Multiple sequence alignment - TraesCS2B01G183600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G183600 chr2B 100.000 3497 0 0 1 3497 158630729 158634225 0.000000e+00 6458.0
1 TraesCS2B01G183600 chr2D 93.076 2513 142 18 1 2501 108933312 108935804 0.000000e+00 3648.0
2 TraesCS2B01G183600 chr2D 82.788 825 134 6 1 818 359234995 359235818 0.000000e+00 730.0
3 TraesCS2B01G183600 chr2A 94.695 1508 79 1 989 2496 104919857 104921363 0.000000e+00 2340.0
4 TraesCS2B01G183600 chr2A 82.000 1000 134 30 1 964 104916784 104917773 0.000000e+00 808.0
5 TraesCS2B01G183600 chr2A 89.163 203 11 6 3298 3495 104921565 104921761 3.490000e-60 243.0
6 TraesCS2B01G183600 chr7D 80.258 1474 219 53 1039 2494 630626453 630625034 0.000000e+00 1044.0
7 TraesCS2B01G183600 chr7D 82.810 605 87 12 1897 2493 630980950 630980355 3.090000e-145 525.0
8 TraesCS2B01G183600 chr7D 79.968 629 105 15 1065 1687 630981706 630981093 8.910000e-121 444.0
9 TraesCS2B01G183600 chr7D 74.262 610 118 34 1691 2282 174334924 174334336 1.630000e-53 220.0
10 TraesCS2B01G183600 chr7D 83.333 126 21 0 1631 1756 630812178 630812053 2.210000e-22 117.0
11 TraesCS2B01G183600 chr7B 79.550 1066 168 32 1439 2493 733707348 733706322 0.000000e+00 715.0
12 TraesCS2B01G183600 chr7B 81.716 268 40 5 1123 1390 733707597 733707339 7.600000e-52 215.0
13 TraesCS2B01G183600 chr7B 73.390 590 127 27 1691 2265 138864655 138864081 3.560000e-45 193.0
14 TraesCS2B01G183600 chr7B 100.000 28 0 0 818 845 474460608 474460581 6.000000e-03 52.8
15 TraesCS2B01G183600 chr3D 81.807 786 130 9 1 777 431224267 431223486 0.000000e+00 647.0
16 TraesCS2B01G183600 chr3D 81.876 789 122 12 1 777 423018750 423017971 0.000000e+00 645.0
17 TraesCS2B01G183600 chr3D 80.563 782 134 14 5 779 105710704 105711474 1.400000e-163 586.0
18 TraesCS2B01G183600 chr5B 80.240 835 143 15 1 822 438792303 438791478 2.980000e-170 608.0
19 TraesCS2B01G183600 chr5D 80.324 803 143 12 32 823 340762632 340763430 8.360000e-166 593.0
20 TraesCS2B01G183600 chr1A 79.672 792 142 14 1 779 437236165 437236950 1.420000e-153 553.0
21 TraesCS2B01G183600 chrUn 83.223 602 83 14 1901 2493 88639302 88638710 1.430000e-148 536.0
22 TraesCS2B01G183600 chr6A 87.707 423 42 7 2504 2920 67000551 67000133 5.250000e-133 484.0
23 TraesCS2B01G183600 chr6A 79.845 129 18 4 3375 3495 468338311 468338439 1.730000e-13 87.9
24 TraesCS2B01G183600 chr7A 74.068 590 123 25 1691 2265 176285506 176284932 7.600000e-52 215.0
25 TraesCS2B01G183600 chr6B 90.566 53 3 2 3404 3454 493323540 493323592 6.260000e-08 69.4
26 TraesCS2B01G183600 chr6D 100.000 28 0 0 818 845 386911524 386911551 6.000000e-03 52.8
27 TraesCS2B01G183600 chr4D 100.000 28 0 0 818 845 93713660 93713633 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G183600 chr2B 158630729 158634225 3496 False 6458.000000 6458 100.000000 1 3497 1 chr2B.!!$F1 3496
1 TraesCS2B01G183600 chr2D 108933312 108935804 2492 False 3648.000000 3648 93.076000 1 2501 1 chr2D.!!$F1 2500
2 TraesCS2B01G183600 chr2D 359234995 359235818 823 False 730.000000 730 82.788000 1 818 1 chr2D.!!$F2 817
3 TraesCS2B01G183600 chr2A 104916784 104921761 4977 False 1130.333333 2340 88.619333 1 3495 3 chr2A.!!$F1 3494
4 TraesCS2B01G183600 chr7D 630625034 630626453 1419 True 1044.000000 1044 80.258000 1039 2494 1 chr7D.!!$R2 1455
5 TraesCS2B01G183600 chr7D 630980355 630981706 1351 True 484.500000 525 81.389000 1065 2493 2 chr7D.!!$R4 1428
6 TraesCS2B01G183600 chr7D 174334336 174334924 588 True 220.000000 220 74.262000 1691 2282 1 chr7D.!!$R1 591
7 TraesCS2B01G183600 chr7B 733706322 733707597 1275 True 465.000000 715 80.633000 1123 2493 2 chr7B.!!$R3 1370
8 TraesCS2B01G183600 chr3D 431223486 431224267 781 True 647.000000 647 81.807000 1 777 1 chr3D.!!$R2 776
9 TraesCS2B01G183600 chr3D 423017971 423018750 779 True 645.000000 645 81.876000 1 777 1 chr3D.!!$R1 776
10 TraesCS2B01G183600 chr3D 105710704 105711474 770 False 586.000000 586 80.563000 5 779 1 chr3D.!!$F1 774
11 TraesCS2B01G183600 chr5B 438791478 438792303 825 True 608.000000 608 80.240000 1 822 1 chr5B.!!$R1 821
12 TraesCS2B01G183600 chr5D 340762632 340763430 798 False 593.000000 593 80.324000 32 823 1 chr5D.!!$F1 791
13 TraesCS2B01G183600 chr1A 437236165 437236950 785 False 553.000000 553 79.672000 1 779 1 chr1A.!!$F1 778
14 TraesCS2B01G183600 chrUn 88638710 88639302 592 True 536.000000 536 83.223000 1901 2493 1 chrUn.!!$R1 592
15 TraesCS2B01G183600 chr7A 176284932 176285506 574 True 215.000000 215 74.068000 1691 2265 1 chr7A.!!$R1 574

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
403 434 0.238289 CAGTTGCCGAACATGGTGAC 59.762 55.0 0.0 0.0 34.17 3.67 F
475 506 0.319555 CGGCGACAAAGGAGAAGTGA 60.320 55.0 0.0 0.0 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1944 4184 0.973632 ACCCGAAGCAGATGTACACA 59.026 50.000 0.0 0.0 0.00 3.72 R
2504 4750 2.615618 CAGCTAAGCGCGCGTTAG 59.384 61.111 30.4 30.4 45.59 2.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 67 2.476619 CGATCGAAAACAGTCTTGCACT 59.523 45.455 10.26 0.00 34.67 4.40
67 69 4.552767 CGATCGAAAACAGTCTTGCACTTT 60.553 41.667 10.26 0.00 30.26 2.66
130 140 1.268743 GCAAAATAGTCGGCCATCAGC 60.269 52.381 2.24 0.00 42.60 4.26
165 176 1.315257 GCCCTGTTGCGGTTGATCAT 61.315 55.000 0.00 0.00 0.00 2.45
170 181 1.463056 TGTTGCGGTTGATCATTCGAC 59.537 47.619 18.39 10.89 35.76 4.20
179 190 1.134818 TGATCATTCGACGACCCTTGG 60.135 52.381 0.00 0.00 0.00 3.61
223 234 1.041447 GCTCCTTGGCATGCTCCATT 61.041 55.000 18.92 0.00 35.77 3.16
334 357 6.867662 ATGTACTCCAAATCGAAATCCATC 57.132 37.500 0.00 0.00 0.00 3.51
335 358 5.739959 TGTACTCCAAATCGAAATCCATCA 58.260 37.500 0.00 0.00 0.00 3.07
349 372 7.761704 TCGAAATCCATCACTAGAAAGAAGAAG 59.238 37.037 0.00 0.00 0.00 2.85
358 382 7.217906 TCACTAGAAAGAAGAAGGGAAAACTC 58.782 38.462 0.00 0.00 0.00 3.01
403 434 0.238289 CAGTTGCCGAACATGGTGAC 59.762 55.000 0.00 0.00 34.17 3.67
430 461 3.632333 CAGTAGAGGATGGTACCTGACA 58.368 50.000 14.36 0.00 40.73 3.58
464 495 2.592287 GGGGTTGAACGGCGACAA 60.592 61.111 16.62 16.57 32.10 3.18
475 506 0.319555 CGGCGACAAAGGAGAAGTGA 60.320 55.000 0.00 0.00 0.00 3.41
503 534 1.004560 CTGCTGAAACGCTGGAGGA 60.005 57.895 0.00 0.00 31.65 3.71
628 661 4.162690 GCGCGGGGGACTCAGAAT 62.163 66.667 8.83 0.00 0.00 2.40
689 728 2.341452 GGACTCCCGCAAAGCTTTT 58.659 52.632 9.53 0.00 0.00 2.27
703 742 5.350633 CAAAGCTTTTCATGTTTGTCTCCA 58.649 37.500 9.53 0.00 0.00 3.86
833 890 3.400322 AGATGCCCTAACCATCCAATCAT 59.600 43.478 0.00 0.00 39.87 2.45
845 902 5.065914 CCATCCAATCATAGATTGGTTCGT 58.934 41.667 28.38 15.81 46.47 3.85
862 919 7.894376 TGGTTCGTAGTACAAAATTTAGGAG 57.106 36.000 0.38 0.00 0.00 3.69
868 926 6.656270 CGTAGTACAAAATTTAGGAGGGGTTT 59.344 38.462 0.38 0.00 0.00 3.27
954 1012 5.645067 AGAAAAAGATGACGATCAGCATCAA 59.355 36.000 20.55 0.00 42.52 2.57
985 3110 1.936880 CGCACGCGAGCTCTTCTAG 60.937 63.158 25.38 4.99 42.83 2.43
986 3111 1.137825 GCACGCGAGCTCTTCTAGT 59.862 57.895 21.52 1.53 0.00 2.57
987 3112 0.377554 GCACGCGAGCTCTTCTAGTA 59.622 55.000 21.52 0.00 0.00 1.82
988 3113 1.856807 GCACGCGAGCTCTTCTAGTAC 60.857 57.143 21.52 0.00 0.00 2.73
989 3114 1.666700 CACGCGAGCTCTTCTAGTACT 59.333 52.381 15.93 0.00 0.00 2.73
990 3115 2.864946 CACGCGAGCTCTTCTAGTACTA 59.135 50.000 15.93 1.89 0.00 1.82
1016 3141 9.217278 ACTATTTAGCATGCAGATATCTTCTTG 57.783 33.333 21.98 8.12 29.93 3.02
1048 3173 1.377202 GAATTCTCGCACCTGCCCA 60.377 57.895 0.00 0.00 37.91 5.36
1296 3424 1.968017 AGTCGCCACCGTCGTTCTA 60.968 57.895 0.00 0.00 35.54 2.10
2154 4397 3.838271 GAGATCCTGCGCCACCGA 61.838 66.667 4.18 0.00 36.29 4.69
2265 4508 0.948623 CCGACCAGTTCATCAACGCA 60.949 55.000 0.00 0.00 37.61 5.24
2389 4635 1.755008 GAGGGGGAGTCCGTGAGAG 60.755 68.421 2.26 0.00 36.01 3.20
2502 4748 5.220548 GCTCAGTGACGTCGACTAGTATTTA 60.221 44.000 14.70 0.00 0.00 1.40
2503 4749 6.341880 TCAGTGACGTCGACTAGTATTTAG 57.658 41.667 14.70 0.00 0.00 1.85
2504 4750 4.962751 CAGTGACGTCGACTAGTATTTAGC 59.037 45.833 14.70 0.00 0.00 3.09
2506 4752 6.019237 CAGTGACGTCGACTAGTATTTAGCTA 60.019 42.308 14.70 0.00 0.00 3.32
2507 4753 6.536582 AGTGACGTCGACTAGTATTTAGCTAA 59.463 38.462 14.70 0.86 0.00 3.09
2509 4755 5.732288 ACGTCGACTAGTATTTAGCTAACG 58.268 41.667 14.70 5.19 0.00 3.18
2510 4756 4.606414 CGTCGACTAGTATTTAGCTAACGC 59.394 45.833 14.70 0.00 0.00 4.84
2511 4757 4.606414 GTCGACTAGTATTTAGCTAACGCG 59.394 45.833 8.70 3.53 42.32 6.01
2512 4758 3.357240 CGACTAGTATTTAGCTAACGCGC 59.643 47.826 5.73 0.00 42.32 6.86
2513 4759 3.294943 ACTAGTATTTAGCTAACGCGCG 58.705 45.455 30.96 30.96 42.32 6.86
2514 4760 0.850856 AGTATTTAGCTAACGCGCGC 59.149 50.000 32.58 23.91 42.32 6.86
2517 4763 1.563111 ATTTAGCTAACGCGCGCTTA 58.437 45.000 32.58 23.98 42.32 3.09
2519 4765 1.477030 TTAGCTAACGCGCGCTTAGC 61.477 55.000 39.30 39.30 44.42 3.09
2520 4766 3.255379 GCTAACGCGCGCTTAGCT 61.255 61.111 39.03 21.23 45.59 3.32
2521 4767 2.615618 CTAACGCGCGCTTAGCTG 59.384 61.111 32.58 14.95 45.59 4.24
2522 4768 3.478345 CTAACGCGCGCTTAGCTGC 62.478 63.158 32.58 6.80 45.59 5.25
2529 4775 3.195698 CGCTTAGCTGCCCCGTTC 61.196 66.667 1.76 0.00 0.00 3.95
2530 4776 2.269241 GCTTAGCTGCCCCGTTCT 59.731 61.111 0.00 0.00 0.00 3.01
2532 4778 1.369839 GCTTAGCTGCCCCGTTCTTC 61.370 60.000 0.00 0.00 0.00 2.87
2533 4779 1.079405 TTAGCTGCCCCGTTCTTCG 60.079 57.895 0.00 0.00 39.52 3.79
2536 4782 2.815647 CTGCCCCGTTCTTCGCTC 60.816 66.667 0.00 0.00 38.35 5.03
2537 4783 4.735132 TGCCCCGTTCTTCGCTCG 62.735 66.667 0.00 0.00 38.35 5.03
2539 4785 2.048503 CCCCGTTCTTCGCTCGTT 60.049 61.111 0.00 0.00 38.35 3.85
2541 4787 2.380410 CCCGTTCTTCGCTCGTTGG 61.380 63.158 0.00 0.00 38.35 3.77
2542 4788 1.372499 CCGTTCTTCGCTCGTTGGA 60.372 57.895 0.00 0.00 38.35 3.53
2543 4789 0.736325 CCGTTCTTCGCTCGTTGGAT 60.736 55.000 0.00 0.00 38.35 3.41
2544 4790 1.068474 CGTTCTTCGCTCGTTGGATT 58.932 50.000 0.00 0.00 0.00 3.01
2545 4791 1.201812 CGTTCTTCGCTCGTTGGATTG 60.202 52.381 0.00 0.00 0.00 2.67
2548 4794 1.272490 TCTTCGCTCGTTGGATTGACT 59.728 47.619 0.00 0.00 0.00 3.41
2549 4795 1.656095 CTTCGCTCGTTGGATTGACTC 59.344 52.381 0.00 0.00 0.00 3.36
2550 4796 0.888619 TCGCTCGTTGGATTGACTCT 59.111 50.000 0.00 0.00 0.00 3.24
2551 4797 1.272490 TCGCTCGTTGGATTGACTCTT 59.728 47.619 0.00 0.00 0.00 2.85
2552 4798 2.069273 CGCTCGTTGGATTGACTCTTT 58.931 47.619 0.00 0.00 0.00 2.52
2553 4799 2.480419 CGCTCGTTGGATTGACTCTTTT 59.520 45.455 0.00 0.00 0.00 2.27
2555 4801 4.330074 CGCTCGTTGGATTGACTCTTTTAT 59.670 41.667 0.00 0.00 0.00 1.40
2556 4802 5.518847 CGCTCGTTGGATTGACTCTTTTATA 59.481 40.000 0.00 0.00 0.00 0.98
2557 4803 6.201044 CGCTCGTTGGATTGACTCTTTTATAT 59.799 38.462 0.00 0.00 0.00 0.86
2558 4804 7.348201 GCTCGTTGGATTGACTCTTTTATATG 58.652 38.462 0.00 0.00 0.00 1.78
2559 4805 7.011482 GCTCGTTGGATTGACTCTTTTATATGT 59.989 37.037 0.00 0.00 0.00 2.29
2561 4807 9.309516 TCGTTGGATTGACTCTTTTATATGTAC 57.690 33.333 0.00 0.00 0.00 2.90
2562 4808 9.314321 CGTTGGATTGACTCTTTTATATGTACT 57.686 33.333 0.00 0.00 0.00 2.73
2565 4811 9.982651 TGGATTGACTCTTTTATATGTACTAGC 57.017 33.333 0.00 0.00 0.00 3.42
2566 4812 9.982651 GGATTGACTCTTTTATATGTACTAGCA 57.017 33.333 0.00 0.00 0.00 3.49
2581 4827 8.613060 ATGTACTAGCAGATTATTGTCATTGG 57.387 34.615 0.00 0.00 0.00 3.16
2582 4828 7.564793 TGTACTAGCAGATTATTGTCATTGGT 58.435 34.615 0.00 0.00 0.00 3.67
2583 4829 8.046708 TGTACTAGCAGATTATTGTCATTGGTT 58.953 33.333 0.00 0.00 0.00 3.67
2584 4830 7.325660 ACTAGCAGATTATTGTCATTGGTTG 57.674 36.000 0.00 0.00 0.00 3.77
2585 4831 6.886459 ACTAGCAGATTATTGTCATTGGTTGT 59.114 34.615 0.00 0.00 0.00 3.32
2586 4832 6.594788 AGCAGATTATTGTCATTGGTTGTT 57.405 33.333 0.00 0.00 0.00 2.83
2587 4833 6.996509 AGCAGATTATTGTCATTGGTTGTTT 58.003 32.000 0.00 0.00 0.00 2.83
2588 4834 7.092716 AGCAGATTATTGTCATTGGTTGTTTC 58.907 34.615 0.00 0.00 0.00 2.78
2589 4835 6.867816 GCAGATTATTGTCATTGGTTGTTTCA 59.132 34.615 0.00 0.00 0.00 2.69
2590 4836 7.546667 GCAGATTATTGTCATTGGTTGTTTCAT 59.453 33.333 0.00 0.00 0.00 2.57
2591 4837 9.426837 CAGATTATTGTCATTGGTTGTTTCATT 57.573 29.630 0.00 0.00 0.00 2.57
2595 4841 9.605275 TTATTGTCATTGGTTGTTTCATTTTGA 57.395 25.926 0.00 0.00 0.00 2.69
2596 4842 8.680039 ATTGTCATTGGTTGTTTCATTTTGAT 57.320 26.923 0.00 0.00 0.00 2.57
2597 4843 7.712264 TGTCATTGGTTGTTTCATTTTGATC 57.288 32.000 0.00 0.00 0.00 2.92
2598 4844 7.499292 TGTCATTGGTTGTTTCATTTTGATCT 58.501 30.769 0.00 0.00 0.00 2.75
2599 4845 7.986320 TGTCATTGGTTGTTTCATTTTGATCTT 59.014 29.630 0.00 0.00 0.00 2.40
2600 4846 8.829612 GTCATTGGTTGTTTCATTTTGATCTTT 58.170 29.630 0.00 0.00 0.00 2.52
2601 4847 9.393512 TCATTGGTTGTTTCATTTTGATCTTTT 57.606 25.926 0.00 0.00 0.00 2.27
2602 4848 9.654417 CATTGGTTGTTTCATTTTGATCTTTTC 57.346 29.630 0.00 0.00 0.00 2.29
2603 4849 9.617523 ATTGGTTGTTTCATTTTGATCTTTTCT 57.382 25.926 0.00 0.00 0.00 2.52
2604 4850 8.422973 TGGTTGTTTCATTTTGATCTTTTCTG 57.577 30.769 0.00 0.00 0.00 3.02
2605 4851 8.040132 TGGTTGTTTCATTTTGATCTTTTCTGT 58.960 29.630 0.00 0.00 0.00 3.41
2606 4852 8.330302 GGTTGTTTCATTTTGATCTTTTCTGTG 58.670 33.333 0.00 0.00 0.00 3.66
2607 4853 8.872845 GTTGTTTCATTTTGATCTTTTCTGTGT 58.127 29.630 0.00 0.00 0.00 3.72
2608 4854 9.434420 TTGTTTCATTTTGATCTTTTCTGTGTT 57.566 25.926 0.00 0.00 0.00 3.32
2609 4855 8.871862 TGTTTCATTTTGATCTTTTCTGTGTTG 58.128 29.630 0.00 0.00 0.00 3.33
2610 4856 8.330302 GTTTCATTTTGATCTTTTCTGTGTTGG 58.670 33.333 0.00 0.00 0.00 3.77
2611 4857 5.984926 TCATTTTGATCTTTTCTGTGTTGGC 59.015 36.000 0.00 0.00 0.00 4.52
2612 4858 4.998671 TTTGATCTTTTCTGTGTTGGCA 57.001 36.364 0.00 0.00 0.00 4.92
2613 4859 5.534207 TTTGATCTTTTCTGTGTTGGCAT 57.466 34.783 0.00 0.00 0.00 4.40
2614 4860 6.647334 TTTGATCTTTTCTGTGTTGGCATA 57.353 33.333 0.00 0.00 0.00 3.14
2615 4861 6.839124 TTGATCTTTTCTGTGTTGGCATAT 57.161 33.333 0.00 0.00 0.00 1.78
2616 4862 6.198650 TGATCTTTTCTGTGTTGGCATATG 57.801 37.500 0.00 0.00 0.00 1.78
2617 4863 5.711506 TGATCTTTTCTGTGTTGGCATATGT 59.288 36.000 4.29 0.00 0.00 2.29
2618 4864 6.209192 TGATCTTTTCTGTGTTGGCATATGTT 59.791 34.615 4.29 0.00 0.00 2.71
2619 4865 6.403866 TCTTTTCTGTGTTGGCATATGTTT 57.596 33.333 4.29 0.00 0.00 2.83
2620 4866 6.815089 TCTTTTCTGTGTTGGCATATGTTTT 58.185 32.000 4.29 0.00 0.00 2.43
2621 4867 7.271511 TCTTTTCTGTGTTGGCATATGTTTTT 58.728 30.769 4.29 0.00 0.00 1.94
2640 4886 5.354842 TTTTTATGTTTCGGGGGTGTTTT 57.645 34.783 0.00 0.00 0.00 2.43
2641 4887 5.354842 TTTTATGTTTCGGGGGTGTTTTT 57.645 34.783 0.00 0.00 0.00 1.94
2664 4910 9.857957 TTTTTCTTTAGTAAATCGTGTTTGGTT 57.142 25.926 0.00 0.00 0.00 3.67
2665 4911 9.857957 TTTTCTTTAGTAAATCGTGTTTGGTTT 57.142 25.926 0.00 0.00 0.00 3.27
2666 4912 9.505995 TTTCTTTAGTAAATCGTGTTTGGTTTC 57.494 29.630 0.00 0.00 0.00 2.78
2667 4913 8.441312 TCTTTAGTAAATCGTGTTTGGTTTCT 57.559 30.769 0.00 0.00 0.00 2.52
2668 4914 9.545105 TCTTTAGTAAATCGTGTTTGGTTTCTA 57.455 29.630 0.00 0.00 0.00 2.10
2672 4918 8.385898 AGTAAATCGTGTTTGGTTTCTATTGA 57.614 30.769 0.02 0.00 0.00 2.57
2673 4919 8.842280 AGTAAATCGTGTTTGGTTTCTATTGAA 58.158 29.630 0.02 0.00 0.00 2.69
2674 4920 9.113876 GTAAATCGTGTTTGGTTTCTATTGAAG 57.886 33.333 0.00 0.00 33.28 3.02
2675 4921 7.504924 AATCGTGTTTGGTTTCTATTGAAGA 57.495 32.000 0.00 0.00 33.28 2.87
2676 4922 6.928979 TCGTGTTTGGTTTCTATTGAAGAA 57.071 33.333 0.00 0.00 42.62 2.52
2704 4950 6.773976 TTTGTTCCAACAGAAGAATGAAGT 57.226 33.333 0.00 0.00 37.56 3.01
2705 4951 6.773976 TTGTTCCAACAGAAGAATGAAGTT 57.226 33.333 0.00 0.00 40.50 2.66
2706 4952 7.873719 TTGTTCCAACAGAAGAATGAAGTTA 57.126 32.000 0.00 0.00 40.50 2.24
2707 4953 8.463930 TTGTTCCAACAGAAGAATGAAGTTAT 57.536 30.769 0.00 0.00 40.50 1.89
2708 4954 8.463930 TGTTCCAACAGAAGAATGAAGTTATT 57.536 30.769 0.00 0.00 34.29 1.40
2709 4955 8.912988 TGTTCCAACAGAAGAATGAAGTTATTT 58.087 29.630 0.00 0.00 34.29 1.40
2710 4956 9.185192 GTTCCAACAGAAGAATGAAGTTATTTG 57.815 33.333 0.00 0.00 34.29 2.32
2711 4957 8.463930 TCCAACAGAAGAATGAAGTTATTTGT 57.536 30.769 0.00 0.00 0.00 2.83
2712 4958 8.912988 TCCAACAGAAGAATGAAGTTATTTGTT 58.087 29.630 0.00 0.00 30.13 2.83
2713 4959 8.971321 CCAACAGAAGAATGAAGTTATTTGTTG 58.029 33.333 0.00 0.00 38.29 3.33
2714 4960 8.482429 CAACAGAAGAATGAAGTTATTTGTTGC 58.518 33.333 0.00 0.00 35.67 4.17
2715 4961 6.857964 ACAGAAGAATGAAGTTATTTGTTGCG 59.142 34.615 0.00 0.00 0.00 4.85
2716 4962 6.857964 CAGAAGAATGAAGTTATTTGTTGCGT 59.142 34.615 0.00 0.00 0.00 5.24
2717 4963 6.857964 AGAAGAATGAAGTTATTTGTTGCGTG 59.142 34.615 0.00 0.00 0.00 5.34
2718 4964 6.312399 AGAATGAAGTTATTTGTTGCGTGA 57.688 33.333 0.00 0.00 0.00 4.35
2719 4965 6.913170 AGAATGAAGTTATTTGTTGCGTGAT 58.087 32.000 0.00 0.00 0.00 3.06
2720 4966 7.370383 AGAATGAAGTTATTTGTTGCGTGATT 58.630 30.769 0.00 0.00 0.00 2.57
2721 4967 6.932901 ATGAAGTTATTTGTTGCGTGATTG 57.067 33.333 0.00 0.00 0.00 2.67
2722 4968 5.218885 TGAAGTTATTTGTTGCGTGATTGG 58.781 37.500 0.00 0.00 0.00 3.16
2723 4969 4.173036 AGTTATTTGTTGCGTGATTGGG 57.827 40.909 0.00 0.00 0.00 4.12
2724 4970 3.056891 AGTTATTTGTTGCGTGATTGGGG 60.057 43.478 0.00 0.00 0.00 4.96
2725 4971 0.037419 ATTTGTTGCGTGATTGGGGC 60.037 50.000 0.00 0.00 0.00 5.80
2726 4972 2.413437 TTTGTTGCGTGATTGGGGCG 62.413 55.000 0.00 0.00 0.00 6.13
2727 4973 3.361977 GTTGCGTGATTGGGGCGT 61.362 61.111 0.00 0.00 0.00 5.68
2728 4974 3.361158 TTGCGTGATTGGGGCGTG 61.361 61.111 0.00 0.00 0.00 5.34
2729 4975 4.634703 TGCGTGATTGGGGCGTGT 62.635 61.111 0.00 0.00 0.00 4.49
2730 4976 3.361977 GCGTGATTGGGGCGTGTT 61.362 61.111 0.00 0.00 0.00 3.32
2731 4977 2.914908 GCGTGATTGGGGCGTGTTT 61.915 57.895 0.00 0.00 0.00 2.83
2732 4978 1.579084 GCGTGATTGGGGCGTGTTTA 61.579 55.000 0.00 0.00 0.00 2.01
2733 4979 0.167251 CGTGATTGGGGCGTGTTTAC 59.833 55.000 0.00 0.00 0.00 2.01
2734 4980 1.240256 GTGATTGGGGCGTGTTTACA 58.760 50.000 0.00 0.00 0.00 2.41
2735 4981 1.816224 GTGATTGGGGCGTGTTTACAT 59.184 47.619 0.00 0.00 0.00 2.29
2736 4982 1.815613 TGATTGGGGCGTGTTTACATG 59.184 47.619 0.00 0.00 36.01 3.21
2737 4983 1.816224 GATTGGGGCGTGTTTACATGT 59.184 47.619 2.69 2.69 35.38 3.21
2738 4984 1.693627 TTGGGGCGTGTTTACATGTT 58.306 45.000 2.30 0.00 35.38 2.71
2739 4985 1.693627 TGGGGCGTGTTTACATGTTT 58.306 45.000 2.30 0.00 35.38 2.83
2740 4986 1.609555 TGGGGCGTGTTTACATGTTTC 59.390 47.619 2.30 0.00 35.38 2.78
2741 4987 1.400500 GGGGCGTGTTTACATGTTTCG 60.400 52.381 2.30 3.72 35.38 3.46
2742 4988 1.400500 GGGCGTGTTTACATGTTTCGG 60.400 52.381 2.30 0.00 35.38 4.30
2743 4989 1.323791 GCGTGTTTACATGTTTCGGC 58.676 50.000 2.30 0.00 35.38 5.54
2744 4990 1.958417 CGTGTTTACATGTTTCGGCC 58.042 50.000 2.30 0.00 0.00 6.13
2745 4991 1.533731 CGTGTTTACATGTTTCGGCCT 59.466 47.619 2.30 0.00 0.00 5.19
2746 4992 2.031508 CGTGTTTACATGTTTCGGCCTT 60.032 45.455 2.30 0.00 0.00 4.35
2747 4993 3.305110 GTGTTTACATGTTTCGGCCTTG 58.695 45.455 2.30 0.00 0.00 3.61
2748 4994 2.294791 TGTTTACATGTTTCGGCCTTGG 59.705 45.455 2.30 0.00 0.00 3.61
2749 4995 2.279935 TTACATGTTTCGGCCTTGGT 57.720 45.000 2.30 0.00 0.00 3.67
2750 4996 1.529226 TACATGTTTCGGCCTTGGTG 58.471 50.000 2.30 0.00 0.00 4.17
2751 4997 0.467290 ACATGTTTCGGCCTTGGTGT 60.467 50.000 0.00 0.00 0.00 4.16
2752 4998 0.673437 CATGTTTCGGCCTTGGTGTT 59.327 50.000 0.00 0.00 0.00 3.32
2753 4999 0.673437 ATGTTTCGGCCTTGGTGTTG 59.327 50.000 0.00 0.00 0.00 3.33
2754 5000 1.362355 GTTTCGGCCTTGGTGTTGG 59.638 57.895 0.00 0.00 0.00 3.77
2755 5001 1.076632 TTTCGGCCTTGGTGTTGGT 60.077 52.632 0.00 0.00 0.00 3.67
2756 5002 1.104577 TTTCGGCCTTGGTGTTGGTC 61.105 55.000 0.00 0.00 0.00 4.02
2757 5003 2.969300 TTCGGCCTTGGTGTTGGTCC 62.969 60.000 0.00 0.00 0.00 4.46
2758 5004 2.197324 GGCCTTGGTGTTGGTCCA 59.803 61.111 0.00 0.00 0.00 4.02
2759 5005 1.228862 GGCCTTGGTGTTGGTCCAT 60.229 57.895 0.00 0.00 34.75 3.41
2760 5006 1.535204 GGCCTTGGTGTTGGTCCATG 61.535 60.000 0.00 0.00 34.75 3.66
2761 5007 0.539438 GCCTTGGTGTTGGTCCATGA 60.539 55.000 0.00 0.00 34.75 3.07
2762 5008 1.892329 GCCTTGGTGTTGGTCCATGAT 60.892 52.381 0.00 0.00 34.75 2.45
2763 5009 1.820519 CCTTGGTGTTGGTCCATGATG 59.179 52.381 0.00 0.00 34.75 3.07
2764 5010 2.555006 CCTTGGTGTTGGTCCATGATGA 60.555 50.000 0.00 0.00 34.75 2.92
2765 5011 3.359033 CTTGGTGTTGGTCCATGATGAT 58.641 45.455 0.00 0.00 34.75 2.45
2766 5012 3.454719 TGGTGTTGGTCCATGATGATT 57.545 42.857 0.00 0.00 0.00 2.57
2767 5013 3.090790 TGGTGTTGGTCCATGATGATTG 58.909 45.455 0.00 0.00 0.00 2.67
2768 5014 3.091545 GGTGTTGGTCCATGATGATTGT 58.908 45.455 0.00 0.00 0.00 2.71
2769 5015 3.511146 GGTGTTGGTCCATGATGATTGTT 59.489 43.478 0.00 0.00 0.00 2.83
2770 5016 4.021192 GGTGTTGGTCCATGATGATTGTTT 60.021 41.667 0.00 0.00 0.00 2.83
2771 5017 4.925054 GTGTTGGTCCATGATGATTGTTTG 59.075 41.667 0.00 0.00 0.00 2.93
2772 5018 4.831710 TGTTGGTCCATGATGATTGTTTGA 59.168 37.500 0.00 0.00 0.00 2.69
2773 5019 5.047872 TGTTGGTCCATGATGATTGTTTGAG 60.048 40.000 0.00 0.00 0.00 3.02
2774 5020 3.444742 TGGTCCATGATGATTGTTTGAGC 59.555 43.478 0.00 0.00 0.00 4.26
2775 5021 3.181483 GGTCCATGATGATTGTTTGAGCC 60.181 47.826 0.00 0.00 0.00 4.70
2776 5022 3.698040 GTCCATGATGATTGTTTGAGCCT 59.302 43.478 0.00 0.00 0.00 4.58
2777 5023 4.883585 GTCCATGATGATTGTTTGAGCCTA 59.116 41.667 0.00 0.00 0.00 3.93
2778 5024 5.533903 GTCCATGATGATTGTTTGAGCCTAT 59.466 40.000 0.00 0.00 0.00 2.57
2779 5025 6.040166 GTCCATGATGATTGTTTGAGCCTATT 59.960 38.462 0.00 0.00 0.00 1.73
2780 5026 6.040054 TCCATGATGATTGTTTGAGCCTATTG 59.960 38.462 0.00 0.00 0.00 1.90
2781 5027 6.040054 CCATGATGATTGTTTGAGCCTATTGA 59.960 38.462 0.00 0.00 0.00 2.57
2782 5028 7.417003 CCATGATGATTGTTTGAGCCTATTGAA 60.417 37.037 0.00 0.00 0.00 2.69
2783 5029 7.465353 TGATGATTGTTTGAGCCTATTGAAA 57.535 32.000 0.00 0.00 0.00 2.69
2784 5030 7.894708 TGATGATTGTTTGAGCCTATTGAAAA 58.105 30.769 0.00 0.00 0.00 2.29
2785 5031 7.814107 TGATGATTGTTTGAGCCTATTGAAAAC 59.186 33.333 0.00 0.00 0.00 2.43
2786 5032 7.288810 TGATTGTTTGAGCCTATTGAAAACT 57.711 32.000 0.00 0.00 33.07 2.66
2787 5033 7.370383 TGATTGTTTGAGCCTATTGAAAACTC 58.630 34.615 0.00 0.00 33.07 3.01
2788 5034 5.705609 TGTTTGAGCCTATTGAAAACTCC 57.294 39.130 0.00 0.00 33.07 3.85
2789 5035 5.385198 TGTTTGAGCCTATTGAAAACTCCT 58.615 37.500 0.00 0.00 33.07 3.69
2790 5036 6.539173 TGTTTGAGCCTATTGAAAACTCCTA 58.461 36.000 0.00 0.00 33.07 2.94
2791 5037 7.175104 TGTTTGAGCCTATTGAAAACTCCTAT 58.825 34.615 0.00 0.00 33.07 2.57
2792 5038 7.669722 TGTTTGAGCCTATTGAAAACTCCTATT 59.330 33.333 0.00 0.00 33.07 1.73
2793 5039 7.865706 TTGAGCCTATTGAAAACTCCTATTC 57.134 36.000 0.00 0.00 0.00 1.75
2794 5040 6.357367 TGAGCCTATTGAAAACTCCTATTCC 58.643 40.000 0.00 0.00 0.00 3.01
2795 5041 6.069673 TGAGCCTATTGAAAACTCCTATTCCA 60.070 38.462 0.00 0.00 0.00 3.53
2796 5042 6.122964 AGCCTATTGAAAACTCCTATTCCAC 58.877 40.000 0.00 0.00 0.00 4.02
2797 5043 5.885912 GCCTATTGAAAACTCCTATTCCACA 59.114 40.000 0.00 0.00 0.00 4.17
2798 5044 6.183360 GCCTATTGAAAACTCCTATTCCACAC 60.183 42.308 0.00 0.00 0.00 3.82
2799 5045 7.112779 CCTATTGAAAACTCCTATTCCACACT 58.887 38.462 0.00 0.00 0.00 3.55
2800 5046 8.265055 CCTATTGAAAACTCCTATTCCACACTA 58.735 37.037 0.00 0.00 0.00 2.74
2801 5047 9.667107 CTATTGAAAACTCCTATTCCACACTAA 57.333 33.333 0.00 0.00 0.00 2.24
2802 5048 8.934023 ATTGAAAACTCCTATTCCACACTAAA 57.066 30.769 0.00 0.00 0.00 1.85
2803 5049 8.754991 TTGAAAACTCCTATTCCACACTAAAA 57.245 30.769 0.00 0.00 0.00 1.52
2804 5050 8.161699 TGAAAACTCCTATTCCACACTAAAAC 57.838 34.615 0.00 0.00 0.00 2.43
2805 5051 7.776030 TGAAAACTCCTATTCCACACTAAAACA 59.224 33.333 0.00 0.00 0.00 2.83
2806 5052 7.745620 AAACTCCTATTCCACACTAAAACAG 57.254 36.000 0.00 0.00 0.00 3.16
2807 5053 6.435292 ACTCCTATTCCACACTAAAACAGT 57.565 37.500 0.00 0.00 38.32 3.55
2808 5054 6.838382 ACTCCTATTCCACACTAAAACAGTT 58.162 36.000 0.00 0.00 34.26 3.16
2809 5055 6.710744 ACTCCTATTCCACACTAAAACAGTTG 59.289 38.462 0.00 0.00 34.26 3.16
2810 5056 6.833041 TCCTATTCCACACTAAAACAGTTGA 58.167 36.000 0.00 0.00 34.26 3.18
2811 5057 7.284074 TCCTATTCCACACTAAAACAGTTGAA 58.716 34.615 0.00 0.00 34.26 2.69
2812 5058 7.942341 TCCTATTCCACACTAAAACAGTTGAAT 59.058 33.333 0.00 0.00 34.26 2.57
2813 5059 8.576442 CCTATTCCACACTAAAACAGTTGAATT 58.424 33.333 0.00 0.00 34.26 2.17
2814 5060 9.398170 CTATTCCACACTAAAACAGTTGAATTG 57.602 33.333 0.00 0.00 34.26 2.32
2815 5061 6.767524 TCCACACTAAAACAGTTGAATTGT 57.232 33.333 0.00 0.00 34.26 2.71
2816 5062 7.164230 TCCACACTAAAACAGTTGAATTGTT 57.836 32.000 0.00 0.00 40.30 2.83
2817 5063 7.032580 TCCACACTAAAACAGTTGAATTGTTG 58.967 34.615 6.83 0.00 38.67 3.33
2818 5064 7.032580 CCACACTAAAACAGTTGAATTGTTGA 58.967 34.615 6.83 0.00 38.67 3.18
2819 5065 7.706179 CCACACTAAAACAGTTGAATTGTTGAT 59.294 33.333 6.83 2.71 38.67 2.57
2820 5066 8.533965 CACACTAAAACAGTTGAATTGTTGATG 58.466 33.333 6.83 6.09 38.67 3.07
2821 5067 8.250332 ACACTAAAACAGTTGAATTGTTGATGT 58.750 29.630 6.83 6.63 38.67 3.06
2822 5068 9.729023 CACTAAAACAGTTGAATTGTTGATGTA 57.271 29.630 6.83 0.00 38.67 2.29
2836 5082 5.870706 TGTTGATGTAACACTAACATGGGA 58.129 37.500 0.00 0.00 44.07 4.37
2837 5083 5.703592 TGTTGATGTAACACTAACATGGGAC 59.296 40.000 0.00 0.00 44.07 4.46
2838 5084 5.755409 TGATGTAACACTAACATGGGACT 57.245 39.130 0.00 0.00 37.69 3.85
2839 5085 5.487433 TGATGTAACACTAACATGGGACTG 58.513 41.667 0.00 0.00 37.69 3.51
2840 5086 3.670625 TGTAACACTAACATGGGACTGC 58.329 45.455 0.00 0.00 0.00 4.40
2841 5087 2.200373 AACACTAACATGGGACTGCC 57.800 50.000 0.00 0.00 0.00 4.85
2851 5097 3.673599 GGACTGCCCACAAAGCTC 58.326 61.111 0.00 0.00 34.14 4.09
2852 5098 1.073897 GGACTGCCCACAAAGCTCT 59.926 57.895 0.00 0.00 34.14 4.09
2853 5099 0.957888 GGACTGCCCACAAAGCTCTC 60.958 60.000 0.00 0.00 34.14 3.20
2854 5100 0.957888 GACTGCCCACAAAGCTCTCC 60.958 60.000 0.00 0.00 0.00 3.71
2855 5101 1.377994 CTGCCCACAAAGCTCTCCT 59.622 57.895 0.00 0.00 0.00 3.69
2856 5102 0.251077 CTGCCCACAAAGCTCTCCTT 60.251 55.000 0.00 0.00 34.51 3.36
2857 5103 0.250901 TGCCCACAAAGCTCTCCTTC 60.251 55.000 0.00 0.00 31.99 3.46
2858 5104 1.301677 GCCCACAAAGCTCTCCTTCG 61.302 60.000 0.00 0.00 31.99 3.79
2859 5105 0.035458 CCCACAAAGCTCTCCTTCGT 59.965 55.000 0.00 0.00 31.99 3.85
2860 5106 1.543429 CCCACAAAGCTCTCCTTCGTT 60.543 52.381 0.00 0.00 31.99 3.85
2861 5107 1.801178 CCACAAAGCTCTCCTTCGTTC 59.199 52.381 0.00 0.00 31.99 3.95
2862 5108 2.548920 CCACAAAGCTCTCCTTCGTTCT 60.549 50.000 0.00 0.00 31.99 3.01
2863 5109 3.134458 CACAAAGCTCTCCTTCGTTCTT 58.866 45.455 0.00 0.00 31.99 2.52
2864 5110 3.059325 CACAAAGCTCTCCTTCGTTCTTG 60.059 47.826 0.00 0.00 31.99 3.02
2865 5111 2.464157 AAGCTCTCCTTCGTTCTTGG 57.536 50.000 0.00 0.00 0.00 3.61
2866 5112 0.036858 AGCTCTCCTTCGTTCTTGGC 60.037 55.000 0.00 0.00 0.00 4.52
2867 5113 0.036858 GCTCTCCTTCGTTCTTGGCT 60.037 55.000 0.00 0.00 0.00 4.75
2868 5114 1.609320 GCTCTCCTTCGTTCTTGGCTT 60.609 52.381 0.00 0.00 0.00 4.35
2869 5115 2.342179 CTCTCCTTCGTTCTTGGCTTC 58.658 52.381 0.00 0.00 0.00 3.86
2870 5116 1.002087 TCTCCTTCGTTCTTGGCTTCC 59.998 52.381 0.00 0.00 0.00 3.46
2871 5117 1.002544 CTCCTTCGTTCTTGGCTTCCT 59.997 52.381 0.00 0.00 0.00 3.36
2872 5118 1.420138 TCCTTCGTTCTTGGCTTCCTT 59.580 47.619 0.00 0.00 0.00 3.36
2873 5119 1.807142 CCTTCGTTCTTGGCTTCCTTC 59.193 52.381 0.00 0.00 0.00 3.46
2874 5120 2.551071 CCTTCGTTCTTGGCTTCCTTCT 60.551 50.000 0.00 0.00 0.00 2.85
2875 5121 2.457366 TCGTTCTTGGCTTCCTTCTC 57.543 50.000 0.00 0.00 0.00 2.87
2876 5122 1.002087 TCGTTCTTGGCTTCCTTCTCC 59.998 52.381 0.00 0.00 0.00 3.71
2877 5123 1.002544 CGTTCTTGGCTTCCTTCTCCT 59.997 52.381 0.00 0.00 0.00 3.69
2878 5124 2.705730 GTTCTTGGCTTCCTTCTCCTC 58.294 52.381 0.00 0.00 0.00 3.71
2879 5125 2.304470 GTTCTTGGCTTCCTTCTCCTCT 59.696 50.000 0.00 0.00 0.00 3.69
2880 5126 1.905215 TCTTGGCTTCCTTCTCCTCTG 59.095 52.381 0.00 0.00 0.00 3.35
2881 5127 0.326264 TTGGCTTCCTTCTCCTCTGC 59.674 55.000 0.00 0.00 0.00 4.26
2882 5128 0.837691 TGGCTTCCTTCTCCTCTGCA 60.838 55.000 0.00 0.00 0.00 4.41
2883 5129 0.326264 GGCTTCCTTCTCCTCTGCAA 59.674 55.000 0.00 0.00 0.00 4.08
2884 5130 1.678425 GGCTTCCTTCTCCTCTGCAAG 60.678 57.143 0.00 0.00 0.00 4.01
2885 5131 1.003003 GCTTCCTTCTCCTCTGCAAGT 59.997 52.381 0.00 0.00 33.76 3.16
2886 5132 2.551938 GCTTCCTTCTCCTCTGCAAGTT 60.552 50.000 0.00 0.00 33.76 2.66
2887 5133 3.749226 CTTCCTTCTCCTCTGCAAGTTT 58.251 45.455 0.00 0.00 33.76 2.66
2888 5134 3.864789 TCCTTCTCCTCTGCAAGTTTT 57.135 42.857 0.00 0.00 33.76 2.43
2889 5135 3.744660 TCCTTCTCCTCTGCAAGTTTTC 58.255 45.455 0.00 0.00 33.76 2.29
2890 5136 3.392616 TCCTTCTCCTCTGCAAGTTTTCT 59.607 43.478 0.00 0.00 33.76 2.52
2891 5137 4.140536 CCTTCTCCTCTGCAAGTTTTCTT 58.859 43.478 0.00 0.00 41.31 2.52
2892 5138 4.215185 CCTTCTCCTCTGCAAGTTTTCTTC 59.785 45.833 0.00 0.00 38.17 2.87
2893 5139 4.422073 TCTCCTCTGCAAGTTTTCTTCA 57.578 40.909 0.00 0.00 38.17 3.02
2894 5140 4.130118 TCTCCTCTGCAAGTTTTCTTCAC 58.870 43.478 0.00 0.00 38.17 3.18
2895 5141 4.133078 CTCCTCTGCAAGTTTTCTTCACT 58.867 43.478 0.00 0.00 38.17 3.41
2896 5142 4.130118 TCCTCTGCAAGTTTTCTTCACTC 58.870 43.478 0.00 0.00 38.17 3.51
2897 5143 3.059325 CCTCTGCAAGTTTTCTTCACTCG 60.059 47.826 0.00 0.00 38.17 4.18
2898 5144 2.287915 TCTGCAAGTTTTCTTCACTCGC 59.712 45.455 0.00 0.00 38.17 5.03
2899 5145 2.288666 TGCAAGTTTTCTTCACTCGCT 58.711 42.857 0.00 0.00 38.17 4.93
2900 5146 2.287915 TGCAAGTTTTCTTCACTCGCTC 59.712 45.455 0.00 0.00 38.17 5.03
2901 5147 2.287915 GCAAGTTTTCTTCACTCGCTCA 59.712 45.455 0.00 0.00 38.17 4.26
2902 5148 3.242739 GCAAGTTTTCTTCACTCGCTCAA 60.243 43.478 0.00 0.00 38.17 3.02
2903 5149 4.274865 CAAGTTTTCTTCACTCGCTCAAC 58.725 43.478 0.00 0.00 38.17 3.18
2904 5150 3.798202 AGTTTTCTTCACTCGCTCAACT 58.202 40.909 0.00 0.00 0.00 3.16
2905 5151 3.557595 AGTTTTCTTCACTCGCTCAACTG 59.442 43.478 0.00 0.00 0.00 3.16
2906 5152 1.502231 TTCTTCACTCGCTCAACTGC 58.498 50.000 0.00 0.00 0.00 4.40
2907 5153 0.676184 TCTTCACTCGCTCAACTGCT 59.324 50.000 0.00 0.00 0.00 4.24
2908 5154 1.886542 TCTTCACTCGCTCAACTGCTA 59.113 47.619 0.00 0.00 0.00 3.49
2909 5155 2.296190 TCTTCACTCGCTCAACTGCTAA 59.704 45.455 0.00 0.00 0.00 3.09
2910 5156 2.065993 TCACTCGCTCAACTGCTAAC 57.934 50.000 0.00 0.00 0.00 2.34
2911 5157 1.613925 TCACTCGCTCAACTGCTAACT 59.386 47.619 0.00 0.00 0.00 2.24
2912 5158 2.035961 TCACTCGCTCAACTGCTAACTT 59.964 45.455 0.00 0.00 0.00 2.66
2913 5159 2.156504 CACTCGCTCAACTGCTAACTTG 59.843 50.000 0.00 0.00 0.00 3.16
2914 5160 1.728971 CTCGCTCAACTGCTAACTTGG 59.271 52.381 0.00 0.00 0.00 3.61
2915 5161 1.343142 TCGCTCAACTGCTAACTTGGA 59.657 47.619 0.00 0.00 0.00 3.53
2916 5162 2.143122 CGCTCAACTGCTAACTTGGAA 58.857 47.619 0.00 0.00 0.00 3.53
2917 5163 2.548057 CGCTCAACTGCTAACTTGGAAA 59.452 45.455 0.00 0.00 0.00 3.13
2918 5164 3.003275 CGCTCAACTGCTAACTTGGAAAA 59.997 43.478 0.00 0.00 0.00 2.29
2919 5165 4.497340 CGCTCAACTGCTAACTTGGAAAAA 60.497 41.667 0.00 0.00 0.00 1.94
2990 5236 7.693020 TGCTCAAGGAGTTTTAAAATTTTTGC 58.307 30.769 9.06 0.00 31.39 3.68
2991 5237 7.335422 TGCTCAAGGAGTTTTAAAATTTTTGCA 59.665 29.630 9.06 5.55 31.39 4.08
2992 5238 8.180920 GCTCAAGGAGTTTTAAAATTTTTGCAA 58.819 29.630 9.06 0.00 31.39 4.08
3119 5365 6.668541 ATTCACACACTCAGAAAATATCCG 57.331 37.500 0.00 0.00 0.00 4.18
3120 5366 5.147330 TCACACACTCAGAAAATATCCGT 57.853 39.130 0.00 0.00 0.00 4.69
3121 5367 4.929211 TCACACACTCAGAAAATATCCGTG 59.071 41.667 0.00 0.00 0.00 4.94
3122 5368 4.929211 CACACACTCAGAAAATATCCGTGA 59.071 41.667 0.00 0.00 0.00 4.35
3123 5369 5.408299 CACACACTCAGAAAATATCCGTGAA 59.592 40.000 0.00 0.00 0.00 3.18
3124 5370 5.408604 ACACACTCAGAAAATATCCGTGAAC 59.591 40.000 0.00 0.00 0.00 3.18
3125 5371 5.639506 CACACTCAGAAAATATCCGTGAACT 59.360 40.000 0.00 0.00 0.00 3.01
3126 5372 6.147821 CACACTCAGAAAATATCCGTGAACTT 59.852 38.462 0.00 0.00 0.00 2.66
3127 5373 7.330946 CACACTCAGAAAATATCCGTGAACTTA 59.669 37.037 0.00 0.00 0.00 2.24
3128 5374 7.876068 ACACTCAGAAAATATCCGTGAACTTAA 59.124 33.333 0.00 0.00 0.00 1.85
3129 5375 8.883731 CACTCAGAAAATATCCGTGAACTTAAT 58.116 33.333 0.00 0.00 0.00 1.40
3190 5436 9.208022 TGAAATGTTTGTGTTTTTATGTTCACA 57.792 25.926 0.00 0.00 38.71 3.58
3204 5450 9.907576 TTTTATGTTCACAATTTTTAACAAGCG 57.092 25.926 0.00 0.00 35.63 4.68
3205 5451 8.635877 TTATGTTCACAATTTTTAACAAGCGT 57.364 26.923 0.00 0.00 35.63 5.07
3206 5452 6.952935 TGTTCACAATTTTTAACAAGCGTT 57.047 29.167 0.00 0.00 39.24 4.84
3207 5453 6.983910 TGTTCACAATTTTTAACAAGCGTTC 58.016 32.000 0.00 0.00 36.52 3.95
3208 5454 6.586463 TGTTCACAATTTTTAACAAGCGTTCA 59.414 30.769 0.00 0.00 36.52 3.18
3209 5455 7.276658 TGTTCACAATTTTTAACAAGCGTTCAT 59.723 29.630 0.00 0.00 36.52 2.57
3210 5456 7.159437 TCACAATTTTTAACAAGCGTTCATG 57.841 32.000 0.00 0.00 36.52 3.07
3211 5457 6.975197 TCACAATTTTTAACAAGCGTTCATGA 59.025 30.769 0.00 0.00 36.52 3.07
3214 5460 8.825745 ACAATTTTTAACAAGCGTTCATGAATT 58.174 25.926 12.12 3.21 36.52 2.17
3257 5503 8.443937 AGAAAGAGAAATAAAACTACACATCGC 58.556 33.333 0.00 0.00 0.00 4.58
3258 5504 7.667043 AAGAGAAATAAAACTACACATCGCA 57.333 32.000 0.00 0.00 0.00 5.10
3259 5505 7.061752 AGAGAAATAAAACTACACATCGCAC 57.938 36.000 0.00 0.00 0.00 5.34
3260 5506 6.649141 AGAGAAATAAAACTACACATCGCACA 59.351 34.615 0.00 0.00 0.00 4.57
3261 5507 6.599437 AGAAATAAAACTACACATCGCACAC 58.401 36.000 0.00 0.00 0.00 3.82
3262 5508 2.941891 AAAACTACACATCGCACACG 57.058 45.000 0.00 0.00 42.01 4.49
3263 5509 0.511221 AAACTACACATCGCACACGC 59.489 50.000 0.00 0.00 39.84 5.34
3265 5511 0.319555 ACTACACATCGCACACGCTT 60.320 50.000 0.00 0.00 39.84 4.68
3266 5512 1.068125 ACTACACATCGCACACGCTTA 60.068 47.619 0.00 0.00 39.84 3.09
3267 5513 1.320555 CTACACATCGCACACGCTTAC 59.679 52.381 0.00 0.00 39.84 2.34
3268 5514 0.598942 ACACATCGCACACGCTTACA 60.599 50.000 0.00 0.00 39.84 2.41
3269 5515 0.721154 CACATCGCACACGCTTACAT 59.279 50.000 0.00 0.00 39.84 2.29
3270 5516 1.923864 CACATCGCACACGCTTACATA 59.076 47.619 0.00 0.00 39.84 2.29
3272 5518 2.603110 ACATCGCACACGCTTACATAAG 59.397 45.455 0.00 0.00 39.84 1.73
3273 5519 1.635844 TCGCACACGCTTACATAAGG 58.364 50.000 1.00 0.00 39.84 2.69
3275 5521 1.014352 GCACACGCTTACATAAGGGG 58.986 55.000 17.14 10.14 46.70 4.79
3276 5522 1.014352 CACACGCTTACATAAGGGGC 58.986 55.000 17.14 0.00 46.70 5.80
3277 5523 0.107361 ACACGCTTACATAAGGGGCC 60.107 55.000 17.14 0.00 46.70 5.80
3278 5524 0.818040 CACGCTTACATAAGGGGCCC 60.818 60.000 17.12 17.12 46.70 5.80
3279 5525 1.597027 CGCTTACATAAGGGGCCCG 60.597 63.158 18.95 5.08 41.07 6.13
3280 5526 1.897137 GCTTACATAAGGGGCCCGC 60.897 63.158 18.95 9.16 33.95 6.13
3281 5527 1.529796 CTTACATAAGGGGCCCGCA 59.470 57.895 18.95 9.58 0.00 5.69
3282 5528 0.106918 CTTACATAAGGGGCCCGCAA 60.107 55.000 18.95 7.00 0.00 4.85
3284 5530 0.179004 TACATAAGGGGCCCGCAATG 60.179 55.000 24.49 24.49 0.00 2.82
3285 5531 1.152777 CATAAGGGGCCCGCAATGA 60.153 57.895 22.83 6.33 0.00 2.57
3286 5532 1.152756 ATAAGGGGCCCGCAATGAC 60.153 57.895 18.95 0.00 0.00 3.06
3288 5534 2.265467 TAAGGGGCCCGCAATGACTC 62.265 60.000 18.95 0.00 0.00 3.36
3293 5539 1.220749 GCCCGCAATGACTCCACTA 59.779 57.895 0.00 0.00 0.00 2.74
3294 5540 0.179045 GCCCGCAATGACTCCACTAT 60.179 55.000 0.00 0.00 0.00 2.12
3295 5541 1.070134 GCCCGCAATGACTCCACTATA 59.930 52.381 0.00 0.00 0.00 1.31
3296 5542 2.868044 GCCCGCAATGACTCCACTATAG 60.868 54.545 0.00 0.00 0.00 1.31
3338 5584 9.181061 TCATTTCATTGTAGATGATGAATGTGT 57.819 29.630 10.69 0.00 40.72 3.72
3339 5585 9.797556 CATTTCATTGTAGATGATGAATGTGTT 57.202 29.630 0.24 0.00 40.72 3.32
3340 5586 9.797556 ATTTCATTGTAGATGATGAATGTGTTG 57.202 29.630 0.24 0.00 40.72 3.33
3341 5587 7.926674 TCATTGTAGATGATGAATGTGTTGT 57.073 32.000 0.00 0.00 29.82 3.32
3368 5614 2.605257 TGGGACCGTCTATCCATAAGG 58.395 52.381 0.00 0.00 38.06 2.69
3394 5640 9.423061 GTACCTGAAAATAAATTTGCATCTTGT 57.577 29.630 0.00 0.00 34.92 3.16
3404 5650 0.609957 TGCATCTTGTTCCTGCCAGG 60.610 55.000 3.69 3.69 35.02 4.45
3406 5652 1.377725 ATCTTGTTCCTGCCAGGCG 60.378 57.895 5.66 1.26 34.61 5.52
3414 5661 4.147449 CTGCCAGGCGTCGGATCA 62.147 66.667 7.03 0.00 0.00 2.92
3429 5676 0.533755 GATCAGGGATGAACGGCCAG 60.534 60.000 2.24 0.00 0.00 4.85
3439 5686 0.827368 GAACGGCCAGATCTCCTTCT 59.173 55.000 2.24 0.00 0.00 2.85
3440 5687 1.208293 GAACGGCCAGATCTCCTTCTT 59.792 52.381 2.24 0.00 0.00 2.52
3453 5700 0.977395 CCTTCTTCTCCTCCAACCGT 59.023 55.000 0.00 0.00 0.00 4.83
3458 5705 2.758979 TCTTCTCCTCCAACCGTATGTC 59.241 50.000 0.00 0.00 0.00 3.06
3461 5708 1.762957 CTCCTCCAACCGTATGTCCAT 59.237 52.381 0.00 0.00 0.00 3.41
3466 5713 2.835156 TCCAACCGTATGTCCATCTTGA 59.165 45.455 0.00 0.00 0.00 3.02
3495 5746 2.284625 TGCACCCTCCGATCCAGT 60.285 61.111 0.00 0.00 0.00 4.00
3496 5747 2.359169 TGCACCCTCCGATCCAGTC 61.359 63.158 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.067896 GTTTGTATCATGGCATCCGATCT 58.932 43.478 0.00 0.00 0.00 2.75
65 67 3.505464 TTTTCTCCGGCGTTTTCAAAA 57.495 38.095 6.01 0.96 0.00 2.44
67 69 2.287909 CCATTTTCTCCGGCGTTTTCAA 60.288 45.455 6.01 0.00 0.00 2.69
179 190 2.699954 TCTCAATTTCAAGGGCTCGAC 58.300 47.619 0.00 0.00 0.00 4.20
223 234 0.753479 TGCAGGCGGTCCTTGAAAAA 60.753 50.000 0.00 0.00 41.93 1.94
275 298 2.181021 GTCGTCCGACGGCTCATT 59.819 61.111 18.10 0.00 43.82 2.57
334 357 7.220740 AGAGTTTTCCCTTCTTCTTTCTAGTG 58.779 38.462 0.00 0.00 0.00 2.74
335 358 7.381789 AGAGTTTTCCCTTCTTCTTTCTAGT 57.618 36.000 0.00 0.00 0.00 2.57
349 372 4.321304 GCTGGAGCTAAAAAGAGTTTTCCC 60.321 45.833 0.00 0.00 38.01 3.97
358 382 4.260948 GGATGAATCGCTGGAGCTAAAAAG 60.261 45.833 0.00 0.00 39.32 2.27
403 434 5.650266 CAGGTACCATCCTCTACTGCTATAG 59.350 48.000 15.94 0.00 35.37 1.31
430 461 1.599047 CCTGTTCTCTGACCGCCAT 59.401 57.895 0.00 0.00 0.00 4.40
464 495 1.700186 GGTTCCACCTCACTTCTCCTT 59.300 52.381 0.00 0.00 34.73 3.36
475 506 0.178990 GTTTCAGCAGGGTTCCACCT 60.179 55.000 0.00 0.00 43.08 4.00
503 534 3.427773 GCCGAAACTCTACATCTTCGTCT 60.428 47.826 0.00 0.00 39.14 4.18
575 607 5.462398 TCGTTTTCTCTTCTTCCTTCTTTCG 59.538 40.000 0.00 0.00 0.00 3.46
619 652 3.004734 CCCACACAAAACCATTCTGAGTC 59.995 47.826 0.00 0.00 0.00 3.36
620 653 2.958355 CCCACACAAAACCATTCTGAGT 59.042 45.455 0.00 0.00 0.00 3.41
623 656 1.270252 GGCCCACACAAAACCATTCTG 60.270 52.381 0.00 0.00 0.00 3.02
628 661 1.760086 CCTGGCCCACACAAAACCA 60.760 57.895 0.00 0.00 0.00 3.67
689 728 2.290367 CGCAAACTGGAGACAAACATGA 59.710 45.455 0.00 0.00 42.06 3.07
703 742 0.661020 CGTGTTTTCTCCCGCAAACT 59.339 50.000 0.00 0.00 34.52 2.66
744 783 2.353208 GCCATCCAATGCGGTTTTGTAA 60.353 45.455 0.00 0.00 35.57 2.41
800 857 0.472734 AGGGCATCTCTAAGGCGGAT 60.473 55.000 0.00 0.00 0.00 4.18
809 866 2.196742 TGGATGGTTAGGGCATCTCT 57.803 50.000 0.00 0.00 0.00 3.10
845 902 8.862085 CAAAAACCCCTCCTAAATTTTGTACTA 58.138 33.333 0.00 0.00 34.64 1.82
862 919 5.307204 GGTTAAAATGGTACCAAAAACCCC 58.693 41.667 25.84 17.14 36.06 4.95
868 926 6.651975 ATCAACGGTTAAAATGGTACCAAA 57.348 33.333 20.76 5.56 32.12 3.28
954 1012 1.657487 CGTGCGTGACTCGTGAGTT 60.657 57.895 3.69 0.00 42.66 3.01
987 3112 9.868277 GAAGATATCTGCATGCTAAATAGTAGT 57.132 33.333 20.33 0.00 0.00 2.73
990 3115 9.217278 CAAGAAGATATCTGCATGCTAAATAGT 57.783 33.333 20.33 0.00 38.79 2.12
1008 3133 3.252701 CAGAGCAAAGCACACAAGAAGAT 59.747 43.478 0.00 0.00 0.00 2.40
1016 3141 3.666374 CGAGAATTCAGAGCAAAGCACAC 60.666 47.826 8.44 0.00 0.00 3.82
1048 3173 4.891727 GGACGACGGCATGGCGAT 62.892 66.667 43.12 28.37 0.00 4.58
1296 3424 3.703127 GGCGAGGAAGGGAACGGT 61.703 66.667 0.00 0.00 0.00 4.83
1599 3786 1.080093 GGTGACAATCTCGTCGGCA 60.080 57.895 0.00 0.00 38.84 5.69
1781 4012 2.435693 GGATGCTCCACGTAGGCCT 61.436 63.158 11.78 11.78 36.28 5.19
1944 4184 0.973632 ACCCGAAGCAGATGTACACA 59.026 50.000 0.00 0.00 0.00 3.72
2502 4748 3.255379 GCTAAGCGCGCGTTAGCT 61.255 61.111 39.03 26.81 45.99 3.32
2504 4750 2.615618 CAGCTAAGCGCGCGTTAG 59.384 61.111 30.40 30.40 45.59 2.34
2512 4758 3.195698 GAACGGGGCAGCTAAGCG 61.196 66.667 0.00 0.00 34.64 4.68
2513 4759 1.369839 GAAGAACGGGGCAGCTAAGC 61.370 60.000 0.00 0.00 0.00 3.09
2514 4760 1.084370 CGAAGAACGGGGCAGCTAAG 61.084 60.000 0.00 0.00 38.46 2.18
2519 4765 2.815647 GAGCGAAGAACGGGGCAG 60.816 66.667 0.00 0.00 42.83 4.85
2520 4766 4.735132 CGAGCGAAGAACGGGGCA 62.735 66.667 0.00 0.00 42.83 5.36
2521 4767 4.736896 ACGAGCGAAGAACGGGGC 62.737 66.667 0.00 0.00 42.83 5.80
2522 4768 2.048503 AACGAGCGAAGAACGGGG 60.049 61.111 0.00 0.00 42.83 5.73
2523 4769 2.380410 CCAACGAGCGAAGAACGGG 61.380 63.158 0.00 0.00 42.83 5.28
2525 4771 1.068474 AATCCAACGAGCGAAGAACG 58.932 50.000 0.00 0.00 45.66 3.95
2526 4772 2.066262 TCAATCCAACGAGCGAAGAAC 58.934 47.619 0.00 0.00 0.00 3.01
2527 4773 2.066262 GTCAATCCAACGAGCGAAGAA 58.934 47.619 0.00 0.00 0.00 2.52
2528 4774 1.272490 AGTCAATCCAACGAGCGAAGA 59.728 47.619 0.00 0.00 0.00 2.87
2529 4775 1.656095 GAGTCAATCCAACGAGCGAAG 59.344 52.381 0.00 0.00 0.00 3.79
2530 4776 1.272490 AGAGTCAATCCAACGAGCGAA 59.728 47.619 0.00 0.00 0.00 4.70
2532 4778 1.714794 AAGAGTCAATCCAACGAGCG 58.285 50.000 0.00 0.00 0.00 5.03
2533 4779 5.803020 ATAAAAGAGTCAATCCAACGAGC 57.197 39.130 0.00 0.00 0.00 5.03
2535 4781 9.309516 GTACATATAAAAGAGTCAATCCAACGA 57.690 33.333 0.00 0.00 0.00 3.85
2536 4782 9.314321 AGTACATATAAAAGAGTCAATCCAACG 57.686 33.333 0.00 0.00 0.00 4.10
2539 4785 9.982651 GCTAGTACATATAAAAGAGTCAATCCA 57.017 33.333 0.00 0.00 0.00 3.41
2555 4801 9.710900 CCAATGACAATAATCTGCTAGTACATA 57.289 33.333 0.00 0.00 0.00 2.29
2556 4802 8.213679 ACCAATGACAATAATCTGCTAGTACAT 58.786 33.333 0.00 0.00 0.00 2.29
2557 4803 7.564793 ACCAATGACAATAATCTGCTAGTACA 58.435 34.615 0.00 0.00 0.00 2.90
2558 4804 8.338259 CAACCAATGACAATAATCTGCTAGTAC 58.662 37.037 0.00 0.00 0.00 2.73
2559 4805 8.046708 ACAACCAATGACAATAATCTGCTAGTA 58.953 33.333 0.00 0.00 0.00 1.82
2561 4807 7.325660 ACAACCAATGACAATAATCTGCTAG 57.674 36.000 0.00 0.00 0.00 3.42
2562 4808 7.701539 AACAACCAATGACAATAATCTGCTA 57.298 32.000 0.00 0.00 0.00 3.49
2565 4811 8.991243 ATGAAACAACCAATGACAATAATCTG 57.009 30.769 0.00 0.00 0.00 2.90
2570 4816 9.775854 ATCAAAATGAAACAACCAATGACAATA 57.224 25.926 0.00 0.00 0.00 1.90
2571 4817 8.680039 ATCAAAATGAAACAACCAATGACAAT 57.320 26.923 0.00 0.00 0.00 2.71
2572 4818 7.986320 AGATCAAAATGAAACAACCAATGACAA 59.014 29.630 0.00 0.00 0.00 3.18
2573 4819 7.499292 AGATCAAAATGAAACAACCAATGACA 58.501 30.769 0.00 0.00 0.00 3.58
2574 4820 7.951530 AGATCAAAATGAAACAACCAATGAC 57.048 32.000 0.00 0.00 0.00 3.06
2575 4821 8.961294 AAAGATCAAAATGAAACAACCAATGA 57.039 26.923 0.00 0.00 0.00 2.57
2576 4822 9.654417 GAAAAGATCAAAATGAAACAACCAATG 57.346 29.630 0.00 0.00 0.00 2.82
2577 4823 9.617523 AGAAAAGATCAAAATGAAACAACCAAT 57.382 25.926 0.00 0.00 0.00 3.16
2578 4824 8.881743 CAGAAAAGATCAAAATGAAACAACCAA 58.118 29.630 0.00 0.00 0.00 3.67
2580 4826 8.330302 CACAGAAAAGATCAAAATGAAACAACC 58.670 33.333 0.00 0.00 0.00 3.77
2581 4827 8.872845 ACACAGAAAAGATCAAAATGAAACAAC 58.127 29.630 0.00 0.00 0.00 3.32
2582 4828 9.434420 AACACAGAAAAGATCAAAATGAAACAA 57.566 25.926 0.00 0.00 0.00 2.83
2583 4829 8.871862 CAACACAGAAAAGATCAAAATGAAACA 58.128 29.630 0.00 0.00 0.00 2.83
2584 4830 8.330302 CCAACACAGAAAAGATCAAAATGAAAC 58.670 33.333 0.00 0.00 0.00 2.78
2585 4831 7.011295 GCCAACACAGAAAAGATCAAAATGAAA 59.989 33.333 0.00 0.00 0.00 2.69
2586 4832 6.479660 GCCAACACAGAAAAGATCAAAATGAA 59.520 34.615 0.00 0.00 0.00 2.57
2587 4833 5.984926 GCCAACACAGAAAAGATCAAAATGA 59.015 36.000 0.00 0.00 0.00 2.57
2588 4834 5.754406 TGCCAACACAGAAAAGATCAAAATG 59.246 36.000 0.00 0.00 0.00 2.32
2589 4835 5.916318 TGCCAACACAGAAAAGATCAAAAT 58.084 33.333 0.00 0.00 0.00 1.82
2590 4836 5.336150 TGCCAACACAGAAAAGATCAAAA 57.664 34.783 0.00 0.00 0.00 2.44
2591 4837 4.998671 TGCCAACACAGAAAAGATCAAA 57.001 36.364 0.00 0.00 0.00 2.69
2592 4838 6.209192 ACATATGCCAACACAGAAAAGATCAA 59.791 34.615 1.58 0.00 0.00 2.57
2593 4839 5.711506 ACATATGCCAACACAGAAAAGATCA 59.288 36.000 1.58 0.00 0.00 2.92
2594 4840 6.199937 ACATATGCCAACACAGAAAAGATC 57.800 37.500 1.58 0.00 0.00 2.75
2595 4841 6.594788 AACATATGCCAACACAGAAAAGAT 57.405 33.333 1.58 0.00 0.00 2.40
2596 4842 6.403866 AAACATATGCCAACACAGAAAAGA 57.596 33.333 1.58 0.00 0.00 2.52
2597 4843 7.481275 AAAAACATATGCCAACACAGAAAAG 57.519 32.000 1.58 0.00 0.00 2.27
2618 4864 5.354842 AAAACACCCCCGAAACATAAAAA 57.645 34.783 0.00 0.00 0.00 1.94
2619 4865 5.354842 AAAAACACCCCCGAAACATAAAA 57.645 34.783 0.00 0.00 0.00 1.52
2638 4884 9.857957 AACCAAACACGATTTACTAAAGAAAAA 57.142 25.926 0.00 0.00 0.00 1.94
2639 4885 9.857957 AAACCAAACACGATTTACTAAAGAAAA 57.142 25.926 0.00 0.00 0.00 2.29
2640 4886 9.505995 GAAACCAAACACGATTTACTAAAGAAA 57.494 29.630 0.00 0.00 0.00 2.52
2641 4887 8.895737 AGAAACCAAACACGATTTACTAAAGAA 58.104 29.630 0.00 0.00 0.00 2.52
2642 4888 8.441312 AGAAACCAAACACGATTTACTAAAGA 57.559 30.769 0.00 0.00 0.00 2.52
2646 4892 9.491675 TCAATAGAAACCAAACACGATTTACTA 57.508 29.630 0.00 0.00 0.00 1.82
2647 4893 8.385898 TCAATAGAAACCAAACACGATTTACT 57.614 30.769 0.00 0.00 0.00 2.24
2648 4894 9.113876 CTTCAATAGAAACCAAACACGATTTAC 57.886 33.333 0.00 0.00 32.35 2.01
2649 4895 9.058174 TCTTCAATAGAAACCAAACACGATTTA 57.942 29.630 0.00 0.00 32.35 1.40
2650 4896 7.936584 TCTTCAATAGAAACCAAACACGATTT 58.063 30.769 0.00 0.00 32.35 2.17
2651 4897 7.504924 TCTTCAATAGAAACCAAACACGATT 57.495 32.000 0.00 0.00 32.35 3.34
2652 4898 7.504924 TTCTTCAATAGAAACCAAACACGAT 57.495 32.000 0.00 0.00 39.90 3.73
2653 4899 6.928979 TTCTTCAATAGAAACCAAACACGA 57.071 33.333 0.00 0.00 39.90 4.35
2683 4929 8.463930 AATAACTTCATTCTTCTGTTGGAACA 57.536 30.769 0.00 0.00 37.37 3.18
2684 4930 9.185192 CAAATAACTTCATTCTTCTGTTGGAAC 57.815 33.333 0.00 0.00 0.00 3.62
2685 4931 8.912988 ACAAATAACTTCATTCTTCTGTTGGAA 58.087 29.630 0.00 0.00 0.00 3.53
2686 4932 8.463930 ACAAATAACTTCATTCTTCTGTTGGA 57.536 30.769 0.00 0.00 0.00 3.53
2687 4933 8.971321 CAACAAATAACTTCATTCTTCTGTTGG 58.029 33.333 0.00 0.00 0.00 3.77
2688 4934 8.482429 GCAACAAATAACTTCATTCTTCTGTTG 58.518 33.333 0.00 0.00 35.11 3.33
2689 4935 7.379529 CGCAACAAATAACTTCATTCTTCTGTT 59.620 33.333 0.00 0.00 0.00 3.16
2690 4936 6.857964 CGCAACAAATAACTTCATTCTTCTGT 59.142 34.615 0.00 0.00 0.00 3.41
2691 4937 6.857964 ACGCAACAAATAACTTCATTCTTCTG 59.142 34.615 0.00 0.00 0.00 3.02
2692 4938 6.857964 CACGCAACAAATAACTTCATTCTTCT 59.142 34.615 0.00 0.00 0.00 2.85
2693 4939 6.855914 TCACGCAACAAATAACTTCATTCTTC 59.144 34.615 0.00 0.00 0.00 2.87
2694 4940 6.734137 TCACGCAACAAATAACTTCATTCTT 58.266 32.000 0.00 0.00 0.00 2.52
2695 4941 6.312399 TCACGCAACAAATAACTTCATTCT 57.688 33.333 0.00 0.00 0.00 2.40
2696 4942 7.410728 CCAATCACGCAACAAATAACTTCATTC 60.411 37.037 0.00 0.00 0.00 2.67
2697 4943 6.365789 CCAATCACGCAACAAATAACTTCATT 59.634 34.615 0.00 0.00 0.00 2.57
2698 4944 5.863397 CCAATCACGCAACAAATAACTTCAT 59.137 36.000 0.00 0.00 0.00 2.57
2699 4945 5.218885 CCAATCACGCAACAAATAACTTCA 58.781 37.500 0.00 0.00 0.00 3.02
2700 4946 4.621034 CCCAATCACGCAACAAATAACTTC 59.379 41.667 0.00 0.00 0.00 3.01
2701 4947 4.555262 CCCAATCACGCAACAAATAACTT 58.445 39.130 0.00 0.00 0.00 2.66
2702 4948 3.056891 CCCCAATCACGCAACAAATAACT 60.057 43.478 0.00 0.00 0.00 2.24
2703 4949 3.249917 CCCCAATCACGCAACAAATAAC 58.750 45.455 0.00 0.00 0.00 1.89
2704 4950 2.353208 GCCCCAATCACGCAACAAATAA 60.353 45.455 0.00 0.00 0.00 1.40
2705 4951 1.203523 GCCCCAATCACGCAACAAATA 59.796 47.619 0.00 0.00 0.00 1.40
2706 4952 0.037419 GCCCCAATCACGCAACAAAT 60.037 50.000 0.00 0.00 0.00 2.32
2707 4953 1.365633 GCCCCAATCACGCAACAAA 59.634 52.632 0.00 0.00 0.00 2.83
2708 4954 2.913765 CGCCCCAATCACGCAACAA 61.914 57.895 0.00 0.00 0.00 2.83
2709 4955 3.361158 CGCCCCAATCACGCAACA 61.361 61.111 0.00 0.00 0.00 3.33
2710 4956 3.361977 ACGCCCCAATCACGCAAC 61.362 61.111 0.00 0.00 0.00 4.17
2711 4957 3.361158 CACGCCCCAATCACGCAA 61.361 61.111 0.00 0.00 0.00 4.85
2712 4958 4.634703 ACACGCCCCAATCACGCA 62.635 61.111 0.00 0.00 0.00 5.24
2713 4959 1.579084 TAAACACGCCCCAATCACGC 61.579 55.000 0.00 0.00 0.00 5.34
2714 4960 0.167251 GTAAACACGCCCCAATCACG 59.833 55.000 0.00 0.00 0.00 4.35
2715 4961 1.240256 TGTAAACACGCCCCAATCAC 58.760 50.000 0.00 0.00 0.00 3.06
2716 4962 1.815613 CATGTAAACACGCCCCAATCA 59.184 47.619 0.00 0.00 0.00 2.57
2717 4963 1.816224 ACATGTAAACACGCCCCAATC 59.184 47.619 0.00 0.00 0.00 2.67
2718 4964 1.917872 ACATGTAAACACGCCCCAAT 58.082 45.000 0.00 0.00 0.00 3.16
2719 4965 1.693627 AACATGTAAACACGCCCCAA 58.306 45.000 0.00 0.00 0.00 4.12
2720 4966 1.609555 GAAACATGTAAACACGCCCCA 59.390 47.619 0.00 0.00 0.00 4.96
2721 4967 1.400500 CGAAACATGTAAACACGCCCC 60.400 52.381 0.00 0.00 0.00 5.80
2722 4968 1.400500 CCGAAACATGTAAACACGCCC 60.400 52.381 0.00 0.00 0.00 6.13
2723 4969 1.958417 CCGAAACATGTAAACACGCC 58.042 50.000 0.00 0.00 0.00 5.68
2724 4970 1.323791 GCCGAAACATGTAAACACGC 58.676 50.000 0.00 0.00 0.00 5.34
2725 4971 1.533731 AGGCCGAAACATGTAAACACG 59.466 47.619 0.00 1.09 0.00 4.49
2726 4972 3.305110 CAAGGCCGAAACATGTAAACAC 58.695 45.455 0.00 0.00 0.00 3.32
2727 4973 2.294791 CCAAGGCCGAAACATGTAAACA 59.705 45.455 0.00 0.00 0.00 2.83
2728 4974 2.295070 ACCAAGGCCGAAACATGTAAAC 59.705 45.455 0.00 0.00 0.00 2.01
2729 4975 2.294791 CACCAAGGCCGAAACATGTAAA 59.705 45.455 0.00 0.00 0.00 2.01
2730 4976 1.883275 CACCAAGGCCGAAACATGTAA 59.117 47.619 0.00 0.00 0.00 2.41
2731 4977 1.202830 ACACCAAGGCCGAAACATGTA 60.203 47.619 0.00 0.00 0.00 2.29
2732 4978 0.467290 ACACCAAGGCCGAAACATGT 60.467 50.000 0.00 0.00 0.00 3.21
2733 4979 0.673437 AACACCAAGGCCGAAACATG 59.327 50.000 0.00 0.00 0.00 3.21
2734 4980 0.673437 CAACACCAAGGCCGAAACAT 59.327 50.000 0.00 0.00 0.00 2.71
2735 4981 1.388065 CCAACACCAAGGCCGAAACA 61.388 55.000 0.00 0.00 0.00 2.83
2736 4982 1.362355 CCAACACCAAGGCCGAAAC 59.638 57.895 0.00 0.00 0.00 2.78
2737 4983 1.076632 ACCAACACCAAGGCCGAAA 60.077 52.632 0.00 0.00 0.00 3.46
2738 4984 1.527380 GACCAACACCAAGGCCGAA 60.527 57.895 0.00 0.00 0.00 4.30
2739 4985 2.112297 GACCAACACCAAGGCCGA 59.888 61.111 0.00 0.00 0.00 5.54
2740 4986 2.983592 GGACCAACACCAAGGCCG 60.984 66.667 0.00 0.00 0.00 6.13
2741 4987 1.228862 ATGGACCAACACCAAGGCC 60.229 57.895 0.00 0.00 40.93 5.19
2742 4988 0.539438 TCATGGACCAACACCAAGGC 60.539 55.000 0.00 0.00 40.93 4.35
2743 4989 1.820519 CATCATGGACCAACACCAAGG 59.179 52.381 0.00 0.00 40.93 3.61
2744 4990 2.794103 TCATCATGGACCAACACCAAG 58.206 47.619 0.00 0.00 40.93 3.61
2745 4991 2.967745 TCATCATGGACCAACACCAA 57.032 45.000 0.00 0.00 40.93 3.67
2746 4992 3.090790 CAATCATCATGGACCAACACCA 58.909 45.455 0.00 0.00 41.83 4.17
2747 4993 3.091545 ACAATCATCATGGACCAACACC 58.908 45.455 0.00 0.00 0.00 4.16
2748 4994 4.789012 AACAATCATCATGGACCAACAC 57.211 40.909 0.00 0.00 0.00 3.32
2749 4995 4.831710 TCAAACAATCATCATGGACCAACA 59.168 37.500 0.00 0.00 0.00 3.33
2750 4996 5.389859 TCAAACAATCATCATGGACCAAC 57.610 39.130 0.00 0.00 0.00 3.77
2751 4997 4.082081 GCTCAAACAATCATCATGGACCAA 60.082 41.667 0.00 0.00 0.00 3.67
2752 4998 3.444742 GCTCAAACAATCATCATGGACCA 59.555 43.478 0.00 0.00 0.00 4.02
2753 4999 3.181483 GGCTCAAACAATCATCATGGACC 60.181 47.826 0.00 0.00 0.00 4.46
2754 5000 3.698040 AGGCTCAAACAATCATCATGGAC 59.302 43.478 0.00 0.00 0.00 4.02
2755 5001 3.972133 AGGCTCAAACAATCATCATGGA 58.028 40.909 0.00 0.00 0.00 3.41
2756 5002 6.040054 TCAATAGGCTCAAACAATCATCATGG 59.960 38.462 0.00 0.00 0.00 3.66
2757 5003 7.034685 TCAATAGGCTCAAACAATCATCATG 57.965 36.000 0.00 0.00 0.00 3.07
2758 5004 7.649533 TTCAATAGGCTCAAACAATCATCAT 57.350 32.000 0.00 0.00 0.00 2.45
2759 5005 7.465353 TTTCAATAGGCTCAAACAATCATCA 57.535 32.000 0.00 0.00 0.00 3.07
2760 5006 8.031277 AGTTTTCAATAGGCTCAAACAATCATC 58.969 33.333 0.00 0.00 31.06 2.92
2761 5007 7.899973 AGTTTTCAATAGGCTCAAACAATCAT 58.100 30.769 0.00 0.00 31.06 2.45
2762 5008 7.288810 AGTTTTCAATAGGCTCAAACAATCA 57.711 32.000 0.00 0.00 31.06 2.57
2763 5009 6.808704 GGAGTTTTCAATAGGCTCAAACAATC 59.191 38.462 0.00 0.00 31.06 2.67
2764 5010 6.494835 AGGAGTTTTCAATAGGCTCAAACAAT 59.505 34.615 0.00 0.00 31.06 2.71
2765 5011 5.833131 AGGAGTTTTCAATAGGCTCAAACAA 59.167 36.000 0.00 0.00 31.06 2.83
2766 5012 5.385198 AGGAGTTTTCAATAGGCTCAAACA 58.615 37.500 0.00 0.00 31.06 2.83
2767 5013 5.966742 AGGAGTTTTCAATAGGCTCAAAC 57.033 39.130 0.00 0.00 0.00 2.93
2768 5014 7.339466 GGAATAGGAGTTTTCAATAGGCTCAAA 59.661 37.037 0.00 0.00 0.00 2.69
2769 5015 6.828785 GGAATAGGAGTTTTCAATAGGCTCAA 59.171 38.462 0.00 0.00 0.00 3.02
2770 5016 6.069673 TGGAATAGGAGTTTTCAATAGGCTCA 60.070 38.462 0.00 0.00 0.00 4.26
2771 5017 6.261158 GTGGAATAGGAGTTTTCAATAGGCTC 59.739 42.308 0.00 0.00 0.00 4.70
2772 5018 6.122964 GTGGAATAGGAGTTTTCAATAGGCT 58.877 40.000 0.00 0.00 0.00 4.58
2773 5019 5.885912 TGTGGAATAGGAGTTTTCAATAGGC 59.114 40.000 0.00 0.00 0.00 3.93
2774 5020 7.112779 AGTGTGGAATAGGAGTTTTCAATAGG 58.887 38.462 0.00 0.00 0.00 2.57
2775 5021 9.667107 TTAGTGTGGAATAGGAGTTTTCAATAG 57.333 33.333 0.00 0.00 0.00 1.73
2777 5023 8.934023 TTTAGTGTGGAATAGGAGTTTTCAAT 57.066 30.769 0.00 0.00 0.00 2.57
2778 5024 8.626526 GTTTTAGTGTGGAATAGGAGTTTTCAA 58.373 33.333 0.00 0.00 0.00 2.69
2779 5025 7.776030 TGTTTTAGTGTGGAATAGGAGTTTTCA 59.224 33.333 0.00 0.00 0.00 2.69
2780 5026 8.161699 TGTTTTAGTGTGGAATAGGAGTTTTC 57.838 34.615 0.00 0.00 0.00 2.29
2781 5027 7.778382 ACTGTTTTAGTGTGGAATAGGAGTTTT 59.222 33.333 0.00 0.00 38.49 2.43
2782 5028 7.287810 ACTGTTTTAGTGTGGAATAGGAGTTT 58.712 34.615 0.00 0.00 38.49 2.66
2783 5029 6.838382 ACTGTTTTAGTGTGGAATAGGAGTT 58.162 36.000 0.00 0.00 38.49 3.01
2784 5030 6.435292 ACTGTTTTAGTGTGGAATAGGAGT 57.565 37.500 0.00 0.00 38.49 3.85
2785 5031 6.934645 TCAACTGTTTTAGTGTGGAATAGGAG 59.065 38.462 0.00 0.00 40.26 3.69
2786 5032 6.833041 TCAACTGTTTTAGTGTGGAATAGGA 58.167 36.000 0.00 0.00 40.26 2.94
2787 5033 7.504924 TTCAACTGTTTTAGTGTGGAATAGG 57.495 36.000 0.00 0.00 40.26 2.57
2788 5034 9.398170 CAATTCAACTGTTTTAGTGTGGAATAG 57.602 33.333 0.00 0.00 40.26 1.73
2789 5035 8.908903 ACAATTCAACTGTTTTAGTGTGGAATA 58.091 29.630 4.56 0.00 40.26 1.75
2790 5036 7.781056 ACAATTCAACTGTTTTAGTGTGGAAT 58.219 30.769 4.56 0.00 40.26 3.01
2791 5037 7.164230 ACAATTCAACTGTTTTAGTGTGGAA 57.836 32.000 4.56 0.00 40.26 3.53
2792 5038 6.767524 ACAATTCAACTGTTTTAGTGTGGA 57.232 33.333 4.56 0.00 40.26 4.02
2793 5039 7.032580 TCAACAATTCAACTGTTTTAGTGTGG 58.967 34.615 5.77 3.86 40.26 4.17
2794 5040 8.533965 CATCAACAATTCAACTGTTTTAGTGTG 58.466 33.333 5.77 2.55 40.26 3.82
2795 5041 8.250332 ACATCAACAATTCAACTGTTTTAGTGT 58.750 29.630 0.00 0.00 40.26 3.55
2796 5042 8.633075 ACATCAACAATTCAACTGTTTTAGTG 57.367 30.769 0.00 0.00 40.26 2.74
2800 5046 8.994429 TGTTACATCAACAATTCAACTGTTTT 57.006 26.923 0.00 0.00 44.20 2.43
2813 5059 5.703592 GTCCCATGTTAGTGTTACATCAACA 59.296 40.000 14.09 14.09 44.97 3.33
2814 5060 5.938125 AGTCCCATGTTAGTGTTACATCAAC 59.062 40.000 5.46 5.46 34.11 3.18
2815 5061 5.937540 CAGTCCCATGTTAGTGTTACATCAA 59.062 40.000 0.00 0.00 34.11 2.57
2816 5062 5.487433 CAGTCCCATGTTAGTGTTACATCA 58.513 41.667 0.00 0.00 34.11 3.07
2817 5063 4.332819 GCAGTCCCATGTTAGTGTTACATC 59.667 45.833 0.00 0.00 34.11 3.06
2818 5064 4.261801 GCAGTCCCATGTTAGTGTTACAT 58.738 43.478 0.00 0.00 36.70 2.29
2819 5065 3.558321 GGCAGTCCCATGTTAGTGTTACA 60.558 47.826 0.00 0.00 0.00 2.41
2820 5066 3.007635 GGCAGTCCCATGTTAGTGTTAC 58.992 50.000 0.00 0.00 0.00 2.50
2821 5067 3.343941 GGCAGTCCCATGTTAGTGTTA 57.656 47.619 0.00 0.00 0.00 2.41
2822 5068 2.200373 GGCAGTCCCATGTTAGTGTT 57.800 50.000 0.00 0.00 0.00 3.32
2823 5069 3.957288 GGCAGTCCCATGTTAGTGT 57.043 52.632 0.00 0.00 0.00 3.55
2834 5080 0.957888 GAGAGCTTTGTGGGCAGTCC 60.958 60.000 0.00 0.00 0.00 3.85
2835 5081 0.957888 GGAGAGCTTTGTGGGCAGTC 60.958 60.000 0.00 0.00 0.00 3.51
2836 5082 1.073897 GGAGAGCTTTGTGGGCAGT 59.926 57.895 0.00 0.00 0.00 4.40
2837 5083 0.251077 AAGGAGAGCTTTGTGGGCAG 60.251 55.000 0.00 0.00 0.00 4.85
2838 5084 0.250901 GAAGGAGAGCTTTGTGGGCA 60.251 55.000 0.00 0.00 0.00 5.36
2839 5085 1.301677 CGAAGGAGAGCTTTGTGGGC 61.302 60.000 0.00 0.00 0.00 5.36
2840 5086 0.035458 ACGAAGGAGAGCTTTGTGGG 59.965 55.000 0.00 0.00 0.00 4.61
2841 5087 1.801178 GAACGAAGGAGAGCTTTGTGG 59.199 52.381 0.00 0.00 0.00 4.17
2842 5088 2.760374 AGAACGAAGGAGAGCTTTGTG 58.240 47.619 0.00 0.00 0.00 3.33
2843 5089 3.134458 CAAGAACGAAGGAGAGCTTTGT 58.866 45.455 0.00 0.00 0.00 2.83
2844 5090 2.481952 CCAAGAACGAAGGAGAGCTTTG 59.518 50.000 0.00 0.00 0.00 2.77
2845 5091 2.772287 CCAAGAACGAAGGAGAGCTTT 58.228 47.619 0.00 0.00 0.00 3.51
2846 5092 1.609320 GCCAAGAACGAAGGAGAGCTT 60.609 52.381 0.00 0.00 0.00 3.74
2847 5093 0.036858 GCCAAGAACGAAGGAGAGCT 60.037 55.000 0.00 0.00 0.00 4.09
2848 5094 0.036858 AGCCAAGAACGAAGGAGAGC 60.037 55.000 0.00 0.00 0.00 4.09
2849 5095 2.342179 GAAGCCAAGAACGAAGGAGAG 58.658 52.381 0.00 0.00 0.00 3.20
2850 5096 1.002087 GGAAGCCAAGAACGAAGGAGA 59.998 52.381 0.00 0.00 0.00 3.71
2851 5097 1.002544 AGGAAGCCAAGAACGAAGGAG 59.997 52.381 0.00 0.00 0.00 3.69
2852 5098 1.056660 AGGAAGCCAAGAACGAAGGA 58.943 50.000 0.00 0.00 0.00 3.36
2853 5099 1.807142 GAAGGAAGCCAAGAACGAAGG 59.193 52.381 0.00 0.00 0.00 3.46
2854 5100 2.739379 GAGAAGGAAGCCAAGAACGAAG 59.261 50.000 0.00 0.00 0.00 3.79
2855 5101 2.550208 GGAGAAGGAAGCCAAGAACGAA 60.550 50.000 0.00 0.00 0.00 3.85
2856 5102 1.002087 GGAGAAGGAAGCCAAGAACGA 59.998 52.381 0.00 0.00 0.00 3.85
2857 5103 1.002544 AGGAGAAGGAAGCCAAGAACG 59.997 52.381 0.00 0.00 0.00 3.95
2858 5104 2.304470 AGAGGAGAAGGAAGCCAAGAAC 59.696 50.000 0.00 0.00 0.00 3.01
2859 5105 2.304180 CAGAGGAGAAGGAAGCCAAGAA 59.696 50.000 0.00 0.00 0.00 2.52
2860 5106 1.905215 CAGAGGAGAAGGAAGCCAAGA 59.095 52.381 0.00 0.00 0.00 3.02
2861 5107 1.678425 GCAGAGGAGAAGGAAGCCAAG 60.678 57.143 0.00 0.00 0.00 3.61
2862 5108 0.326264 GCAGAGGAGAAGGAAGCCAA 59.674 55.000 0.00 0.00 0.00 4.52
2863 5109 0.837691 TGCAGAGGAGAAGGAAGCCA 60.838 55.000 0.00 0.00 0.00 4.75
2864 5110 0.326264 TTGCAGAGGAGAAGGAAGCC 59.674 55.000 0.00 0.00 0.00 4.35
2865 5111 1.003003 ACTTGCAGAGGAGAAGGAAGC 59.997 52.381 0.00 0.00 34.55 3.86
2866 5112 3.415457 AACTTGCAGAGGAGAAGGAAG 57.585 47.619 0.00 0.00 36.85 3.46
2867 5113 3.864789 AAACTTGCAGAGGAGAAGGAA 57.135 42.857 0.00 0.00 0.00 3.36
2868 5114 3.392616 AGAAAACTTGCAGAGGAGAAGGA 59.607 43.478 0.00 0.00 0.00 3.36
2869 5115 3.749226 AGAAAACTTGCAGAGGAGAAGG 58.251 45.455 0.00 0.00 0.00 3.46
2870 5116 4.818546 TGAAGAAAACTTGCAGAGGAGAAG 59.181 41.667 0.00 0.00 0.00 2.85
2871 5117 4.576463 GTGAAGAAAACTTGCAGAGGAGAA 59.424 41.667 0.00 0.00 0.00 2.87
2872 5118 4.130118 GTGAAGAAAACTTGCAGAGGAGA 58.870 43.478 0.00 0.00 0.00 3.71
2873 5119 4.133078 AGTGAAGAAAACTTGCAGAGGAG 58.867 43.478 0.00 0.00 0.00 3.69
2874 5120 4.130118 GAGTGAAGAAAACTTGCAGAGGA 58.870 43.478 0.00 0.00 0.00 3.71
2875 5121 3.059325 CGAGTGAAGAAAACTTGCAGAGG 60.059 47.826 0.00 0.00 0.00 3.69
2876 5122 4.125912 CGAGTGAAGAAAACTTGCAGAG 57.874 45.455 0.00 0.00 0.00 3.35
2881 5127 4.034510 AGTTGAGCGAGTGAAGAAAACTTG 59.965 41.667 0.00 0.00 32.94 3.16
2882 5128 4.034510 CAGTTGAGCGAGTGAAGAAAACTT 59.965 41.667 0.00 0.00 0.00 2.66
2883 5129 3.557595 CAGTTGAGCGAGTGAAGAAAACT 59.442 43.478 0.00 0.00 0.00 2.66
2884 5130 3.846383 GCAGTTGAGCGAGTGAAGAAAAC 60.846 47.826 0.00 0.00 0.00 2.43
2885 5131 2.287915 GCAGTTGAGCGAGTGAAGAAAA 59.712 45.455 0.00 0.00 0.00 2.29
2886 5132 1.867233 GCAGTTGAGCGAGTGAAGAAA 59.133 47.619 0.00 0.00 0.00 2.52
2887 5133 1.069204 AGCAGTTGAGCGAGTGAAGAA 59.931 47.619 0.00 0.00 40.15 2.52
2888 5134 0.676184 AGCAGTTGAGCGAGTGAAGA 59.324 50.000 0.00 0.00 40.15 2.87
2889 5135 2.354109 TAGCAGTTGAGCGAGTGAAG 57.646 50.000 0.00 0.00 40.15 3.02
2890 5136 2.035961 AGTTAGCAGTTGAGCGAGTGAA 59.964 45.455 0.00 0.00 40.15 3.18
2891 5137 1.613925 AGTTAGCAGTTGAGCGAGTGA 59.386 47.619 0.00 0.00 40.15 3.41
2892 5138 2.071688 AGTTAGCAGTTGAGCGAGTG 57.928 50.000 0.00 0.00 40.15 3.51
2893 5139 2.408050 CAAGTTAGCAGTTGAGCGAGT 58.592 47.619 0.00 0.00 40.15 4.18
2894 5140 1.728971 CCAAGTTAGCAGTTGAGCGAG 59.271 52.381 0.00 0.00 40.15 5.03
2895 5141 1.343142 TCCAAGTTAGCAGTTGAGCGA 59.657 47.619 0.00 0.00 40.15 4.93
2896 5142 1.795768 TCCAAGTTAGCAGTTGAGCG 58.204 50.000 0.00 0.00 40.15 5.03
2897 5143 4.568152 TTTTCCAAGTTAGCAGTTGAGC 57.432 40.909 0.00 0.00 35.56 4.26
2964 5210 8.344831 GCAAAAATTTTAAAACTCCTTGAGCAT 58.655 29.630 3.34 0.00 32.04 3.79
2965 5211 7.335422 TGCAAAAATTTTAAAACTCCTTGAGCA 59.665 29.630 3.34 4.27 32.04 4.26
2966 5212 7.693020 TGCAAAAATTTTAAAACTCCTTGAGC 58.307 30.769 3.34 1.85 32.04 4.26
3093 5339 8.830580 CGGATATTTTCTGAGTGTGTGAATATT 58.169 33.333 0.00 0.00 31.81 1.28
3094 5340 7.987458 ACGGATATTTTCTGAGTGTGTGAATAT 59.013 33.333 0.00 0.00 34.56 1.28
3095 5341 7.277760 CACGGATATTTTCTGAGTGTGTGAATA 59.722 37.037 0.00 0.00 34.56 1.75
3096 5342 6.092670 CACGGATATTTTCTGAGTGTGTGAAT 59.907 38.462 0.00 0.00 34.56 2.57
3097 5343 5.408299 CACGGATATTTTCTGAGTGTGTGAA 59.592 40.000 0.00 0.00 34.56 3.18
3098 5344 4.929211 CACGGATATTTTCTGAGTGTGTGA 59.071 41.667 0.00 0.00 34.56 3.58
3099 5345 4.929211 TCACGGATATTTTCTGAGTGTGTG 59.071 41.667 0.00 0.00 34.56 3.82
3100 5346 5.147330 TCACGGATATTTTCTGAGTGTGT 57.853 39.130 0.00 0.00 34.56 3.72
3101 5347 5.639506 AGTTCACGGATATTTTCTGAGTGTG 59.360 40.000 0.00 0.00 34.56 3.82
3102 5348 5.794894 AGTTCACGGATATTTTCTGAGTGT 58.205 37.500 0.00 0.00 34.56 3.55
3103 5349 6.727824 AAGTTCACGGATATTTTCTGAGTG 57.272 37.500 0.00 0.00 34.56 3.51
3164 5410 9.208022 TGTGAACATAAAAACACAAACATTTCA 57.792 25.926 0.00 0.00 39.70 2.69
3178 5424 9.907576 CGCTTGTTAAAAATTGTGAACATAAAA 57.092 25.926 0.00 0.00 32.19 1.52
3179 5425 9.088512 ACGCTTGTTAAAAATTGTGAACATAAA 57.911 25.926 0.00 0.00 32.19 1.40
3180 5426 8.635877 ACGCTTGTTAAAAATTGTGAACATAA 57.364 26.923 0.00 0.00 32.19 1.90
3181 5427 8.635877 AACGCTTGTTAAAAATTGTGAACATA 57.364 26.923 0.00 0.00 32.95 2.29
3182 5428 7.276658 TGAACGCTTGTTAAAAATTGTGAACAT 59.723 29.630 0.00 0.00 35.50 2.71
3183 5429 6.586463 TGAACGCTTGTTAAAAATTGTGAACA 59.414 30.769 0.00 0.00 35.50 3.18
3184 5430 6.983910 TGAACGCTTGTTAAAAATTGTGAAC 58.016 32.000 0.00 0.00 35.50 3.18
3185 5431 7.489435 TCATGAACGCTTGTTAAAAATTGTGAA 59.511 29.630 0.00 0.00 35.50 3.18
3186 5432 6.975197 TCATGAACGCTTGTTAAAAATTGTGA 59.025 30.769 0.00 0.00 35.50 3.58
3187 5433 7.159437 TCATGAACGCTTGTTAAAAATTGTG 57.841 32.000 0.00 0.00 35.50 3.33
3188 5434 7.763172 TTCATGAACGCTTGTTAAAAATTGT 57.237 28.000 3.38 0.00 35.50 2.71
3197 5443 9.853555 TCATATTTTAATTCATGAACGCTTGTT 57.146 25.926 11.07 2.55 38.91 2.83
3198 5444 9.853555 TTCATATTTTAATTCATGAACGCTTGT 57.146 25.926 11.07 0.00 33.60 3.16
3230 5476 9.959775 CGATGTGTAGTTTTATTTCTCTTTCTC 57.040 33.333 0.00 0.00 0.00 2.87
3238 5484 5.503376 CGTGTGCGATGTGTAGTTTTATTTC 59.497 40.000 0.00 0.00 41.33 2.17
3244 5490 0.511221 GCGTGTGCGATGTGTAGTTT 59.489 50.000 0.00 0.00 41.33 2.66
3245 5491 2.150424 GCGTGTGCGATGTGTAGTT 58.850 52.632 0.00 0.00 41.33 2.24
3246 5492 3.856508 GCGTGTGCGATGTGTAGT 58.143 55.556 0.00 0.00 41.33 2.73
3257 5503 1.014352 GCCCCTTATGTAAGCGTGTG 58.986 55.000 0.00 0.00 32.02 3.82
3258 5504 0.107361 GGCCCCTTATGTAAGCGTGT 60.107 55.000 0.00 0.00 32.02 4.49
3259 5505 0.818040 GGGCCCCTTATGTAAGCGTG 60.818 60.000 12.23 0.00 32.02 5.34
3260 5506 1.530283 GGGCCCCTTATGTAAGCGT 59.470 57.895 12.23 0.00 32.02 5.07
3261 5507 1.597027 CGGGCCCCTTATGTAAGCG 60.597 63.158 18.66 0.00 32.02 4.68
3262 5508 1.897137 GCGGGCCCCTTATGTAAGC 60.897 63.158 18.66 6.46 32.02 3.09
3263 5509 0.106918 TTGCGGGCCCCTTATGTAAG 60.107 55.000 18.66 0.00 0.00 2.34
3265 5511 0.179004 CATTGCGGGCCCCTTATGTA 60.179 55.000 18.66 0.00 0.00 2.29
3266 5512 1.455587 CATTGCGGGCCCCTTATGT 60.456 57.895 18.66 0.00 0.00 2.29
3267 5513 1.152777 TCATTGCGGGCCCCTTATG 60.153 57.895 18.66 16.56 0.00 1.90
3268 5514 1.152756 GTCATTGCGGGCCCCTTAT 60.153 57.895 18.66 3.44 0.00 1.73
3269 5515 2.265467 GAGTCATTGCGGGCCCCTTA 62.265 60.000 18.66 0.54 0.00 2.69
3270 5516 3.645268 GAGTCATTGCGGGCCCCTT 62.645 63.158 18.66 0.00 0.00 3.95
3273 5519 4.424711 TGGAGTCATTGCGGGCCC 62.425 66.667 13.57 13.57 0.00 5.80
3274 5520 2.252072 TAGTGGAGTCATTGCGGGCC 62.252 60.000 0.00 0.00 0.00 5.80
3275 5521 0.179045 ATAGTGGAGTCATTGCGGGC 60.179 55.000 0.00 0.00 0.00 6.13
3276 5522 2.628178 TCTATAGTGGAGTCATTGCGGG 59.372 50.000 0.00 0.00 0.00 6.13
3277 5523 4.527509 ATCTATAGTGGAGTCATTGCGG 57.472 45.455 0.00 0.00 0.00 5.69
3278 5524 6.754209 GGAATATCTATAGTGGAGTCATTGCG 59.246 42.308 0.00 0.00 0.00 4.85
3279 5525 7.846066 AGGAATATCTATAGTGGAGTCATTGC 58.154 38.462 0.00 0.00 0.00 3.56
3280 5526 9.650539 CAAGGAATATCTATAGTGGAGTCATTG 57.349 37.037 0.00 5.87 0.00 2.82
3281 5527 9.386122 ACAAGGAATATCTATAGTGGAGTCATT 57.614 33.333 0.00 0.00 0.00 2.57
3282 5528 8.964533 ACAAGGAATATCTATAGTGGAGTCAT 57.035 34.615 0.00 0.00 0.00 3.06
3347 5593 2.969950 CCTTATGGATAGACGGTCCCAA 59.030 50.000 4.14 0.00 34.76 4.12
3368 5614 9.423061 ACAAGATGCAAATTTATTTTCAGGTAC 57.577 29.630 0.00 0.00 0.00 3.34
3404 5650 0.876342 GTTCATCCCTGATCCGACGC 60.876 60.000 0.00 0.00 0.00 5.19
3406 5652 0.249489 CCGTTCATCCCTGATCCGAC 60.249 60.000 0.00 0.00 31.40 4.79
3414 5661 0.692419 AGATCTGGCCGTTCATCCCT 60.692 55.000 0.00 0.00 0.00 4.20
3429 5676 3.133901 GGTTGGAGGAGAAGAAGGAGATC 59.866 52.174 0.00 0.00 0.00 2.75
3439 5686 1.829222 GGACATACGGTTGGAGGAGAA 59.171 52.381 0.00 0.00 0.00 2.87
3440 5687 1.272816 TGGACATACGGTTGGAGGAGA 60.273 52.381 0.00 0.00 0.00 3.71
3466 5713 0.620556 AGGGTGCACGATTGAAGGAT 59.379 50.000 11.45 0.00 0.00 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.