCCACCTCCTAC 61.368 68.421 0.00 0.00 46.65 3.18
6380 8942 2.040606 GGCCAGGTCCACCTCCTA 59.959 66.667 0.00 0.00 46.65 2.94
6388 8950 4.966787 TTGTTGCCGGCCAGGTCC 62.967 66.667 26.77 0.65 43.70 4.46
6389 8951 3.670377 GTTGTTGCCGGCCAGGTC 61.670 66.667 26.77 10.12 43.70 3.85
6391 8953 4.974721 AGGTTGTTGCCGGCCAGG 62.975 66.667 26.77 6.38 44.97 4.45
6392 8954 3.365265 GAGGTTGTTGCCGGCCAG 61.365 66.667 26.77 0.00 0.00 4.85
6393 8955 3.723097 TTGAGGTTGTTGCCGGCCA 62.723 57.895 26.77 11.12 0.00 5.36
6394 8956 2.909965 TTGAGGTTGTTGCCGGCC 60.910 61.111 26.77 10.34 0.00 6.13
6395 8957 2.335011 GTTGAGGTTGTTGCCGGC 59.665 61.111 22.73 22.73 0.00 6.13
6396 8958 2.637025 CGTTGAGGTTGTTGCCGG 59.363 61.111 0.00 0.00 0.00 6.13
6397 8959 2.637025 CCGTTGAGGTTGTTGCCG 59.363 61.111 0.00 0.00 34.51 5.69
6398 8960 2.130073 GAGCCGTTGAGGTTGTTGCC 62.130 60.000 0.00 0.00 43.70 4.52
6399 8961 1.166531 AGAGCCGTTGAGGTTGTTGC 61.167 55.000 0.00 0.00 43.70 4.17
6400 8962 2.163818 TAGAGCCGTTGAGGTTGTTG 57.836 50.000 0.00 0.00 43.70 3.33
6401 8963 2.354805 GGATAGAGCCGTTGAGGTTGTT 60.355 50.000 0.00 0.00 43.70 2.83
6402 8964 1.207329 GGATAGAGCCGTTGAGGTTGT 59.793 52.381 0.00 0.00 43.70 3.32
6403 8965 1.473434 GGGATAGAGCCGTTGAGGTTG 60.473 57.143 0.00 0.00 43.70 3.77
6404 8966 0.831307 GGGATAGAGCCGTTGAGGTT 59.169 55.000 0.00 0.00 43.70 3.50
6405 8967 1.049289 GGGGATAGAGCCGTTGAGGT 61.049 60.000 0.00 0.00 43.70 3.85
6406 8968 1.749033 GGGGATAGAGCCGTTGAGG 59.251 63.158 0.00 0.00 44.97 3.86
6407 8969 1.364171 CGGGGATAGAGCCGTTGAG 59.636 63.158 0.00 0.00 0.00 3.02
6408 8970 2.792947 GCGGGGATAGAGCCGTTGA 61.793 63.158 0.00 0.00 0.00 3.18
6409 8971 2.280186 GCGGGGATAGAGCCGTTG 60.280 66.667 0.00 0.00 0.00 4.10
6410 8972 3.547513 GGCGGGGATAGAGCCGTT 61.548 66.667 0.00 0.00 41.53 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.