Multiple sequence alignment - TraesCS2B01G182700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G182700 | chr2B | 100.000 | 7026 | 0 | 0 | 1 | 7026 | 157645811 | 157638786 | 0.000000e+00 | 12975.0 |
1 | TraesCS2B01G182700 | chr2B | 88.947 | 190 | 15 | 5 | 6405 | 6594 | 23790343 | 23790526 | 5.480000e-56 | 230.0 |
2 | TraesCS2B01G182700 | chr2B | 89.412 | 85 | 9 | 0 | 6320 | 6404 | 764502102 | 764502018 | 2.680000e-19 | 108.0 |
3 | TraesCS2B01G182700 | chr2A | 95.736 | 3307 | 105 | 18 | 2932 | 6222 | 103731659 | 103728373 | 0.000000e+00 | 5293.0 |
4 | TraesCS2B01G182700 | chr2A | 90.492 | 2093 | 85 | 36 | 1 | 2040 | 103734585 | 103732554 | 0.000000e+00 | 2658.0 |
5 | TraesCS2B01G182700 | chr2A | 88.757 | 1681 | 156 | 24 | 4459 | 6116 | 103813000 | 103811330 | 0.000000e+00 | 2026.0 |
6 | TraesCS2B01G182700 | chr2A | 88.228 | 841 | 44 | 15 | 2047 | 2873 | 103732470 | 103731671 | 0.000000e+00 | 953.0 |
7 | TraesCS2B01G182700 | chr2A | 90.300 | 433 | 31 | 7 | 1169 | 1600 | 103818385 | 103817963 | 2.210000e-154 | 556.0 |
8 | TraesCS2B01G182700 | chr2A | 88.248 | 451 | 41 | 7 | 3871 | 4311 | 103813492 | 103813044 | 4.830000e-146 | 529.0 |
9 | TraesCS2B01G182700 | chr2D | 91.226 | 3385 | 141 | 59 | 1 | 3318 | 107407221 | 107403926 | 0.000000e+00 | 4462.0 |
10 | TraesCS2B01G182700 | chr2D | 96.618 | 1981 | 47 | 9 | 4343 | 6312 | 107402871 | 107400900 | 0.000000e+00 | 3269.0 |
11 | TraesCS2B01G182700 | chr2D | 85.965 | 2280 | 234 | 45 | 3879 | 6120 | 107463113 | 107460882 | 0.000000e+00 | 2359.0 |
12 | TraesCS2B01G182700 | chr2D | 96.612 | 974 | 31 | 2 | 3371 | 4342 | 107403928 | 107402955 | 0.000000e+00 | 1615.0 |
13 | TraesCS2B01G182700 | chr2D | 89.182 | 379 | 37 | 2 | 6569 | 6947 | 421479831 | 421479457 | 2.970000e-128 | 470.0 |
14 | TraesCS2B01G182700 | chr2D | 94.253 | 174 | 6 | 3 | 6399 | 6572 | 161907021 | 161906852 | 5.400000e-66 | 263.0 |
15 | TraesCS2B01G182700 | chr2D | 92.818 | 181 | 9 | 3 | 6392 | 6572 | 426427977 | 426427801 | 6.990000e-65 | 259.0 |
16 | TraesCS2B01G182700 | chr2D | 91.429 | 175 | 12 | 2 | 6398 | 6572 | 457643999 | 457644170 | 3.280000e-58 | 237.0 |
17 | TraesCS2B01G182700 | chr2D | 97.647 | 85 | 1 | 1 | 6942 | 7025 | 178275939 | 178276023 | 2.040000e-30 | 145.0 |
18 | TraesCS2B01G182700 | chr6B | 92.325 | 456 | 33 | 2 | 6569 | 7023 | 646266502 | 646266956 | 0.000000e+00 | 647.0 |
19 | TraesCS2B01G182700 | chr6B | 88.976 | 381 | 35 | 5 | 6572 | 6947 | 345631915 | 345632293 | 1.380000e-126 | 464.0 |
20 | TraesCS2B01G182700 | chr6B | 94.340 | 53 | 3 | 0 | 6320 | 6372 | 646266432 | 646266484 | 1.620000e-11 | 82.4 |
21 | TraesCS2B01G182700 | chr6D | 95.000 | 380 | 17 | 2 | 6569 | 6947 | 412058317 | 412058695 | 4.690000e-166 | 595.0 |
22 | TraesCS2B01G182700 | chr6D | 93.158 | 380 | 23 | 3 | 6569 | 6947 | 437781344 | 437780967 | 7.960000e-154 | 555.0 |
23 | TraesCS2B01G182700 | chr6D | 93.296 | 179 | 8 | 3 | 6398 | 6576 | 392896968 | 392897142 | 1.940000e-65 | 261.0 |
24 | TraesCS2B01G182700 | chr6D | 96.471 | 85 | 2 | 1 | 6942 | 7025 | 412058885 | 412058969 | 9.500000e-29 | 139.0 |
25 | TraesCS2B01G182700 | chr6D | 96.471 | 85 | 2 | 1 | 6942 | 7025 | 437780777 | 437780693 | 9.500000e-29 | 139.0 |
26 | TraesCS2B01G182700 | chr6D | 92.222 | 90 | 7 | 0 | 6320 | 6409 | 437781427 | 437781338 | 2.060000e-25 | 128.0 |
27 | TraesCS2B01G182700 | chr3D | 92.612 | 379 | 25 | 3 | 6569 | 6947 | 441425357 | 441424982 | 6.200000e-150 | 542.0 |
28 | TraesCS2B01G182700 | chr3D | 89.447 | 199 | 12 | 8 | 6405 | 6600 | 611185657 | 611185849 | 7.040000e-60 | 243.0 |
29 | TraesCS2B01G182700 | chr3D | 97.647 | 85 | 1 | 1 | 6942 | 7025 | 441424660 | 441424576 | 2.040000e-30 | 145.0 |
30 | TraesCS2B01G182700 | chr3D | 97.647 | 85 | 1 | 1 | 6942 | 7025 | 441424792 | 441424708 | 2.040000e-30 | 145.0 |
31 | TraesCS2B01G182700 | chr3D | 90.000 | 90 | 9 | 0 | 6320 | 6409 | 441425440 | 441425351 | 4.450000e-22 | 117.0 |
32 | TraesCS2B01G182700 | chr1D | 92.084 | 379 | 29 | 1 | 6569 | 6947 | 10585303 | 10584926 | 3.730000e-147 | 532.0 |
33 | TraesCS2B01G182700 | chr1D | 94.286 | 175 | 6 | 3 | 6401 | 6575 | 178466473 | 178466303 | 1.500000e-66 | 265.0 |
34 | TraesCS2B01G182700 | chr1D | 92.350 | 183 | 10 | 3 | 6397 | 6579 | 206955708 | 206955530 | 2.510000e-64 | 257.0 |
35 | TraesCS2B01G182700 | chr1D | 89.474 | 190 | 13 | 6 | 6405 | 6594 | 330535131 | 330534949 | 4.240000e-57 | 233.0 |
36 | TraesCS2B01G182700 | chr1D | 97.647 | 85 | 1 | 1 | 6942 | 7025 | 10584736 | 10584652 | 2.040000e-30 | 145.0 |
37 | TraesCS2B01G182700 | chr5B | 91.293 | 379 | 31 | 2 | 6569 | 6947 | 289561635 | 289561259 | 3.760000e-142 | 516.0 |
38 | TraesCS2B01G182700 | chr5B | 93.785 | 177 | 8 | 2 | 6402 | 6578 | 93472098 | 93472271 | 5.400000e-66 | 263.0 |
39 | TraesCS2B01G182700 | chr5B | 88.235 | 204 | 16 | 6 | 6405 | 6607 | 162728589 | 162728393 | 3.280000e-58 | 237.0 |
40 | TraesCS2B01G182700 | chr5B | 89.011 | 91 | 9 | 1 | 6319 | 6409 | 289561718 | 289561629 | 2.070000e-20 | 111.0 |
41 | TraesCS2B01G182700 | chr5D | 90.501 | 379 | 35 | 1 | 6569 | 6947 | 379391266 | 379390889 | 3.780000e-137 | 499.0 |
42 | TraesCS2B01G182700 | chr4A | 93.785 | 177 | 7 | 3 | 6400 | 6576 | 357678601 | 357678773 | 5.400000e-66 | 263.0 |
43 | TraesCS2B01G182700 | chr4A | 89.000 | 200 | 14 | 7 | 6398 | 6594 | 688599432 | 688599626 | 2.530000e-59 | 241.0 |
44 | TraesCS2B01G182700 | chr3A | 94.253 | 174 | 7 | 2 | 6401 | 6574 | 744441342 | 744441172 | 5.400000e-66 | 263.0 |
45 | TraesCS2B01G182700 | chr4D | 93.750 | 176 | 7 | 3 | 6401 | 6576 | 75782220 | 75782049 | 1.940000e-65 | 261.0 |
46 | TraesCS2B01G182700 | chr3B | 90.426 | 188 | 11 | 6 | 6405 | 6591 | 166002272 | 166002453 | 2.530000e-59 | 241.0 |
47 | TraesCS2B01G182700 | chr4B | 89.005 | 191 | 15 | 5 | 6404 | 6594 | 395819381 | 395819197 | 1.520000e-56 | 231.0 |
48 | TraesCS2B01G182700 | chr4B | 96.471 | 85 | 2 | 1 | 6942 | 7025 | 437159858 | 437159942 | 9.500000e-29 | 139.0 |
49 | TraesCS2B01G182700 | chr5A | 91.667 | 168 | 11 | 2 | 6405 | 6572 | 110665250 | 110665414 | 5.480000e-56 | 230.0 |
50 | TraesCS2B01G182700 | chr7D | 96.471 | 85 | 2 | 1 | 6942 | 7025 | 19212033 | 19211949 | 9.500000e-29 | 139.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G182700 | chr2B | 157638786 | 157645811 | 7025 | True | 12975.000000 | 12975 | 100.000000 | 1 | 7026 | 1 | chr2B.!!$R1 | 7025 |
1 | TraesCS2B01G182700 | chr2A | 103728373 | 103734585 | 6212 | True | 2968.000000 | 5293 | 91.485333 | 1 | 6222 | 3 | chr2A.!!$R2 | 6221 |
2 | TraesCS2B01G182700 | chr2A | 103811330 | 103813492 | 2162 | True | 1277.500000 | 2026 | 88.502500 | 3871 | 6116 | 2 | chr2A.!!$R3 | 2245 |
3 | TraesCS2B01G182700 | chr2D | 107400900 | 107407221 | 6321 | True | 3115.333333 | 4462 | 94.818667 | 1 | 6312 | 3 | chr2D.!!$R5 | 6311 |
4 | TraesCS2B01G182700 | chr2D | 107460882 | 107463113 | 2231 | True | 2359.000000 | 2359 | 85.965000 | 3879 | 6120 | 1 | chr2D.!!$R1 | 2241 |
5 | TraesCS2B01G182700 | chr6B | 646266432 | 646266956 | 524 | False | 364.700000 | 647 | 93.332500 | 6320 | 7023 | 2 | chr6B.!!$F2 | 703 |
6 | TraesCS2B01G182700 | chr6D | 412058317 | 412058969 | 652 | False | 367.000000 | 595 | 95.735500 | 6569 | 7025 | 2 | chr6D.!!$F2 | 456 |
7 | TraesCS2B01G182700 | chr6D | 437780693 | 437781427 | 734 | True | 274.000000 | 555 | 93.950333 | 6320 | 7025 | 3 | chr6D.!!$R1 | 705 |
8 | TraesCS2B01G182700 | chr3D | 441424576 | 441425440 | 864 | True | 237.250000 | 542 | 94.476500 | 6320 | 7025 | 4 | chr3D.!!$R1 | 705 |
9 | TraesCS2B01G182700 | chr1D | 10584652 | 10585303 | 651 | True | 338.500000 | 532 | 94.865500 | 6569 | 7025 | 2 | chr1D.!!$R4 | 456 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
979 | 1032 | 0.988063 | AACTCTTCTTCTCTGCCCCC | 59.012 | 55.0 | 0.00 | 0.00 | 0.00 | 5.40 | F |
2322 | 2491 | 0.171231 | TCAACGTCTGGCATCGAGAG | 59.829 | 55.0 | 16.62 | 7.66 | 0.00 | 3.20 | F |
2469 | 2638 | 0.331616 | AAGTATGTGGGCCCCAACTC | 59.668 | 55.0 | 22.27 | 7.32 | 34.18 | 3.01 | F |
3513 | 3694 | 1.051556 | GGGTGGCCTCCCAAACAAAA | 61.052 | 55.0 | 33.75 | 0.00 | 44.33 | 2.44 | F |
4416 | 4700 | 2.231721 | ACTAAGGCGAGAAAGTCAGGAC | 59.768 | 50.0 | 0.00 | 0.00 | 0.00 | 3.85 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2727 | 2896 | 0.034186 | TGTCCAATGGTCTCCATGGC | 60.034 | 55.000 | 6.96 | 0.00 | 44.40 | 4.40 | R |
3460 | 3641 | 0.098728 | GGTACATGTGCACGCCAATC | 59.901 | 55.000 | 16.11 | 0.94 | 0.00 | 2.67 | R |
4347 | 4631 | 1.210478 | CGAATGAGGTCAGGGAATGGT | 59.790 | 52.381 | 0.00 | 0.00 | 0.00 | 3.55 | R |
4864 | 5151 | 1.143277 | TCCAGCGGTTCCTTGGTTTAA | 59.857 | 47.619 | 8.39 | 0.00 | 33.65 | 1.52 | R |
6274 | 6587 | 0.461870 | GCTCCACAGACACACACACA | 60.462 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
31 | 32 | 1.814793 | TTTAAGGTGCGTGCTATGCA | 58.185 | 45.000 | 0.00 | 0.00 | 37.87 | 3.96 |
85 | 86 | 1.437573 | CGGCAGCCGTTAGATCTGA | 59.562 | 57.895 | 26.69 | 0.00 | 42.73 | 3.27 |
144 | 169 | 6.922957 | TGCAGAAACCTTTTTCAACATATGTC | 59.077 | 34.615 | 9.23 | 0.00 | 43.29 | 3.06 |
378 | 406 | 6.072175 | TGCGGAAGAAATTTTTACAGCATAGT | 60.072 | 34.615 | 10.86 | 0.00 | 0.00 | 2.12 |
445 | 473 | 4.944619 | TTGCAATATGGGTGTTGTTGAA | 57.055 | 36.364 | 0.00 | 0.00 | 0.00 | 2.69 |
452 | 480 | 7.605449 | CAATATGGGTGTTGTTGAAGAAGAAT | 58.395 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
478 | 506 | 1.562942 | ACAGCACAGATGATGGTCCAT | 59.437 | 47.619 | 3.26 | 3.26 | 46.89 | 3.41 |
490 | 518 | 5.735285 | TGATGGTCCATAAAACAAATGCA | 57.265 | 34.783 | 3.72 | 0.00 | 0.00 | 3.96 |
492 | 521 | 5.245751 | TGATGGTCCATAAAACAAATGCAGT | 59.754 | 36.000 | 3.72 | 0.00 | 0.00 | 4.40 |
538 | 568 | 1.686052 | ACATGGACGTTGTTGCCAAAT | 59.314 | 42.857 | 0.00 | 0.00 | 34.95 | 2.32 |
542 | 572 | 4.592485 | TGGACGTTGTTGCCAAATAAAT | 57.408 | 36.364 | 0.00 | 0.00 | 30.94 | 1.40 |
599 | 634 | 3.205815 | TTGGCAGAAACAGGCAAGT | 57.794 | 47.368 | 0.00 | 0.00 | 45.10 | 3.16 |
612 | 647 | 2.096218 | CAGGCAAGTAAAGACAAGCGTC | 60.096 | 50.000 | 0.00 | 0.00 | 42.95 | 5.19 |
638 | 673 | 4.194720 | GAGGCAGCGGACGATCGT | 62.195 | 66.667 | 22.97 | 22.97 | 0.00 | 3.73 |
651 | 688 | 2.202932 | ATCGTGTGATCCGCCAGC | 60.203 | 61.111 | 0.00 | 0.00 | 0.00 | 4.85 |
678 | 715 | 3.367025 | ACGAAGCGTTTCCGATCTTTTAG | 59.633 | 43.478 | 6.41 | 0.00 | 36.35 | 1.85 |
679 | 716 | 3.241995 | CGAAGCGTTTCCGATCTTTTAGG | 60.242 | 47.826 | 6.41 | 0.00 | 35.63 | 2.69 |
745 | 782 | 4.394920 | CACGACCCAAATGCTATGTTTACT | 59.605 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
750 | 787 | 6.924111 | ACCCAAATGCTATGTTTACTCAAAG | 58.076 | 36.000 | 0.00 | 0.00 | 0.00 | 2.77 |
974 | 1027 | 2.985809 | CAGTCGCAACTCTTCTTCTCTG | 59.014 | 50.000 | 0.00 | 0.00 | 31.71 | 3.35 |
978 | 1031 | 1.948144 | GCAACTCTTCTTCTCTGCCCC | 60.948 | 57.143 | 0.00 | 0.00 | 0.00 | 5.80 |
979 | 1032 | 0.988063 | AACTCTTCTTCTCTGCCCCC | 59.012 | 55.000 | 0.00 | 0.00 | 0.00 | 5.40 |
980 | 1033 | 1.261238 | ACTCTTCTTCTCTGCCCCCG | 61.261 | 60.000 | 0.00 | 0.00 | 0.00 | 5.73 |
981 | 1034 | 2.124942 | CTTCTTCTCTGCCCCCGC | 60.125 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
982 | 1035 | 3.689002 | CTTCTTCTCTGCCCCCGCC | 62.689 | 68.421 | 0.00 | 0.00 | 0.00 | 6.13 |
1271 | 1339 | 0.460109 | CATCTCGTGGTTCATCGGCA | 60.460 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
1405 | 1473 | 3.127533 | GTCTGGGCGTGCATGGTC | 61.128 | 66.667 | 8.27 | 0.00 | 0.00 | 4.02 |
1600 | 1668 | 2.306805 | TGAGCTGGAGGTGATCACAATT | 59.693 | 45.455 | 26.47 | 11.87 | 0.00 | 2.32 |
1602 | 1670 | 3.350833 | AGCTGGAGGTGATCACAATTTC | 58.649 | 45.455 | 26.47 | 16.65 | 0.00 | 2.17 |
1612 | 1680 | 7.410174 | AGGTGATCACAATTTCTTACCCATTA | 58.590 | 34.615 | 26.47 | 0.00 | 0.00 | 1.90 |
1706 | 1781 | 3.541632 | TCTCTTTGTTCTTTTGCGAGGT | 58.458 | 40.909 | 0.00 | 0.00 | 0.00 | 3.85 |
1918 | 1995 | 6.887376 | TTTCATTCTGCTGAACGATACTAC | 57.113 | 37.500 | 8.32 | 0.00 | 34.96 | 2.73 |
1919 | 1996 | 5.836821 | TCATTCTGCTGAACGATACTACT | 57.163 | 39.130 | 8.32 | 0.00 | 34.71 | 2.57 |
1920 | 1997 | 6.937436 | TCATTCTGCTGAACGATACTACTA | 57.063 | 37.500 | 8.32 | 0.00 | 34.71 | 1.82 |
1921 | 1998 | 7.511959 | TCATTCTGCTGAACGATACTACTAT | 57.488 | 36.000 | 8.32 | 0.00 | 34.71 | 2.12 |
1922 | 1999 | 7.941919 | TCATTCTGCTGAACGATACTACTATT | 58.058 | 34.615 | 8.32 | 0.00 | 34.71 | 1.73 |
1923 | 2000 | 9.063615 | TCATTCTGCTGAACGATACTACTATTA | 57.936 | 33.333 | 8.32 | 0.00 | 34.71 | 0.98 |
1951 | 2028 | 2.189521 | CACGACTGCCCCCATACC | 59.810 | 66.667 | 0.00 | 0.00 | 0.00 | 2.73 |
1955 | 2032 | 3.096495 | ACTGCCCCCATACCGCAT | 61.096 | 61.111 | 0.00 | 0.00 | 0.00 | 4.73 |
1956 | 2033 | 2.195683 | CTGCCCCCATACCGCATT | 59.804 | 61.111 | 0.00 | 0.00 | 0.00 | 3.56 |
1957 | 2034 | 1.349542 | ACTGCCCCCATACCGCATTA | 61.350 | 55.000 | 0.00 | 0.00 | 0.00 | 1.90 |
1958 | 2035 | 0.889186 | CTGCCCCCATACCGCATTAC | 60.889 | 60.000 | 0.00 | 0.00 | 0.00 | 1.89 |
1959 | 2036 | 1.349542 | TGCCCCCATACCGCATTACT | 61.350 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
1960 | 2037 | 0.889186 | GCCCCCATACCGCATTACTG | 60.889 | 60.000 | 0.00 | 0.00 | 0.00 | 2.74 |
1961 | 2038 | 0.889186 | CCCCCATACCGCATTACTGC | 60.889 | 60.000 | 0.00 | 0.00 | 45.31 | 4.40 |
2020 | 2097 | 8.113462 | TGCCTATTTTATTTTAGGAGAAGTGGT | 58.887 | 33.333 | 0.22 | 0.00 | 37.74 | 4.16 |
2043 | 2203 | 5.185249 | GTGAACCTGAACACTCACCTATCTA | 59.815 | 44.000 | 0.00 | 0.00 | 33.57 | 1.98 |
2044 | 2204 | 5.419155 | TGAACCTGAACACTCACCTATCTAG | 59.581 | 44.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2045 | 2205 | 3.702045 | ACCTGAACACTCACCTATCTAGC | 59.298 | 47.826 | 0.00 | 0.00 | 0.00 | 3.42 |
2046 | 2206 | 3.957497 | CCTGAACACTCACCTATCTAGCT | 59.043 | 47.826 | 0.00 | 0.00 | 0.00 | 3.32 |
2047 | 2207 | 4.037446 | CCTGAACACTCACCTATCTAGCTC | 59.963 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
2048 | 2208 | 4.861196 | TGAACACTCACCTATCTAGCTCT | 58.139 | 43.478 | 0.00 | 0.00 | 0.00 | 4.09 |
2049 | 2209 | 6.002653 | TGAACACTCACCTATCTAGCTCTA | 57.997 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
2056 | 2216 | 9.325198 | CACTCACCTATCTAGCTCTATAGTATG | 57.675 | 40.741 | 12.07 | 10.31 | 0.00 | 2.39 |
2159 | 2326 | 8.668510 | ATCCTATTTGTGATACTACAGCAAAG | 57.331 | 34.615 | 0.00 | 0.00 | 33.42 | 2.77 |
2161 | 2329 | 8.318412 | TCCTATTTGTGATACTACAGCAAAGAA | 58.682 | 33.333 | 0.00 | 0.00 | 33.42 | 2.52 |
2176 | 2345 | 7.099120 | ACAGCAAAGAAGTCAAAAGTTTTGAT | 58.901 | 30.769 | 28.69 | 17.08 | 0.00 | 2.57 |
2234 | 2403 | 6.944096 | ACTTATTCTTAGTTAGGTGGGTGTC | 58.056 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2300 | 2469 | 3.066760 | CGGGGTTATTTGGATGAAAGCTC | 59.933 | 47.826 | 0.00 | 0.00 | 0.00 | 4.09 |
2309 | 2478 | 2.224523 | TGGATGAAAGCTCCTTCAACGT | 60.225 | 45.455 | 4.99 | 0.00 | 38.75 | 3.99 |
2310 | 2479 | 2.416893 | GGATGAAAGCTCCTTCAACGTC | 59.583 | 50.000 | 4.99 | 0.00 | 38.75 | 4.34 |
2311 | 2480 | 2.910688 | TGAAAGCTCCTTCAACGTCT | 57.089 | 45.000 | 0.00 | 0.00 | 32.39 | 4.18 |
2312 | 2481 | 2.483876 | TGAAAGCTCCTTCAACGTCTG | 58.516 | 47.619 | 0.00 | 0.00 | 32.39 | 3.51 |
2313 | 2482 | 1.801178 | GAAAGCTCCTTCAACGTCTGG | 59.199 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
2314 | 2483 | 0.603975 | AAGCTCCTTCAACGTCTGGC | 60.604 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2315 | 2484 | 1.301716 | GCTCCTTCAACGTCTGGCA | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 4.92 |
2316 | 2485 | 0.674895 | GCTCCTTCAACGTCTGGCAT | 60.675 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2317 | 2486 | 1.363744 | CTCCTTCAACGTCTGGCATC | 58.636 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2318 | 2487 | 0.389817 | TCCTTCAACGTCTGGCATCG | 60.390 | 55.000 | 9.92 | 9.92 | 0.00 | 3.84 |
2319 | 2488 | 0.389817 | CCTTCAACGTCTGGCATCGA | 60.390 | 55.000 | 16.62 | 0.00 | 0.00 | 3.59 |
2320 | 2489 | 0.994995 | CTTCAACGTCTGGCATCGAG | 59.005 | 55.000 | 16.62 | 9.84 | 0.00 | 4.04 |
2321 | 2490 | 0.601057 | TTCAACGTCTGGCATCGAGA | 59.399 | 50.000 | 16.62 | 11.52 | 0.00 | 4.04 |
2322 | 2491 | 0.171231 | TCAACGTCTGGCATCGAGAG | 59.829 | 55.000 | 16.62 | 7.66 | 0.00 | 3.20 |
2330 | 2499 | 3.242936 | GTCTGGCATCGAGAGAACTAGAC | 60.243 | 52.174 | 0.00 | 0.00 | 44.83 | 2.59 |
2331 | 2500 | 6.538919 | GTCTGGCATCGAGAGAACTAGACG | 62.539 | 54.167 | 0.00 | 0.00 | 43.45 | 4.18 |
2336 | 2505 | 3.242549 | TCGAGAGAACTAGACGTAGCA | 57.757 | 47.619 | 0.00 | 0.00 | 37.03 | 3.49 |
2337 | 2506 | 3.794717 | TCGAGAGAACTAGACGTAGCAT | 58.205 | 45.455 | 0.00 | 0.00 | 37.03 | 3.79 |
2345 | 2514 | 4.098055 | ACTAGACGTAGCATTGTCACTG | 57.902 | 45.455 | 0.00 | 0.00 | 37.58 | 3.66 |
2388 | 2557 | 2.946762 | GCAAGTTGTCACCGGAGC | 59.053 | 61.111 | 9.46 | 0.00 | 0.00 | 4.70 |
2414 | 2583 | 8.233190 | CAGGGCGAAAATGATAATTATTCTCTC | 58.767 | 37.037 | 0.00 | 0.00 | 0.00 | 3.20 |
2415 | 2584 | 7.118390 | AGGGCGAAAATGATAATTATTCTCTCG | 59.882 | 37.037 | 0.00 | 6.51 | 0.00 | 4.04 |
2416 | 2585 | 6.738649 | GGCGAAAATGATAATTATTCTCTCGC | 59.261 | 38.462 | 21.81 | 21.81 | 44.32 | 5.03 |
2417 | 2586 | 6.459831 | GCGAAAATGATAATTATTCTCTCGCG | 59.540 | 38.462 | 18.46 | 0.00 | 37.62 | 5.87 |
2469 | 2638 | 0.331616 | AAGTATGTGGGCCCCAACTC | 59.668 | 55.000 | 22.27 | 7.32 | 34.18 | 3.01 |
2529 | 2698 | 9.399797 | AGTAATGATAATGATGCAAGTGAGAAA | 57.600 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
2542 | 2711 | 5.277974 | GCAAGTGAGAAATTGTAACAGCTCA | 60.278 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2585 | 2754 | 4.158394 | TCAGTCCAATTGCCAGAAAATAGC | 59.842 | 41.667 | 0.00 | 0.00 | 0.00 | 2.97 |
2587 | 2756 | 2.159254 | TCCAATTGCCAGAAAATAGCGC | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 5.92 |
2588 | 2757 | 2.159198 | CCAATTGCCAGAAAATAGCGCT | 60.159 | 45.455 | 17.26 | 17.26 | 0.00 | 5.92 |
2589 | 2758 | 3.514645 | CAATTGCCAGAAAATAGCGCTT | 58.485 | 40.909 | 18.68 | 0.00 | 0.00 | 4.68 |
2590 | 2759 | 2.919666 | TTGCCAGAAAATAGCGCTTC | 57.080 | 45.000 | 18.68 | 7.05 | 0.00 | 3.86 |
2591 | 2760 | 1.094785 | TGCCAGAAAATAGCGCTTCC | 58.905 | 50.000 | 18.68 | 0.14 | 0.00 | 3.46 |
2592 | 2761 | 1.340017 | TGCCAGAAAATAGCGCTTCCT | 60.340 | 47.619 | 18.68 | 2.83 | 0.00 | 3.36 |
2593 | 2762 | 1.064654 | GCCAGAAAATAGCGCTTCCTG | 59.935 | 52.381 | 18.68 | 15.19 | 0.00 | 3.86 |
2594 | 2763 | 1.064654 | CCAGAAAATAGCGCTTCCTGC | 59.935 | 52.381 | 18.68 | 2.81 | 38.57 | 4.85 |
2727 | 2896 | 5.152623 | TCTGAATCTAACCACACCAGAAG | 57.847 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
2782 | 2957 | 1.985159 | AGCAACATGGTCCAACTAGGA | 59.015 | 47.619 | 0.00 | 0.00 | 46.75 | 2.94 |
2857 | 3035 | 9.450807 | CTGAACTAAACATCAAAACTTTACCAG | 57.549 | 33.333 | 0.00 | 0.00 | 0.00 | 4.00 |
2911 | 3089 | 1.537397 | TCCTCTTCTGCACAGGCCT | 60.537 | 57.895 | 0.00 | 0.00 | 40.13 | 5.19 |
2990 | 3168 | 6.653020 | ACATCCACATGAGCTCATTTACTTA | 58.347 | 36.000 | 26.70 | 10.58 | 33.61 | 2.24 |
2992 | 3170 | 6.299805 | TCCACATGAGCTCATTTACTTAGT | 57.700 | 37.500 | 26.70 | 16.12 | 33.61 | 2.24 |
3092 | 3270 | 4.526262 | CGGACCTATGGATCTGAAGAGATT | 59.474 | 45.833 | 0.00 | 0.00 | 39.19 | 2.40 |
3141 | 3321 | 7.993418 | CTTCTCAAAGAGAGGGATCTTCCCAA | 61.993 | 46.154 | 14.84 | 0.00 | 46.40 | 4.12 |
3232 | 3412 | 6.050432 | TGCAAATTGCTCTTCTTTTGAACAT | 58.950 | 32.000 | 19.34 | 0.00 | 45.31 | 2.71 |
3246 | 3426 | 6.476380 | TCTTTTGAACATTCAGATTGTTGCAC | 59.524 | 34.615 | 14.13 | 2.86 | 37.43 | 4.57 |
3314 | 3495 | 3.068873 | TCGTTTTGGGGGAAAATGTGAAG | 59.931 | 43.478 | 0.00 | 0.00 | 40.25 | 3.02 |
3328 | 3509 | 7.336931 | GGAAAATGTGAAGCCTATTTCAGTAGA | 59.663 | 37.037 | 0.00 | 0.00 | 37.72 | 2.59 |
3390 | 3571 | 6.040616 | TCAGACCTTCTCGTCTCTTTTTAGTT | 59.959 | 38.462 | 0.00 | 0.00 | 41.23 | 2.24 |
3396 | 3577 | 5.784177 | TCTCGTCTCTTTTTAGTTGCAGAT | 58.216 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
3399 | 3580 | 5.179368 | TCGTCTCTTTTTAGTTGCAGATTGG | 59.821 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3460 | 3641 | 3.261897 | AGTGGGATGTGGTAGAAAGACTG | 59.738 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
3513 | 3694 | 1.051556 | GGGTGGCCTCCCAAACAAAA | 61.052 | 55.000 | 33.75 | 0.00 | 44.33 | 2.44 |
3537 | 3718 | 5.539193 | AGTCTGTTAGTGTAGTAAGCAGGTT | 59.461 | 40.000 | 0.00 | 0.00 | 0.00 | 3.50 |
3562 | 3743 | 4.055360 | CCTCACGTTAACAGTGACATTCA | 58.945 | 43.478 | 21.33 | 7.66 | 42.91 | 2.57 |
3602 | 3783 | 6.653526 | TTGGATTTGTATAATGCCATCCAG | 57.346 | 37.500 | 4.23 | 0.00 | 40.92 | 3.86 |
3652 | 3833 | 4.736126 | AGCAACAAAACTAAACCTTGCT | 57.264 | 36.364 | 0.00 | 0.00 | 39.54 | 3.91 |
3763 | 3946 | 5.836898 | TCCCACTTACAAGACTTCTGAGTTA | 59.163 | 40.000 | 0.00 | 0.00 | 35.88 | 2.24 |
3849 | 4032 | 3.829026 | TGCTGCTAGAACAGGATATCGAT | 59.171 | 43.478 | 2.16 | 2.16 | 38.16 | 3.59 |
3929 | 4112 | 2.887152 | GGTGGAGCTTGAATGTGAAAGT | 59.113 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
4052 | 4235 | 3.379372 | AGCAGTGTGAATATGTTGCCATC | 59.621 | 43.478 | 0.00 | 0.00 | 32.29 | 3.51 |
4292 | 4493 | 3.551890 | GTCCTATATGTGTGCACTTGTCG | 59.448 | 47.826 | 19.41 | 0.58 | 0.00 | 4.35 |
4330 | 4531 | 9.466497 | AATATTTTATCACATCACCAGTTCACT | 57.534 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
4347 | 4631 | 7.202001 | CCAGTTCACTACATAGGAATGGTATGA | 60.202 | 40.741 | 0.00 | 0.00 | 37.43 | 2.15 |
4416 | 4700 | 2.231721 | ACTAAGGCGAGAAAGTCAGGAC | 59.768 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4482 | 4767 | 7.974243 | TTGCATTTCATGAACATCTAAATCG | 57.026 | 32.000 | 7.89 | 0.00 | 0.00 | 3.34 |
4487 | 4772 | 8.791605 | CATTTCATGAACATCTAAATCGTGTTG | 58.208 | 33.333 | 7.89 | 0.00 | 36.30 | 3.33 |
4488 | 4773 | 7.433708 | TTCATGAACATCTAAATCGTGTTGT | 57.566 | 32.000 | 3.38 | 0.00 | 36.30 | 3.32 |
4507 | 4792 | 4.322080 | TGTGCTTATCCTGTCTTATCGG | 57.678 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
4557 | 4842 | 2.962859 | ACAGTTCCCAGAAATTTGGCT | 58.037 | 42.857 | 0.00 | 0.00 | 36.88 | 4.75 |
4588 | 4873 | 3.055819 | AGTGCTAATGTACCACTCCACAG | 60.056 | 47.826 | 0.00 | 0.00 | 34.99 | 3.66 |
4807 | 5092 | 7.836842 | ACGGATTCTAAGCCACAAAATAAAAT | 58.163 | 30.769 | 0.00 | 0.00 | 32.95 | 1.82 |
4864 | 5151 | 7.654022 | TGGTTGTCTTAAGGAATTTCTGTTT | 57.346 | 32.000 | 1.85 | 0.00 | 0.00 | 2.83 |
4897 | 5184 | 1.079127 | GCTGGAGTGTGGCGTACAT | 60.079 | 57.895 | 0.00 | 0.00 | 42.24 | 2.29 |
4974 | 5261 | 2.743928 | GCAGTCCGAGCAACCCTG | 60.744 | 66.667 | 0.00 | 0.00 | 0.00 | 4.45 |
5203 | 5490 | 6.546395 | AGTAGCAAAAGATATTTTGACTGCG | 58.454 | 36.000 | 25.61 | 2.36 | 42.79 | 5.18 |
5240 | 5530 | 2.178912 | CCTCGTTGGGCTCTAAAACA | 57.821 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
5514 | 5808 | 4.036144 | AGTTTCTCAAGAAGTGCTTTCAGC | 59.964 | 41.667 | 4.71 | 0.00 | 38.31 | 4.26 |
5550 | 5847 | 1.751924 | GTCTCCGCTTCTCCACATACT | 59.248 | 52.381 | 0.00 | 0.00 | 0.00 | 2.12 |
5561 | 5859 | 7.955864 | CGCTTCTCCACATACTAAAAACTTAAC | 59.044 | 37.037 | 0.00 | 0.00 | 0.00 | 2.01 |
5730 | 6028 | 9.196552 | GAAAACAGGGAACAATTTTGAAGATAG | 57.803 | 33.333 | 0.00 | 0.00 | 31.97 | 2.08 |
5798 | 6099 | 6.710744 | CAGGTAAACCAACATCTTAGTCAAGT | 59.289 | 38.462 | 1.26 | 0.00 | 38.89 | 3.16 |
5799 | 6100 | 6.935208 | AGGTAAACCAACATCTTAGTCAAGTC | 59.065 | 38.462 | 1.26 | 0.00 | 38.89 | 3.01 |
5819 | 6120 | 6.931790 | AGTCTATGAGCATTCAGACCATAT | 57.068 | 37.500 | 8.89 | 0.00 | 36.61 | 1.78 |
5846 | 6157 | 6.511416 | GCTAGACTGTAACTGACATCATCAT | 58.489 | 40.000 | 0.00 | 0.00 | 37.45 | 2.45 |
5927 | 6238 | 4.390603 | GTGCATCGTACAACCTTGTATTCA | 59.609 | 41.667 | 1.32 | 0.00 | 44.59 | 2.57 |
6162 | 6475 | 7.126421 | ACAGTTTCCATATCATACTCTGGTCTT | 59.874 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
6266 | 6579 | 7.174946 | ACTCTACAGGAAATGTAATGTGTTTGG | 59.825 | 37.037 | 0.00 | 0.00 | 43.78 | 3.28 |
6273 | 6586 | 7.656948 | AGGAAATGTAATGTGTTTGGATTTGTG | 59.343 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
6274 | 6587 | 7.440856 | GGAAATGTAATGTGTTTGGATTTGTGT | 59.559 | 33.333 | 0.00 | 0.00 | 0.00 | 3.72 |
6275 | 6588 | 7.712264 | AATGTAATGTGTTTGGATTTGTGTG | 57.288 | 32.000 | 0.00 | 0.00 | 0.00 | 3.82 |
6276 | 6589 | 6.214191 | TGTAATGTGTTTGGATTTGTGTGT | 57.786 | 33.333 | 0.00 | 0.00 | 0.00 | 3.72 |
6277 | 6590 | 6.038985 | TGTAATGTGTTTGGATTTGTGTGTG | 58.961 | 36.000 | 0.00 | 0.00 | 0.00 | 3.82 |
6312 | 6625 | 2.618709 | AGCGCTAACAAGCAAAAGAAGT | 59.381 | 40.909 | 8.99 | 0.00 | 35.48 | 3.01 |
6313 | 6626 | 3.813166 | AGCGCTAACAAGCAAAAGAAGTA | 59.187 | 39.130 | 8.99 | 0.00 | 35.48 | 2.24 |
6314 | 6627 | 3.906601 | GCGCTAACAAGCAAAAGAAGTAC | 59.093 | 43.478 | 0.00 | 0.00 | 34.41 | 2.73 |
6315 | 6628 | 4.464112 | CGCTAACAAGCAAAAGAAGTACC | 58.536 | 43.478 | 0.00 | 0.00 | 34.41 | 3.34 |
6316 | 6629 | 4.213482 | CGCTAACAAGCAAAAGAAGTACCT | 59.787 | 41.667 | 0.00 | 0.00 | 34.41 | 3.08 |
6317 | 6630 | 5.452777 | GCTAACAAGCAAAAGAAGTACCTG | 58.547 | 41.667 | 0.00 | 0.00 | 34.41 | 4.00 |
6318 | 6631 | 5.008712 | GCTAACAAGCAAAAGAAGTACCTGT | 59.991 | 40.000 | 0.00 | 0.00 | 34.41 | 4.00 |
6354 | 6667 | 2.409870 | GCAGCTGCGCTATTTGGGT | 61.410 | 57.895 | 25.23 | 0.00 | 36.40 | 4.51 |
6357 | 6670 | 0.609131 | AGCTGCGCTATTTGGGTGTT | 60.609 | 50.000 | 9.73 | 0.00 | 36.99 | 3.32 |
6376 | 6689 | 2.528743 | GCGAGCGCATGCAGTACAT | 61.529 | 57.895 | 19.57 | 0.00 | 46.23 | 2.29 |
6411 | 6724 | 9.503369 | ACTCACCCTATAAAAATAGTACTTCCT | 57.497 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
6412 | 6725 | 9.984190 | CTCACCCTATAAAAATAGTACTTCCTC | 57.016 | 37.037 | 0.00 | 0.00 | 0.00 | 3.71 |
6413 | 6726 | 8.931568 | TCACCCTATAAAAATAGTACTTCCTCC | 58.068 | 37.037 | 0.00 | 0.00 | 0.00 | 4.30 |
6414 | 6727 | 7.871463 | CACCCTATAAAAATAGTACTTCCTCCG | 59.129 | 40.741 | 0.00 | 0.00 | 0.00 | 4.63 |
6415 | 6728 | 7.566509 | ACCCTATAAAAATAGTACTTCCTCCGT | 59.433 | 37.037 | 0.00 | 0.00 | 0.00 | 4.69 |
6416 | 6729 | 8.427276 | CCCTATAAAAATAGTACTTCCTCCGTT | 58.573 | 37.037 | 0.00 | 0.00 | 0.00 | 4.44 |
6417 | 6730 | 9.473640 | CCTATAAAAATAGTACTTCCTCCGTTC | 57.526 | 37.037 | 0.00 | 0.00 | 0.00 | 3.95 |
6418 | 6731 | 9.473640 | CTATAAAAATAGTACTTCCTCCGTTCC | 57.526 | 37.037 | 0.00 | 0.00 | 0.00 | 3.62 |
6419 | 6732 | 6.370186 | AAAAATAGTACTTCCTCCGTTCCT | 57.630 | 37.500 | 0.00 | 0.00 | 0.00 | 3.36 |
6420 | 6733 | 7.486407 | AAAAATAGTACTTCCTCCGTTCCTA | 57.514 | 36.000 | 0.00 | 0.00 | 0.00 | 2.94 |
6421 | 6734 | 7.486407 | AAAATAGTACTTCCTCCGTTCCTAA | 57.514 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
6422 | 6735 | 7.486407 | AAATAGTACTTCCTCCGTTCCTAAA | 57.514 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
6423 | 6736 | 7.672122 | AATAGTACTTCCTCCGTTCCTAAAT | 57.328 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
6424 | 6737 | 8.773033 | AATAGTACTTCCTCCGTTCCTAAATA | 57.227 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
6425 | 6738 | 8.953223 | ATAGTACTTCCTCCGTTCCTAAATAT | 57.047 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
6426 | 6739 | 7.672122 | AGTACTTCCTCCGTTCCTAAATATT | 57.328 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
6427 | 6740 | 8.087303 | AGTACTTCCTCCGTTCCTAAATATTT | 57.913 | 34.615 | 5.89 | 5.89 | 0.00 | 1.40 |
6428 | 6741 | 7.985752 | AGTACTTCCTCCGTTCCTAAATATTTG | 59.014 | 37.037 | 11.05 | 1.40 | 0.00 | 2.32 |
6429 | 6742 | 6.718294 | ACTTCCTCCGTTCCTAAATATTTGT | 58.282 | 36.000 | 11.05 | 0.00 | 0.00 | 2.83 |
6430 | 6743 | 6.822170 | ACTTCCTCCGTTCCTAAATATTTGTC | 59.178 | 38.462 | 11.05 | 0.00 | 0.00 | 3.18 |
6431 | 6744 | 6.555463 | TCCTCCGTTCCTAAATATTTGTCT | 57.445 | 37.500 | 11.05 | 0.00 | 0.00 | 3.41 |
6432 | 6745 | 6.954232 | TCCTCCGTTCCTAAATATTTGTCTT | 58.046 | 36.000 | 11.05 | 0.00 | 0.00 | 3.01 |
6433 | 6746 | 7.399634 | TCCTCCGTTCCTAAATATTTGTCTTT | 58.600 | 34.615 | 11.05 | 0.00 | 0.00 | 2.52 |
6434 | 6747 | 7.551617 | TCCTCCGTTCCTAAATATTTGTCTTTC | 59.448 | 37.037 | 11.05 | 0.00 | 0.00 | 2.62 |
6435 | 6748 | 7.553044 | CCTCCGTTCCTAAATATTTGTCTTTCT | 59.447 | 37.037 | 11.05 | 0.00 | 0.00 | 2.52 |
6436 | 6749 | 9.595823 | CTCCGTTCCTAAATATTTGTCTTTCTA | 57.404 | 33.333 | 11.05 | 0.00 | 0.00 | 2.10 |
6437 | 6750 | 9.595823 | TCCGTTCCTAAATATTTGTCTTTCTAG | 57.404 | 33.333 | 11.05 | 0.00 | 0.00 | 2.43 |
6438 | 6751 | 9.595823 | CCGTTCCTAAATATTTGTCTTTCTAGA | 57.404 | 33.333 | 11.05 | 0.00 | 0.00 | 2.43 |
6451 | 6764 | 8.964476 | TTGTCTTTCTAGAGATTTCAACAAGT | 57.036 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
6452 | 6765 | 8.370493 | TGTCTTTCTAGAGATTTCAACAAGTG | 57.630 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
6453 | 6766 | 8.204160 | TGTCTTTCTAGAGATTTCAACAAGTGA | 58.796 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
6454 | 6767 | 8.491950 | GTCTTTCTAGAGATTTCAACAAGTGAC | 58.508 | 37.037 | 0.00 | 0.00 | 35.39 | 3.67 |
6455 | 6768 | 8.424918 | TCTTTCTAGAGATTTCAACAAGTGACT | 58.575 | 33.333 | 0.00 | 0.00 | 35.39 | 3.41 |
6456 | 6769 | 9.698309 | CTTTCTAGAGATTTCAACAAGTGACTA | 57.302 | 33.333 | 0.00 | 0.00 | 35.39 | 2.59 |
6462 | 6775 | 9.737427 | AGAGATTTCAACAAGTGACTATATACG | 57.263 | 33.333 | 0.00 | 0.00 | 35.39 | 3.06 |
6463 | 6776 | 8.873215 | AGATTTCAACAAGTGACTATATACGG | 57.127 | 34.615 | 0.00 | 0.00 | 35.39 | 4.02 |
6464 | 6777 | 8.692710 | AGATTTCAACAAGTGACTATATACGGA | 58.307 | 33.333 | 0.00 | 0.00 | 35.39 | 4.69 |
6465 | 6778 | 8.873215 | ATTTCAACAAGTGACTATATACGGAG | 57.127 | 34.615 | 0.00 | 0.00 | 35.39 | 4.63 |
6466 | 6779 | 5.828747 | TCAACAAGTGACTATATACGGAGC | 58.171 | 41.667 | 0.00 | 0.00 | 0.00 | 4.70 |
6467 | 6780 | 5.358725 | TCAACAAGTGACTATATACGGAGCA | 59.641 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
6468 | 6781 | 5.847111 | ACAAGTGACTATATACGGAGCAA | 57.153 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
6469 | 6782 | 6.216801 | ACAAGTGACTATATACGGAGCAAA | 57.783 | 37.500 | 0.00 | 0.00 | 0.00 | 3.68 |
6470 | 6783 | 6.636705 | ACAAGTGACTATATACGGAGCAAAA | 58.363 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
6471 | 6784 | 7.272978 | ACAAGTGACTATATACGGAGCAAAAT | 58.727 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
6472 | 6785 | 7.224753 | ACAAGTGACTATATACGGAGCAAAATG | 59.775 | 37.037 | 0.00 | 0.00 | 0.00 | 2.32 |
6473 | 6786 | 7.050970 | AGTGACTATATACGGAGCAAAATGA | 57.949 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
6474 | 6787 | 7.148641 | AGTGACTATATACGGAGCAAAATGAG | 58.851 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
6475 | 6788 | 6.924060 | GTGACTATATACGGAGCAAAATGAGT | 59.076 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
6476 | 6789 | 6.923508 | TGACTATATACGGAGCAAAATGAGTG | 59.076 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
6477 | 6790 | 7.050970 | ACTATATACGGAGCAAAATGAGTGA | 57.949 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
6478 | 6791 | 7.497595 | ACTATATACGGAGCAAAATGAGTGAA | 58.502 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
6479 | 6792 | 8.150945 | ACTATATACGGAGCAAAATGAGTGAAT | 58.849 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
6480 | 6793 | 5.741388 | ATACGGAGCAAAATGAGTGAATC | 57.259 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
6481 | 6794 | 3.679389 | ACGGAGCAAAATGAGTGAATCT | 58.321 | 40.909 | 0.00 | 0.00 | 0.00 | 2.40 |
6482 | 6795 | 4.832248 | ACGGAGCAAAATGAGTGAATCTA | 58.168 | 39.130 | 0.00 | 0.00 | 0.00 | 1.98 |
6483 | 6796 | 4.631813 | ACGGAGCAAAATGAGTGAATCTAC | 59.368 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
6484 | 6797 | 4.259970 | CGGAGCAAAATGAGTGAATCTACG | 60.260 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
6485 | 6798 | 4.494855 | GGAGCAAAATGAGTGAATCTACGC | 60.495 | 45.833 | 0.00 | 0.00 | 0.00 | 4.42 |
6486 | 6799 | 4.256920 | AGCAAAATGAGTGAATCTACGCT | 58.743 | 39.130 | 0.00 | 0.00 | 0.00 | 5.07 |
6487 | 6800 | 4.697352 | AGCAAAATGAGTGAATCTACGCTT | 59.303 | 37.500 | 0.00 | 0.00 | 0.00 | 4.68 |
6488 | 6801 | 5.182001 | AGCAAAATGAGTGAATCTACGCTTT | 59.818 | 36.000 | 0.00 | 0.00 | 0.00 | 3.51 |
6489 | 6802 | 6.371548 | AGCAAAATGAGTGAATCTACGCTTTA | 59.628 | 34.615 | 0.00 | 0.00 | 0.00 | 1.85 |
6490 | 6803 | 7.021196 | GCAAAATGAGTGAATCTACGCTTTAA | 58.979 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
6491 | 6804 | 7.537306 | GCAAAATGAGTGAATCTACGCTTTAAA | 59.463 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
6492 | 6805 | 9.393249 | CAAAATGAGTGAATCTACGCTTTAAAA | 57.607 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
6497 | 6810 | 9.378551 | TGAGTGAATCTACGCTTTAAAATATGT | 57.621 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
6498 | 6811 | 9.851043 | GAGTGAATCTACGCTTTAAAATATGTC | 57.149 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
6499 | 6812 | 9.601217 | AGTGAATCTACGCTTTAAAATATGTCT | 57.399 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
6521 | 6834 | 9.387257 | TGTCTATATACATTCGTCGTATATGGT | 57.613 | 33.333 | 16.99 | 0.00 | 40.84 | 3.55 |
6526 | 6839 | 5.368256 | ACATTCGTCGTATATGGTAGTCC | 57.632 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
6527 | 6840 | 7.823799 | TATACATTCGTCGTATATGGTAGTCCA | 59.176 | 37.037 | 0.00 | 0.00 | 38.09 | 4.02 |
6542 | 6855 | 7.733773 | TGGTAGTCCATTTGAAATCTCTAGA | 57.266 | 36.000 | 0.00 | 0.00 | 39.03 | 2.43 |
6543 | 6856 | 8.146053 | TGGTAGTCCATTTGAAATCTCTAGAA | 57.854 | 34.615 | 0.00 | 0.00 | 39.03 | 2.10 |
6544 | 6857 | 8.602424 | TGGTAGTCCATTTGAAATCTCTAGAAA | 58.398 | 33.333 | 0.00 | 0.00 | 39.03 | 2.52 |
6545 | 6858 | 9.103861 | GGTAGTCCATTTGAAATCTCTAGAAAG | 57.896 | 37.037 | 0.00 | 0.00 | 0.00 | 2.62 |
6546 | 6859 | 9.877178 | GTAGTCCATTTGAAATCTCTAGAAAGA | 57.123 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
6547 | 6860 | 8.785329 | AGTCCATTTGAAATCTCTAGAAAGAC | 57.215 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
6548 | 6861 | 8.378565 | AGTCCATTTGAAATCTCTAGAAAGACA | 58.621 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
6549 | 6862 | 9.003658 | GTCCATTTGAAATCTCTAGAAAGACAA | 57.996 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
6550 | 6863 | 9.573166 | TCCATTTGAAATCTCTAGAAAGACAAA | 57.427 | 29.630 | 0.00 | 4.41 | 0.00 | 2.83 |
6563 | 6876 | 9.595823 | TCTAGAAAGACAAATATTTAGGAACGG | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 4.44 |
6564 | 6877 | 9.595823 | CTAGAAAGACAAATATTTAGGAACGGA | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 4.69 |
6565 | 6878 | 8.494016 | AGAAAGACAAATATTTAGGAACGGAG | 57.506 | 34.615 | 0.00 | 0.00 | 0.00 | 4.63 |
6566 | 6879 | 7.553044 | AGAAAGACAAATATTTAGGAACGGAGG | 59.447 | 37.037 | 0.00 | 0.00 | 0.00 | 4.30 |
6567 | 6880 | 5.681639 | AGACAAATATTTAGGAACGGAGGG | 58.318 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
6676 | 6989 | 7.667219 | ACAAATCAGTCAAGAAAGGACATGTAT | 59.333 | 33.333 | 0.00 | 0.00 | 37.74 | 2.29 |
6735 | 7049 | 9.643693 | AAGCCATAACTTTTTGATTCAAGTATG | 57.356 | 29.630 | 0.00 | 4.81 | 32.74 | 2.39 |
6748 | 7062 | 8.827832 | TGATTCAAGTATGGGAATTCAGATTT | 57.172 | 30.769 | 7.93 | 0.00 | 34.06 | 2.17 |
6750 | 7064 | 6.455360 | TCAAGTATGGGAATTCAGATTTGC | 57.545 | 37.500 | 7.93 | 0.00 | 29.59 | 3.68 |
6915 | 7230 | 9.625747 | TTTGTCTATTATGATTGCCTATCAACA | 57.374 | 29.630 | 3.10 | 0.38 | 45.99 | 3.33 |
7025 | 7668 | 5.642063 | ACAGTTGTCTAAAACCATGTATCCG | 59.358 | 40.000 | 0.00 | 0.00 | 0.00 | 4.18 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
31 | 32 | 1.227674 | GAAAGATCTGCCGGCCGAT | 60.228 | 57.895 | 30.55 | 30.55 | 0.00 | 4.18 |
41 | 42 | 5.048507 | GCGACGGGTATTTTAGAAAGATCT | 58.951 | 41.667 | 0.00 | 0.00 | 39.82 | 2.75 |
175 | 201 | 2.949644 | AGGTTTCTCCCGTGTTTCAAAG | 59.050 | 45.455 | 0.00 | 0.00 | 36.75 | 2.77 |
180 | 206 | 3.358118 | TGAAAAGGTTTCTCCCGTGTTT | 58.642 | 40.909 | 2.68 | 0.00 | 36.75 | 2.83 |
542 | 572 | 7.930325 | TCTGAAACATCATTGGTATTGCAAAAA | 59.070 | 29.630 | 1.71 | 0.00 | 0.00 | 1.94 |
583 | 618 | 2.884639 | TCTTTACTTGCCTGTTTCTGCC | 59.115 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
592 | 627 | 2.143925 | GACGCTTGTCTTTACTTGCCT | 58.856 | 47.619 | 0.00 | 0.00 | 39.61 | 4.75 |
599 | 634 | 3.428452 | CCTCCATACGACGCTTGTCTTTA | 60.428 | 47.826 | 0.00 | 0.00 | 40.61 | 1.85 |
612 | 647 | 2.028190 | CGCTGCCTCCTCCATACG | 59.972 | 66.667 | 0.00 | 0.00 | 0.00 | 3.06 |
613 | 648 | 2.134287 | TCCGCTGCCTCCTCCATAC | 61.134 | 63.158 | 0.00 | 0.00 | 0.00 | 2.39 |
614 | 649 | 2.134287 | GTCCGCTGCCTCCTCCATA | 61.134 | 63.158 | 0.00 | 0.00 | 0.00 | 2.74 |
615 | 650 | 3.474570 | GTCCGCTGCCTCCTCCAT | 61.475 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
618 | 653 | 3.492311 | GATCGTCCGCTGCCTCCTC | 62.492 | 68.421 | 0.00 | 0.00 | 0.00 | 3.71 |
619 | 654 | 3.532155 | GATCGTCCGCTGCCTCCT | 61.532 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
620 | 655 | 4.933064 | CGATCGTCCGCTGCCTCC | 62.933 | 72.222 | 7.03 | 0.00 | 0.00 | 4.30 |
638 | 673 | 0.955428 | GTTTCAGCTGGCGGATCACA | 60.955 | 55.000 | 15.13 | 0.00 | 0.00 | 3.58 |
714 | 751 | 4.968259 | AGCATTTGGGTCGTGCTAATATA | 58.032 | 39.130 | 0.00 | 0.00 | 46.54 | 0.86 |
745 | 782 | 3.942748 | ACGAACTTGCCACTAAACTTTGA | 59.057 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
750 | 787 | 1.334689 | GCCACGAACTTGCCACTAAAC | 60.335 | 52.381 | 0.00 | 0.00 | 0.00 | 2.01 |
801 | 838 | 4.102681 | ACTCCCCCAACTATTAAATCGGAG | 59.897 | 45.833 | 0.00 | 0.00 | 40.19 | 4.63 |
988 | 1041 | 4.227134 | CTCCATGGGCGACGGAGG | 62.227 | 72.222 | 13.02 | 0.00 | 42.27 | 4.30 |
989 | 1042 | 4.227134 | CCTCCATGGGCGACGGAG | 62.227 | 72.222 | 13.02 | 4.50 | 45.02 | 4.63 |
1059 | 1127 | 2.722201 | GGTGGAGACGGCGGAGAAT | 61.722 | 63.158 | 13.24 | 0.00 | 0.00 | 2.40 |
1271 | 1339 | 1.337118 | GAGGAGGAGCCATCGAAGAT | 58.663 | 55.000 | 0.00 | 0.00 | 45.12 | 2.40 |
1405 | 1473 | 1.371337 | CCACCAGCATCACCGACATG | 61.371 | 60.000 | 0.00 | 0.00 | 0.00 | 3.21 |
1630 | 1705 | 5.660460 | AGAATTTGTTTTGGTGTTCTGGAC | 58.340 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
1719 | 1794 | 5.320723 | CACGAAATAAATTAGCAAGACGCA | 58.679 | 37.500 | 0.00 | 0.00 | 46.13 | 5.24 |
1937 | 2014 | 2.624674 | AATGCGGTATGGGGGCAGTC | 62.625 | 60.000 | 0.00 | 0.00 | 40.44 | 3.51 |
1951 | 2028 | 7.172654 | TGTAATGTACTAATGCAGTAATGCG | 57.827 | 36.000 | 10.97 | 0.00 | 41.45 | 4.73 |
1955 | 2032 | 8.888716 | CATGGTTGTAATGTACTAATGCAGTAA | 58.111 | 33.333 | 0.00 | 0.00 | 41.45 | 2.24 |
1956 | 2033 | 8.044309 | ACATGGTTGTAATGTACTAATGCAGTA | 58.956 | 33.333 | 0.00 | 0.00 | 36.50 | 2.74 |
1957 | 2034 | 6.884295 | ACATGGTTGTAATGTACTAATGCAGT | 59.116 | 34.615 | 0.00 | 0.00 | 36.50 | 4.40 |
1958 | 2035 | 7.280876 | AGACATGGTTGTAATGTACTAATGCAG | 59.719 | 37.037 | 0.00 | 0.00 | 38.37 | 4.41 |
1959 | 2036 | 7.065683 | CAGACATGGTTGTAATGTACTAATGCA | 59.934 | 37.037 | 0.00 | 0.00 | 38.37 | 3.96 |
1960 | 2037 | 7.065803 | ACAGACATGGTTGTAATGTACTAATGC | 59.934 | 37.037 | 0.00 | 0.00 | 38.37 | 3.56 |
1961 | 2038 | 8.492673 | ACAGACATGGTTGTAATGTACTAATG | 57.507 | 34.615 | 0.00 | 0.00 | 38.37 | 1.90 |
1962 | 2039 | 8.946085 | CAACAGACATGGTTGTAATGTACTAAT | 58.054 | 33.333 | 0.00 | 0.00 | 40.48 | 1.73 |
1975 | 2052 | 2.481795 | GCAAGTTGCAACAGACATGGTT | 60.482 | 45.455 | 30.11 | 11.13 | 44.26 | 3.67 |
2020 | 2097 | 4.160329 | AGATAGGTGAGTGTTCAGGTTCA | 58.840 | 43.478 | 0.00 | 0.00 | 32.98 | 3.18 |
2043 | 2203 | 4.604050 | TGAGGAGGACCATACTATAGAGCT | 59.396 | 45.833 | 6.78 | 0.00 | 38.94 | 4.09 |
2044 | 2204 | 4.924625 | TGAGGAGGACCATACTATAGAGC | 58.075 | 47.826 | 6.78 | 0.00 | 38.94 | 4.09 |
2045 | 2205 | 9.535170 | TTATTTGAGGAGGACCATACTATAGAG | 57.465 | 37.037 | 6.78 | 0.00 | 38.94 | 2.43 |
2046 | 2206 | 9.535170 | CTTATTTGAGGAGGACCATACTATAGA | 57.465 | 37.037 | 6.78 | 0.00 | 38.94 | 1.98 |
2047 | 2207 | 9.315363 | ACTTATTTGAGGAGGACCATACTATAG | 57.685 | 37.037 | 0.00 | 0.00 | 38.94 | 1.31 |
2048 | 2208 | 9.090103 | CACTTATTTGAGGAGGACCATACTATA | 57.910 | 37.037 | 0.00 | 0.00 | 38.94 | 1.31 |
2049 | 2209 | 7.789831 | TCACTTATTTGAGGAGGACCATACTAT | 59.210 | 37.037 | 0.00 | 0.00 | 38.94 | 2.12 |
2056 | 2216 | 4.468153 | AGTCTCACTTATTTGAGGAGGACC | 59.532 | 45.833 | 0.46 | 0.00 | 42.95 | 4.46 |
2128 | 2295 | 9.303116 | CTGTAGTATCACAAATAGGATAGGTCT | 57.697 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
2134 | 2301 | 8.486210 | TCTTTGCTGTAGTATCACAAATAGGAT | 58.514 | 33.333 | 0.00 | 0.00 | 30.52 | 3.24 |
2135 | 2302 | 7.847096 | TCTTTGCTGTAGTATCACAAATAGGA | 58.153 | 34.615 | 0.00 | 0.00 | 30.52 | 2.94 |
2136 | 2303 | 8.492673 | TTCTTTGCTGTAGTATCACAAATAGG | 57.507 | 34.615 | 0.00 | 0.00 | 30.52 | 2.57 |
2137 | 2304 | 9.155975 | ACTTCTTTGCTGTAGTATCACAAATAG | 57.844 | 33.333 | 0.00 | 0.00 | 30.52 | 1.73 |
2138 | 2305 | 9.151471 | GACTTCTTTGCTGTAGTATCACAAATA | 57.849 | 33.333 | 0.00 | 0.00 | 30.52 | 1.40 |
2141 | 2308 | 6.521162 | TGACTTCTTTGCTGTAGTATCACAA | 58.479 | 36.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2159 | 2326 | 7.703328 | TGTCTGGTATCAAAACTTTTGACTTC | 58.297 | 34.615 | 17.33 | 11.10 | 0.00 | 3.01 |
2161 | 2329 | 7.556275 | TCTTGTCTGGTATCAAAACTTTTGACT | 59.444 | 33.333 | 17.33 | 10.35 | 0.00 | 3.41 |
2198 | 2367 | 6.889198 | ACTAAGAATAAGTTGCATGCTCCTA | 58.111 | 36.000 | 20.33 | 6.73 | 0.00 | 2.94 |
2300 | 2469 | 0.389817 | TCGATGCCAGACGTTGAAGG | 60.390 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2309 | 2478 | 2.946329 | GTCTAGTTCTCTCGATGCCAGA | 59.054 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2310 | 2479 | 2.286713 | CGTCTAGTTCTCTCGATGCCAG | 60.287 | 54.545 | 0.00 | 0.00 | 0.00 | 4.85 |
2311 | 2480 | 1.671328 | CGTCTAGTTCTCTCGATGCCA | 59.329 | 52.381 | 0.00 | 0.00 | 0.00 | 4.92 |
2312 | 2481 | 1.671845 | ACGTCTAGTTCTCTCGATGCC | 59.328 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
2313 | 2482 | 3.605231 | GCTACGTCTAGTTCTCTCGATGC | 60.605 | 52.174 | 0.00 | 0.00 | 0.00 | 3.91 |
2314 | 2483 | 3.556365 | TGCTACGTCTAGTTCTCTCGATG | 59.444 | 47.826 | 0.00 | 0.00 | 0.00 | 3.84 |
2315 | 2484 | 3.794717 | TGCTACGTCTAGTTCTCTCGAT | 58.205 | 45.455 | 0.00 | 0.00 | 0.00 | 3.59 |
2316 | 2485 | 3.242549 | TGCTACGTCTAGTTCTCTCGA | 57.757 | 47.619 | 0.00 | 0.00 | 0.00 | 4.04 |
2317 | 2486 | 4.201832 | ACAATGCTACGTCTAGTTCTCTCG | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 4.04 |
2318 | 2487 | 5.163744 | TGACAATGCTACGTCTAGTTCTCTC | 60.164 | 44.000 | 0.00 | 0.00 | 33.18 | 3.20 |
2319 | 2488 | 4.700692 | TGACAATGCTACGTCTAGTTCTCT | 59.299 | 41.667 | 0.00 | 0.00 | 33.18 | 3.10 |
2320 | 2489 | 4.794246 | GTGACAATGCTACGTCTAGTTCTC | 59.206 | 45.833 | 0.00 | 0.00 | 33.18 | 2.87 |
2321 | 2490 | 4.459685 | AGTGACAATGCTACGTCTAGTTCT | 59.540 | 41.667 | 0.00 | 0.00 | 33.18 | 3.01 |
2322 | 2491 | 4.559251 | CAGTGACAATGCTACGTCTAGTTC | 59.441 | 45.833 | 0.00 | 0.00 | 33.18 | 3.01 |
2323 | 2492 | 4.486090 | CAGTGACAATGCTACGTCTAGTT | 58.514 | 43.478 | 0.00 | 0.00 | 33.18 | 2.24 |
2324 | 2493 | 3.119459 | CCAGTGACAATGCTACGTCTAGT | 60.119 | 47.826 | 0.00 | 0.00 | 33.18 | 2.57 |
2325 | 2494 | 3.439293 | CCAGTGACAATGCTACGTCTAG | 58.561 | 50.000 | 0.00 | 0.00 | 33.18 | 2.43 |
2326 | 2495 | 2.165641 | CCCAGTGACAATGCTACGTCTA | 59.834 | 50.000 | 0.00 | 0.00 | 33.18 | 2.59 |
2327 | 2496 | 1.066858 | CCCAGTGACAATGCTACGTCT | 60.067 | 52.381 | 0.00 | 0.00 | 33.18 | 4.18 |
2328 | 2497 | 1.337823 | ACCCAGTGACAATGCTACGTC | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 4.34 |
2329 | 2498 | 0.685097 | ACCCAGTGACAATGCTACGT | 59.315 | 50.000 | 0.00 | 0.00 | 0.00 | 3.57 |
2330 | 2499 | 1.808411 | AACCCAGTGACAATGCTACG | 58.192 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2331 | 2500 | 2.488153 | GGAAACCCAGTGACAATGCTAC | 59.512 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
2332 | 2501 | 2.375174 | AGGAAACCCAGTGACAATGCTA | 59.625 | 45.455 | 0.00 | 0.00 | 0.00 | 3.49 |
2333 | 2502 | 1.145738 | AGGAAACCCAGTGACAATGCT | 59.854 | 47.619 | 0.00 | 0.00 | 0.00 | 3.79 |
2334 | 2503 | 1.620822 | AGGAAACCCAGTGACAATGC | 58.379 | 50.000 | 0.00 | 0.00 | 0.00 | 3.56 |
2335 | 2504 | 3.636300 | TGAAAGGAAACCCAGTGACAATG | 59.364 | 43.478 | 0.00 | 0.00 | 0.00 | 2.82 |
2336 | 2505 | 3.636764 | GTGAAAGGAAACCCAGTGACAAT | 59.363 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
2337 | 2506 | 3.020984 | GTGAAAGGAAACCCAGTGACAA | 58.979 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
2345 | 2514 | 3.208747 | TCTGACAGTGAAAGGAAACCC | 57.791 | 47.619 | 1.59 | 0.00 | 0.00 | 4.11 |
2383 | 2552 | 1.097547 | ATCATTTTCGCCCTGCTCCG | 61.098 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2388 | 2557 | 8.103948 | AGAGAATAATTATCATTTTCGCCCTG | 57.896 | 34.615 | 0.00 | 0.00 | 0.00 | 4.45 |
2414 | 2583 | 2.892425 | GCCCAGAATCCAGACGCG | 60.892 | 66.667 | 3.53 | 3.53 | 0.00 | 6.01 |
2415 | 2584 | 2.514824 | GGCCCAGAATCCAGACGC | 60.515 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
2416 | 2585 | 2.190578 | GGGCCCAGAATCCAGACG | 59.809 | 66.667 | 19.95 | 0.00 | 0.00 | 4.18 |
2417 | 2586 | 1.225704 | CAGGGCCCAGAATCCAGAC | 59.774 | 63.158 | 27.56 | 0.00 | 0.00 | 3.51 |
2469 | 2638 | 2.822643 | TAGGTCCCCAGCACCCAGAG | 62.823 | 65.000 | 0.00 | 0.00 | 33.96 | 3.35 |
2529 | 2698 | 3.016736 | CCGGGAAATGAGCTGTTACAAT | 58.983 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
2535 | 2704 | 1.002134 | CCACCGGGAAATGAGCTGT | 60.002 | 57.895 | 6.32 | 0.00 | 35.59 | 4.40 |
2587 | 2756 | 4.463891 | ACTGAAACATAAATGGGCAGGAAG | 59.536 | 41.667 | 0.00 | 0.00 | 32.43 | 3.46 |
2588 | 2757 | 4.415596 | ACTGAAACATAAATGGGCAGGAA | 58.584 | 39.130 | 0.00 | 0.00 | 32.43 | 3.36 |
2589 | 2758 | 4.046286 | ACTGAAACATAAATGGGCAGGA | 57.954 | 40.909 | 0.00 | 0.00 | 32.43 | 3.86 |
2590 | 2759 | 4.497300 | CAACTGAAACATAAATGGGCAGG | 58.503 | 43.478 | 0.00 | 0.00 | 32.43 | 4.85 |
2591 | 2760 | 3.928375 | GCAACTGAAACATAAATGGGCAG | 59.072 | 43.478 | 0.00 | 0.00 | 33.53 | 4.85 |
2592 | 2761 | 3.577848 | AGCAACTGAAACATAAATGGGCA | 59.422 | 39.130 | 0.00 | 0.00 | 0.00 | 5.36 |
2593 | 2762 | 4.176271 | GAGCAACTGAAACATAAATGGGC | 58.824 | 43.478 | 0.00 | 0.00 | 0.00 | 5.36 |
2594 | 2763 | 4.220382 | TGGAGCAACTGAAACATAAATGGG | 59.780 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
2727 | 2896 | 0.034186 | TGTCCAATGGTCTCCATGGC | 60.034 | 55.000 | 6.96 | 0.00 | 44.40 | 4.40 |
2782 | 2957 | 3.782656 | AGTACCATTCTTCCAAACGGT | 57.217 | 42.857 | 0.00 | 0.00 | 0.00 | 4.83 |
2857 | 3035 | 7.787725 | TTTTGAACTGAAGAGGAGTAACTTC | 57.212 | 36.000 | 0.00 | 0.00 | 41.67 | 3.01 |
2886 | 3064 | 3.007398 | CCTGTGCAGAAGAGGAGTAACTT | 59.993 | 47.826 | 0.02 | 0.00 | 42.17 | 2.66 |
2889 | 3067 | 1.276421 | GCCTGTGCAGAAGAGGAGTAA | 59.724 | 52.381 | 0.00 | 0.00 | 42.17 | 2.24 |
2894 | 3072 | 1.376942 | CAGGCCTGTGCAGAAGAGG | 60.377 | 63.158 | 25.53 | 0.00 | 42.49 | 3.69 |
2911 | 3089 | 8.044908 | GGTAATCAGTATCAGGGTTAAACTTCA | 58.955 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
2990 | 3168 | 4.631234 | TGGTGTAGGGAAATATCAGGACT | 58.369 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
2992 | 3170 | 3.973973 | CCTGGTGTAGGGAAATATCAGGA | 59.026 | 47.826 | 0.00 | 0.00 | 43.33 | 3.86 |
3092 | 3270 | 6.610830 | AGAATATGCCCACCAATTATTGAACA | 59.389 | 34.615 | 6.50 | 0.00 | 0.00 | 3.18 |
3314 | 3495 | 8.458843 | TGCATAAACTTTTCTACTGAAATAGGC | 58.541 | 33.333 | 0.00 | 0.00 | 41.24 | 3.93 |
3328 | 3509 | 7.424803 | TGCATCGCTATATTGCATAAACTTTT | 58.575 | 30.769 | 9.78 | 0.00 | 41.18 | 2.27 |
3390 | 3571 | 0.250684 | TTCAGTTCGGCCAATCTGCA | 60.251 | 50.000 | 2.24 | 0.00 | 0.00 | 4.41 |
3396 | 3577 | 5.763204 | GGAATATAATCTTCAGTTCGGCCAA | 59.237 | 40.000 | 2.24 | 0.00 | 0.00 | 4.52 |
3399 | 3580 | 6.861065 | TTGGAATATAATCTTCAGTTCGGC | 57.139 | 37.500 | 0.00 | 0.00 | 0.00 | 5.54 |
3460 | 3641 | 0.098728 | GGTACATGTGCACGCCAATC | 59.901 | 55.000 | 16.11 | 0.94 | 0.00 | 2.67 |
3513 | 3694 | 5.078256 | ACCTGCTTACTACACTAACAGACT | 58.922 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
3537 | 3718 | 2.427812 | TGTCACTGTTAACGTGAGGTCA | 59.572 | 45.455 | 23.96 | 18.25 | 41.62 | 4.02 |
3602 | 3783 | 6.808212 | CCATCACAAATGGTCTTTATTGTCAC | 59.192 | 38.462 | 0.00 | 0.00 | 33.97 | 3.67 |
3763 | 3946 | 1.771255 | ACAGAGGAACTTGAGCTTGGT | 59.229 | 47.619 | 0.00 | 0.00 | 41.55 | 3.67 |
3929 | 4112 | 2.852075 | AGACCCTTGACCGCCCAA | 60.852 | 61.111 | 0.00 | 0.00 | 0.00 | 4.12 |
4195 | 4379 | 3.701542 | TGTGATAGACCTGTAGCTGGAAG | 59.298 | 47.826 | 0.00 | 0.00 | 0.00 | 3.46 |
4281 | 4473 | 4.600012 | AAAGCATATACGACAAGTGCAC | 57.400 | 40.909 | 9.40 | 9.40 | 38.23 | 4.57 |
4347 | 4631 | 1.210478 | CGAATGAGGTCAGGGAATGGT | 59.790 | 52.381 | 0.00 | 0.00 | 0.00 | 3.55 |
4482 | 4767 | 5.005779 | CGATAAGACAGGATAAGCACAACAC | 59.994 | 44.000 | 0.00 | 0.00 | 0.00 | 3.32 |
4487 | 4772 | 4.202121 | TGACCGATAAGACAGGATAAGCAC | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 4.40 |
4488 | 4773 | 3.958147 | TGACCGATAAGACAGGATAAGCA | 59.042 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
4507 | 4792 | 1.317613 | TGTTTCTGGCACCACATGAC | 58.682 | 50.000 | 0.00 | 0.00 | 36.53 | 3.06 |
4557 | 4842 | 6.825944 | TGGTACATTAGCACTATTTTGCAA | 57.174 | 33.333 | 0.00 | 0.00 | 45.62 | 4.08 |
4588 | 4873 | 5.909610 | GGAGCAAATAAAACGCTATCATGTC | 59.090 | 40.000 | 0.00 | 0.00 | 35.75 | 3.06 |
4864 | 5151 | 1.143277 | TCCAGCGGTTCCTTGGTTTAA | 59.857 | 47.619 | 8.39 | 0.00 | 33.65 | 1.52 |
4974 | 5261 | 7.193595 | CGACATATACAAATTTCCAACCCTTC | 58.806 | 38.462 | 0.00 | 0.00 | 0.00 | 3.46 |
5057 | 5344 | 5.827666 | TGCATAGTCAATTGATTGCATCAG | 58.172 | 37.500 | 26.51 | 10.20 | 40.94 | 2.90 |
5514 | 5808 | 5.812642 | AGCGGAGACAGTAATCAAATTGTAG | 59.187 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
5550 | 5847 | 9.949174 | GATGGTTTTAAGGACGTTAAGTTTTTA | 57.051 | 29.630 | 0.00 | 0.00 | 32.07 | 1.52 |
5561 | 5859 | 3.334691 | TGCAGAGATGGTTTTAAGGACG | 58.665 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
5798 | 6099 | 5.485620 | GCATATGGTCTGAATGCTCATAGA | 58.514 | 41.667 | 4.56 | 0.00 | 42.15 | 1.98 |
5799 | 6100 | 4.329256 | CGCATATGGTCTGAATGCTCATAG | 59.671 | 45.833 | 4.56 | 0.00 | 43.01 | 2.23 |
5819 | 6120 | 1.883926 | TGTCAGTTACAGTCTAGCGCA | 59.116 | 47.619 | 11.47 | 0.00 | 33.01 | 6.09 |
5927 | 6238 | 5.941555 | AAATAGTAGCTAGTCTTGCCAGT | 57.058 | 39.130 | 3.81 | 0.00 | 0.00 | 4.00 |
6162 | 6475 | 2.037902 | TGTACGAGAAAGCATCACCCAA | 59.962 | 45.455 | 0.00 | 0.00 | 0.00 | 4.12 |
6266 | 6579 | 3.126858 | ACAGACACACACACACACAAATC | 59.873 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
6273 | 6586 | 1.290203 | CTCCACAGACACACACACAC | 58.710 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
6274 | 6587 | 0.461870 | GCTCCACAGACACACACACA | 60.462 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
6275 | 6588 | 1.490693 | CGCTCCACAGACACACACAC | 61.491 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
6276 | 6589 | 1.227234 | CGCTCCACAGACACACACA | 60.227 | 57.895 | 0.00 | 0.00 | 0.00 | 3.72 |
6277 | 6590 | 2.598632 | GCGCTCCACAGACACACAC | 61.599 | 63.158 | 0.00 | 0.00 | 0.00 | 3.82 |
6312 | 6625 | 5.705441 | CACTTTGAAGCATTTAGGACAGGTA | 59.295 | 40.000 | 0.00 | 0.00 | 0.00 | 3.08 |
6313 | 6626 | 4.520492 | CACTTTGAAGCATTTAGGACAGGT | 59.480 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
6314 | 6627 | 4.616835 | GCACTTTGAAGCATTTAGGACAGG | 60.617 | 45.833 | 0.00 | 0.00 | 0.00 | 4.00 |
6315 | 6628 | 4.022935 | TGCACTTTGAAGCATTTAGGACAG | 60.023 | 41.667 | 0.00 | 0.00 | 35.51 | 3.51 |
6316 | 6629 | 3.888323 | TGCACTTTGAAGCATTTAGGACA | 59.112 | 39.130 | 0.00 | 0.00 | 35.51 | 4.02 |
6317 | 6630 | 4.479619 | CTGCACTTTGAAGCATTTAGGAC | 58.520 | 43.478 | 0.00 | 0.00 | 40.42 | 3.85 |
6318 | 6631 | 3.057315 | GCTGCACTTTGAAGCATTTAGGA | 60.057 | 43.478 | 0.93 | 0.00 | 40.42 | 2.94 |
6395 | 6708 | 7.486407 | AGGAACGGAGGAAGTACTATTTTTA | 57.514 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
6402 | 6715 | 7.672122 | AATATTTAGGAACGGAGGAAGTACT | 57.328 | 36.000 | 0.00 | 0.00 | 0.00 | 2.73 |
6403 | 6716 | 7.767659 | ACAAATATTTAGGAACGGAGGAAGTAC | 59.232 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
6404 | 6717 | 7.854337 | ACAAATATTTAGGAACGGAGGAAGTA | 58.146 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
6405 | 6718 | 6.718294 | ACAAATATTTAGGAACGGAGGAAGT | 58.282 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
6406 | 6719 | 7.048512 | AGACAAATATTTAGGAACGGAGGAAG | 58.951 | 38.462 | 0.00 | 0.00 | 0.00 | 3.46 |
6407 | 6720 | 6.954232 | AGACAAATATTTAGGAACGGAGGAA | 58.046 | 36.000 | 0.00 | 0.00 | 0.00 | 3.36 |
6408 | 6721 | 6.555463 | AGACAAATATTTAGGAACGGAGGA | 57.445 | 37.500 | 0.00 | 0.00 | 0.00 | 3.71 |
6409 | 6722 | 7.553044 | AGAAAGACAAATATTTAGGAACGGAGG | 59.447 | 37.037 | 0.00 | 0.00 | 0.00 | 4.30 |
6410 | 6723 | 8.494016 | AGAAAGACAAATATTTAGGAACGGAG | 57.506 | 34.615 | 0.00 | 0.00 | 0.00 | 4.63 |
6411 | 6724 | 9.595823 | CTAGAAAGACAAATATTTAGGAACGGA | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 4.69 |
6412 | 6725 | 9.595823 | TCTAGAAAGACAAATATTTAGGAACGG | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 4.44 |
6425 | 6738 | 9.396022 | ACTTGTTGAAATCTCTAGAAAGACAAA | 57.604 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
6426 | 6739 | 8.830580 | CACTTGTTGAAATCTCTAGAAAGACAA | 58.169 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
6427 | 6740 | 8.204160 | TCACTTGTTGAAATCTCTAGAAAGACA | 58.796 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
6428 | 6741 | 8.491950 | GTCACTTGTTGAAATCTCTAGAAAGAC | 58.508 | 37.037 | 0.00 | 0.00 | 35.39 | 3.01 |
6429 | 6742 | 8.424918 | AGTCACTTGTTGAAATCTCTAGAAAGA | 58.575 | 33.333 | 0.00 | 0.00 | 35.39 | 2.52 |
6430 | 6743 | 8.600449 | AGTCACTTGTTGAAATCTCTAGAAAG | 57.400 | 34.615 | 0.00 | 0.00 | 35.39 | 2.62 |
6436 | 6749 | 9.737427 | CGTATATAGTCACTTGTTGAAATCTCT | 57.263 | 33.333 | 0.00 | 0.00 | 35.39 | 3.10 |
6437 | 6750 | 8.969267 | CCGTATATAGTCACTTGTTGAAATCTC | 58.031 | 37.037 | 0.00 | 0.00 | 35.39 | 2.75 |
6438 | 6751 | 8.692710 | TCCGTATATAGTCACTTGTTGAAATCT | 58.307 | 33.333 | 0.00 | 0.00 | 35.39 | 2.40 |
6439 | 6752 | 8.867112 | TCCGTATATAGTCACTTGTTGAAATC | 57.133 | 34.615 | 0.00 | 0.00 | 35.39 | 2.17 |
6440 | 6753 | 7.438459 | GCTCCGTATATAGTCACTTGTTGAAAT | 59.562 | 37.037 | 0.00 | 0.00 | 35.39 | 2.17 |
6441 | 6754 | 6.755141 | GCTCCGTATATAGTCACTTGTTGAAA | 59.245 | 38.462 | 0.00 | 0.00 | 35.39 | 2.69 |
6442 | 6755 | 6.127563 | TGCTCCGTATATAGTCACTTGTTGAA | 60.128 | 38.462 | 0.00 | 0.00 | 35.39 | 2.69 |
6443 | 6756 | 5.358725 | TGCTCCGTATATAGTCACTTGTTGA | 59.641 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
6444 | 6757 | 5.588240 | TGCTCCGTATATAGTCACTTGTTG | 58.412 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
6445 | 6758 | 5.847111 | TGCTCCGTATATAGTCACTTGTT | 57.153 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
6446 | 6759 | 5.847111 | TTGCTCCGTATATAGTCACTTGT | 57.153 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
6447 | 6760 | 7.438160 | TCATTTTGCTCCGTATATAGTCACTTG | 59.562 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
6448 | 6761 | 7.497595 | TCATTTTGCTCCGTATATAGTCACTT | 58.502 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
6449 | 6762 | 7.050970 | TCATTTTGCTCCGTATATAGTCACT | 57.949 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
6450 | 6763 | 6.924060 | ACTCATTTTGCTCCGTATATAGTCAC | 59.076 | 38.462 | 0.00 | 0.00 | 0.00 | 3.67 |
6451 | 6764 | 6.923508 | CACTCATTTTGCTCCGTATATAGTCA | 59.076 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
6452 | 6765 | 7.145985 | TCACTCATTTTGCTCCGTATATAGTC | 58.854 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
6453 | 6766 | 7.050970 | TCACTCATTTTGCTCCGTATATAGT | 57.949 | 36.000 | 0.00 | 0.00 | 0.00 | 2.12 |
6454 | 6767 | 7.946655 | TTCACTCATTTTGCTCCGTATATAG | 57.053 | 36.000 | 0.00 | 0.00 | 0.00 | 1.31 |
6455 | 6768 | 8.367911 | AGATTCACTCATTTTGCTCCGTATATA | 58.632 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
6456 | 6769 | 7.220030 | AGATTCACTCATTTTGCTCCGTATAT | 58.780 | 34.615 | 0.00 | 0.00 | 0.00 | 0.86 |
6457 | 6770 | 6.582636 | AGATTCACTCATTTTGCTCCGTATA | 58.417 | 36.000 | 0.00 | 0.00 | 0.00 | 1.47 |
6458 | 6771 | 5.431765 | AGATTCACTCATTTTGCTCCGTAT | 58.568 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
6459 | 6772 | 4.832248 | AGATTCACTCATTTTGCTCCGTA | 58.168 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
6460 | 6773 | 3.679389 | AGATTCACTCATTTTGCTCCGT | 58.321 | 40.909 | 0.00 | 0.00 | 0.00 | 4.69 |
6461 | 6774 | 4.259970 | CGTAGATTCACTCATTTTGCTCCG | 60.260 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
6462 | 6775 | 4.494855 | GCGTAGATTCACTCATTTTGCTCC | 60.495 | 45.833 | 0.00 | 0.00 | 0.00 | 4.70 |
6463 | 6776 | 4.331168 | AGCGTAGATTCACTCATTTTGCTC | 59.669 | 41.667 | 0.00 | 0.00 | 0.00 | 4.26 |
6464 | 6777 | 4.256920 | AGCGTAGATTCACTCATTTTGCT | 58.743 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
6465 | 6778 | 4.606457 | AGCGTAGATTCACTCATTTTGC | 57.394 | 40.909 | 0.00 | 0.00 | 0.00 | 3.68 |
6466 | 6779 | 8.948853 | TTTAAAGCGTAGATTCACTCATTTTG | 57.051 | 30.769 | 0.00 | 0.00 | 31.23 | 2.44 |
6471 | 6784 | 9.378551 | ACATATTTTAAAGCGTAGATTCACTCA | 57.621 | 29.630 | 0.00 | 0.00 | 31.23 | 3.41 |
6472 | 6785 | 9.851043 | GACATATTTTAAAGCGTAGATTCACTC | 57.149 | 33.333 | 0.00 | 0.00 | 31.23 | 3.51 |
6473 | 6786 | 9.601217 | AGACATATTTTAAAGCGTAGATTCACT | 57.399 | 29.630 | 0.00 | 0.00 | 31.23 | 3.41 |
6495 | 6808 | 9.387257 | ACCATATACGACGAATGTATATAGACA | 57.613 | 33.333 | 2.07 | 2.07 | 41.34 | 3.41 |
6500 | 6813 | 8.834465 | GGACTACCATATACGACGAATGTATAT | 58.166 | 37.037 | 0.00 | 10.82 | 43.07 | 0.86 |
6501 | 6814 | 7.823799 | TGGACTACCATATACGACGAATGTATA | 59.176 | 37.037 | 0.00 | 0.00 | 41.77 | 1.47 |
6502 | 6815 | 6.656270 | TGGACTACCATATACGACGAATGTAT | 59.344 | 38.462 | 0.00 | 0.00 | 41.77 | 2.29 |
6503 | 6816 | 5.997129 | TGGACTACCATATACGACGAATGTA | 59.003 | 40.000 | 0.00 | 0.00 | 41.77 | 2.29 |
6504 | 6817 | 4.823442 | TGGACTACCATATACGACGAATGT | 59.177 | 41.667 | 0.00 | 0.00 | 41.77 | 2.71 |
6505 | 6818 | 5.366829 | TGGACTACCATATACGACGAATG | 57.633 | 43.478 | 0.00 | 2.29 | 41.77 | 2.67 |
6519 | 6832 | 9.103861 | CTTTCTAGAGATTTCAAATGGACTACC | 57.896 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
6520 | 6833 | 9.877178 | TCTTTCTAGAGATTTCAAATGGACTAC | 57.123 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
6521 | 6834 | 9.877178 | GTCTTTCTAGAGATTTCAAATGGACTA | 57.123 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
6522 | 6835 | 8.378565 | TGTCTTTCTAGAGATTTCAAATGGACT | 58.621 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
6523 | 6836 | 8.553459 | TGTCTTTCTAGAGATTTCAAATGGAC | 57.447 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
6524 | 6837 | 9.573166 | TTTGTCTTTCTAGAGATTTCAAATGGA | 57.427 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
6537 | 6850 | 9.595823 | CCGTTCCTAAATATTTGTCTTTCTAGA | 57.404 | 33.333 | 11.05 | 0.00 | 0.00 | 2.43 |
6538 | 6851 | 9.595823 | TCCGTTCCTAAATATTTGTCTTTCTAG | 57.404 | 33.333 | 11.05 | 0.00 | 0.00 | 2.43 |
6539 | 6852 | 9.595823 | CTCCGTTCCTAAATATTTGTCTTTCTA | 57.404 | 33.333 | 11.05 | 0.00 | 0.00 | 2.10 |
6540 | 6853 | 7.553044 | CCTCCGTTCCTAAATATTTGTCTTTCT | 59.447 | 37.037 | 11.05 | 0.00 | 0.00 | 2.52 |
6541 | 6854 | 7.201705 | CCCTCCGTTCCTAAATATTTGTCTTTC | 60.202 | 40.741 | 11.05 | 0.00 | 0.00 | 2.62 |
6542 | 6855 | 6.602009 | CCCTCCGTTCCTAAATATTTGTCTTT | 59.398 | 38.462 | 11.05 | 0.00 | 0.00 | 2.52 |
6543 | 6856 | 6.069847 | TCCCTCCGTTCCTAAATATTTGTCTT | 60.070 | 38.462 | 11.05 | 0.00 | 0.00 | 3.01 |
6544 | 6857 | 5.427481 | TCCCTCCGTTCCTAAATATTTGTCT | 59.573 | 40.000 | 11.05 | 0.00 | 0.00 | 3.41 |
6545 | 6858 | 5.677567 | TCCCTCCGTTCCTAAATATTTGTC | 58.322 | 41.667 | 11.05 | 0.00 | 0.00 | 3.18 |
6546 | 6859 | 5.191124 | ACTCCCTCCGTTCCTAAATATTTGT | 59.809 | 40.000 | 11.05 | 0.00 | 0.00 | 2.83 |
6547 | 6860 | 5.681639 | ACTCCCTCCGTTCCTAAATATTTG | 58.318 | 41.667 | 11.05 | 1.40 | 0.00 | 2.32 |
6548 | 6861 | 5.970501 | ACTCCCTCCGTTCCTAAATATTT | 57.029 | 39.130 | 5.89 | 5.89 | 0.00 | 1.40 |
6549 | 6862 | 7.628501 | ATTACTCCCTCCGTTCCTAAATATT | 57.371 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
6550 | 6863 | 7.628501 | AATTACTCCCTCCGTTCCTAAATAT | 57.371 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
6551 | 6864 | 7.256083 | GCTAATTACTCCCTCCGTTCCTAAATA | 60.256 | 40.741 | 0.00 | 0.00 | 0.00 | 1.40 |
6552 | 6865 | 5.970501 | AATTACTCCCTCCGTTCCTAAAT | 57.029 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
6553 | 6866 | 5.163374 | GCTAATTACTCCCTCCGTTCCTAAA | 60.163 | 44.000 | 0.00 | 0.00 | 0.00 | 1.85 |
6554 | 6867 | 4.343239 | GCTAATTACTCCCTCCGTTCCTAA | 59.657 | 45.833 | 0.00 | 0.00 | 0.00 | 2.69 |
6555 | 6868 | 3.893813 | GCTAATTACTCCCTCCGTTCCTA | 59.106 | 47.826 | 0.00 | 0.00 | 0.00 | 2.94 |
6556 | 6869 | 2.699321 | GCTAATTACTCCCTCCGTTCCT | 59.301 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
6557 | 6870 | 2.433239 | TGCTAATTACTCCCTCCGTTCC | 59.567 | 50.000 | 0.00 | 0.00 | 0.00 | 3.62 |
6558 | 6871 | 3.814005 | TGCTAATTACTCCCTCCGTTC | 57.186 | 47.619 | 0.00 | 0.00 | 0.00 | 3.95 |
6559 | 6872 | 4.409247 | AGAATGCTAATTACTCCCTCCGTT | 59.591 | 41.667 | 0.00 | 0.00 | 0.00 | 4.44 |
6560 | 6873 | 3.967987 | AGAATGCTAATTACTCCCTCCGT | 59.032 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
6561 | 6874 | 4.202264 | ACAGAATGCTAATTACTCCCTCCG | 60.202 | 45.833 | 0.00 | 0.00 | 42.53 | 4.63 |
6562 | 6875 | 5.059833 | CACAGAATGCTAATTACTCCCTCC | 58.940 | 45.833 | 0.00 | 0.00 | 42.53 | 4.30 |
6563 | 6876 | 5.675538 | ACACAGAATGCTAATTACTCCCTC | 58.324 | 41.667 | 0.00 | 0.00 | 42.53 | 4.30 |
6564 | 6877 | 5.189736 | TGACACAGAATGCTAATTACTCCCT | 59.810 | 40.000 | 0.00 | 0.00 | 42.53 | 4.20 |
6565 | 6878 | 5.428253 | TGACACAGAATGCTAATTACTCCC | 58.572 | 41.667 | 0.00 | 0.00 | 42.53 | 4.30 |
6566 | 6879 | 6.763135 | TGATGACACAGAATGCTAATTACTCC | 59.237 | 38.462 | 0.00 | 0.00 | 42.53 | 3.85 |
6567 | 6880 | 7.776933 | TGATGACACAGAATGCTAATTACTC | 57.223 | 36.000 | 0.00 | 0.00 | 42.53 | 2.59 |
6676 | 6989 | 9.678260 | ATTTTATTAAGCCCAAATAAATGCACA | 57.322 | 25.926 | 0.00 | 0.00 | 38.14 | 4.57 |
6719 | 7032 | 9.087871 | TCTGAATTCCCATACTTGAATCAAAAA | 57.912 | 29.630 | 2.27 | 0.00 | 31.05 | 1.94 |
6735 | 7049 | 4.498241 | GGTGAAAGCAAATCTGAATTCCC | 58.502 | 43.478 | 2.27 | 0.00 | 0.00 | 3.97 |
6748 | 7062 | 0.741915 | GAAACCCAACGGTGAAAGCA | 59.258 | 50.000 | 0.00 | 0.00 | 43.71 | 3.91 |
6750 | 7064 | 1.263217 | CGAGAAACCCAACGGTGAAAG | 59.737 | 52.381 | 0.00 | 0.00 | 43.71 | 2.62 |
6897 | 7212 | 7.828717 | TGACTTCTTGTTGATAGGCAATCATAA | 59.171 | 33.333 | 2.19 | 1.70 | 44.13 | 1.90 |
6915 | 7230 | 5.819901 | GTGAGGCAGCTTATAATGACTTCTT | 59.180 | 40.000 | 0.00 | 0.00 | 33.97 | 2.52 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.