Multiple sequence alignment - TraesCS2B01G182900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G182900 chr2B 100.000 2319 0 0 1 2319 157737070 157734752 0.000000e+00 4283.0
1 TraesCS2B01G182900 chr2B 100.000 572 0 0 2561 3132 157734510 157733939 0.000000e+00 1057.0
2 TraesCS2B01G182900 chr2B 91.331 323 16 1 303 625 229949087 229948777 6.210000e-117 431.0
3 TraesCS2B01G182900 chr2B 92.174 115 5 3 522 633 243075748 243075861 3.230000e-35 159.0
4 TraesCS2B01G182900 chr2B 95.349 43 2 0 3090 3132 532133004 532132962 5.600000e-08 69.4
5 TraesCS2B01G182900 chr2B 95.349 43 1 1 3041 3083 590683772 590683731 2.020000e-07 67.6
6 TraesCS2B01G182900 chr2B 93.023 43 3 0 3090 3132 124637993 124638035 2.610000e-06 63.9
7 TraesCS2B01G182900 chr2D 92.827 1673 67 24 618 2262 107695162 107693515 0.000000e+00 2375.0
8 TraesCS2B01G182900 chr2D 85.714 987 113 16 949 1917 107576094 107575118 0.000000e+00 1016.0
9 TraesCS2B01G182900 chr2D 89.765 469 32 3 2592 3044 107693495 107693027 1.250000e-163 586.0
10 TraesCS2B01G182900 chr2D 95.695 302 12 1 1 302 107695445 107695145 4.700000e-133 484.0
11 TraesCS2B01G182900 chr2D 100.000 32 0 0 3101 3132 335739117 335739086 3.370000e-05 60.2
12 TraesCS2B01G182900 chr2A 94.251 1322 46 12 949 2251 104028383 104027073 0.000000e+00 1993.0
13 TraesCS2B01G182900 chr2A 84.615 728 87 14 1034 1738 103985626 103984901 0.000000e+00 701.0
14 TraesCS2B01G182900 chr2A 94.576 295 13 2 618 911 104028765 104028473 1.320000e-123 453.0
15 TraesCS2B01G182900 chr2A 91.234 308 23 3 2741 3044 104024576 104024269 1.740000e-112 416.0
16 TraesCS2B01G182900 chr2A 88.235 306 20 10 1 302 104029041 104028748 4.970000e-93 351.0
17 TraesCS2B01G182900 chr2A 91.716 169 13 1 2570 2737 104026703 104026535 1.880000e-57 233.0
18 TraesCS2B01G182900 chr2A 89.706 68 6 1 1850 1917 103912693 103912627 5.570000e-13 86.1
19 TraesCS2B01G182900 chr2A 86.420 81 3 4 3052 3132 606670170 606670098 7.200000e-12 82.4
20 TraesCS2B01G182900 chr2A 84.932 73 4 5 3052 3124 281575281 281575346 2.020000e-07 67.6
21 TraesCS2B01G182900 chr7A 91.975 324 14 3 297 619 711584198 711583886 7.970000e-121 444.0
22 TraesCS2B01G182900 chr7A 92.138 318 12 2 303 619 4785068 4784763 1.330000e-118 436.0
23 TraesCS2B01G182900 chr7A 90.966 321 16 2 302 622 8660472 8660165 1.340000e-113 420.0
24 TraesCS2B01G182900 chr7A 91.195 318 15 2 303 619 709593942 709594247 1.340000e-113 420.0
25 TraesCS2B01G182900 chr7A 82.803 314 42 4 303 608 644718685 644718376 1.430000e-68 270.0
26 TraesCS2B01G182900 chr7A 82.716 81 4 4 3052 3132 117158986 117158916 2.610000e-06 63.9
27 TraesCS2B01G182900 chr4B 92.453 318 11 2 303 619 40215532 40215227 2.870000e-120 442.0
28 TraesCS2B01G182900 chr4B 90.030 331 18 8 303 632 382202671 382202355 6.250000e-112 414.0
29 TraesCS2B01G182900 chr4B 100.000 32 0 0 3098 3129 169277997 169277966 3.370000e-05 60.2
30 TraesCS2B01G182900 chr1B 91.824 318 13 3 303 619 675769120 675768815 6.210000e-117 431.0
31 TraesCS2B01G182900 chr1B 97.297 37 1 0 3096 3132 79139362 79139326 2.610000e-06 63.9
32 TraesCS2B01G182900 chr1B 79.798 99 4 4 3038 3132 344978290 344978376 1.210000e-04 58.4
33 TraesCS2B01G182900 chrUn 90.909 319 17 4 300 618 200950206 200950512 4.830000e-113 418.0
34 TraesCS2B01G182900 chrUn 83.951 81 3 3 3052 3132 65659931 65659861 5.600000e-08 69.4
35 TraesCS2B01G182900 chrUn 83.951 81 3 3 3052 3132 102806558 102806628 5.600000e-08 69.4
36 TraesCS2B01G182900 chrUn 82.500 80 4 3 3053 3132 348350973 348350904 9.380000e-06 62.1
37 TraesCS2B01G182900 chr5A 90.221 317 19 2 303 619 45250476 45250172 1.350000e-108 403.0
38 TraesCS2B01G182900 chr5A 82.716 81 4 3 3052 3132 136922293 136922363 2.610000e-06 63.9
39 TraesCS2B01G182900 chr4D 81.416 452 49 21 2607 3033 500539561 500540002 1.390000e-88 337.0
40 TraesCS2B01G182900 chr7D 86.184 304 33 7 302 605 154915834 154916128 1.400000e-83 320.0
41 TraesCS2B01G182900 chr7D 83.951 81 3 4 3052 3132 152237177 152237107 5.600000e-08 69.4
42 TraesCS2B01G182900 chr7D 82.716 81 4 3 3052 3132 496250189 496250259 2.610000e-06 63.9
43 TraesCS2B01G182900 chr7D 97.143 35 1 0 3049 3083 467013868 467013902 3.370000e-05 60.2
44 TraesCS2B01G182900 chr7D 96.970 33 1 0 3098 3130 378582275 378582243 4.360000e-04 56.5
45 TraesCS2B01G182900 chr5D 84.740 308 39 5 310 616 516489504 516489204 5.080000e-78 302.0
46 TraesCS2B01G182900 chr5D 83.951 81 3 1 3052 3132 512273859 512273929 5.600000e-08 69.4
47 TraesCS2B01G182900 chr5D 100.000 33 0 0 3100 3132 52122362 52122330 9.380000e-06 62.1
48 TraesCS2B01G182900 chr1A 95.960 99 4 0 522 620 575180215 575180117 8.990000e-36 161.0
49 TraesCS2B01G182900 chr1A 100.000 37 0 0 3096 3132 308295704 308295668 5.600000e-08 69.4
50 TraesCS2B01G182900 chr1A 83.333 84 4 4 3049 3132 371443684 371443757 5.600000e-08 69.4
51 TraesCS2B01G182900 chr1A 83.951 81 3 1 3052 3132 389151198 389151128 5.600000e-08 69.4
52 TraesCS2B01G182900 chr1A 100.000 32 0 0 3052 3083 374577423 374577454 3.370000e-05 60.2
53 TraesCS2B01G182900 chr1A 100.000 31 0 0 3102 3132 122201727 122201697 1.210000e-04 58.4
54 TraesCS2B01G182900 chr7B 95.050 101 5 0 519 619 700435216 700435316 3.230000e-35 159.0
55 TraesCS2B01G182900 chr7B 95.349 43 2 0 3090 3132 522624153 522624195 5.600000e-08 69.4
56 TraesCS2B01G182900 chr3D 80.488 123 15 8 2894 3011 183893683 183893565 5.570000e-13 86.1
57 TraesCS2B01G182900 chr4A 85.526 76 1 3 3057 3132 352868623 352868558 1.560000e-08 71.3
58 TraesCS2B01G182900 chr4A 84.615 78 2 4 3052 3129 58597850 58597783 5.600000e-08 69.4
59 TraesCS2B01G182900 chr6D 83.951 81 3 5 3052 3132 209412459 209412529 5.600000e-08 69.4
60 TraesCS2B01G182900 chr6D 83.951 81 3 4 3052 3132 385575765 385575835 5.600000e-08 69.4
61 TraesCS2B01G182900 chr6D 82.716 81 4 4 3052 3132 32287041 32286971 2.610000e-06 63.9
62 TraesCS2B01G182900 chr6D 82.716 81 4 5 3052 3132 64151316 64151246 2.610000e-06 63.9
63 TraesCS2B01G182900 chr6D 82.716 81 3 5 3052 3132 258512481 258512412 9.380000e-06 62.1
64 TraesCS2B01G182900 chr6D 100.000 32 0 0 3052 3083 59237966 59237997 3.370000e-05 60.2
65 TraesCS2B01G182900 chr6D 100.000 32 0 0 3052 3083 144943929 144943898 3.370000e-05 60.2
66 TraesCS2B01G182900 chr6D 100.000 32 0 0 3052 3083 171284999 171284968 3.370000e-05 60.2
67 TraesCS2B01G182900 chr1D 83.951 81 3 3 3052 3132 128685813 128685883 5.600000e-08 69.4
68 TraesCS2B01G182900 chr3A 83.750 80 3 5 3053 3132 659117930 659117999 2.020000e-07 67.6
69 TraesCS2B01G182900 chr3A 82.716 81 5 4 3052 3132 425762436 425762507 2.610000e-06 63.9
70 TraesCS2B01G182900 chr6A 93.333 45 1 2 3089 3132 403911257 403911300 7.250000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G182900 chr2B 157733939 157737070 3131 True 2670.000000 4283 100.000000 1 3132 2 chr2B.!!$R4 3131
1 TraesCS2B01G182900 chr2D 107693027 107695445 2418 True 1148.333333 2375 92.762333 1 3044 3 chr2D.!!$R3 3043
2 TraesCS2B01G182900 chr2D 107575118 107576094 976 True 1016.000000 1016 85.714000 949 1917 1 chr2D.!!$R1 968
3 TraesCS2B01G182900 chr2A 103984901 103985626 725 True 701.000000 701 84.615000 1034 1738 1 chr2A.!!$R2 704
4 TraesCS2B01G182900 chr2A 104024269 104029041 4772 True 689.200000 1993 92.002400 1 3044 5 chr2A.!!$R4 3043

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
441 448 0.037232 CAGTGGGAGGAGACGTTTCC 60.037 60.0 17.16 17.16 37.52 3.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2261 2385 0.179094 AACGAAGAAGACACGCACCA 60.179 50.0 0.0 0.0 0.0 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
201 203 9.559958 CTAATAATGTCAGTTGCACCTAAAAAG 57.440 33.333 0.00 0.00 0.00 2.27
284 291 2.577059 GACGGAAGCGACCCATCA 59.423 61.111 0.00 0.00 0.00 3.07
285 292 1.079405 GACGGAAGCGACCCATCAA 60.079 57.895 0.00 0.00 0.00 2.57
286 293 1.359459 GACGGAAGCGACCCATCAAC 61.359 60.000 0.00 0.00 0.00 3.18
287 294 2.106683 CGGAAGCGACCCATCAACC 61.107 63.158 0.00 0.00 0.00 3.77
288 295 1.002624 GGAAGCGACCCATCAACCA 60.003 57.895 0.00 0.00 0.00 3.67
289 296 1.026718 GGAAGCGACCCATCAACCAG 61.027 60.000 0.00 0.00 0.00 4.00
290 297 0.321653 GAAGCGACCCATCAACCAGT 60.322 55.000 0.00 0.00 0.00 4.00
291 298 0.981183 AAGCGACCCATCAACCAGTA 59.019 50.000 0.00 0.00 0.00 2.74
292 299 0.249398 AGCGACCCATCAACCAGTAC 59.751 55.000 0.00 0.00 0.00 2.73
293 300 1.082117 GCGACCCATCAACCAGTACG 61.082 60.000 0.00 0.00 0.00 3.67
294 301 0.528924 CGACCCATCAACCAGTACGA 59.471 55.000 0.00 0.00 0.00 3.43
295 302 1.136305 CGACCCATCAACCAGTACGAT 59.864 52.381 0.00 0.00 0.00 3.73
296 303 2.550978 GACCCATCAACCAGTACGATG 58.449 52.381 0.00 0.00 36.99 3.84
297 304 2.167693 GACCCATCAACCAGTACGATGA 59.832 50.000 8.70 3.15 39.09 2.92
298 305 2.569853 ACCCATCAACCAGTACGATGAA 59.430 45.455 8.70 0.00 39.09 2.57
299 306 3.008594 ACCCATCAACCAGTACGATGAAA 59.991 43.478 8.70 0.00 39.09 2.69
300 307 4.199310 CCCATCAACCAGTACGATGAAAT 58.801 43.478 8.70 0.00 39.09 2.17
301 308 4.640201 CCCATCAACCAGTACGATGAAATT 59.360 41.667 8.70 0.00 39.09 1.82
302 309 5.449041 CCCATCAACCAGTACGATGAAATTG 60.449 44.000 8.70 0.00 39.09 2.32
303 310 4.678509 TCAACCAGTACGATGAAATTGC 57.321 40.909 0.00 0.00 0.00 3.56
304 311 3.124466 TCAACCAGTACGATGAAATTGCG 59.876 43.478 0.00 0.00 0.00 4.85
305 312 2.967362 ACCAGTACGATGAAATTGCGA 58.033 42.857 0.00 0.00 0.00 5.10
306 313 3.331150 ACCAGTACGATGAAATTGCGAA 58.669 40.909 0.00 0.00 0.00 4.70
307 314 3.938963 ACCAGTACGATGAAATTGCGAAT 59.061 39.130 0.00 0.00 0.00 3.34
308 315 4.034048 ACCAGTACGATGAAATTGCGAATC 59.966 41.667 0.00 0.00 0.00 2.52
309 316 4.033932 CCAGTACGATGAAATTGCGAATCA 59.966 41.667 0.00 0.00 0.00 2.57
310 317 5.447144 CCAGTACGATGAAATTGCGAATCAA 60.447 40.000 0.00 0.00 39.32 2.57
311 318 5.449113 CAGTACGATGAAATTGCGAATCAAC 59.551 40.000 0.00 0.00 37.53 3.18
312 319 3.416277 ACGATGAAATTGCGAATCAACG 58.584 40.909 16.27 16.27 42.65 4.10
313 320 3.120338 ACGATGAAATTGCGAATCAACGT 60.120 39.130 17.23 17.23 44.26 3.99
314 321 3.235852 CGATGAAATTGCGAATCAACGTG 59.764 43.478 12.02 0.00 37.53 4.49
315 322 3.617540 TGAAATTGCGAATCAACGTGT 57.382 38.095 0.00 0.00 37.53 4.49
316 323 3.295785 TGAAATTGCGAATCAACGTGTG 58.704 40.909 0.00 0.00 37.53 3.82
317 324 2.330231 AATTGCGAATCAACGTGTGG 57.670 45.000 0.00 0.00 37.53 4.17
318 325 1.234821 ATTGCGAATCAACGTGTGGT 58.765 45.000 0.00 0.00 37.53 4.16
319 326 1.018148 TTGCGAATCAACGTGTGGTT 58.982 45.000 0.00 0.00 40.22 3.67
327 334 3.562397 AACGTGTGGTTGAGTTGGT 57.438 47.368 0.00 0.00 37.50 3.67
328 335 1.828979 AACGTGTGGTTGAGTTGGTT 58.171 45.000 0.00 0.00 37.50 3.67
329 336 2.695127 ACGTGTGGTTGAGTTGGTTA 57.305 45.000 0.00 0.00 0.00 2.85
330 337 2.557317 ACGTGTGGTTGAGTTGGTTAG 58.443 47.619 0.00 0.00 0.00 2.34
331 338 1.871039 CGTGTGGTTGAGTTGGTTAGG 59.129 52.381 0.00 0.00 0.00 2.69
332 339 2.743838 CGTGTGGTTGAGTTGGTTAGGT 60.744 50.000 0.00 0.00 0.00 3.08
333 340 2.616842 GTGTGGTTGAGTTGGTTAGGTG 59.383 50.000 0.00 0.00 0.00 4.00
334 341 2.227194 GTGGTTGAGTTGGTTAGGTGG 58.773 52.381 0.00 0.00 0.00 4.61
335 342 2.128535 TGGTTGAGTTGGTTAGGTGGA 58.871 47.619 0.00 0.00 0.00 4.02
336 343 2.158726 TGGTTGAGTTGGTTAGGTGGAC 60.159 50.000 0.00 0.00 0.00 4.02
337 344 2.158726 GGTTGAGTTGGTTAGGTGGACA 60.159 50.000 0.00 0.00 0.00 4.02
338 345 3.139077 GTTGAGTTGGTTAGGTGGACAG 58.861 50.000 0.00 0.00 0.00 3.51
339 346 2.404559 TGAGTTGGTTAGGTGGACAGT 58.595 47.619 0.00 0.00 0.00 3.55
340 347 2.104111 TGAGTTGGTTAGGTGGACAGTG 59.896 50.000 0.00 0.00 0.00 3.66
341 348 1.420138 AGTTGGTTAGGTGGACAGTGG 59.580 52.381 0.00 0.00 0.00 4.00
342 349 1.142262 GTTGGTTAGGTGGACAGTGGT 59.858 52.381 0.00 0.00 0.00 4.16
343 350 2.369532 GTTGGTTAGGTGGACAGTGGTA 59.630 50.000 0.00 0.00 0.00 3.25
344 351 2.910544 TGGTTAGGTGGACAGTGGTAT 58.089 47.619 0.00 0.00 0.00 2.73
345 352 2.835764 TGGTTAGGTGGACAGTGGTATC 59.164 50.000 0.00 0.00 0.00 2.24
346 353 2.169978 GGTTAGGTGGACAGTGGTATCC 59.830 54.545 0.00 0.00 35.37 2.59
347 354 2.169978 GTTAGGTGGACAGTGGTATCCC 59.830 54.545 0.00 0.00 33.69 3.85
348 355 0.620700 AGGTGGACAGTGGTATCCCC 60.621 60.000 0.00 0.00 33.69 4.81
349 356 0.912487 GGTGGACAGTGGTATCCCCA 60.912 60.000 0.00 0.00 42.51 4.96
357 364 3.444955 TGGTATCCCCAACCCATCA 57.555 52.632 0.00 0.00 41.50 3.07
358 365 1.221635 TGGTATCCCCAACCCATCAG 58.778 55.000 0.00 0.00 41.50 2.90
359 366 0.478507 GGTATCCCCAACCCATCAGG 59.521 60.000 0.00 0.00 43.78 3.86
376 383 2.683211 AGGGTTCAAATCCTGTTGCT 57.317 45.000 0.00 0.00 38.36 3.91
377 384 2.519013 AGGGTTCAAATCCTGTTGCTC 58.481 47.619 0.00 0.00 38.36 4.26
378 385 1.200020 GGGTTCAAATCCTGTTGCTCG 59.800 52.381 0.00 0.00 0.00 5.03
379 386 1.401539 GGTTCAAATCCTGTTGCTCGC 60.402 52.381 0.00 0.00 0.00 5.03
380 387 1.266718 GTTCAAATCCTGTTGCTCGCA 59.733 47.619 0.00 0.00 0.00 5.10
381 388 1.825090 TCAAATCCTGTTGCTCGCAT 58.175 45.000 0.00 0.00 0.00 4.73
382 389 2.161855 TCAAATCCTGTTGCTCGCATT 58.838 42.857 0.00 0.00 0.00 3.56
383 390 3.342719 TCAAATCCTGTTGCTCGCATTA 58.657 40.909 0.00 0.00 0.00 1.90
384 391 3.947196 TCAAATCCTGTTGCTCGCATTAT 59.053 39.130 0.00 0.00 0.00 1.28
385 392 4.398988 TCAAATCCTGTTGCTCGCATTATT 59.601 37.500 0.00 0.00 0.00 1.40
386 393 4.558538 AATCCTGTTGCTCGCATTATTC 57.441 40.909 0.00 0.00 0.00 1.75
387 394 3.266510 TCCTGTTGCTCGCATTATTCT 57.733 42.857 0.00 0.00 0.00 2.40
388 395 3.609853 TCCTGTTGCTCGCATTATTCTT 58.390 40.909 0.00 0.00 0.00 2.52
389 396 3.374988 TCCTGTTGCTCGCATTATTCTTG 59.625 43.478 0.00 0.00 0.00 3.02
390 397 3.374988 CCTGTTGCTCGCATTATTCTTGA 59.625 43.478 0.00 0.00 0.00 3.02
391 398 4.142622 CCTGTTGCTCGCATTATTCTTGAA 60.143 41.667 0.00 0.00 0.00 2.69
392 399 5.449588 CCTGTTGCTCGCATTATTCTTGAAT 60.450 40.000 1.35 1.35 0.00 2.57
393 400 5.953183 TGTTGCTCGCATTATTCTTGAATT 58.047 33.333 0.95 0.00 0.00 2.17
394 401 6.389091 TGTTGCTCGCATTATTCTTGAATTT 58.611 32.000 0.95 0.00 0.00 1.82
395 402 7.534282 TGTTGCTCGCATTATTCTTGAATTTA 58.466 30.769 0.95 0.00 0.00 1.40
396 403 8.190122 TGTTGCTCGCATTATTCTTGAATTTAT 58.810 29.630 0.95 0.00 0.00 1.40
397 404 9.023967 GTTGCTCGCATTATTCTTGAATTTATT 57.976 29.630 0.95 0.00 0.00 1.40
398 405 9.585099 TTGCTCGCATTATTCTTGAATTTATTT 57.415 25.926 0.95 0.00 0.00 1.40
399 406 9.236691 TGCTCGCATTATTCTTGAATTTATTTC 57.763 29.630 0.95 0.00 34.72 2.17
400 407 9.236691 GCTCGCATTATTCTTGAATTTATTTCA 57.763 29.630 0.95 0.00 42.62 2.69
410 417 9.638239 TTCTTGAATTTATTTCAGAATTTCCGG 57.362 29.630 0.00 0.00 44.90 5.14
411 418 8.802267 TCTTGAATTTATTTCAGAATTTCCGGT 58.198 29.630 0.00 0.00 44.90 5.28
412 419 8.755696 TTGAATTTATTTCAGAATTTCCGGTG 57.244 30.769 0.00 0.00 44.90 4.94
413 420 8.116651 TGAATTTATTTCAGAATTTCCGGTGA 57.883 30.769 0.00 0.00 39.44 4.02
414 421 8.748412 TGAATTTATTTCAGAATTTCCGGTGAT 58.252 29.630 0.00 0.00 39.44 3.06
415 422 8.931385 AATTTATTTCAGAATTTCCGGTGATG 57.069 30.769 0.00 0.00 0.00 3.07
416 423 3.848272 TTTCAGAATTTCCGGTGATGC 57.152 42.857 0.00 0.00 0.00 3.91
417 424 1.368641 TCAGAATTTCCGGTGATGCG 58.631 50.000 0.00 0.00 0.00 4.73
418 425 0.248215 CAGAATTTCCGGTGATGCGC 60.248 55.000 0.00 0.00 0.00 6.09
419 426 0.392998 AGAATTTCCGGTGATGCGCT 60.393 50.000 9.73 0.00 0.00 5.92
420 427 0.451783 GAATTTCCGGTGATGCGCTT 59.548 50.000 9.73 0.55 0.00 4.68
421 428 0.887933 AATTTCCGGTGATGCGCTTT 59.112 45.000 9.73 0.00 0.00 3.51
422 429 0.451783 ATTTCCGGTGATGCGCTTTC 59.548 50.000 9.73 6.46 0.00 2.62
423 430 0.886938 TTTCCGGTGATGCGCTTTCA 60.887 50.000 9.73 9.39 0.00 2.69
424 431 1.298157 TTCCGGTGATGCGCTTTCAG 61.298 55.000 9.73 1.30 0.00 3.02
425 432 2.034879 CCGGTGATGCGCTTTCAGT 61.035 57.895 9.73 0.00 0.00 3.41
426 433 1.133253 CGGTGATGCGCTTTCAGTG 59.867 57.895 9.73 3.66 0.00 3.66
427 434 1.503542 GGTGATGCGCTTTCAGTGG 59.496 57.895 9.73 0.00 0.00 4.00
428 435 1.503542 GTGATGCGCTTTCAGTGGG 59.496 57.895 9.73 0.00 0.00 4.61
429 436 0.955428 GTGATGCGCTTTCAGTGGGA 60.955 55.000 9.73 0.00 0.00 4.37
430 437 0.674581 TGATGCGCTTTCAGTGGGAG 60.675 55.000 9.73 0.00 0.00 4.30
431 438 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
432 439 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
433 440 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
434 441 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
435 442 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
436 443 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
437 444 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
438 445 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
439 446 1.420430 TTCAGTGGGAGGAGACGTTT 58.580 50.000 0.00 0.00 0.00 3.60
440 447 0.966920 TCAGTGGGAGGAGACGTTTC 59.033 55.000 0.00 0.00 0.00 2.78
441 448 0.037232 CAGTGGGAGGAGACGTTTCC 60.037 60.000 17.16 17.16 37.52 3.13
442 449 1.080025 GTGGGAGGAGACGTTTCCG 60.080 63.158 18.59 0.00 42.29 4.30
462 469 4.253257 GACGACGAGGCGCCTAGG 62.253 72.222 35.29 28.55 33.86 3.02
465 472 4.208686 GACGAGGCGCCTAGGGTG 62.209 72.222 35.29 22.14 36.10 4.61
466 473 4.753662 ACGAGGCGCCTAGGGTGA 62.754 66.667 35.29 0.00 34.74 4.02
467 474 4.208686 CGAGGCGCCTAGGGTGAC 62.209 72.222 32.97 14.51 42.50 3.67
470 477 2.187163 GGCGCCTAGGGTGACTTC 59.813 66.667 22.15 0.00 38.38 3.01
471 478 2.202756 GCGCCTAGGGTGACTTCG 60.203 66.667 11.72 4.55 34.74 3.79
472 479 3.003113 GCGCCTAGGGTGACTTCGT 62.003 63.158 11.72 0.00 34.74 3.85
473 480 1.660560 GCGCCTAGGGTGACTTCGTA 61.661 60.000 11.72 0.00 34.74 3.43
474 481 0.813184 CGCCTAGGGTGACTTCGTAA 59.187 55.000 11.72 0.00 34.74 3.18
475 482 1.203052 CGCCTAGGGTGACTTCGTAAA 59.797 52.381 11.72 0.00 34.74 2.01
476 483 2.159142 CGCCTAGGGTGACTTCGTAAAT 60.159 50.000 11.72 0.00 34.74 1.40
477 484 3.455327 GCCTAGGGTGACTTCGTAAATC 58.545 50.000 11.72 0.00 0.00 2.17
478 485 3.132467 GCCTAGGGTGACTTCGTAAATCT 59.868 47.826 11.72 0.00 0.00 2.40
479 486 4.737055 GCCTAGGGTGACTTCGTAAATCTC 60.737 50.000 11.72 0.00 0.00 2.75
480 487 4.401519 CCTAGGGTGACTTCGTAAATCTCA 59.598 45.833 0.00 0.00 0.00 3.27
481 488 4.884668 AGGGTGACTTCGTAAATCTCAA 57.115 40.909 0.00 0.00 0.00 3.02
482 489 4.822026 AGGGTGACTTCGTAAATCTCAAG 58.178 43.478 0.00 0.00 0.00 3.02
483 490 4.527038 AGGGTGACTTCGTAAATCTCAAGA 59.473 41.667 0.00 0.00 0.00 3.02
484 491 5.187967 AGGGTGACTTCGTAAATCTCAAGAT 59.812 40.000 0.00 0.00 36.07 2.40
485 492 5.292101 GGGTGACTTCGTAAATCTCAAGATG 59.708 44.000 0.00 0.00 34.49 2.90
486 493 6.100004 GGTGACTTCGTAAATCTCAAGATGA 58.900 40.000 0.00 0.00 34.49 2.92
487 494 6.758886 GGTGACTTCGTAAATCTCAAGATGAT 59.241 38.462 0.00 0.00 34.49 2.45
488 495 7.921214 GGTGACTTCGTAAATCTCAAGATGATA 59.079 37.037 0.00 0.00 34.49 2.15
489 496 9.469807 GTGACTTCGTAAATCTCAAGATGATAT 57.530 33.333 0.00 0.00 34.49 1.63
490 497 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
491 498 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
492 499 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
493 500 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
494 501 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
495 502 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
496 503 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
497 504 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
498 505 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
499 506 2.104622 TCAAGATGATATGCCGGCTCAA 59.895 45.455 29.70 13.42 0.00 3.02
500 507 3.079578 CAAGATGATATGCCGGCTCAAT 58.920 45.455 29.70 17.87 0.00 2.57
501 508 2.983229 AGATGATATGCCGGCTCAATC 58.017 47.619 29.70 24.84 0.00 2.67
502 509 2.570752 AGATGATATGCCGGCTCAATCT 59.429 45.455 29.70 22.78 0.00 2.40
503 510 2.936919 TGATATGCCGGCTCAATCTT 57.063 45.000 29.70 4.14 0.00 2.40
504 511 3.213206 TGATATGCCGGCTCAATCTTT 57.787 42.857 29.70 3.35 0.00 2.52
505 512 3.554934 TGATATGCCGGCTCAATCTTTT 58.445 40.909 29.70 1.60 0.00 2.27
506 513 3.316029 TGATATGCCGGCTCAATCTTTTG 59.684 43.478 29.70 0.00 0.00 2.44
507 514 0.819582 ATGCCGGCTCAATCTTTTGG 59.180 50.000 29.70 0.00 33.44 3.28
508 515 0.251121 TGCCGGCTCAATCTTTTGGA 60.251 50.000 29.70 0.00 33.44 3.53
509 516 0.453390 GCCGGCTCAATCTTTTGGAG 59.547 55.000 22.15 0.00 33.44 3.86
510 517 1.098050 CCGGCTCAATCTTTTGGAGG 58.902 55.000 0.00 0.00 33.44 4.30
511 518 1.614317 CCGGCTCAATCTTTTGGAGGT 60.614 52.381 0.00 0.00 33.44 3.85
512 519 1.470098 CGGCTCAATCTTTTGGAGGTG 59.530 52.381 0.00 0.00 33.44 4.00
513 520 1.203287 GGCTCAATCTTTTGGAGGTGC 59.797 52.381 0.00 0.00 33.44 5.01
514 521 2.165998 GCTCAATCTTTTGGAGGTGCT 58.834 47.619 0.00 0.00 33.44 4.40
515 522 2.163211 GCTCAATCTTTTGGAGGTGCTC 59.837 50.000 0.00 0.00 33.44 4.26
516 523 3.415212 CTCAATCTTTTGGAGGTGCTCA 58.585 45.455 0.00 0.00 33.44 4.26
517 524 4.015084 CTCAATCTTTTGGAGGTGCTCAT 58.985 43.478 0.00 0.00 33.44 2.90
518 525 5.178096 TCAATCTTTTGGAGGTGCTCATA 57.822 39.130 0.00 0.00 33.44 2.15
519 526 5.188434 TCAATCTTTTGGAGGTGCTCATAG 58.812 41.667 0.00 0.00 33.44 2.23
520 527 3.634397 TCTTTTGGAGGTGCTCATAGG 57.366 47.619 0.00 0.00 31.08 2.57
521 528 2.239654 TCTTTTGGAGGTGCTCATAGGG 59.760 50.000 0.00 0.00 31.08 3.53
522 529 0.918983 TTTGGAGGTGCTCATAGGGG 59.081 55.000 0.00 0.00 31.08 4.79
523 530 0.253160 TTGGAGGTGCTCATAGGGGT 60.253 55.000 0.00 0.00 31.08 4.95
524 531 0.639943 TGGAGGTGCTCATAGGGGTA 59.360 55.000 0.00 0.00 31.08 3.69
525 532 1.049402 GGAGGTGCTCATAGGGGTAC 58.951 60.000 0.00 0.00 31.08 3.34
526 533 1.413227 GGAGGTGCTCATAGGGGTACT 60.413 57.143 0.00 0.00 31.08 2.73
527 534 1.964933 GAGGTGCTCATAGGGGTACTC 59.035 57.143 0.00 0.00 0.00 2.59
528 535 1.291033 AGGTGCTCATAGGGGTACTCA 59.709 52.381 0.00 0.00 0.00 3.41
529 536 2.090494 AGGTGCTCATAGGGGTACTCAT 60.090 50.000 0.00 0.00 0.00 2.90
530 537 3.142217 AGGTGCTCATAGGGGTACTCATA 59.858 47.826 0.00 0.00 0.00 2.15
531 538 3.511934 GGTGCTCATAGGGGTACTCATAG 59.488 52.174 0.00 0.00 0.00 2.23
532 539 4.408276 GTGCTCATAGGGGTACTCATAGA 58.592 47.826 0.00 0.00 0.00 1.98
533 540 4.461081 GTGCTCATAGGGGTACTCATAGAG 59.539 50.000 0.00 2.61 35.52 2.43
534 541 4.020543 GCTCATAGGGGTACTCATAGAGG 58.979 52.174 12.62 0.00 33.35 3.69
535 542 4.509482 GCTCATAGGGGTACTCATAGAGGT 60.509 50.000 12.62 0.00 33.35 3.85
536 543 5.281089 GCTCATAGGGGTACTCATAGAGGTA 60.281 48.000 12.62 0.00 33.35 3.08
537 544 6.390048 TCATAGGGGTACTCATAGAGGTAG 57.610 45.833 0.00 0.00 33.35 3.18
538 545 5.253330 TCATAGGGGTACTCATAGAGGTAGG 59.747 48.000 0.00 0.00 33.35 3.18
539 546 2.723010 AGGGGTACTCATAGAGGTAGGG 59.277 54.545 0.00 0.00 33.35 3.53
540 547 2.450115 GGGGTACTCATAGAGGTAGGGT 59.550 54.545 0.00 0.00 33.35 4.34
541 548 3.498334 GGGTACTCATAGAGGTAGGGTG 58.502 54.545 0.00 0.00 33.35 4.61
542 549 3.117208 GGGTACTCATAGAGGTAGGGTGT 60.117 52.174 0.00 0.00 33.35 4.16
543 550 3.890147 GGTACTCATAGAGGTAGGGTGTG 59.110 52.174 0.00 0.00 33.35 3.82
544 551 2.389715 ACTCATAGAGGTAGGGTGTGC 58.610 52.381 0.00 0.00 33.35 4.57
545 552 1.338337 CTCATAGAGGTAGGGTGTGCG 59.662 57.143 0.00 0.00 0.00 5.34
546 553 1.112113 CATAGAGGTAGGGTGTGCGT 58.888 55.000 0.00 0.00 0.00 5.24
547 554 1.112113 ATAGAGGTAGGGTGTGCGTG 58.888 55.000 0.00 0.00 0.00 5.34
548 555 0.251474 TAGAGGTAGGGTGTGCGTGT 60.251 55.000 0.00 0.00 0.00 4.49
549 556 1.374252 GAGGTAGGGTGTGCGTGTG 60.374 63.158 0.00 0.00 0.00 3.82
550 557 2.095978 GAGGTAGGGTGTGCGTGTGT 62.096 60.000 0.00 0.00 0.00 3.72
551 558 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
552 559 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
555 562 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
556 563 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
557 564 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
558 565 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
559 566 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
560 567 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
561 568 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
562 569 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
563 570 0.389296 CGTGTGTGCGTTCATAGGGA 60.389 55.000 0.00 0.00 0.00 4.20
564 571 1.739035 CGTGTGTGCGTTCATAGGGAT 60.739 52.381 0.00 0.00 0.00 3.85
565 572 1.665679 GTGTGTGCGTTCATAGGGATG 59.334 52.381 0.00 0.00 0.00 3.51
566 573 1.552792 TGTGTGCGTTCATAGGGATGA 59.447 47.619 0.00 0.00 40.45 2.92
567 574 2.205074 GTGTGCGTTCATAGGGATGAG 58.795 52.381 0.00 0.00 43.03 2.90
568 575 1.831106 TGTGCGTTCATAGGGATGAGT 59.169 47.619 0.00 0.00 43.03 3.41
569 576 2.205074 GTGCGTTCATAGGGATGAGTG 58.795 52.381 0.00 0.00 43.03 3.51
570 577 1.831106 TGCGTTCATAGGGATGAGTGT 59.169 47.619 0.00 0.00 43.03 3.55
571 578 3.028130 TGCGTTCATAGGGATGAGTGTA 58.972 45.455 0.00 0.00 43.03 2.90
572 579 3.641436 TGCGTTCATAGGGATGAGTGTAT 59.359 43.478 0.00 0.00 43.03 2.29
573 580 3.990469 GCGTTCATAGGGATGAGTGTATG 59.010 47.826 0.00 0.00 43.03 2.39
574 581 3.990469 CGTTCATAGGGATGAGTGTATGC 59.010 47.826 0.00 0.00 43.03 3.14
575 582 3.942130 TCATAGGGATGAGTGTATGCG 57.058 47.619 0.00 0.00 37.15 4.73
576 583 2.029020 TCATAGGGATGAGTGTATGCGC 60.029 50.000 0.00 0.00 37.15 6.09
577 584 0.313987 TAGGGATGAGTGTATGCGCG 59.686 55.000 0.00 0.00 0.00 6.86
578 585 1.227263 GGGATGAGTGTATGCGCGT 60.227 57.895 8.43 7.55 0.00 6.01
579 586 1.490693 GGGATGAGTGTATGCGCGTG 61.491 60.000 13.61 0.00 0.00 5.34
580 587 0.806102 GGATGAGTGTATGCGCGTGT 60.806 55.000 13.61 0.00 0.00 4.49
581 588 1.535226 GGATGAGTGTATGCGCGTGTA 60.535 52.381 13.61 0.00 0.00 2.90
582 589 1.517276 GATGAGTGTATGCGCGTGTAC 59.483 52.381 13.61 11.02 0.00 2.90
583 590 0.241481 TGAGTGTATGCGCGTGTACA 59.759 50.000 13.61 17.65 0.00 2.90
584 591 1.135228 TGAGTGTATGCGCGTGTACAT 60.135 47.619 22.16 13.68 33.78 2.29
585 592 1.255342 GAGTGTATGCGCGTGTACATG 59.745 52.381 22.16 10.89 33.78 3.21
586 593 1.135228 AGTGTATGCGCGTGTACATGA 60.135 47.619 19.38 0.00 33.78 3.07
587 594 1.255342 GTGTATGCGCGTGTACATGAG 59.745 52.381 19.38 16.49 33.78 2.90
588 595 0.229753 GTATGCGCGTGTACATGAGC 59.770 55.000 29.98 29.98 42.34 4.26
591 598 2.880879 CGCGTGTACATGAGCGCT 60.881 61.111 23.08 11.27 46.56 5.92
592 599 2.444624 CGCGTGTACATGAGCGCTT 61.445 57.895 23.08 0.00 46.56 4.68
593 600 1.059369 GCGTGTACATGAGCGCTTG 59.941 57.895 19.38 9.93 45.48 4.01
594 601 1.626654 GCGTGTACATGAGCGCTTGT 61.627 55.000 19.38 18.09 45.48 3.16
595 602 0.093535 CGTGTACATGAGCGCTTGTG 59.906 55.000 22.01 19.92 34.61 3.33
596 603 1.148310 GTGTACATGAGCGCTTGTGT 58.852 50.000 25.24 25.24 34.61 3.72
597 604 1.126846 GTGTACATGAGCGCTTGTGTC 59.873 52.381 25.53 17.38 34.61 3.67
598 605 1.000843 TGTACATGAGCGCTTGTGTCT 59.999 47.619 25.53 10.42 34.61 3.41
599 606 2.230266 TGTACATGAGCGCTTGTGTCTA 59.770 45.455 25.53 15.93 34.61 2.59
600 607 2.680312 ACATGAGCGCTTGTGTCTAT 57.320 45.000 13.26 0.00 31.88 1.98
601 608 3.801114 ACATGAGCGCTTGTGTCTATA 57.199 42.857 13.26 0.00 31.88 1.31
602 609 3.448686 ACATGAGCGCTTGTGTCTATAC 58.551 45.455 13.26 0.00 31.88 1.47
603 610 3.131223 ACATGAGCGCTTGTGTCTATACT 59.869 43.478 13.26 0.00 31.88 2.12
604 611 3.150848 TGAGCGCTTGTGTCTATACTG 57.849 47.619 13.26 0.00 0.00 2.74
605 612 2.752903 TGAGCGCTTGTGTCTATACTGA 59.247 45.455 13.26 0.00 0.00 3.41
606 613 3.381590 TGAGCGCTTGTGTCTATACTGAT 59.618 43.478 13.26 0.00 0.00 2.90
607 614 3.711086 AGCGCTTGTGTCTATACTGATG 58.289 45.455 2.64 0.00 0.00 3.07
608 615 2.219674 GCGCTTGTGTCTATACTGATGC 59.780 50.000 0.00 0.00 0.00 3.91
609 616 3.711086 CGCTTGTGTCTATACTGATGCT 58.289 45.455 0.00 0.00 0.00 3.79
610 617 4.793028 GCGCTTGTGTCTATACTGATGCTA 60.793 45.833 0.00 0.00 0.00 3.49
611 618 5.281727 CGCTTGTGTCTATACTGATGCTAA 58.718 41.667 0.00 0.00 0.00 3.09
612 619 5.748630 CGCTTGTGTCTATACTGATGCTAAA 59.251 40.000 0.00 0.00 0.00 1.85
613 620 6.255670 CGCTTGTGTCTATACTGATGCTAAAA 59.744 38.462 0.00 0.00 0.00 1.52
614 621 7.201522 CGCTTGTGTCTATACTGATGCTAAAAA 60.202 37.037 0.00 0.00 0.00 1.94
776 783 1.567175 GTCTCTCCTACCTGGACTCCT 59.433 57.143 0.00 0.00 40.56 3.69
839 846 0.673644 AAACTGAGCCCGATCAACCG 60.674 55.000 0.00 0.00 0.00 4.44
940 972 5.849357 TTGTATAATCTTGTCGCGTGTTT 57.151 34.783 5.77 0.00 0.00 2.83
957 989 6.367421 GCGTGTTTCATGAAGTTGTTACATA 58.633 36.000 8.41 0.00 0.00 2.29
1008 1071 0.740868 GCTGCGGCTACACATCTCAA 60.741 55.000 11.21 0.00 35.22 3.02
1013 1076 3.259064 GCGGCTACACATCTCAAAGTTA 58.741 45.455 0.00 0.00 0.00 2.24
1014 1077 3.682858 GCGGCTACACATCTCAAAGTTAA 59.317 43.478 0.00 0.00 0.00 2.01
1015 1078 4.332819 GCGGCTACACATCTCAAAGTTAAT 59.667 41.667 0.00 0.00 0.00 1.40
1016 1079 5.522460 GCGGCTACACATCTCAAAGTTAATA 59.478 40.000 0.00 0.00 0.00 0.98
1017 1080 6.202954 GCGGCTACACATCTCAAAGTTAATAT 59.797 38.462 0.00 0.00 0.00 1.28
1018 1081 7.567571 CGGCTACACATCTCAAAGTTAATATG 58.432 38.462 0.00 0.00 0.00 1.78
1019 1082 7.355778 GGCTACACATCTCAAAGTTAATATGC 58.644 38.462 0.00 0.00 0.00 3.14
1041 1107 1.436600 AGATGAAGCTCGTTGTGCTG 58.563 50.000 0.00 0.00 41.03 4.41
1044 1110 0.179086 TGAAGCTCGTTGTGCTGTCA 60.179 50.000 0.00 0.00 41.03 3.58
1614 1727 0.320421 GACCAGCACGGCTACTTCAA 60.320 55.000 0.00 0.00 36.40 2.69
1843 1956 1.550976 GGGAAGAACCTCATCGACTGT 59.449 52.381 0.00 0.00 38.98 3.55
1908 2023 4.734695 GCCGGCCTTCTGATTAAATTTGAG 60.735 45.833 18.11 0.00 0.00 3.02
1975 2098 3.918220 CTCATTGGCTCGACGCGC 61.918 66.667 5.73 0.07 40.44 6.86
2069 2192 1.434555 TAAAATGCCGTCACAGTCCG 58.565 50.000 0.00 0.00 0.00 4.79
2165 2289 3.071312 TGCCTTTTGATTTTGCTCCACAT 59.929 39.130 0.00 0.00 0.00 3.21
2175 2299 4.944962 TTTGCTCCACATATTCTGAACG 57.055 40.909 0.00 0.00 0.00 3.95
2252 2376 4.143543 TGTTTTGATGAGATGACCTTGCA 58.856 39.130 0.00 0.00 0.00 4.08
2253 2377 4.216902 TGTTTTGATGAGATGACCTTGCAG 59.783 41.667 0.00 0.00 0.00 4.41
2255 2379 3.708403 TGATGAGATGACCTTGCAGTT 57.292 42.857 0.00 0.00 0.00 3.16
2256 2380 3.340928 TGATGAGATGACCTTGCAGTTG 58.659 45.455 0.00 0.00 0.00 3.16
2258 2382 1.271543 TGAGATGACCTTGCAGTTGGG 60.272 52.381 7.27 2.35 0.00 4.12
2259 2383 1.003580 GAGATGACCTTGCAGTTGGGA 59.996 52.381 7.27 0.00 0.00 4.37
2261 2385 2.042162 AGATGACCTTGCAGTTGGGATT 59.958 45.455 7.27 0.00 0.00 3.01
2262 2386 1.619654 TGACCTTGCAGTTGGGATTG 58.380 50.000 7.27 0.00 0.00 2.67
2264 2388 0.188342 ACCTTGCAGTTGGGATTGGT 59.812 50.000 7.27 0.00 0.00 3.67
2265 2389 0.604578 CCTTGCAGTTGGGATTGGTG 59.395 55.000 0.00 0.00 0.00 4.17
2266 2390 0.037975 CTTGCAGTTGGGATTGGTGC 60.038 55.000 0.00 0.00 34.62 5.01
2267 2391 1.804396 TTGCAGTTGGGATTGGTGCG 61.804 55.000 0.00 0.00 36.92 5.34
2270 2394 1.150536 AGTTGGGATTGGTGCGTGT 59.849 52.632 0.00 0.00 0.00 4.49
2272 2396 0.889186 GTTGGGATTGGTGCGTGTCT 60.889 55.000 0.00 0.00 0.00 3.41
2273 2397 0.179004 TTGGGATTGGTGCGTGTCTT 60.179 50.000 0.00 0.00 0.00 3.01
2274 2398 0.605319 TGGGATTGGTGCGTGTCTTC 60.605 55.000 0.00 0.00 0.00 2.87
2277 2401 1.464997 GGATTGGTGCGTGTCTTCTTC 59.535 52.381 0.00 0.00 0.00 2.87
2278 2402 1.126846 GATTGGTGCGTGTCTTCTTCG 59.873 52.381 0.00 0.00 0.00 3.79
2279 2403 0.179094 TTGGTGCGTGTCTTCTTCGT 60.179 50.000 0.00 0.00 0.00 3.85
2280 2404 0.179094 TGGTGCGTGTCTTCTTCGTT 60.179 50.000 0.00 0.00 0.00 3.85
2281 2405 0.232303 GGTGCGTGTCTTCTTCGTTG 59.768 55.000 0.00 0.00 0.00 4.10
2282 2406 0.232303 GTGCGTGTCTTCTTCGTTGG 59.768 55.000 0.00 0.00 0.00 3.77
2283 2407 0.179094 TGCGTGTCTTCTTCGTTGGT 60.179 50.000 0.00 0.00 0.00 3.67
2284 2408 0.935196 GCGTGTCTTCTTCGTTGGTT 59.065 50.000 0.00 0.00 0.00 3.67
2285 2409 1.332904 GCGTGTCTTCTTCGTTGGTTG 60.333 52.381 0.00 0.00 0.00 3.77
2286 2410 1.260561 CGTGTCTTCTTCGTTGGTTGG 59.739 52.381 0.00 0.00 0.00 3.77
2287 2411 1.602377 GTGTCTTCTTCGTTGGTTGGG 59.398 52.381 0.00 0.00 0.00 4.12
2288 2412 1.235724 GTCTTCTTCGTTGGTTGGGG 58.764 55.000 0.00 0.00 0.00 4.96
2289 2413 0.841289 TCTTCTTCGTTGGTTGGGGT 59.159 50.000 0.00 0.00 0.00 4.95
2290 2414 2.048601 TCTTCTTCGTTGGTTGGGGTA 58.951 47.619 0.00 0.00 0.00 3.69
2291 2415 2.438763 TCTTCTTCGTTGGTTGGGGTAA 59.561 45.455 0.00 0.00 0.00 2.85
2292 2416 2.554370 TCTTCGTTGGTTGGGGTAAG 57.446 50.000 0.00 0.00 0.00 2.34
2315 2705 5.725362 GAGCATCTATAGCCGGATTTTAGT 58.275 41.667 5.05 0.00 0.00 2.24
2318 2708 7.676947 AGCATCTATAGCCGGATTTTAGTAAA 58.323 34.615 5.05 0.00 0.00 2.01
2578 2968 3.267900 CGCGTCTCGGGATAATGTT 57.732 52.632 0.00 0.00 42.31 2.71
2584 2974 1.411246 TCTCGGGATAATGTTGGACGG 59.589 52.381 0.00 0.00 0.00 4.79
2586 2976 0.179056 CGGGATAATGTTGGACGGCT 60.179 55.000 0.00 0.00 0.00 5.52
2608 2998 3.012518 CCTCATAAGTGCTCAACCTTGG 58.987 50.000 0.00 0.00 0.00 3.61
2613 3003 0.839946 AGTGCTCAACCTTGGAGTGT 59.160 50.000 0.00 0.00 34.83 3.55
2638 3028 2.046507 CCTCACACCAGCTGCTCC 60.047 66.667 8.66 0.00 0.00 4.70
2644 3034 1.298993 CACCAGCTGCTCCTCATGT 59.701 57.895 8.66 0.00 0.00 3.21
2649 3040 2.580815 CTGCTCCTCATGTCGGCA 59.419 61.111 0.00 0.00 0.00 5.69
2673 3064 2.915463 CGGATGTAACGACAAGTGTCTC 59.085 50.000 9.63 0.00 42.66 3.36
2710 3101 2.682155 TACATGCGCATGGTAACTGA 57.318 45.000 43.46 22.19 42.91 3.41
2763 5109 2.169789 CATGGCAAGAGACGAGGCG 61.170 63.158 0.00 0.00 0.00 5.52
2784 5130 0.814010 GGTGGTGTCGTTTGCAGACT 60.814 55.000 5.77 0.00 39.24 3.24
2913 5261 1.228552 AAAGTGGAGGCGGCAACAT 60.229 52.632 13.08 0.00 0.00 2.71
2942 5291 6.111382 TGAATTCAATTTGTGGTGCTTTTCA 58.889 32.000 5.45 0.00 0.00 2.69
2956 5305 6.424176 GTGCTTTTCAAGTACCCTAGATTC 57.576 41.667 0.00 0.00 38.05 2.52
2975 5324 2.832838 TCTGAGCTCTGGGGTGAATAA 58.167 47.619 19.23 0.00 0.00 1.40
3021 5384 2.616842 ACCTGACAATGACGGTGTTTTC 59.383 45.455 0.00 0.00 0.00 2.29
3041 5404 1.006832 GCGTCGTTACCATGCTGAAT 58.993 50.000 0.00 0.00 0.00 2.57
3044 5407 1.064060 GTCGTTACCATGCTGAATGCC 59.936 52.381 0.00 0.00 42.00 4.40
3045 5408 0.381801 CGTTACCATGCTGAATGCCC 59.618 55.000 0.00 0.00 42.00 5.36
3046 5409 1.473258 GTTACCATGCTGAATGCCCA 58.527 50.000 0.00 0.00 42.00 5.36
3047 5410 2.034124 GTTACCATGCTGAATGCCCAT 58.966 47.619 0.00 0.00 42.00 4.00
3048 5411 1.985473 TACCATGCTGAATGCCCATC 58.015 50.000 0.00 0.00 42.00 3.51
3049 5412 0.032912 ACCATGCTGAATGCCCATCA 60.033 50.000 0.00 0.00 42.00 3.07
3050 5413 1.338107 CCATGCTGAATGCCCATCAT 58.662 50.000 0.00 0.00 42.00 2.45
3051 5414 2.158430 ACCATGCTGAATGCCCATCATA 60.158 45.455 0.00 0.00 42.00 2.15
3052 5415 3.096852 CCATGCTGAATGCCCATCATAT 58.903 45.455 0.00 0.00 42.00 1.78
3053 5416 3.513912 CCATGCTGAATGCCCATCATATT 59.486 43.478 0.00 0.00 42.00 1.28
3054 5417 4.020573 CCATGCTGAATGCCCATCATATTT 60.021 41.667 0.00 0.00 42.00 1.40
3055 5418 5.512404 CCATGCTGAATGCCCATCATATTTT 60.512 40.000 0.00 0.00 42.00 1.82
3056 5419 6.295405 CCATGCTGAATGCCCATCATATTTTA 60.295 38.462 0.00 0.00 42.00 1.52
3057 5420 6.921486 TGCTGAATGCCCATCATATTTTAT 57.079 33.333 0.00 0.00 42.00 1.40
3058 5421 8.471609 CATGCTGAATGCCCATCATATTTTATA 58.528 33.333 0.00 0.00 42.00 0.98
3059 5422 8.419922 TGCTGAATGCCCATCATATTTTATAA 57.580 30.769 0.00 0.00 42.00 0.98
3060 5423 8.306038 TGCTGAATGCCCATCATATTTTATAAC 58.694 33.333 0.00 0.00 42.00 1.89
3061 5424 7.761249 GCTGAATGCCCATCATATTTTATAACC 59.239 37.037 0.00 0.00 34.33 2.85
3062 5425 8.718158 TGAATGCCCATCATATTTTATAACCA 57.282 30.769 0.00 0.00 34.33 3.67
3063 5426 9.152327 TGAATGCCCATCATATTTTATAACCAA 57.848 29.630 0.00 0.00 34.33 3.67
3064 5427 9.995003 GAATGCCCATCATATTTTATAACCAAA 57.005 29.630 0.00 0.00 34.33 3.28
3066 5429 7.441017 TGCCCATCATATTTTATAACCAAAGC 58.559 34.615 0.00 0.00 0.00 3.51
3067 5430 7.070447 TGCCCATCATATTTTATAACCAAAGCA 59.930 33.333 0.00 0.00 0.00 3.91
3068 5431 7.930865 GCCCATCATATTTTATAACCAAAGCAA 59.069 33.333 0.00 0.00 0.00 3.91
3069 5432 9.829507 CCCATCATATTTTATAACCAAAGCAAA 57.170 29.630 0.00 0.00 0.00 3.68
3080 5443 7.903995 ATAACCAAAGCAAATTACCATGTTG 57.096 32.000 0.00 0.00 0.00 3.33
3081 5444 5.289083 ACCAAAGCAAATTACCATGTTGT 57.711 34.783 0.00 0.00 0.00 3.32
3082 5445 5.679601 ACCAAAGCAAATTACCATGTTGTT 58.320 33.333 0.00 0.00 0.00 2.83
3083 5446 6.821388 ACCAAAGCAAATTACCATGTTGTTA 58.179 32.000 0.00 0.00 0.00 2.41
3084 5447 7.449247 ACCAAAGCAAATTACCATGTTGTTAT 58.551 30.769 0.00 0.00 0.00 1.89
3085 5448 7.936301 ACCAAAGCAAATTACCATGTTGTTATT 59.064 29.630 0.00 0.00 0.00 1.40
3086 5449 8.442384 CCAAAGCAAATTACCATGTTGTTATTC 58.558 33.333 0.00 0.00 0.00 1.75
3087 5450 8.986847 CAAAGCAAATTACCATGTTGTTATTCA 58.013 29.630 0.00 0.00 0.00 2.57
3088 5451 9.723601 AAAGCAAATTACCATGTTGTTATTCAT 57.276 25.926 0.00 0.00 0.00 2.57
3089 5452 9.723601 AAGCAAATTACCATGTTGTTATTCATT 57.276 25.926 0.00 0.00 0.00 2.57
3090 5453 9.153721 AGCAAATTACCATGTTGTTATTCATTG 57.846 29.630 0.00 0.00 0.00 2.82
3091 5454 8.934825 GCAAATTACCATGTTGTTATTCATTGT 58.065 29.630 0.00 0.00 0.00 2.71
3098 5461 9.823647 ACCATGTTGTTATTCATTGTTACAAAA 57.176 25.926 0.66 0.00 31.29 2.44
3104 5467 9.959749 TTGTTATTCATTGTTACAAAAGACTCC 57.040 29.630 0.66 0.00 0.00 3.85
3105 5468 8.573035 TGTTATTCATTGTTACAAAAGACTCCC 58.427 33.333 0.66 0.00 0.00 4.30
3106 5469 8.573035 GTTATTCATTGTTACAAAAGACTCCCA 58.427 33.333 0.66 0.00 0.00 4.37
3107 5470 7.595819 ATTCATTGTTACAAAAGACTCCCAA 57.404 32.000 0.66 0.00 0.00 4.12
3108 5471 7.411486 TTCATTGTTACAAAAGACTCCCAAA 57.589 32.000 0.66 0.00 0.00 3.28
3109 5472 7.411486 TCATTGTTACAAAAGACTCCCAAAA 57.589 32.000 0.66 0.00 0.00 2.44
3110 5473 8.017418 TCATTGTTACAAAAGACTCCCAAAAT 57.983 30.769 0.66 0.00 0.00 1.82
3111 5474 9.137459 TCATTGTTACAAAAGACTCCCAAAATA 57.863 29.630 0.66 0.00 0.00 1.40
3112 5475 9.757227 CATTGTTACAAAAGACTCCCAAAATAA 57.243 29.630 0.66 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 2.235402 GTGTGAAATAGGTCGGGGAAGA 59.765 50.000 0.00 0.00 0.00 2.87
113 114 1.171549 TTTCAATGGAGCAGTGCGCA 61.172 50.000 20.77 5.66 46.13 6.09
114 115 0.730494 GTTTCAATGGAGCAGTGCGC 60.730 55.000 10.77 10.77 42.91 6.09
116 117 1.200948 GAGGTTTCAATGGAGCAGTGC 59.799 52.381 7.13 7.13 29.02 4.40
118 119 1.072331 ACGAGGTTTCAATGGAGCAGT 59.928 47.619 0.00 0.00 0.00 4.40
119 120 1.734465 GACGAGGTTTCAATGGAGCAG 59.266 52.381 0.00 0.00 0.00 4.24
201 203 7.852945 GCTAATAATAATGCTGTCGATTATGGC 59.147 37.037 0.00 0.00 0.00 4.40
269 276 2.106683 GGTTGATGGGTCGCTTCCG 61.107 63.158 1.03 0.00 0.00 4.30
284 291 3.331150 TCGCAATTTCATCGTACTGGTT 58.669 40.909 0.00 0.00 0.00 3.67
285 292 2.967362 TCGCAATTTCATCGTACTGGT 58.033 42.857 0.00 0.00 0.00 4.00
286 293 4.033932 TGATTCGCAATTTCATCGTACTGG 59.966 41.667 0.00 0.00 0.00 4.00
287 294 5.142635 TGATTCGCAATTTCATCGTACTG 57.857 39.130 0.00 0.00 0.00 2.74
288 295 5.560148 GTTGATTCGCAATTTCATCGTACT 58.440 37.500 0.00 0.00 39.03 2.73
289 296 4.430118 CGTTGATTCGCAATTTCATCGTAC 59.570 41.667 0.00 0.00 39.03 3.67
290 297 4.092237 ACGTTGATTCGCAATTTCATCGTA 59.908 37.500 10.08 0.00 41.41 3.43
291 298 3.120338 ACGTTGATTCGCAATTTCATCGT 60.120 39.130 7.16 7.16 39.58 3.73
292 299 3.235852 CACGTTGATTCGCAATTTCATCG 59.764 43.478 6.17 6.17 39.03 3.84
293 300 4.029418 CACACGTTGATTCGCAATTTCATC 59.971 41.667 0.00 0.00 39.03 2.92
294 301 3.913763 CACACGTTGATTCGCAATTTCAT 59.086 39.130 0.00 0.00 39.03 2.57
295 302 3.295785 CACACGTTGATTCGCAATTTCA 58.704 40.909 0.00 0.00 39.03 2.69
296 303 2.656422 CCACACGTTGATTCGCAATTTC 59.344 45.455 0.00 0.00 39.03 2.17
297 304 2.034053 ACCACACGTTGATTCGCAATTT 59.966 40.909 0.00 0.00 39.03 1.82
298 305 1.606668 ACCACACGTTGATTCGCAATT 59.393 42.857 0.00 0.00 39.03 2.32
299 306 1.234821 ACCACACGTTGATTCGCAAT 58.765 45.000 0.00 0.00 39.03 3.56
300 307 1.018148 AACCACACGTTGATTCGCAA 58.982 45.000 0.00 0.00 31.79 4.85
301 308 2.696566 AACCACACGTTGATTCGCA 58.303 47.368 0.00 0.00 31.79 5.10
309 316 1.828979 AACCAACTCAACCACACGTT 58.171 45.000 0.00 0.00 33.90 3.99
310 317 2.557317 CTAACCAACTCAACCACACGT 58.443 47.619 0.00 0.00 0.00 4.49
311 318 1.871039 CCTAACCAACTCAACCACACG 59.129 52.381 0.00 0.00 0.00 4.49
312 319 2.616842 CACCTAACCAACTCAACCACAC 59.383 50.000 0.00 0.00 0.00 3.82
313 320 2.422235 CCACCTAACCAACTCAACCACA 60.422 50.000 0.00 0.00 0.00 4.17
314 321 2.158726 TCCACCTAACCAACTCAACCAC 60.159 50.000 0.00 0.00 0.00 4.16
315 322 2.128535 TCCACCTAACCAACTCAACCA 58.871 47.619 0.00 0.00 0.00 3.67
316 323 2.158726 TGTCCACCTAACCAACTCAACC 60.159 50.000 0.00 0.00 0.00 3.77
317 324 3.139077 CTGTCCACCTAACCAACTCAAC 58.861 50.000 0.00 0.00 0.00 3.18
318 325 2.775384 ACTGTCCACCTAACCAACTCAA 59.225 45.455 0.00 0.00 0.00 3.02
319 326 2.104111 CACTGTCCACCTAACCAACTCA 59.896 50.000 0.00 0.00 0.00 3.41
320 327 2.550208 CCACTGTCCACCTAACCAACTC 60.550 54.545 0.00 0.00 0.00 3.01
321 328 1.420138 CCACTGTCCACCTAACCAACT 59.580 52.381 0.00 0.00 0.00 3.16
322 329 1.142262 ACCACTGTCCACCTAACCAAC 59.858 52.381 0.00 0.00 0.00 3.77
323 330 1.513858 ACCACTGTCCACCTAACCAA 58.486 50.000 0.00 0.00 0.00 3.67
324 331 2.402182 TACCACTGTCCACCTAACCA 57.598 50.000 0.00 0.00 0.00 3.67
325 332 2.169978 GGATACCACTGTCCACCTAACC 59.830 54.545 0.00 0.00 34.57 2.85
326 333 3.538634 GGATACCACTGTCCACCTAAC 57.461 52.381 0.00 0.00 34.57 2.34
357 364 2.519013 GAGCAACAGGATTTGAACCCT 58.481 47.619 0.00 0.00 0.00 4.34
358 365 1.200020 CGAGCAACAGGATTTGAACCC 59.800 52.381 0.00 0.00 0.00 4.11
359 366 1.401539 GCGAGCAACAGGATTTGAACC 60.402 52.381 0.00 0.00 0.00 3.62
360 367 1.266718 TGCGAGCAACAGGATTTGAAC 59.733 47.619 0.00 0.00 0.00 3.18
361 368 1.603456 TGCGAGCAACAGGATTTGAA 58.397 45.000 0.00 0.00 0.00 2.69
362 369 1.825090 ATGCGAGCAACAGGATTTGA 58.175 45.000 0.57 0.00 0.00 2.69
363 370 2.642139 AATGCGAGCAACAGGATTTG 57.358 45.000 0.57 0.00 0.00 2.32
364 371 4.641989 AGAATAATGCGAGCAACAGGATTT 59.358 37.500 0.57 0.00 31.11 2.17
365 372 4.202441 AGAATAATGCGAGCAACAGGATT 58.798 39.130 0.57 0.00 33.17 3.01
366 373 3.813443 AGAATAATGCGAGCAACAGGAT 58.187 40.909 0.57 0.00 0.00 3.24
367 374 3.266510 AGAATAATGCGAGCAACAGGA 57.733 42.857 0.57 0.00 0.00 3.86
368 375 3.374988 TCAAGAATAATGCGAGCAACAGG 59.625 43.478 0.57 0.00 0.00 4.00
369 376 4.604843 TCAAGAATAATGCGAGCAACAG 57.395 40.909 0.57 0.00 0.00 3.16
370 377 5.565592 ATTCAAGAATAATGCGAGCAACA 57.434 34.783 0.57 0.00 0.00 3.33
371 378 6.875926 AAATTCAAGAATAATGCGAGCAAC 57.124 33.333 0.57 0.00 0.00 4.17
372 379 9.585099 AAATAAATTCAAGAATAATGCGAGCAA 57.415 25.926 0.57 0.00 0.00 3.91
373 380 9.236691 GAAATAAATTCAAGAATAATGCGAGCA 57.763 29.630 0.00 0.00 37.99 4.26
374 381 9.236691 TGAAATAAATTCAAGAATAATGCGAGC 57.763 29.630 0.00 0.00 44.94 5.03
388 395 8.116651 TCACCGGAAATTCTGAAATAAATTCA 57.883 30.769 9.46 0.00 45.71 2.57
389 396 9.023967 CATCACCGGAAATTCTGAAATAAATTC 57.976 33.333 9.46 0.00 38.60 2.17
390 397 7.492344 GCATCACCGGAAATTCTGAAATAAATT 59.508 33.333 9.46 0.00 0.00 1.82
391 398 6.980397 GCATCACCGGAAATTCTGAAATAAAT 59.020 34.615 9.46 0.00 0.00 1.40
392 399 6.329496 GCATCACCGGAAATTCTGAAATAAA 58.671 36.000 9.46 0.00 0.00 1.40
393 400 5.448496 CGCATCACCGGAAATTCTGAAATAA 60.448 40.000 9.46 0.00 0.00 1.40
394 401 4.035091 CGCATCACCGGAAATTCTGAAATA 59.965 41.667 9.46 0.00 0.00 1.40
395 402 3.181497 CGCATCACCGGAAATTCTGAAAT 60.181 43.478 9.46 0.00 0.00 2.17
396 403 2.161410 CGCATCACCGGAAATTCTGAAA 59.839 45.455 9.46 0.00 0.00 2.69
397 404 1.737236 CGCATCACCGGAAATTCTGAA 59.263 47.619 9.46 0.00 0.00 3.02
398 405 1.368641 CGCATCACCGGAAATTCTGA 58.631 50.000 9.46 0.00 0.00 3.27
399 406 0.248215 GCGCATCACCGGAAATTCTG 60.248 55.000 9.46 0.00 0.00 3.02
400 407 0.392998 AGCGCATCACCGGAAATTCT 60.393 50.000 9.46 0.00 0.00 2.40
401 408 0.451783 AAGCGCATCACCGGAAATTC 59.548 50.000 9.46 0.00 0.00 2.17
402 409 0.887933 AAAGCGCATCACCGGAAATT 59.112 45.000 9.46 0.00 0.00 1.82
403 410 0.451783 GAAAGCGCATCACCGGAAAT 59.548 50.000 9.46 0.00 0.00 2.17
404 411 0.886938 TGAAAGCGCATCACCGGAAA 60.887 50.000 9.46 0.00 0.00 3.13
405 412 1.298157 CTGAAAGCGCATCACCGGAA 61.298 55.000 9.46 0.00 0.00 4.30
406 413 1.741401 CTGAAAGCGCATCACCGGA 60.741 57.895 9.46 0.00 0.00 5.14
407 414 2.034879 ACTGAAAGCGCATCACCGG 61.035 57.895 11.47 0.00 37.60 5.28
408 415 1.133253 CACTGAAAGCGCATCACCG 59.867 57.895 11.47 5.58 37.60 4.94
409 416 1.503542 CCACTGAAAGCGCATCACC 59.496 57.895 11.47 0.00 37.60 4.02
410 417 0.955428 TCCCACTGAAAGCGCATCAC 60.955 55.000 11.47 0.00 37.60 3.06
411 418 0.674581 CTCCCACTGAAAGCGCATCA 60.675 55.000 11.47 13.15 37.60 3.07
412 419 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
413 420 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
414 421 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
415 422 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
416 423 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
417 424 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
418 425 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
419 426 1.420430 AACGTCTCCTCCCACTGAAA 58.580 50.000 0.00 0.00 0.00 2.69
420 427 1.343465 GAAACGTCTCCTCCCACTGAA 59.657 52.381 0.00 0.00 0.00 3.02
421 428 0.966920 GAAACGTCTCCTCCCACTGA 59.033 55.000 0.00 0.00 0.00 3.41
422 429 0.037232 GGAAACGTCTCCTCCCACTG 60.037 60.000 0.00 0.00 32.21 3.66
423 430 2.363297 GGAAACGTCTCCTCCCACT 58.637 57.895 0.00 0.00 32.21 4.00
444 451 4.592936 CTAGGCGCCTCGTCGTCG 62.593 72.222 36.73 9.83 39.34 5.12
445 452 4.253257 CCTAGGCGCCTCGTCGTC 62.253 72.222 36.73 0.00 36.23 4.20
448 455 4.208686 CACCCTAGGCGCCTCGTC 62.209 72.222 36.73 1.08 0.00 4.20
449 456 4.753662 TCACCCTAGGCGCCTCGT 62.754 66.667 36.73 24.45 0.00 4.18
450 457 4.208686 GTCACCCTAGGCGCCTCG 62.209 72.222 36.73 27.95 0.00 4.63
451 458 2.299503 GAAGTCACCCTAGGCGCCTC 62.300 65.000 36.73 17.40 0.00 4.70
452 459 2.284699 AAGTCACCCTAGGCGCCT 60.285 61.111 34.85 34.85 0.00 5.52
453 460 2.187163 GAAGTCACCCTAGGCGCC 59.813 66.667 21.89 21.89 0.00 6.53
454 461 1.660560 TACGAAGTCACCCTAGGCGC 61.661 60.000 2.05 0.00 43.93 6.53
455 462 0.813184 TTACGAAGTCACCCTAGGCG 59.187 55.000 2.05 1.85 43.93 5.52
456 463 3.132467 AGATTTACGAAGTCACCCTAGGC 59.868 47.826 2.05 0.00 43.93 3.93
457 464 4.401519 TGAGATTTACGAAGTCACCCTAGG 59.598 45.833 0.06 0.06 43.93 3.02
458 465 5.578005 TGAGATTTACGAAGTCACCCTAG 57.422 43.478 0.00 0.00 43.93 3.02
459 466 5.713389 TCTTGAGATTTACGAAGTCACCCTA 59.287 40.000 0.00 0.00 43.93 3.53
460 467 4.527038 TCTTGAGATTTACGAAGTCACCCT 59.473 41.667 0.00 0.00 43.93 4.34
461 468 4.817517 TCTTGAGATTTACGAAGTCACCC 58.182 43.478 0.00 0.00 43.93 4.61
462 469 6.100004 TCATCTTGAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 35.39 4.02
463 470 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
464 471 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
465 472 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
466 473 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
467 474 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
468 475 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
469 476 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
470 477 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
471 478 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
472 479 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
473 480 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
474 481 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
475 482 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
476 483 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
477 484 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
478 485 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
479 486 2.174363 TGAGCCGGCATATCATCTTG 57.826 50.000 31.54 0.00 0.00 3.02
480 487 2.936919 TTGAGCCGGCATATCATCTT 57.063 45.000 31.54 3.33 0.00 2.40
481 488 2.570752 AGATTGAGCCGGCATATCATCT 59.429 45.455 31.54 22.33 0.00 2.90
482 489 2.983229 AGATTGAGCCGGCATATCATC 58.017 47.619 31.54 20.52 0.00 2.92
483 490 3.430042 AAGATTGAGCCGGCATATCAT 57.570 42.857 31.54 17.14 0.00 2.45
484 491 2.936919 AAGATTGAGCCGGCATATCA 57.063 45.000 31.54 21.33 0.00 2.15
485 492 3.304928 CCAAAAGATTGAGCCGGCATATC 60.305 47.826 31.54 25.17 38.94 1.63
486 493 2.624838 CCAAAAGATTGAGCCGGCATAT 59.375 45.455 31.54 18.37 38.94 1.78
487 494 2.023673 CCAAAAGATTGAGCCGGCATA 58.976 47.619 31.54 14.63 38.94 3.14
488 495 0.819582 CCAAAAGATTGAGCCGGCAT 59.180 50.000 31.54 14.27 38.94 4.40
489 496 0.251121 TCCAAAAGATTGAGCCGGCA 60.251 50.000 31.54 8.70 38.94 5.69
490 497 0.453390 CTCCAAAAGATTGAGCCGGC 59.547 55.000 21.89 21.89 38.94 6.13
491 498 1.098050 CCTCCAAAAGATTGAGCCGG 58.902 55.000 0.00 0.00 38.94 6.13
492 499 1.470098 CACCTCCAAAAGATTGAGCCG 59.530 52.381 0.00 0.00 38.94 5.52
493 500 1.203287 GCACCTCCAAAAGATTGAGCC 59.797 52.381 0.00 0.00 38.94 4.70
494 501 2.163211 GAGCACCTCCAAAAGATTGAGC 59.837 50.000 0.00 0.00 38.94 4.26
495 502 3.415212 TGAGCACCTCCAAAAGATTGAG 58.585 45.455 0.00 0.00 38.94 3.02
496 503 3.507162 TGAGCACCTCCAAAAGATTGA 57.493 42.857 0.00 0.00 38.94 2.57
497 504 4.337555 CCTATGAGCACCTCCAAAAGATTG 59.662 45.833 0.00 0.00 36.25 2.67
498 505 4.530875 CCTATGAGCACCTCCAAAAGATT 58.469 43.478 0.00 0.00 0.00 2.40
499 506 3.117738 CCCTATGAGCACCTCCAAAAGAT 60.118 47.826 0.00 0.00 0.00 2.40
500 507 2.239654 CCCTATGAGCACCTCCAAAAGA 59.760 50.000 0.00 0.00 0.00 2.52
501 508 2.648059 CCCTATGAGCACCTCCAAAAG 58.352 52.381 0.00 0.00 0.00 2.27
502 509 1.284785 CCCCTATGAGCACCTCCAAAA 59.715 52.381 0.00 0.00 0.00 2.44
503 510 0.918983 CCCCTATGAGCACCTCCAAA 59.081 55.000 0.00 0.00 0.00 3.28
504 511 0.253160 ACCCCTATGAGCACCTCCAA 60.253 55.000 0.00 0.00 0.00 3.53
505 512 0.639943 TACCCCTATGAGCACCTCCA 59.360 55.000 0.00 0.00 0.00 3.86
506 513 1.049402 GTACCCCTATGAGCACCTCC 58.951 60.000 0.00 0.00 0.00 4.30
507 514 1.964933 GAGTACCCCTATGAGCACCTC 59.035 57.143 0.00 0.00 0.00 3.85
508 515 1.291033 TGAGTACCCCTATGAGCACCT 59.709 52.381 0.00 0.00 0.00 4.00
509 516 1.789523 TGAGTACCCCTATGAGCACC 58.210 55.000 0.00 0.00 0.00 5.01
510 517 4.408276 TCTATGAGTACCCCTATGAGCAC 58.592 47.826 0.00 0.00 0.00 4.40
511 518 4.509302 CCTCTATGAGTACCCCTATGAGCA 60.509 50.000 0.00 0.00 0.00 4.26
512 519 4.020543 CCTCTATGAGTACCCCTATGAGC 58.979 52.174 0.00 0.00 0.00 4.26
513 520 5.263872 ACCTCTATGAGTACCCCTATGAG 57.736 47.826 0.00 0.00 0.00 2.90
514 521 5.253330 CCTACCTCTATGAGTACCCCTATGA 59.747 48.000 0.00 0.00 0.00 2.15
515 522 5.511363 CCTACCTCTATGAGTACCCCTATG 58.489 50.000 0.00 0.00 0.00 2.23
516 523 4.544968 CCCTACCTCTATGAGTACCCCTAT 59.455 50.000 0.00 0.00 0.00 2.57
517 524 3.921486 CCCTACCTCTATGAGTACCCCTA 59.079 52.174 0.00 0.00 0.00 3.53
518 525 2.723010 CCCTACCTCTATGAGTACCCCT 59.277 54.545 0.00 0.00 0.00 4.79
519 526 2.450115 ACCCTACCTCTATGAGTACCCC 59.550 54.545 0.00 0.00 0.00 4.95
520 527 3.117208 ACACCCTACCTCTATGAGTACCC 60.117 52.174 0.00 0.00 0.00 3.69
521 528 3.890147 CACACCCTACCTCTATGAGTACC 59.110 52.174 0.00 0.00 0.00 3.34
522 529 3.318557 GCACACCCTACCTCTATGAGTAC 59.681 52.174 0.00 0.00 0.00 2.73
523 530 3.563223 GCACACCCTACCTCTATGAGTA 58.437 50.000 0.00 0.00 0.00 2.59
524 531 2.389715 GCACACCCTACCTCTATGAGT 58.610 52.381 0.00 0.00 0.00 3.41
525 532 1.338337 CGCACACCCTACCTCTATGAG 59.662 57.143 0.00 0.00 0.00 2.90
526 533 1.341679 ACGCACACCCTACCTCTATGA 60.342 52.381 0.00 0.00 0.00 2.15
527 534 1.112113 ACGCACACCCTACCTCTATG 58.888 55.000 0.00 0.00 0.00 2.23
528 535 1.112113 CACGCACACCCTACCTCTAT 58.888 55.000 0.00 0.00 0.00 1.98
529 536 0.251474 ACACGCACACCCTACCTCTA 60.251 55.000 0.00 0.00 0.00 2.43
530 537 1.533273 ACACGCACACCCTACCTCT 60.533 57.895 0.00 0.00 0.00 3.69
531 538 1.374252 CACACGCACACCCTACCTC 60.374 63.158 0.00 0.00 0.00 3.85
532 539 2.138179 ACACACGCACACCCTACCT 61.138 57.895 0.00 0.00 0.00 3.08
533 540 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
534 541 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
535 542 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
538 545 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
539 546 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
540 547 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
541 548 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
542 549 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
543 550 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
544 551 0.389296 TCCCTATGAACGCACACACG 60.389 55.000 0.00 0.00 39.50 4.49
545 552 1.665679 CATCCCTATGAACGCACACAC 59.334 52.381 0.00 0.00 34.84 3.82
546 553 1.552792 TCATCCCTATGAACGCACACA 59.447 47.619 0.00 0.00 39.20 3.72
547 554 2.205074 CTCATCCCTATGAACGCACAC 58.795 52.381 0.00 0.00 41.57 3.82
548 555 1.831106 ACTCATCCCTATGAACGCACA 59.169 47.619 0.00 0.00 41.57 4.57
549 556 2.205074 CACTCATCCCTATGAACGCAC 58.795 52.381 0.00 0.00 41.57 5.34
550 557 1.831106 ACACTCATCCCTATGAACGCA 59.169 47.619 0.00 0.00 41.57 5.24
551 558 2.604046 ACACTCATCCCTATGAACGC 57.396 50.000 0.00 0.00 41.57 4.84
552 559 3.990469 GCATACACTCATCCCTATGAACG 59.010 47.826 0.00 0.00 41.57 3.95
553 560 3.990469 CGCATACACTCATCCCTATGAAC 59.010 47.826 0.00 0.00 41.57 3.18
554 561 3.554960 GCGCATACACTCATCCCTATGAA 60.555 47.826 0.30 0.00 41.57 2.57
555 562 2.029020 GCGCATACACTCATCCCTATGA 60.029 50.000 0.30 0.00 39.87 2.15
556 563 2.341257 GCGCATACACTCATCCCTATG 58.659 52.381 0.30 0.00 0.00 2.23
557 564 1.067565 CGCGCATACACTCATCCCTAT 60.068 52.381 8.75 0.00 0.00 2.57
558 565 0.313987 CGCGCATACACTCATCCCTA 59.686 55.000 8.75 0.00 0.00 3.53
559 566 1.068083 CGCGCATACACTCATCCCT 59.932 57.895 8.75 0.00 0.00 4.20
560 567 1.227263 ACGCGCATACACTCATCCC 60.227 57.895 5.73 0.00 0.00 3.85
561 568 0.806102 ACACGCGCATACACTCATCC 60.806 55.000 5.73 0.00 0.00 3.51
562 569 1.517276 GTACACGCGCATACACTCATC 59.483 52.381 5.73 0.00 0.00 2.92
563 570 1.135228 TGTACACGCGCATACACTCAT 60.135 47.619 16.59 0.00 0.00 2.90
564 571 0.241481 TGTACACGCGCATACACTCA 59.759 50.000 16.59 0.00 0.00 3.41
565 572 1.255342 CATGTACACGCGCATACACTC 59.745 52.381 21.26 0.06 34.24 3.51
566 573 1.135228 TCATGTACACGCGCATACACT 60.135 47.619 21.26 10.71 34.24 3.55
567 574 1.255342 CTCATGTACACGCGCATACAC 59.745 52.381 21.26 7.44 34.24 2.90
568 575 1.555477 CTCATGTACACGCGCATACA 58.445 50.000 21.14 21.14 35.82 2.29
569 576 0.229753 GCTCATGTACACGCGCATAC 59.770 55.000 5.73 9.92 0.00 2.39
570 577 1.206115 CGCTCATGTACACGCGCATA 61.206 55.000 18.77 0.00 39.11 3.14
571 578 2.516589 CGCTCATGTACACGCGCAT 61.517 57.895 18.77 0.00 39.11 4.73
572 579 3.178592 CGCTCATGTACACGCGCA 61.179 61.111 18.77 0.00 39.11 6.09
576 583 0.093535 CACAAGCGCTCATGTACACG 59.906 55.000 12.06 0.00 0.00 4.49
577 584 1.126846 GACACAAGCGCTCATGTACAC 59.873 52.381 22.37 9.99 0.00 2.90
578 585 1.000843 AGACACAAGCGCTCATGTACA 59.999 47.619 22.37 0.00 0.00 2.90
579 586 1.714794 AGACACAAGCGCTCATGTAC 58.285 50.000 22.37 15.28 0.00 2.90
580 587 3.801114 ATAGACACAAGCGCTCATGTA 57.199 42.857 22.37 11.46 0.00 2.29
581 588 2.680312 ATAGACACAAGCGCTCATGT 57.320 45.000 22.48 22.48 0.00 3.21
582 589 3.488678 CAGTATAGACACAAGCGCTCATG 59.511 47.826 12.06 15.18 0.00 3.07
583 590 3.381590 TCAGTATAGACACAAGCGCTCAT 59.618 43.478 12.06 0.00 0.00 2.90
584 591 2.752903 TCAGTATAGACACAAGCGCTCA 59.247 45.455 12.06 0.00 0.00 4.26
585 592 3.422417 TCAGTATAGACACAAGCGCTC 57.578 47.619 12.06 0.00 0.00 5.03
586 593 3.711086 CATCAGTATAGACACAAGCGCT 58.289 45.455 2.64 2.64 0.00 5.92
587 594 2.219674 GCATCAGTATAGACACAAGCGC 59.780 50.000 0.00 0.00 0.00 5.92
588 595 3.711086 AGCATCAGTATAGACACAAGCG 58.289 45.455 0.00 0.00 0.00 4.68
589 596 7.539712 TTTTAGCATCAGTATAGACACAAGC 57.460 36.000 0.00 0.00 0.00 4.01
614 621 6.016943 TCGGAAATTTCATCGTAGTGGTTTTT 60.017 34.615 19.49 0.00 0.00 1.94
615 622 5.470777 TCGGAAATTTCATCGTAGTGGTTTT 59.529 36.000 19.49 0.00 0.00 2.43
616 623 4.998672 TCGGAAATTTCATCGTAGTGGTTT 59.001 37.500 19.49 0.00 0.00 3.27
625 632 5.320723 TGAAAATCGTCGGAAATTTCATCG 58.679 37.500 19.49 17.92 37.25 3.84
675 682 5.621193 TCAGACTTCTTTTTCGGAGGAATT 58.379 37.500 0.00 0.00 30.88 2.17
708 715 4.128925 TCCAATCGTTCAGATGAAGAGG 57.871 45.455 0.00 0.00 40.02 3.69
712 719 4.162131 TCCTGATCCAATCGTTCAGATGAA 59.838 41.667 0.90 0.00 39.69 2.57
714 721 4.063998 TCCTGATCCAATCGTTCAGATG 57.936 45.455 0.90 0.00 39.69 2.90
839 846 1.798813 GATCGGTTGGAATATGCCGTC 59.201 52.381 0.00 0.00 44.07 4.79
916 923 5.637104 ACACGCGACAAGATTATACAATC 57.363 39.130 15.93 0.00 40.85 2.67
917 924 6.091577 TGAAACACGCGACAAGATTATACAAT 59.908 34.615 15.93 0.00 0.00 2.71
919 926 4.924462 TGAAACACGCGACAAGATTATACA 59.076 37.500 15.93 0.00 0.00 2.29
920 927 5.444586 TGAAACACGCGACAAGATTATAC 57.555 39.130 15.93 0.00 0.00 1.47
926 958 1.859383 TCATGAAACACGCGACAAGA 58.141 45.000 15.93 4.59 0.00 3.02
940 972 5.921976 ACGACGTTATGTAACAACTTCATGA 59.078 36.000 0.00 0.00 35.99 3.07
1008 1071 6.074088 CGAGCTTCATCTTCGCATATTAACTT 60.074 38.462 0.00 0.00 0.00 2.66
1013 1076 3.722147 ACGAGCTTCATCTTCGCATATT 58.278 40.909 0.00 0.00 0.00 1.28
1014 1077 3.377346 ACGAGCTTCATCTTCGCATAT 57.623 42.857 0.00 0.00 0.00 1.78
1015 1078 2.860136 CAACGAGCTTCATCTTCGCATA 59.140 45.455 0.00 0.00 0.00 3.14
1016 1079 1.662629 CAACGAGCTTCATCTTCGCAT 59.337 47.619 0.00 0.00 0.00 4.73
1017 1080 1.070821 CAACGAGCTTCATCTTCGCA 58.929 50.000 0.00 0.00 0.00 5.10
1018 1081 1.071605 ACAACGAGCTTCATCTTCGC 58.928 50.000 0.00 0.00 0.00 4.70
1019 1082 1.201855 GCACAACGAGCTTCATCTTCG 60.202 52.381 0.00 0.00 0.00 3.79
1041 1107 2.761304 AAAGCAGGAGCAGGGCTGAC 62.761 60.000 0.00 0.00 45.49 3.51
1044 1110 2.195692 GAGAAAGCAGGAGCAGGGCT 62.196 60.000 0.00 0.00 45.49 5.19
1532 1645 1.608717 AACTCGATGCTCTTCCCGCT 61.609 55.000 0.00 0.00 0.00 5.52
1638 1751 2.748058 GATGCCGGTGAGGTTGTGGT 62.748 60.000 1.90 0.00 43.70 4.16
1826 1939 1.202582 CGGACAGTCGATGAGGTTCTT 59.797 52.381 0.00 0.00 0.00 2.52
2004 2127 4.039245 AGGTACATCCATCACGTAATCCAG 59.961 45.833 0.00 0.00 39.02 3.86
2069 2192 1.519455 CGTCGATGCCCAGAACTCC 60.519 63.158 0.00 0.00 0.00 3.85
2119 2242 7.362920 GCAAGATTAAAGTCTTTATTGGCCTGA 60.363 37.037 3.32 0.00 36.33 3.86
2120 2243 6.753744 GCAAGATTAAAGTCTTTATTGGCCTG 59.246 38.462 3.32 7.05 36.33 4.85
2121 2244 6.127338 GGCAAGATTAAAGTCTTTATTGGCCT 60.127 38.462 21.73 8.47 38.37 5.19
2165 2289 8.601845 TTCATCTTTTGACTTCGTTCAGAATA 57.398 30.769 0.00 0.00 38.34 1.75
2175 2299 8.345565 ACATACTGTGTTTCATCTTTTGACTTC 58.654 33.333 0.00 0.00 38.01 3.01
2252 2376 0.889186 GACACGCACCAATCCCAACT 60.889 55.000 0.00 0.00 0.00 3.16
2253 2377 0.889186 AGACACGCACCAATCCCAAC 60.889 55.000 0.00 0.00 0.00 3.77
2255 2379 0.605319 GAAGACACGCACCAATCCCA 60.605 55.000 0.00 0.00 0.00 4.37
2256 2380 0.321653 AGAAGACACGCACCAATCCC 60.322 55.000 0.00 0.00 0.00 3.85
2258 2382 1.126846 CGAAGAAGACACGCACCAATC 59.873 52.381 0.00 0.00 0.00 2.67
2259 2383 1.148310 CGAAGAAGACACGCACCAAT 58.852 50.000 0.00 0.00 0.00 3.16
2261 2385 0.179094 AACGAAGAAGACACGCACCA 60.179 50.000 0.00 0.00 0.00 4.17
2262 2386 0.232303 CAACGAAGAAGACACGCACC 59.768 55.000 0.00 0.00 0.00 5.01
2264 2388 0.179094 ACCAACGAAGAAGACACGCA 60.179 50.000 0.00 0.00 0.00 5.24
2265 2389 0.935196 AACCAACGAAGAAGACACGC 59.065 50.000 0.00 0.00 0.00 5.34
2266 2390 1.260561 CCAACCAACGAAGAAGACACG 59.739 52.381 0.00 0.00 0.00 4.49
2267 2391 1.602377 CCCAACCAACGAAGAAGACAC 59.398 52.381 0.00 0.00 0.00 3.67
2270 2394 0.841289 ACCCCAACCAACGAAGAAGA 59.159 50.000 0.00 0.00 0.00 2.87
2272 2396 2.438763 TCTTACCCCAACCAACGAAGAA 59.561 45.455 0.00 0.00 0.00 2.52
2273 2397 2.038033 CTCTTACCCCAACCAACGAAGA 59.962 50.000 0.00 0.00 0.00 2.87
2274 2398 2.423577 CTCTTACCCCAACCAACGAAG 58.576 52.381 0.00 0.00 0.00 3.79
2277 2401 0.250553 TGCTCTTACCCCAACCAACG 60.251 55.000 0.00 0.00 0.00 4.10
2278 2402 2.092323 GATGCTCTTACCCCAACCAAC 58.908 52.381 0.00 0.00 0.00 3.77
2279 2403 1.992557 AGATGCTCTTACCCCAACCAA 59.007 47.619 0.00 0.00 0.00 3.67
2280 2404 1.668826 AGATGCTCTTACCCCAACCA 58.331 50.000 0.00 0.00 0.00 3.67
2281 2405 4.563786 GCTATAGATGCTCTTACCCCAACC 60.564 50.000 3.21 0.00 0.00 3.77
2282 2406 4.563786 GGCTATAGATGCTCTTACCCCAAC 60.564 50.000 3.21 0.00 0.00 3.77
2283 2407 3.583086 GGCTATAGATGCTCTTACCCCAA 59.417 47.826 3.21 0.00 0.00 4.12
2284 2408 3.173965 GGCTATAGATGCTCTTACCCCA 58.826 50.000 3.21 0.00 0.00 4.96
2285 2409 2.166664 CGGCTATAGATGCTCTTACCCC 59.833 54.545 3.21 0.00 0.00 4.95
2286 2410 2.166664 CCGGCTATAGATGCTCTTACCC 59.833 54.545 3.21 0.00 0.00 3.69
2287 2411 3.090037 TCCGGCTATAGATGCTCTTACC 58.910 50.000 3.21 0.00 0.00 2.85
2288 2412 4.993029 ATCCGGCTATAGATGCTCTTAC 57.007 45.455 3.21 0.00 0.00 2.34
2289 2413 6.360370 AAAATCCGGCTATAGATGCTCTTA 57.640 37.500 3.21 0.00 0.00 2.10
2290 2414 4.899352 AAATCCGGCTATAGATGCTCTT 57.101 40.909 3.21 0.00 0.00 2.85
2291 2415 4.899352 AAAATCCGGCTATAGATGCTCT 57.101 40.909 3.21 0.00 0.00 4.09
2292 2416 5.725362 ACTAAAATCCGGCTATAGATGCTC 58.275 41.667 3.21 0.00 0.00 4.26
2560 2950 0.852777 CAACATTATCCCGAGACGCG 59.147 55.000 3.53 3.53 40.47 6.01
2561 2951 1.202486 TCCAACATTATCCCGAGACGC 60.202 52.381 0.00 0.00 0.00 5.19
2562 2952 2.470821 GTCCAACATTATCCCGAGACG 58.529 52.381 0.00 0.00 0.00 4.18
2563 2953 2.470821 CGTCCAACATTATCCCGAGAC 58.529 52.381 0.00 0.00 0.00 3.36
2564 2954 1.411246 CCGTCCAACATTATCCCGAGA 59.589 52.381 0.00 0.00 0.00 4.04
2565 2955 1.865865 CCGTCCAACATTATCCCGAG 58.134 55.000 0.00 0.00 0.00 4.63
2566 2956 0.179067 GCCGTCCAACATTATCCCGA 60.179 55.000 0.00 0.00 0.00 5.14
2567 2957 0.179056 AGCCGTCCAACATTATCCCG 60.179 55.000 0.00 0.00 0.00 5.14
2568 2958 1.594331 GAGCCGTCCAACATTATCCC 58.406 55.000 0.00 0.00 0.00 3.85
2578 2968 0.824109 CACTTATGAGGAGCCGTCCA 59.176 55.000 0.00 0.00 46.80 4.02
2584 2974 2.093235 AGGTTGAGCACTTATGAGGAGC 60.093 50.000 0.00 0.00 0.00 4.70
2586 2976 3.307691 CCAAGGTTGAGCACTTATGAGGA 60.308 47.826 0.00 0.00 0.00 3.71
2638 3028 1.269778 ACATCCGTATGCCGACATGAG 60.270 52.381 0.00 0.00 39.56 2.90
2644 3034 1.023502 TCGTTACATCCGTATGCCGA 58.976 50.000 0.00 0.00 39.56 5.54
2649 3040 4.418392 GACACTTGTCGTTACATCCGTAT 58.582 43.478 0.00 0.00 34.97 3.06
2710 3101 4.033709 ACTACAGGACTAGTCATGGCATT 58.966 43.478 33.67 19.47 44.76 3.56
2763 5109 1.092921 TCTGCAAACGACACCACCAC 61.093 55.000 0.00 0.00 0.00 4.16
2800 5146 3.774959 CTCGCGCCGTCCTAGCAAT 62.775 63.158 0.00 0.00 0.00 3.56
2828 5176 0.749454 AGAAAGGGCATCGGCATGAC 60.749 55.000 0.00 0.00 43.71 3.06
2913 5261 7.172868 AGCACCACAAATTGAATTCATCATA 57.827 32.000 9.40 0.00 38.03 2.15
2942 5291 4.892934 CAGAGCTCAGAATCTAGGGTACTT 59.107 45.833 17.77 0.00 0.00 2.24
2951 5300 1.202330 CACCCCAGAGCTCAGAATCT 58.798 55.000 17.77 0.00 0.00 2.40
2953 5302 1.661463 TTCACCCCAGAGCTCAGAAT 58.339 50.000 17.77 0.00 0.00 2.40
2956 5305 2.420687 GGTTATTCACCCCAGAGCTCAG 60.421 54.545 17.77 8.01 40.19 3.35
3021 5384 1.348538 TTCAGCATGGTAACGACGCG 61.349 55.000 3.53 3.53 42.51 6.01
3041 5404 7.070447 TGCTTTGGTTATAAAATATGATGGGCA 59.930 33.333 0.00 0.00 0.00 5.36
3054 5417 9.429359 CAACATGGTAATTTGCTTTGGTTATAA 57.571 29.630 0.00 0.00 0.00 0.98
3055 5418 8.589338 ACAACATGGTAATTTGCTTTGGTTATA 58.411 29.630 0.00 0.00 0.00 0.98
3056 5419 7.449247 ACAACATGGTAATTTGCTTTGGTTAT 58.551 30.769 0.00 0.00 0.00 1.89
3057 5420 6.821388 ACAACATGGTAATTTGCTTTGGTTA 58.179 32.000 0.00 0.00 0.00 2.85
3058 5421 5.679601 ACAACATGGTAATTTGCTTTGGTT 58.320 33.333 0.00 0.00 0.00 3.67
3059 5422 5.289083 ACAACATGGTAATTTGCTTTGGT 57.711 34.783 0.00 0.00 0.00 3.67
3060 5423 7.903995 ATAACAACATGGTAATTTGCTTTGG 57.096 32.000 0.00 0.00 0.00 3.28
3061 5424 8.986847 TGAATAACAACATGGTAATTTGCTTTG 58.013 29.630 0.00 0.00 0.00 2.77
3062 5425 9.723601 ATGAATAACAACATGGTAATTTGCTTT 57.276 25.926 0.00 0.00 0.00 3.51
3063 5426 9.723601 AATGAATAACAACATGGTAATTTGCTT 57.276 25.926 0.00 0.00 0.00 3.91
3064 5427 9.153721 CAATGAATAACAACATGGTAATTTGCT 57.846 29.630 0.00 0.00 0.00 3.91
3065 5428 8.934825 ACAATGAATAACAACATGGTAATTTGC 58.065 29.630 0.00 0.00 30.10 3.68
3072 5435 9.823647 TTTTGTAACAATGAATAACAACATGGT 57.176 25.926 0.00 0.00 32.80 3.55
3078 5441 9.959749 GGAGTCTTTTGTAACAATGAATAACAA 57.040 29.630 0.00 0.00 0.00 2.83
3079 5442 8.573035 GGGAGTCTTTTGTAACAATGAATAACA 58.427 33.333 0.00 0.00 0.00 2.41
3080 5443 8.573035 TGGGAGTCTTTTGTAACAATGAATAAC 58.427 33.333 0.00 0.00 0.00 1.89
3081 5444 8.698973 TGGGAGTCTTTTGTAACAATGAATAA 57.301 30.769 0.00 0.00 0.00 1.40
3082 5445 8.698973 TTGGGAGTCTTTTGTAACAATGAATA 57.301 30.769 0.00 0.00 0.00 1.75
3083 5446 7.595819 TTGGGAGTCTTTTGTAACAATGAAT 57.404 32.000 0.00 0.00 0.00 2.57
3084 5447 7.411486 TTTGGGAGTCTTTTGTAACAATGAA 57.589 32.000 0.00 0.00 0.00 2.57
3085 5448 7.411486 TTTTGGGAGTCTTTTGTAACAATGA 57.589 32.000 0.00 0.00 0.00 2.57
3086 5449 9.757227 TTATTTTGGGAGTCTTTTGTAACAATG 57.243 29.630 0.00 0.00 0.00 2.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.