Multiple sequence alignment - TraesCS2B01G176100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G176100 chr2B 100.000 2597 0 0 1 2597 151101885 151104481 0.000000e+00 4796.0
1 TraesCS2B01G176100 chr2B 87.805 410 45 5 3 409 68706639 68706232 2.340000e-130 475.0
2 TraesCS2B01G176100 chr2B 87.317 410 47 4 3 409 68790269 68789862 5.060000e-127 464.0
3 TraesCS2B01G176100 chr2B 79.861 144 26 3 417 558 423838895 423839037 4.570000e-18 102.0
4 TraesCS2B01G176100 chr2B 80.769 104 18 2 11 113 673052964 673053066 2.140000e-11 80.5
5 TraesCS2B01G176100 chr2D 92.579 1671 80 14 892 2548 99660913 99659273 0.000000e+00 2359.0
6 TraesCS2B01G176100 chr2D 94.553 257 11 3 410 666 99661914 99661661 6.740000e-106 394.0
7 TraesCS2B01G176100 chr2D 91.964 224 14 3 684 903 99661284 99661061 6.980000e-81 311.0
8 TraesCS2B01G176100 chr2D 83.051 118 15 4 441 555 399433325 399433210 4.570000e-18 102.0
9 TraesCS2B01G176100 chr2D 79.870 154 17 8 433 579 615146722 615146576 1.640000e-17 100.0
10 TraesCS2B01G176100 chr3D 81.046 1472 228 30 1023 2479 565819740 565821175 0.000000e+00 1125.0
11 TraesCS2B01G176100 chr5B 90.049 412 38 3 1 409 51033249 51032838 4.920000e-147 531.0
12 TraesCS2B01G176100 chr5B 82.620 397 53 13 21 409 446292299 446292687 1.150000e-88 337.0
13 TraesCS2B01G176100 chr1D 89.538 411 41 2 1 409 18988288 18988698 1.070000e-143 520.0
14 TraesCS2B01G176100 chr3A 88.783 419 35 6 3 409 456716923 456717341 1.070000e-138 503.0
15 TraesCS2B01G176100 chr7A 87.282 401 46 5 11 409 681815724 681816121 1.100000e-123 453.0
16 TraesCS2B01G176100 chr7A 75.610 369 71 12 1037 1395 671305702 671306061 5.750000e-37 165.0
17 TraesCS2B01G176100 chrUn 83.127 403 59 4 8 409 60176278 60175884 2.460000e-95 359.0
18 TraesCS2B01G176100 chrUn 83.127 403 59 4 8 409 233395747 233395353 2.460000e-95 359.0
19 TraesCS2B01G176100 chr2A 87.137 241 24 4 2298 2532 98880441 98880202 1.530000e-67 267.0
20 TraesCS2B01G176100 chr4B 78.497 386 71 9 1043 1419 64775100 64774718 2.580000e-60 243.0
21 TraesCS2B01G176100 chr4A 77.662 385 74 9 1041 1416 554853390 554853771 9.350000e-55 224.0
22 TraesCS2B01G176100 chr7D 92.708 96 7 0 1037 1132 579570480 579570575 3.480000e-29 139.0
23 TraesCS2B01G176100 chr7D 80.233 86 16 1 479 563 63486050 63485965 2.160000e-06 63.9
24 TraesCS2B01G176100 chr7B 84.524 84 13 0 1049 1132 672549232 672549149 1.660000e-12 84.2
25 TraesCS2B01G176100 chr5D 96.970 33 1 0 1918 1950 366781106 366781074 3.610000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G176100 chr2B 151101885 151104481 2596 False 4796.000000 4796 100.000 1 2597 1 chr2B.!!$F1 2596
1 TraesCS2B01G176100 chr2D 99659273 99661914 2641 True 1021.333333 2359 93.032 410 2548 3 chr2D.!!$R3 2138
2 TraesCS2B01G176100 chr3D 565819740 565821175 1435 False 1125.000000 1125 81.046 1023 2479 1 chr3D.!!$F1 1456

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
89 90 0.033504 GGGTGTCGTGCTCTTCTTGA 59.966 55.0 0.0 0.0 0.0 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1963 2506 0.232303 GCAACCTCGTTGAAGTCGTG 59.768 55.0 8.65 0.0 45.28 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 3.431725 GGGGTTGCCGAGCGAAAG 61.432 66.667 0.00 0.00 0.00 2.62
47 48 1.871772 CGAAAGCTCTGTGCCTTGG 59.128 57.895 0.00 0.00 44.23 3.61
48 49 1.583477 GAAAGCTCTGTGCCTTGGC 59.417 57.895 4.43 4.43 44.23 4.52
49 50 2.192608 GAAAGCTCTGTGCCTTGGCG 62.193 60.000 7.18 0.00 44.23 5.69
81 82 4.722700 GCCCATGGGTGTCGTGCT 62.723 66.667 31.58 0.00 37.65 4.40
82 83 2.436646 CCCATGGGTGTCGTGCTC 60.437 66.667 23.93 0.00 0.00 4.26
83 84 2.665000 CCATGGGTGTCGTGCTCT 59.335 61.111 2.85 0.00 0.00 4.09
84 85 1.003355 CCATGGGTGTCGTGCTCTT 60.003 57.895 2.85 0.00 0.00 2.85
85 86 1.021390 CCATGGGTGTCGTGCTCTTC 61.021 60.000 2.85 0.00 0.00 2.87
86 87 0.036952 CATGGGTGTCGTGCTCTTCT 60.037 55.000 0.00 0.00 0.00 2.85
87 88 0.687354 ATGGGTGTCGTGCTCTTCTT 59.313 50.000 0.00 0.00 0.00 2.52
88 89 0.249868 TGGGTGTCGTGCTCTTCTTG 60.250 55.000 0.00 0.00 0.00 3.02
89 90 0.033504 GGGTGTCGTGCTCTTCTTGA 59.966 55.000 0.00 0.00 0.00 3.02
90 91 1.540363 GGGTGTCGTGCTCTTCTTGAA 60.540 52.381 0.00 0.00 0.00 2.69
91 92 1.795286 GGTGTCGTGCTCTTCTTGAAG 59.205 52.381 4.13 4.13 0.00 3.02
92 93 2.545952 GGTGTCGTGCTCTTCTTGAAGA 60.546 50.000 11.90 11.90 0.00 2.87
93 94 2.473235 GTGTCGTGCTCTTCTTGAAGAC 59.527 50.000 8.80 7.28 0.00 3.01
94 95 1.716581 GTCGTGCTCTTCTTGAAGACG 59.283 52.381 8.80 11.46 33.28 4.18
95 96 1.337071 TCGTGCTCTTCTTGAAGACGT 59.663 47.619 16.78 0.00 33.56 4.34
96 97 1.716581 CGTGCTCTTCTTGAAGACGTC 59.283 52.381 7.70 7.70 0.00 4.34
97 98 1.716581 GTGCTCTTCTTGAAGACGTCG 59.283 52.381 10.46 0.00 0.00 5.12
98 99 1.337071 TGCTCTTCTTGAAGACGTCGT 59.663 47.619 10.46 6.85 0.00 4.34
99 100 1.980156 GCTCTTCTTGAAGACGTCGTC 59.020 52.381 22.45 22.45 0.00 4.20
100 101 2.235020 CTCTTCTTGAAGACGTCGTCG 58.765 52.381 23.32 12.34 37.67 5.12
110 111 4.937781 CGTCGTCGTGGTTCTTCT 57.062 55.556 0.00 0.00 0.00 2.85
111 112 2.709631 CGTCGTCGTGGTTCTTCTC 58.290 57.895 0.00 0.00 0.00 2.87
112 113 0.237761 CGTCGTCGTGGTTCTTCTCT 59.762 55.000 0.00 0.00 0.00 3.10
113 114 1.334779 CGTCGTCGTGGTTCTTCTCTT 60.335 52.381 0.00 0.00 0.00 2.85
114 115 2.740452 GTCGTCGTGGTTCTTCTCTTT 58.260 47.619 0.00 0.00 0.00 2.52
115 116 2.471743 GTCGTCGTGGTTCTTCTCTTTG 59.528 50.000 0.00 0.00 0.00 2.77
116 117 2.100252 TCGTCGTGGTTCTTCTCTTTGT 59.900 45.455 0.00 0.00 0.00 2.83
117 118 3.316029 TCGTCGTGGTTCTTCTCTTTGTA 59.684 43.478 0.00 0.00 0.00 2.41
118 119 4.022589 TCGTCGTGGTTCTTCTCTTTGTAT 60.023 41.667 0.00 0.00 0.00 2.29
119 120 4.323868 CGTCGTGGTTCTTCTCTTTGTATC 59.676 45.833 0.00 0.00 0.00 2.24
120 121 5.227908 GTCGTGGTTCTTCTCTTTGTATCA 58.772 41.667 0.00 0.00 0.00 2.15
121 122 5.346281 GTCGTGGTTCTTCTCTTTGTATCAG 59.654 44.000 0.00 0.00 0.00 2.90
122 123 4.627467 CGTGGTTCTTCTCTTTGTATCAGG 59.373 45.833 0.00 0.00 0.00 3.86
123 124 4.938226 GTGGTTCTTCTCTTTGTATCAGGG 59.062 45.833 0.00 0.00 0.00 4.45
124 125 3.942115 GGTTCTTCTCTTTGTATCAGGGC 59.058 47.826 0.00 0.00 0.00 5.19
125 126 3.914426 TCTTCTCTTTGTATCAGGGCC 57.086 47.619 0.00 0.00 0.00 5.80
126 127 3.454858 TCTTCTCTTTGTATCAGGGCCT 58.545 45.455 0.00 0.00 0.00 5.19
127 128 3.452627 TCTTCTCTTTGTATCAGGGCCTC 59.547 47.826 0.95 0.00 0.00 4.70
128 129 1.757118 TCTCTTTGTATCAGGGCCTCG 59.243 52.381 0.95 0.00 0.00 4.63
129 130 0.830648 TCTTTGTATCAGGGCCTCGG 59.169 55.000 0.95 0.00 0.00 4.63
130 131 0.179045 CTTTGTATCAGGGCCTCGGG 60.179 60.000 0.95 0.00 0.00 5.14
131 132 0.912487 TTTGTATCAGGGCCTCGGGT 60.912 55.000 0.95 0.00 0.00 5.28
132 133 1.622607 TTGTATCAGGGCCTCGGGTG 61.623 60.000 0.95 0.00 0.00 4.61
133 134 1.760875 GTATCAGGGCCTCGGGTGA 60.761 63.158 0.95 0.00 0.00 4.02
134 135 1.002403 TATCAGGGCCTCGGGTGAA 59.998 57.895 0.95 0.00 0.00 3.18
135 136 1.048724 TATCAGGGCCTCGGGTGAAG 61.049 60.000 0.95 0.00 0.00 3.02
136 137 2.822643 ATCAGGGCCTCGGGTGAAGA 62.823 60.000 0.95 0.00 0.00 2.87
137 138 2.041265 AGGGCCTCGGGTGAAGAT 59.959 61.111 0.00 0.00 0.00 2.40
138 139 2.066999 AGGGCCTCGGGTGAAGATC 61.067 63.158 0.00 0.00 0.00 2.75
139 140 2.066999 GGGCCTCGGGTGAAGATCT 61.067 63.158 0.84 0.00 0.00 2.75
140 141 1.627297 GGGCCTCGGGTGAAGATCTT 61.627 60.000 7.95 7.95 0.00 2.40
141 142 0.253327 GGCCTCGGGTGAAGATCTTT 59.747 55.000 9.87 0.00 0.00 2.52
142 143 1.485066 GGCCTCGGGTGAAGATCTTTA 59.515 52.381 9.87 1.94 0.00 1.85
143 144 2.104963 GGCCTCGGGTGAAGATCTTTAT 59.895 50.000 9.87 0.00 0.00 1.40
144 145 3.394719 GCCTCGGGTGAAGATCTTTATC 58.605 50.000 9.87 5.61 0.00 1.75
145 146 3.804063 GCCTCGGGTGAAGATCTTTATCC 60.804 52.174 17.64 17.64 31.98 2.59
147 148 2.755650 CGGGTGAAGATCTTTATCCGG 58.244 52.381 33.42 22.47 45.52 5.14
148 149 2.102588 CGGGTGAAGATCTTTATCCGGT 59.897 50.000 33.42 1.49 45.52 5.28
149 150 3.467803 GGGTGAAGATCTTTATCCGGTG 58.532 50.000 13.34 0.00 31.98 4.94
150 151 3.118371 GGGTGAAGATCTTTATCCGGTGT 60.118 47.826 13.34 0.00 31.98 4.16
151 152 3.871594 GGTGAAGATCTTTATCCGGTGTG 59.128 47.826 9.87 0.00 31.98 3.82
152 153 3.871594 GTGAAGATCTTTATCCGGTGTGG 59.128 47.826 9.87 0.00 40.09 4.17
160 161 2.118732 TCCGGTGTGGACTAGGCA 59.881 61.111 0.00 0.00 43.74 4.75
161 162 1.534476 TCCGGTGTGGACTAGGCAA 60.534 57.895 0.00 0.00 43.74 4.52
162 163 1.375523 CCGGTGTGGACTAGGCAAC 60.376 63.158 0.00 0.00 42.00 4.17
163 164 1.736645 CGGTGTGGACTAGGCAACG 60.737 63.158 0.00 0.46 46.39 4.10
164 165 1.375523 GGTGTGGACTAGGCAACGG 60.376 63.158 0.00 0.00 46.39 4.44
165 166 2.033194 GTGTGGACTAGGCAACGGC 61.033 63.158 0.00 0.00 46.39 5.68
166 167 2.813908 GTGGACTAGGCAACGGCG 60.814 66.667 4.80 4.80 46.39 6.46
167 168 2.992689 TGGACTAGGCAACGGCGA 60.993 61.111 16.62 0.00 46.39 5.54
168 169 2.508663 GGACTAGGCAACGGCGAC 60.509 66.667 16.62 1.71 46.39 5.19
188 189 2.997485 GCTCTGCGTCATTTTTCCTT 57.003 45.000 0.00 0.00 0.00 3.36
189 190 3.288809 GCTCTGCGTCATTTTTCCTTT 57.711 42.857 0.00 0.00 0.00 3.11
190 191 3.642705 GCTCTGCGTCATTTTTCCTTTT 58.357 40.909 0.00 0.00 0.00 2.27
191 192 3.426525 GCTCTGCGTCATTTTTCCTTTTG 59.573 43.478 0.00 0.00 0.00 2.44
192 193 4.792704 GCTCTGCGTCATTTTTCCTTTTGA 60.793 41.667 0.00 0.00 0.00 2.69
193 194 4.858935 TCTGCGTCATTTTTCCTTTTGAG 58.141 39.130 0.00 0.00 0.00 3.02
194 195 3.976169 TGCGTCATTTTTCCTTTTGAGG 58.024 40.909 0.00 0.00 0.00 3.86
195 196 3.634448 TGCGTCATTTTTCCTTTTGAGGA 59.366 39.130 0.00 0.00 35.93 3.71
196 197 3.981416 GCGTCATTTTTCCTTTTGAGGAC 59.019 43.478 0.00 0.00 37.76 3.85
197 198 4.219033 CGTCATTTTTCCTTTTGAGGACG 58.781 43.478 0.00 0.00 37.76 4.79
198 199 4.261031 CGTCATTTTTCCTTTTGAGGACGT 60.261 41.667 0.00 0.00 40.27 4.34
199 200 5.588240 GTCATTTTTCCTTTTGAGGACGTT 58.412 37.500 0.00 0.00 37.76 3.99
200 201 5.458779 GTCATTTTTCCTTTTGAGGACGTTG 59.541 40.000 0.00 0.00 37.76 4.10
201 202 5.126384 TCATTTTTCCTTTTGAGGACGTTGT 59.874 36.000 0.00 0.00 37.76 3.32
202 203 4.625972 TTTTCCTTTTGAGGACGTTGTC 57.374 40.909 0.00 0.00 37.76 3.18
203 204 1.860676 TCCTTTTGAGGACGTTGTCG 58.139 50.000 0.00 0.00 43.34 4.35
215 216 1.779569 CGTTGTCGTGGAGTTTAGCT 58.220 50.000 0.00 0.00 0.00 3.32
216 217 1.455786 CGTTGTCGTGGAGTTTAGCTG 59.544 52.381 0.00 0.00 0.00 4.24
217 218 2.480845 GTTGTCGTGGAGTTTAGCTGT 58.519 47.619 0.00 0.00 0.00 4.40
218 219 2.148916 TGTCGTGGAGTTTAGCTGTG 57.851 50.000 0.00 0.00 0.00 3.66
219 220 0.790814 GTCGTGGAGTTTAGCTGTGC 59.209 55.000 0.00 0.00 0.00 4.57
220 221 0.679505 TCGTGGAGTTTAGCTGTGCT 59.320 50.000 0.00 0.00 43.41 4.40
221 222 1.890489 TCGTGGAGTTTAGCTGTGCTA 59.110 47.619 0.00 0.00 40.44 3.49
222 223 2.094700 TCGTGGAGTTTAGCTGTGCTAG 60.095 50.000 0.00 0.00 42.34 3.42
223 224 2.094700 CGTGGAGTTTAGCTGTGCTAGA 60.095 50.000 0.00 0.00 42.34 2.43
224 225 3.429547 CGTGGAGTTTAGCTGTGCTAGAT 60.430 47.826 0.00 0.00 42.34 1.98
225 226 4.116238 GTGGAGTTTAGCTGTGCTAGATC 58.884 47.826 0.00 0.00 42.34 2.75
226 227 3.181486 TGGAGTTTAGCTGTGCTAGATCG 60.181 47.826 0.00 0.00 42.34 3.69
227 228 3.181485 GGAGTTTAGCTGTGCTAGATCGT 60.181 47.826 0.00 0.00 42.34 3.73
228 229 4.036498 GGAGTTTAGCTGTGCTAGATCGTA 59.964 45.833 0.00 0.00 42.34 3.43
229 230 5.176407 AGTTTAGCTGTGCTAGATCGTAG 57.824 43.478 0.00 0.00 42.34 3.51
230 231 4.641094 AGTTTAGCTGTGCTAGATCGTAGT 59.359 41.667 0.00 0.00 42.34 2.73
231 232 4.553756 TTAGCTGTGCTAGATCGTAGTG 57.446 45.455 0.00 0.00 42.34 2.74
232 233 2.370349 AGCTGTGCTAGATCGTAGTGT 58.630 47.619 0.00 0.00 36.99 3.55
233 234 2.098280 AGCTGTGCTAGATCGTAGTGTG 59.902 50.000 0.00 0.00 36.99 3.82
234 235 2.796383 GCTGTGCTAGATCGTAGTGTGG 60.796 54.545 0.00 0.00 0.00 4.17
235 236 1.749063 TGTGCTAGATCGTAGTGTGGG 59.251 52.381 0.00 0.00 0.00 4.61
236 237 1.067212 GTGCTAGATCGTAGTGTGGGG 59.933 57.143 0.00 0.00 0.00 4.96
237 238 1.341679 TGCTAGATCGTAGTGTGGGGT 60.342 52.381 0.00 0.00 0.00 4.95
238 239 1.067212 GCTAGATCGTAGTGTGGGGTG 59.933 57.143 0.00 0.00 0.00 4.61
239 240 2.376109 CTAGATCGTAGTGTGGGGTGT 58.624 52.381 0.00 0.00 0.00 4.16
240 241 0.895530 AGATCGTAGTGTGGGGTGTG 59.104 55.000 0.00 0.00 0.00 3.82
241 242 0.606604 GATCGTAGTGTGGGGTGTGT 59.393 55.000 0.00 0.00 0.00 3.72
242 243 0.606604 ATCGTAGTGTGGGGTGTGTC 59.393 55.000 0.00 0.00 0.00 3.67
243 244 0.468585 TCGTAGTGTGGGGTGTGTCT 60.469 55.000 0.00 0.00 0.00 3.41
244 245 1.202915 TCGTAGTGTGGGGTGTGTCTA 60.203 52.381 0.00 0.00 0.00 2.59
245 246 1.201647 CGTAGTGTGGGGTGTGTCTAG 59.798 57.143 0.00 0.00 0.00 2.43
246 247 2.245582 GTAGTGTGGGGTGTGTCTAGT 58.754 52.381 0.00 0.00 0.00 2.57
247 248 1.802553 AGTGTGGGGTGTGTCTAGTT 58.197 50.000 0.00 0.00 0.00 2.24
248 249 1.692519 AGTGTGGGGTGTGTCTAGTTC 59.307 52.381 0.00 0.00 0.00 3.01
249 250 1.692519 GTGTGGGGTGTGTCTAGTTCT 59.307 52.381 0.00 0.00 0.00 3.01
250 251 1.968493 TGTGGGGTGTGTCTAGTTCTC 59.032 52.381 0.00 0.00 0.00 2.87
251 252 1.275573 GTGGGGTGTGTCTAGTTCTCC 59.724 57.143 0.00 0.00 0.00 3.71
252 253 0.903236 GGGGTGTGTCTAGTTCTCCC 59.097 60.000 10.74 10.74 35.07 4.30
253 254 0.531200 GGGTGTGTCTAGTTCTCCCG 59.469 60.000 0.00 0.00 0.00 5.14
254 255 0.531200 GGTGTGTCTAGTTCTCCCGG 59.469 60.000 0.00 0.00 0.00 5.73
255 256 1.254954 GTGTGTCTAGTTCTCCCGGT 58.745 55.000 0.00 0.00 0.00 5.28
256 257 1.067776 GTGTGTCTAGTTCTCCCGGTG 60.068 57.143 0.00 0.00 0.00 4.94
257 258 0.108756 GTGTCTAGTTCTCCCGGTGC 60.109 60.000 0.00 0.00 0.00 5.01
258 259 1.255667 TGTCTAGTTCTCCCGGTGCC 61.256 60.000 0.00 0.00 0.00 5.01
259 260 2.050350 TCTAGTTCTCCCGGTGCCG 61.050 63.158 0.00 3.25 39.44 5.69
260 261 2.283388 TAGTTCTCCCGGTGCCGT 60.283 61.111 9.90 0.00 37.81 5.68
261 262 1.885163 CTAGTTCTCCCGGTGCCGTT 61.885 60.000 9.90 0.00 37.81 4.44
262 263 1.474332 TAGTTCTCCCGGTGCCGTTT 61.474 55.000 9.90 0.00 37.81 3.60
263 264 2.281208 TTCTCCCGGTGCCGTTTG 60.281 61.111 9.90 0.00 37.81 2.93
264 265 3.109592 TTCTCCCGGTGCCGTTTGT 62.110 57.895 9.90 0.00 37.81 2.83
265 266 2.593436 CTCCCGGTGCCGTTTGTT 60.593 61.111 9.90 0.00 37.81 2.83
266 267 2.902846 TCCCGGTGCCGTTTGTTG 60.903 61.111 9.90 0.00 37.81 3.33
267 268 3.972276 CCCGGTGCCGTTTGTTGG 61.972 66.667 9.90 0.00 37.81 3.77
268 269 3.213402 CCGGTGCCGTTTGTTGGT 61.213 61.111 9.90 0.00 37.81 3.67
269 270 2.025441 CGGTGCCGTTTGTTGGTG 59.975 61.111 1.93 0.00 34.35 4.17
270 271 2.415426 GGTGCCGTTTGTTGGTGG 59.585 61.111 0.00 0.00 0.00 4.61
271 272 2.419739 GGTGCCGTTTGTTGGTGGT 61.420 57.895 0.00 0.00 0.00 4.16
272 273 1.226831 GTGCCGTTTGTTGGTGGTG 60.227 57.895 0.00 0.00 0.00 4.17
273 274 2.415426 GCCGTTTGTTGGTGGTGG 59.585 61.111 0.00 0.00 0.00 4.61
274 275 2.419739 GCCGTTTGTTGGTGGTGGT 61.420 57.895 0.00 0.00 0.00 4.16
275 276 1.731093 CCGTTTGTTGGTGGTGGTC 59.269 57.895 0.00 0.00 0.00 4.02
276 277 1.353804 CGTTTGTTGGTGGTGGTCG 59.646 57.895 0.00 0.00 0.00 4.79
277 278 1.370587 CGTTTGTTGGTGGTGGTCGT 61.371 55.000 0.00 0.00 0.00 4.34
278 279 0.099791 GTTTGTTGGTGGTGGTCGTG 59.900 55.000 0.00 0.00 0.00 4.35
279 280 0.322636 TTTGTTGGTGGTGGTCGTGT 60.323 50.000 0.00 0.00 0.00 4.49
280 281 1.027255 TTGTTGGTGGTGGTCGTGTG 61.027 55.000 0.00 0.00 0.00 3.82
281 282 2.515057 TTGGTGGTGGTCGTGTGC 60.515 61.111 0.00 0.00 0.00 4.57
282 283 4.901123 TGGTGGTGGTCGTGTGCG 62.901 66.667 0.00 0.00 39.92 5.34
283 284 4.903010 GGTGGTGGTCGTGTGCGT 62.903 66.667 0.00 0.00 39.49 5.24
284 285 2.893404 GTGGTGGTCGTGTGCGTT 60.893 61.111 0.00 0.00 39.49 4.84
285 286 2.586635 TGGTGGTCGTGTGCGTTC 60.587 61.111 0.00 0.00 39.49 3.95
286 287 2.279918 GGTGGTCGTGTGCGTTCT 60.280 61.111 0.00 0.00 39.49 3.01
287 288 2.594962 GGTGGTCGTGTGCGTTCTG 61.595 63.158 0.00 0.00 39.49 3.02
288 289 2.964925 TGGTCGTGTGCGTTCTGC 60.965 61.111 0.00 0.00 46.70 4.26
297 298 3.337889 GCGTTCTGCGTGTGCTGA 61.338 61.111 0.00 0.00 45.87 4.26
298 299 2.671177 GCGTTCTGCGTGTGCTGAT 61.671 57.895 0.00 0.00 46.60 2.90
299 300 1.862123 CGTTCTGCGTGTGCTGATT 59.138 52.632 0.00 0.00 46.60 2.57
300 301 1.067693 CGTTCTGCGTGTGCTGATTA 58.932 50.000 0.00 0.00 46.60 1.75
301 302 1.660607 CGTTCTGCGTGTGCTGATTAT 59.339 47.619 0.00 0.00 46.60 1.28
302 303 2.285256 CGTTCTGCGTGTGCTGATTATC 60.285 50.000 0.00 0.00 46.60 1.75
303 304 2.932614 GTTCTGCGTGTGCTGATTATCT 59.067 45.455 0.00 0.00 46.60 1.98
304 305 3.251479 TCTGCGTGTGCTGATTATCTT 57.749 42.857 0.00 0.00 43.17 2.40
305 306 4.385358 TCTGCGTGTGCTGATTATCTTA 57.615 40.909 0.00 0.00 43.17 2.10
306 307 4.363138 TCTGCGTGTGCTGATTATCTTAG 58.637 43.478 0.00 0.00 43.17 2.18
307 308 3.457234 TGCGTGTGCTGATTATCTTAGG 58.543 45.455 0.00 0.00 43.34 2.69
308 309 3.132111 TGCGTGTGCTGATTATCTTAGGA 59.868 43.478 0.00 0.00 43.34 2.94
309 310 4.202253 TGCGTGTGCTGATTATCTTAGGAT 60.202 41.667 0.00 0.00 43.34 3.24
310 311 4.387256 GCGTGTGCTGATTATCTTAGGATC 59.613 45.833 0.00 0.00 38.39 3.36
311 312 4.618912 CGTGTGCTGATTATCTTAGGATCG 59.381 45.833 0.00 0.00 33.71 3.69
312 313 4.926238 GTGTGCTGATTATCTTAGGATCGG 59.074 45.833 0.00 0.00 33.71 4.18
314 315 4.464069 GCTGATTATCTTAGGATCGGCT 57.536 45.455 13.56 0.00 44.74 5.52
315 316 4.826556 GCTGATTATCTTAGGATCGGCTT 58.173 43.478 13.56 0.00 44.74 4.35
316 317 5.241662 GCTGATTATCTTAGGATCGGCTTT 58.758 41.667 13.56 0.00 44.74 3.51
317 318 5.121454 GCTGATTATCTTAGGATCGGCTTTG 59.879 44.000 13.56 0.00 44.74 2.77
318 319 6.174720 TGATTATCTTAGGATCGGCTTTGT 57.825 37.500 0.00 0.00 33.71 2.83
319 320 6.591935 TGATTATCTTAGGATCGGCTTTGTT 58.408 36.000 0.00 0.00 33.71 2.83
320 321 7.732025 TGATTATCTTAGGATCGGCTTTGTTA 58.268 34.615 0.00 0.00 33.71 2.41
321 322 7.872993 TGATTATCTTAGGATCGGCTTTGTTAG 59.127 37.037 0.00 0.00 33.71 2.34
322 323 5.871396 ATCTTAGGATCGGCTTTGTTAGA 57.129 39.130 0.00 0.00 0.00 2.10
323 324 5.263968 TCTTAGGATCGGCTTTGTTAGAG 57.736 43.478 0.00 0.00 0.00 2.43
324 325 4.954202 TCTTAGGATCGGCTTTGTTAGAGA 59.046 41.667 0.00 0.00 0.00 3.10
325 326 3.810310 AGGATCGGCTTTGTTAGAGAG 57.190 47.619 0.00 0.00 0.00 3.20
326 327 3.100671 AGGATCGGCTTTGTTAGAGAGT 58.899 45.455 0.00 0.00 0.00 3.24
327 328 3.515901 AGGATCGGCTTTGTTAGAGAGTT 59.484 43.478 0.00 0.00 0.00 3.01
328 329 4.710375 AGGATCGGCTTTGTTAGAGAGTTA 59.290 41.667 0.00 0.00 0.00 2.24
329 330 4.804665 GGATCGGCTTTGTTAGAGAGTTAC 59.195 45.833 0.00 0.00 0.00 2.50
330 331 3.829948 TCGGCTTTGTTAGAGAGTTACG 58.170 45.455 0.00 0.00 0.00 3.18
331 332 3.254166 TCGGCTTTGTTAGAGAGTTACGT 59.746 43.478 0.00 0.00 0.00 3.57
332 333 3.607209 CGGCTTTGTTAGAGAGTTACGTC 59.393 47.826 0.00 0.00 0.00 4.34
333 334 4.553323 GGCTTTGTTAGAGAGTTACGTCA 58.447 43.478 0.00 0.00 0.00 4.35
334 335 4.385146 GGCTTTGTTAGAGAGTTACGTCAC 59.615 45.833 0.00 0.00 0.00 3.67
335 336 4.385146 GCTTTGTTAGAGAGTTACGTCACC 59.615 45.833 0.00 0.00 0.00 4.02
336 337 5.518848 TTTGTTAGAGAGTTACGTCACCA 57.481 39.130 0.00 0.00 0.00 4.17
337 338 5.717078 TTGTTAGAGAGTTACGTCACCAT 57.283 39.130 0.00 0.00 0.00 3.55
338 339 5.306532 TGTTAGAGAGTTACGTCACCATC 57.693 43.478 0.00 0.00 0.00 3.51
339 340 5.008331 TGTTAGAGAGTTACGTCACCATCT 58.992 41.667 0.00 0.01 0.00 2.90
340 341 5.475909 TGTTAGAGAGTTACGTCACCATCTT 59.524 40.000 9.06 0.00 0.00 2.40
341 342 4.442375 AGAGAGTTACGTCACCATCTTG 57.558 45.455 0.00 0.00 0.00 3.02
342 343 3.827302 AGAGAGTTACGTCACCATCTTGT 59.173 43.478 0.00 0.00 0.00 3.16
343 344 5.008331 AGAGAGTTACGTCACCATCTTGTA 58.992 41.667 0.00 0.00 0.00 2.41
344 345 5.652891 AGAGAGTTACGTCACCATCTTGTAT 59.347 40.000 0.00 0.00 0.00 2.29
345 346 5.892568 AGAGTTACGTCACCATCTTGTATC 58.107 41.667 0.00 0.00 0.00 2.24
346 347 4.669318 AGTTACGTCACCATCTTGTATCG 58.331 43.478 0.00 0.00 0.00 2.92
347 348 1.922570 ACGTCACCATCTTGTATCGC 58.077 50.000 0.00 0.00 0.00 4.58
348 349 1.476891 ACGTCACCATCTTGTATCGCT 59.523 47.619 0.00 0.00 0.00 4.93
349 350 2.120232 CGTCACCATCTTGTATCGCTC 58.880 52.381 0.00 0.00 0.00 5.03
350 351 2.120232 GTCACCATCTTGTATCGCTCG 58.880 52.381 0.00 0.00 0.00 5.03
351 352 1.067060 TCACCATCTTGTATCGCTCGG 59.933 52.381 0.00 0.00 0.00 4.63
352 353 0.249489 ACCATCTTGTATCGCTCGGC 60.249 55.000 0.00 0.00 0.00 5.54
353 354 0.946221 CCATCTTGTATCGCTCGGCC 60.946 60.000 0.00 0.00 0.00 6.13
354 355 1.007271 ATCTTGTATCGCTCGGCCG 60.007 57.895 22.12 22.12 0.00 6.13
355 356 1.735376 ATCTTGTATCGCTCGGCCGT 61.735 55.000 27.15 7.91 0.00 5.68
356 357 2.202690 TTGTATCGCTCGGCCGTG 60.203 61.111 27.15 24.66 0.00 4.94
357 358 2.884087 CTTGTATCGCTCGGCCGTGT 62.884 60.000 27.15 9.62 0.00 4.49
358 359 1.655885 TTGTATCGCTCGGCCGTGTA 61.656 55.000 27.15 15.51 0.00 2.90
359 360 1.656569 GTATCGCTCGGCCGTGTAC 60.657 63.158 27.15 16.78 0.00 2.90
360 361 1.820906 TATCGCTCGGCCGTGTACT 60.821 57.895 27.15 13.16 0.00 2.73
361 362 1.378882 TATCGCTCGGCCGTGTACTT 61.379 55.000 27.15 11.57 0.00 2.24
362 363 2.884087 ATCGCTCGGCCGTGTACTTG 62.884 60.000 27.15 11.47 0.00 3.16
363 364 2.048503 GCTCGGCCGTGTACTTGT 60.049 61.111 27.15 0.00 0.00 3.16
364 365 1.666872 GCTCGGCCGTGTACTTGTT 60.667 57.895 27.15 0.00 0.00 2.83
365 366 1.623973 GCTCGGCCGTGTACTTGTTC 61.624 60.000 27.15 3.09 0.00 3.18
366 367 1.342082 CTCGGCCGTGTACTTGTTCG 61.342 60.000 27.15 0.00 0.00 3.95
367 368 2.377310 CGGCCGTGTACTTGTTCGG 61.377 63.158 19.50 0.00 44.86 4.30
368 369 1.301165 GGCCGTGTACTTGTTCGGT 60.301 57.895 0.00 0.00 44.07 4.69
369 370 0.881600 GGCCGTGTACTTGTTCGGTT 60.882 55.000 0.00 0.00 44.07 4.44
370 371 0.233848 GCCGTGTACTTGTTCGGTTG 59.766 55.000 0.00 0.00 44.07 3.77
371 372 0.863144 CCGTGTACTTGTTCGGTTGG 59.137 55.000 0.00 0.00 38.45 3.77
372 373 1.574134 CGTGTACTTGTTCGGTTGGT 58.426 50.000 0.00 0.00 0.00 3.67
373 374 1.259507 CGTGTACTTGTTCGGTTGGTG 59.740 52.381 0.00 0.00 0.00 4.17
374 375 1.003223 GTGTACTTGTTCGGTTGGTGC 60.003 52.381 0.00 0.00 0.00 5.01
375 376 1.134340 TGTACTTGTTCGGTTGGTGCT 60.134 47.619 0.00 0.00 0.00 4.40
376 377 1.944709 GTACTTGTTCGGTTGGTGCTT 59.055 47.619 0.00 0.00 0.00 3.91
377 378 1.470051 ACTTGTTCGGTTGGTGCTTT 58.530 45.000 0.00 0.00 0.00 3.51
378 379 2.645802 ACTTGTTCGGTTGGTGCTTTA 58.354 42.857 0.00 0.00 0.00 1.85
379 380 3.219281 ACTTGTTCGGTTGGTGCTTTAT 58.781 40.909 0.00 0.00 0.00 1.40
380 381 3.252458 ACTTGTTCGGTTGGTGCTTTATC 59.748 43.478 0.00 0.00 0.00 1.75
381 382 3.134574 TGTTCGGTTGGTGCTTTATCT 57.865 42.857 0.00 0.00 0.00 1.98
382 383 4.274602 TGTTCGGTTGGTGCTTTATCTA 57.725 40.909 0.00 0.00 0.00 1.98
383 384 4.839121 TGTTCGGTTGGTGCTTTATCTAT 58.161 39.130 0.00 0.00 0.00 1.98
384 385 5.979993 TGTTCGGTTGGTGCTTTATCTATA 58.020 37.500 0.00 0.00 0.00 1.31
385 386 6.046593 TGTTCGGTTGGTGCTTTATCTATAG 58.953 40.000 0.00 0.00 0.00 1.31
386 387 6.127281 TGTTCGGTTGGTGCTTTATCTATAGA 60.127 38.462 4.57 4.57 0.00 1.98
387 388 6.085555 TCGGTTGGTGCTTTATCTATAGAG 57.914 41.667 8.70 0.00 0.00 2.43
388 389 4.686554 CGGTTGGTGCTTTATCTATAGAGC 59.313 45.833 8.70 6.67 39.97 4.09
389 390 4.686554 GGTTGGTGCTTTATCTATAGAGCG 59.313 45.833 8.70 0.00 41.78 5.03
390 391 4.521130 TGGTGCTTTATCTATAGAGCGG 57.479 45.455 8.70 0.28 41.78 5.52
391 392 3.258372 TGGTGCTTTATCTATAGAGCGGG 59.742 47.826 8.70 0.62 41.78 6.13
392 393 3.368531 GGTGCTTTATCTATAGAGCGGGG 60.369 52.174 8.70 0.00 41.78 5.73
393 394 2.233922 TGCTTTATCTATAGAGCGGGGC 59.766 50.000 8.70 9.01 41.78 5.80
394 395 2.735762 GCTTTATCTATAGAGCGGGGCG 60.736 54.545 8.70 0.00 31.99 6.13
395 396 2.502142 TTATCTATAGAGCGGGGCGA 57.498 50.000 8.70 0.00 0.00 5.54
396 397 2.502142 TATCTATAGAGCGGGGCGAA 57.498 50.000 8.70 0.00 0.00 4.70
397 398 1.629043 ATCTATAGAGCGGGGCGAAA 58.371 50.000 8.70 0.00 0.00 3.46
398 399 0.959553 TCTATAGAGCGGGGCGAAAG 59.040 55.000 0.00 0.00 0.00 2.62
428 429 7.778470 TTCGAAAAGTTGTGGCAAAATAATT 57.222 28.000 0.00 0.00 0.00 1.40
453 454 6.485171 AGTATCAGCACTCCCAAATACTTTT 58.515 36.000 0.00 0.00 28.19 2.27
514 515 1.823610 TCCGCAAATGCCATTTCATGA 59.176 42.857 0.00 0.00 37.91 3.07
658 659 4.701765 CTCTGCATAGCAACTCTACCAAT 58.298 43.478 0.00 0.00 38.41 3.16
666 667 7.095439 GCATAGCAACTCTACCAATCTTACATC 60.095 40.741 0.00 0.00 0.00 3.06
667 668 6.552445 AGCAACTCTACCAATCTTACATCT 57.448 37.500 0.00 0.00 0.00 2.90
670 671 6.037610 GCAACTCTACCAATCTTACATCTTGG 59.962 42.308 0.00 0.00 44.06 3.61
671 672 5.675538 ACTCTACCAATCTTACATCTTGGC 58.324 41.667 0.61 0.00 42.59 4.52
673 674 6.126652 ACTCTACCAATCTTACATCTTGGCAT 60.127 38.462 0.61 0.00 42.59 4.40
674 675 6.057533 TCTACCAATCTTACATCTTGGCATG 58.942 40.000 0.61 0.00 42.59 4.06
677 678 5.126061 ACCAATCTTACATCTTGGCATGTTC 59.874 40.000 0.00 0.00 42.59 3.18
678 679 5.125900 CCAATCTTACATCTTGGCATGTTCA 59.874 40.000 0.00 0.00 38.07 3.18
680 681 5.823209 TCTTACATCTTGGCATGTTCATG 57.177 39.130 8.26 8.26 38.07 3.07
681 682 5.499313 TCTTACATCTTGGCATGTTCATGA 58.501 37.500 15.74 0.00 38.07 3.07
682 683 5.355071 TCTTACATCTTGGCATGTTCATGAC 59.645 40.000 15.74 13.56 38.07 3.06
730 1091 4.959596 TCGTAACTGACCATACAGAGTC 57.040 45.455 0.00 0.00 40.63 3.36
731 1092 4.329392 TCGTAACTGACCATACAGAGTCA 58.671 43.478 0.00 0.00 40.61 3.41
735 1096 5.745312 AACTGACCATACAGAGTCAATCA 57.255 39.130 0.00 0.00 42.19 2.57
755 1116 4.067192 TCATTCGCATGGATATCACCAAG 58.933 43.478 4.83 0.00 43.47 3.61
762 1123 5.351458 GCATGGATATCACCAAGGAAAAAC 58.649 41.667 4.83 0.00 43.47 2.43
773 1134 5.234972 CACCAAGGAAAAACTCAATCTTTGC 59.765 40.000 0.00 0.00 31.14 3.68
840 1203 3.868835 ACACGACGATTTTACAAAGTGC 58.131 40.909 0.00 0.00 32.22 4.40
847 1210 8.497554 ACGACGATTTTACAAAGTGCTATTTTA 58.502 29.630 0.00 0.00 0.00 1.52
864 1227 7.120432 TGCTATTTTAAAATTTGGGGCATGTTC 59.880 33.333 18.14 0.00 0.00 3.18
867 1230 3.421919 AAAATTTGGGGCATGTTCAGG 57.578 42.857 0.00 0.00 0.00 3.86
869 1232 1.856629 ATTTGGGGCATGTTCAGGAG 58.143 50.000 0.00 0.00 0.00 3.69
886 1249 4.078336 TCAGGAGAGATGAGGGTCCTAAAT 60.078 45.833 0.00 0.00 37.32 1.40
916 1439 2.745886 CGAAGCTTCGTAAACTGACG 57.254 50.000 34.97 11.21 45.09 4.35
918 1441 1.126296 GAAGCTTCGTAAACTGACGGC 59.874 52.381 11.40 0.00 43.12 5.68
956 1479 1.404035 GGCCAAGGCTACAAATTACGG 59.596 52.381 11.40 0.00 41.60 4.02
990 1513 2.341846 AAACTGACCAACACATCCGT 57.658 45.000 0.00 0.00 0.00 4.69
1012 1535 2.456119 GCAACGATGGCTGGACTCG 61.456 63.158 0.00 0.00 38.34 4.18
1208 1734 1.520564 CCGATGAAATGCCGGACGA 60.521 57.895 5.05 0.00 45.58 4.20
1209 1735 0.880278 CCGATGAAATGCCGGACGAT 60.880 55.000 5.05 0.00 45.58 3.73
1211 1737 1.299541 GATGAAATGCCGGACGATGT 58.700 50.000 5.05 0.00 0.00 3.06
1499 2032 2.151202 AGGTTAGTCACAACAATGGCG 58.849 47.619 0.00 0.00 0.00 5.69
1503 2036 0.944386 AGTCACAACAATGGCGTCAC 59.056 50.000 0.00 0.00 0.00 3.67
1505 2038 0.943673 TCACAACAATGGCGTCACTG 59.056 50.000 0.00 0.00 0.00 3.66
1518 2051 2.118683 CGTCACTGCAATTTTGTGTGG 58.881 47.619 14.01 0.00 36.33 4.17
1520 2053 2.106566 TCACTGCAATTTTGTGTGGGT 58.893 42.857 14.01 0.00 36.33 4.51
1521 2054 3.067461 GTCACTGCAATTTTGTGTGGGTA 59.933 43.478 14.01 0.03 36.33 3.69
1522 2055 3.894427 TCACTGCAATTTTGTGTGGGTAT 59.106 39.130 14.01 0.00 36.33 2.73
1523 2056 3.989167 CACTGCAATTTTGTGTGGGTATG 59.011 43.478 0.00 0.00 34.04 2.39
1524 2057 3.006752 ACTGCAATTTTGTGTGGGTATGG 59.993 43.478 0.00 0.00 0.00 2.74
1525 2058 2.301296 TGCAATTTTGTGTGGGTATGGG 59.699 45.455 0.00 0.00 0.00 4.00
1526 2059 2.301583 GCAATTTTGTGTGGGTATGGGT 59.698 45.455 0.00 0.00 0.00 4.51
1527 2060 3.244387 GCAATTTTGTGTGGGTATGGGTT 60.244 43.478 0.00 0.00 0.00 4.11
1528 2061 4.565022 CAATTTTGTGTGGGTATGGGTTC 58.435 43.478 0.00 0.00 0.00 3.62
1555 2088 8.804688 TCTTAACCAAAATTAATTTCCACACG 57.195 30.769 13.68 1.86 0.00 4.49
1556 2089 8.630917 TCTTAACCAAAATTAATTTCCACACGA 58.369 29.630 13.68 3.91 0.00 4.35
1559 2092 7.227049 ACCAAAATTAATTTCCACACGAGAT 57.773 32.000 13.68 0.00 0.00 2.75
1560 2093 7.666623 ACCAAAATTAATTTCCACACGAGATT 58.333 30.769 13.68 0.00 0.00 2.40
1561 2094 8.798402 ACCAAAATTAATTTCCACACGAGATTA 58.202 29.630 13.68 0.00 0.00 1.75
1562 2095 9.289303 CCAAAATTAATTTCCACACGAGATTAG 57.711 33.333 13.68 0.00 31.25 1.73
1565 2098 9.667107 AAATTAATTTCCACACGAGATTAGAGA 57.333 29.630 7.64 0.00 31.25 3.10
1566 2099 9.667107 AATTAATTTCCACACGAGATTAGAGAA 57.333 29.630 0.00 0.00 31.25 2.87
1567 2100 9.838339 ATTAATTTCCACACGAGATTAGAGAAT 57.162 29.630 0.00 0.00 31.25 2.40
1568 2101 9.667107 TTAATTTCCACACGAGATTAGAGAATT 57.333 29.630 0.00 0.00 31.25 2.17
1570 2103 7.979444 TTTCCACACGAGATTAGAGAATTTT 57.021 32.000 0.00 0.00 0.00 1.82
1571 2104 7.979444 TTCCACACGAGATTAGAGAATTTTT 57.021 32.000 0.00 0.00 0.00 1.94
1627 2160 4.314440 GTGACGGAGCTGCCACCA 62.314 66.667 0.00 0.00 35.94 4.17
1708 2242 1.303236 CTGGACATGGCCACCGAAA 60.303 57.895 19.12 0.00 33.52 3.46
1723 2257 1.017701 CGAAACTACAACGGGCTCCC 61.018 60.000 0.00 0.00 0.00 4.30
2028 2571 0.032952 CTTTCCTGTGGGTCGTTCGA 59.967 55.000 0.00 0.00 0.00 3.71
2029 2572 0.464870 TTTCCTGTGGGTCGTTCGAA 59.535 50.000 0.00 0.00 0.00 3.71
2031 2574 2.027625 CCTGTGGGTCGTTCGAAGC 61.028 63.158 0.00 0.00 0.00 3.86
2211 2760 3.434053 GAGTATCTGCGAGGGGGTA 57.566 57.895 0.00 0.00 0.00 3.69
2241 2790 1.021920 GCAGCCCTTTCTTCGGAGAC 61.022 60.000 0.00 0.00 34.32 3.36
2316 2865 1.276140 TGGGTAAGATGGAACGGGGG 61.276 60.000 0.00 0.00 0.00 5.40
2470 3019 9.734984 TCGATCAGTTGGTAGATCATATACTAA 57.265 33.333 0.00 0.00 40.45 2.24
2530 3079 3.139077 CCGGTATATTCTGGCAAAGACC 58.861 50.000 0.00 0.00 33.46 3.85
2531 3080 3.433031 CCGGTATATTCTGGCAAAGACCA 60.433 47.826 0.00 0.00 38.29 4.02
2548 3097 6.944234 AAGACCAGAGGTTTAAGAAACAAG 57.056 37.500 4.60 0.00 43.15 3.16
2549 3098 6.248569 AGACCAGAGGTTTAAGAAACAAGA 57.751 37.500 4.60 0.00 43.15 3.02
2550 3099 6.292150 AGACCAGAGGTTTAAGAAACAAGAG 58.708 40.000 4.60 0.00 43.15 2.85
2551 3100 5.377478 ACCAGAGGTTTAAGAAACAAGAGG 58.623 41.667 4.60 3.71 43.15 3.69
2552 3101 5.104067 ACCAGAGGTTTAAGAAACAAGAGGT 60.104 40.000 4.60 4.24 43.15 3.85
2553 3102 6.100714 ACCAGAGGTTTAAGAAACAAGAGGTA 59.899 38.462 4.60 0.00 43.15 3.08
2554 3103 6.996282 CCAGAGGTTTAAGAAACAAGAGGTAA 59.004 38.462 4.60 0.00 43.15 2.85
2555 3104 7.665974 CCAGAGGTTTAAGAAACAAGAGGTAAT 59.334 37.037 4.60 0.00 43.15 1.89
2556 3105 9.720769 CAGAGGTTTAAGAAACAAGAGGTAATA 57.279 33.333 4.60 0.00 43.15 0.98
2557 3106 9.945904 AGAGGTTTAAGAAACAAGAGGTAATAG 57.054 33.333 4.60 0.00 43.15 1.73
2558 3107 8.563123 AGGTTTAAGAAACAAGAGGTAATAGC 57.437 34.615 4.60 0.00 43.15 2.97
2559 3108 8.161425 AGGTTTAAGAAACAAGAGGTAATAGCA 58.839 33.333 4.60 0.00 43.15 3.49
2560 3109 8.235226 GGTTTAAGAAACAAGAGGTAATAGCAC 58.765 37.037 4.60 0.00 43.15 4.40
2561 3110 9.000486 GTTTAAGAAACAAGAGGTAATAGCACT 58.000 33.333 0.00 0.00 41.04 4.40
2562 3111 8.547967 TTAAGAAACAAGAGGTAATAGCACTG 57.452 34.615 0.00 0.00 0.00 3.66
2563 3112 4.938226 AGAAACAAGAGGTAATAGCACTGC 59.062 41.667 0.00 0.00 0.00 4.40
2564 3113 3.981071 ACAAGAGGTAATAGCACTGCA 57.019 42.857 3.30 0.00 0.00 4.41
2565 3114 3.866651 ACAAGAGGTAATAGCACTGCAG 58.133 45.455 13.48 13.48 0.00 4.41
2566 3115 3.515502 ACAAGAGGTAATAGCACTGCAGA 59.484 43.478 23.35 0.00 0.00 4.26
2567 3116 4.163078 ACAAGAGGTAATAGCACTGCAGAT 59.837 41.667 23.35 8.42 0.00 2.90
2568 3117 4.599047 AGAGGTAATAGCACTGCAGATC 57.401 45.455 23.35 11.29 0.00 2.75
2569 3118 3.323403 AGAGGTAATAGCACTGCAGATCC 59.677 47.826 23.35 7.82 0.00 3.36
2570 3119 2.370189 AGGTAATAGCACTGCAGATCCC 59.630 50.000 23.35 7.14 0.00 3.85
2571 3120 2.370189 GGTAATAGCACTGCAGATCCCT 59.630 50.000 23.35 12.42 0.00 4.20
2572 3121 3.578716 GGTAATAGCACTGCAGATCCCTA 59.421 47.826 23.35 14.14 0.00 3.53
2573 3122 4.040461 GGTAATAGCACTGCAGATCCCTAA 59.960 45.833 23.35 0.00 0.00 2.69
2574 3123 4.778213 AATAGCACTGCAGATCCCTAAA 57.222 40.909 23.35 0.00 0.00 1.85
2575 3124 2.409948 AGCACTGCAGATCCCTAAAC 57.590 50.000 23.35 0.00 0.00 2.01
2576 3125 1.912043 AGCACTGCAGATCCCTAAACT 59.088 47.619 23.35 0.78 0.00 2.66
2577 3126 2.307098 AGCACTGCAGATCCCTAAACTT 59.693 45.455 23.35 0.00 0.00 2.66
2578 3127 2.421424 GCACTGCAGATCCCTAAACTTG 59.579 50.000 23.35 4.33 0.00 3.16
2579 3128 3.679389 CACTGCAGATCCCTAAACTTGT 58.321 45.455 23.35 0.00 0.00 3.16
2580 3129 3.686726 CACTGCAGATCCCTAAACTTGTC 59.313 47.826 23.35 0.00 0.00 3.18
2581 3130 3.327757 ACTGCAGATCCCTAAACTTGTCA 59.672 43.478 23.35 0.00 0.00 3.58
2582 3131 4.018960 ACTGCAGATCCCTAAACTTGTCAT 60.019 41.667 23.35 0.00 0.00 3.06
2583 3132 4.264253 TGCAGATCCCTAAACTTGTCATG 58.736 43.478 0.00 0.00 0.00 3.07
2584 3133 3.629398 GCAGATCCCTAAACTTGTCATGG 59.371 47.826 0.00 0.00 0.00 3.66
2585 3134 4.626287 GCAGATCCCTAAACTTGTCATGGA 60.626 45.833 0.00 0.00 0.00 3.41
2586 3135 5.121811 CAGATCCCTAAACTTGTCATGGAG 58.878 45.833 0.00 0.00 0.00 3.86
2587 3136 4.164988 AGATCCCTAAACTTGTCATGGAGG 59.835 45.833 0.00 0.00 0.00 4.30
2588 3137 3.256704 TCCCTAAACTTGTCATGGAGGT 58.743 45.455 0.00 0.00 0.00 3.85
2589 3138 3.009033 TCCCTAAACTTGTCATGGAGGTG 59.991 47.826 0.00 0.00 0.00 4.00
2590 3139 3.009033 CCCTAAACTTGTCATGGAGGTGA 59.991 47.826 0.00 0.00 0.00 4.02
2591 3140 4.324563 CCCTAAACTTGTCATGGAGGTGAT 60.325 45.833 0.00 0.00 0.00 3.06
2592 3141 4.637534 CCTAAACTTGTCATGGAGGTGATG 59.362 45.833 0.00 0.00 0.00 3.07
2593 3142 2.795231 ACTTGTCATGGAGGTGATGG 57.205 50.000 0.00 0.00 0.00 3.51
2594 3143 1.988107 ACTTGTCATGGAGGTGATGGT 59.012 47.619 0.00 0.00 0.00 3.55
2595 3144 2.376518 ACTTGTCATGGAGGTGATGGTT 59.623 45.455 0.00 0.00 0.00 3.67
2596 3145 3.181429 ACTTGTCATGGAGGTGATGGTTT 60.181 43.478 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.431725 CTTTCGCTCGGCAACCCC 61.432 66.667 0.00 0.00 0.00 4.95
18 19 4.103103 GCTTTCGCTCGGCAACCC 62.103 66.667 0.00 0.00 0.00 4.11
19 20 3.050275 AGCTTTCGCTCGGCAACC 61.050 61.111 0.00 0.00 45.15 3.77
28 29 1.208614 CAAGGCACAGAGCTTTCGC 59.791 57.895 0.00 0.00 41.05 4.70
29 30 1.871772 CCAAGGCACAGAGCTTTCG 59.128 57.895 0.00 0.00 41.05 3.46
30 31 1.583477 GCCAAGGCACAGAGCTTTC 59.417 57.895 6.14 0.00 41.05 2.62
31 32 2.263741 CGCCAAGGCACAGAGCTTT 61.264 57.895 12.19 0.00 44.21 3.51
32 33 2.670934 CGCCAAGGCACAGAGCTT 60.671 61.111 12.19 0.00 44.79 3.74
64 65 4.722700 AGCACGACACCCATGGGC 62.723 66.667 31.73 14.73 39.32 5.36
65 66 2.436646 GAGCACGACACCCATGGG 60.437 66.667 30.23 30.23 42.03 4.00
66 67 1.003355 AAGAGCACGACACCCATGG 60.003 57.895 4.14 4.14 0.00 3.66
67 68 0.036952 AGAAGAGCACGACACCCATG 60.037 55.000 0.00 0.00 0.00 3.66
68 69 0.687354 AAGAAGAGCACGACACCCAT 59.313 50.000 0.00 0.00 0.00 4.00
69 70 0.249868 CAAGAAGAGCACGACACCCA 60.250 55.000 0.00 0.00 0.00 4.51
70 71 0.033504 TCAAGAAGAGCACGACACCC 59.966 55.000 0.00 0.00 0.00 4.61
71 72 1.795286 CTTCAAGAAGAGCACGACACC 59.205 52.381 3.76 0.00 40.79 4.16
72 73 2.473235 GTCTTCAAGAAGAGCACGACAC 59.527 50.000 12.50 0.00 46.93 3.67
73 74 2.743938 GTCTTCAAGAAGAGCACGACA 58.256 47.619 12.50 0.00 46.93 4.35
74 75 1.716581 CGTCTTCAAGAAGAGCACGAC 59.283 52.381 12.50 0.96 46.93 4.34
75 76 1.337071 ACGTCTTCAAGAAGAGCACGA 59.663 47.619 21.57 0.00 46.93 4.35
76 77 1.716581 GACGTCTTCAAGAAGAGCACG 59.283 52.381 12.50 14.68 46.93 5.34
77 78 1.716581 CGACGTCTTCAAGAAGAGCAC 59.283 52.381 14.70 6.43 46.93 4.40
78 79 1.337071 ACGACGTCTTCAAGAAGAGCA 59.663 47.619 14.70 0.00 46.93 4.26
79 80 1.980156 GACGACGTCTTCAAGAAGAGC 59.020 52.381 20.52 7.35 46.93 4.09
80 81 2.235020 CGACGACGTCTTCAAGAAGAG 58.765 52.381 24.36 9.44 46.93 2.85
81 82 2.311450 CGACGACGTCTTCAAGAAGA 57.689 50.000 24.36 8.37 44.47 2.87
93 94 0.237761 AGAGAAGAACCACGACGACG 59.762 55.000 5.58 5.58 45.75 5.12
94 95 2.418983 AAGAGAAGAACCACGACGAC 57.581 50.000 0.00 0.00 0.00 4.34
95 96 2.100252 ACAAAGAGAAGAACCACGACGA 59.900 45.455 0.00 0.00 0.00 4.20
96 97 2.470821 ACAAAGAGAAGAACCACGACG 58.529 47.619 0.00 0.00 0.00 5.12
97 98 5.227908 TGATACAAAGAGAAGAACCACGAC 58.772 41.667 0.00 0.00 0.00 4.34
98 99 5.462530 TGATACAAAGAGAAGAACCACGA 57.537 39.130 0.00 0.00 0.00 4.35
99 100 4.627467 CCTGATACAAAGAGAAGAACCACG 59.373 45.833 0.00 0.00 0.00 4.94
100 101 4.938226 CCCTGATACAAAGAGAAGAACCAC 59.062 45.833 0.00 0.00 0.00 4.16
101 102 4.565652 GCCCTGATACAAAGAGAAGAACCA 60.566 45.833 0.00 0.00 0.00 3.67
102 103 3.942115 GCCCTGATACAAAGAGAAGAACC 59.058 47.826 0.00 0.00 0.00 3.62
103 104 3.942115 GGCCCTGATACAAAGAGAAGAAC 59.058 47.826 0.00 0.00 0.00 3.01
104 105 3.846588 AGGCCCTGATACAAAGAGAAGAA 59.153 43.478 0.00 0.00 0.00 2.52
105 106 3.452627 GAGGCCCTGATACAAAGAGAAGA 59.547 47.826 0.00 0.00 0.00 2.87
106 107 3.739519 CGAGGCCCTGATACAAAGAGAAG 60.740 52.174 0.00 0.00 0.00 2.85
107 108 2.168521 CGAGGCCCTGATACAAAGAGAA 59.831 50.000 0.00 0.00 0.00 2.87
108 109 1.757118 CGAGGCCCTGATACAAAGAGA 59.243 52.381 0.00 0.00 0.00 3.10
109 110 1.202580 CCGAGGCCCTGATACAAAGAG 60.203 57.143 0.00 0.00 0.00 2.85
110 111 0.830648 CCGAGGCCCTGATACAAAGA 59.169 55.000 0.00 0.00 0.00 2.52
111 112 0.179045 CCCGAGGCCCTGATACAAAG 60.179 60.000 0.00 0.00 0.00 2.77
112 113 0.912487 ACCCGAGGCCCTGATACAAA 60.912 55.000 0.00 0.00 0.00 2.83
113 114 1.306654 ACCCGAGGCCCTGATACAA 60.307 57.895 0.00 0.00 0.00 2.41
114 115 2.063979 CACCCGAGGCCCTGATACA 61.064 63.158 0.00 0.00 0.00 2.29
115 116 1.335132 TTCACCCGAGGCCCTGATAC 61.335 60.000 0.00 0.00 0.00 2.24
116 117 1.002403 TTCACCCGAGGCCCTGATA 59.998 57.895 0.00 0.00 0.00 2.15
117 118 2.285368 TTCACCCGAGGCCCTGAT 60.285 61.111 0.00 0.00 0.00 2.90
118 119 2.822643 ATCTTCACCCGAGGCCCTGA 62.823 60.000 0.00 0.00 0.00 3.86
119 120 2.317149 GATCTTCACCCGAGGCCCTG 62.317 65.000 0.00 0.00 0.00 4.45
120 121 2.041265 ATCTTCACCCGAGGCCCT 59.959 61.111 0.00 0.00 0.00 5.19
121 122 1.627297 AAGATCTTCACCCGAGGCCC 61.627 60.000 0.88 0.00 0.00 5.80
122 123 0.253327 AAAGATCTTCACCCGAGGCC 59.747 55.000 8.78 0.00 0.00 5.19
123 124 2.981859 TAAAGATCTTCACCCGAGGC 57.018 50.000 8.78 0.00 0.00 4.70
124 125 3.553096 CGGATAAAGATCTTCACCCGAGG 60.553 52.174 25.50 8.92 38.10 4.63
125 126 3.553096 CCGGATAAAGATCTTCACCCGAG 60.553 52.174 28.70 20.00 38.10 4.63
126 127 2.364324 CCGGATAAAGATCTTCACCCGA 59.636 50.000 28.70 7.79 38.10 5.14
127 128 2.102588 ACCGGATAAAGATCTTCACCCG 59.897 50.000 23.98 23.98 35.88 5.28
128 129 3.118371 ACACCGGATAAAGATCTTCACCC 60.118 47.826 9.46 8.88 32.15 4.61
129 130 3.871594 CACACCGGATAAAGATCTTCACC 59.128 47.826 9.46 11.20 32.15 4.02
130 131 3.871594 CCACACCGGATAAAGATCTTCAC 59.128 47.826 9.46 3.41 36.56 3.18
131 132 3.772572 TCCACACCGGATAAAGATCTTCA 59.227 43.478 9.46 0.00 39.64 3.02
132 133 4.402056 TCCACACCGGATAAAGATCTTC 57.598 45.455 9.46 0.00 39.64 2.87
143 144 1.534476 TTGCCTAGTCCACACCGGA 60.534 57.895 9.46 0.00 43.61 5.14
144 145 1.375523 GTTGCCTAGTCCACACCGG 60.376 63.158 0.00 0.00 0.00 5.28
145 146 1.736645 CGTTGCCTAGTCCACACCG 60.737 63.158 0.00 0.00 0.00 4.94
146 147 1.375523 CCGTTGCCTAGTCCACACC 60.376 63.158 0.00 0.00 0.00 4.16
147 148 2.033194 GCCGTTGCCTAGTCCACAC 61.033 63.158 0.00 0.00 0.00 3.82
148 149 2.345991 GCCGTTGCCTAGTCCACA 59.654 61.111 0.00 0.00 0.00 4.17
149 150 2.813908 CGCCGTTGCCTAGTCCAC 60.814 66.667 0.00 0.00 0.00 4.02
150 151 2.992689 TCGCCGTTGCCTAGTCCA 60.993 61.111 0.00 0.00 0.00 4.02
151 152 2.508663 GTCGCCGTTGCCTAGTCC 60.509 66.667 0.00 0.00 0.00 3.85
152 153 2.879462 CGTCGCCGTTGCCTAGTC 60.879 66.667 0.00 0.00 0.00 2.59
154 155 4.796231 AGCGTCGCCGTTGCCTAG 62.796 66.667 14.86 0.00 36.15 3.02
155 156 4.789075 GAGCGTCGCCGTTGCCTA 62.789 66.667 14.86 0.00 36.15 3.93
169 170 2.997485 AAGGAAAAATGACGCAGAGC 57.003 45.000 0.00 0.00 0.00 4.09
170 171 4.858935 TCAAAAGGAAAAATGACGCAGAG 58.141 39.130 0.00 0.00 0.00 3.35
171 172 4.261572 CCTCAAAAGGAAAAATGACGCAGA 60.262 41.667 0.00 0.00 46.67 4.26
172 173 3.983344 CCTCAAAAGGAAAAATGACGCAG 59.017 43.478 0.00 0.00 46.67 5.18
173 174 3.976169 CCTCAAAAGGAAAAATGACGCA 58.024 40.909 0.00 0.00 46.67 5.24
196 197 1.455786 CAGCTAAACTCCACGACAACG 59.544 52.381 0.00 0.00 45.75 4.10
197 198 2.221055 CACAGCTAAACTCCACGACAAC 59.779 50.000 0.00 0.00 0.00 3.32
198 199 2.479837 CACAGCTAAACTCCACGACAA 58.520 47.619 0.00 0.00 0.00 3.18
199 200 1.872237 GCACAGCTAAACTCCACGACA 60.872 52.381 0.00 0.00 0.00 4.35
200 201 0.790814 GCACAGCTAAACTCCACGAC 59.209 55.000 0.00 0.00 0.00 4.34
201 202 0.679505 AGCACAGCTAAACTCCACGA 59.320 50.000 0.00 0.00 36.99 4.35
202 203 2.094700 TCTAGCACAGCTAAACTCCACG 60.095 50.000 0.01 0.00 40.82 4.94
203 204 3.594603 TCTAGCACAGCTAAACTCCAC 57.405 47.619 0.01 0.00 40.82 4.02
204 205 3.181486 CGATCTAGCACAGCTAAACTCCA 60.181 47.826 0.01 0.00 40.82 3.86
205 206 3.181485 ACGATCTAGCACAGCTAAACTCC 60.181 47.826 0.01 0.00 40.82 3.85
206 207 4.035278 ACGATCTAGCACAGCTAAACTC 57.965 45.455 0.01 0.00 40.82 3.01
207 208 4.641094 ACTACGATCTAGCACAGCTAAACT 59.359 41.667 0.01 0.00 40.82 2.66
208 209 4.735822 CACTACGATCTAGCACAGCTAAAC 59.264 45.833 0.01 0.00 40.82 2.01
209 210 4.398358 ACACTACGATCTAGCACAGCTAAA 59.602 41.667 0.01 0.00 40.82 1.85
210 211 3.945921 ACACTACGATCTAGCACAGCTAA 59.054 43.478 0.01 0.00 40.82 3.09
211 212 3.312697 CACACTACGATCTAGCACAGCTA 59.687 47.826 0.00 0.00 40.44 3.32
212 213 2.098280 CACACTACGATCTAGCACAGCT 59.902 50.000 0.00 0.00 43.41 4.24
213 214 2.455032 CACACTACGATCTAGCACAGC 58.545 52.381 0.00 0.00 0.00 4.40
214 215 2.223595 CCCACACTACGATCTAGCACAG 60.224 54.545 0.00 0.00 0.00 3.66
215 216 1.749063 CCCACACTACGATCTAGCACA 59.251 52.381 0.00 0.00 0.00 4.57
216 217 1.067212 CCCCACACTACGATCTAGCAC 59.933 57.143 0.00 0.00 0.00 4.40
217 218 1.341679 ACCCCACACTACGATCTAGCA 60.342 52.381 0.00 0.00 0.00 3.49
218 219 1.067212 CACCCCACACTACGATCTAGC 59.933 57.143 0.00 0.00 0.00 3.42
219 220 2.099263 CACACCCCACACTACGATCTAG 59.901 54.545 0.00 0.00 0.00 2.43
220 221 2.097036 CACACCCCACACTACGATCTA 58.903 52.381 0.00 0.00 0.00 1.98
221 222 0.895530 CACACCCCACACTACGATCT 59.104 55.000 0.00 0.00 0.00 2.75
222 223 0.606604 ACACACCCCACACTACGATC 59.393 55.000 0.00 0.00 0.00 3.69
223 224 0.606604 GACACACCCCACACTACGAT 59.393 55.000 0.00 0.00 0.00 3.73
224 225 0.468585 AGACACACCCCACACTACGA 60.469 55.000 0.00 0.00 0.00 3.43
225 226 1.201647 CTAGACACACCCCACACTACG 59.798 57.143 0.00 0.00 0.00 3.51
226 227 2.245582 ACTAGACACACCCCACACTAC 58.754 52.381 0.00 0.00 0.00 2.73
227 228 2.688902 ACTAGACACACCCCACACTA 57.311 50.000 0.00 0.00 0.00 2.74
228 229 1.692519 GAACTAGACACACCCCACACT 59.307 52.381 0.00 0.00 0.00 3.55
229 230 1.692519 AGAACTAGACACACCCCACAC 59.307 52.381 0.00 0.00 0.00 3.82
230 231 1.968493 GAGAACTAGACACACCCCACA 59.032 52.381 0.00 0.00 0.00 4.17
231 232 1.275573 GGAGAACTAGACACACCCCAC 59.724 57.143 0.00 0.00 0.00 4.61
232 233 1.640917 GGAGAACTAGACACACCCCA 58.359 55.000 0.00 0.00 0.00 4.96
233 234 0.903236 GGGAGAACTAGACACACCCC 59.097 60.000 0.00 0.00 0.00 4.95
234 235 0.531200 CGGGAGAACTAGACACACCC 59.469 60.000 0.00 4.08 0.00 4.61
235 236 0.531200 CCGGGAGAACTAGACACACC 59.469 60.000 0.00 0.00 0.00 4.16
236 237 1.067776 CACCGGGAGAACTAGACACAC 60.068 57.143 6.32 0.00 0.00 3.82
237 238 1.254026 CACCGGGAGAACTAGACACA 58.746 55.000 6.32 0.00 0.00 3.72
238 239 0.108756 GCACCGGGAGAACTAGACAC 60.109 60.000 6.32 0.00 0.00 3.67
239 240 1.255667 GGCACCGGGAGAACTAGACA 61.256 60.000 6.32 0.00 0.00 3.41
240 241 1.516423 GGCACCGGGAGAACTAGAC 59.484 63.158 6.32 0.00 0.00 2.59
241 242 2.050350 CGGCACCGGGAGAACTAGA 61.050 63.158 6.32 0.00 35.56 2.43
242 243 1.885163 AACGGCACCGGGAGAACTAG 61.885 60.000 14.51 0.00 44.69 2.57
243 244 1.474332 AAACGGCACCGGGAGAACTA 61.474 55.000 14.51 0.00 44.69 2.24
244 245 2.814835 AAACGGCACCGGGAGAACT 61.815 57.895 14.51 0.00 44.69 3.01
245 246 2.281276 AAACGGCACCGGGAGAAC 60.281 61.111 14.51 0.00 44.69 3.01
246 247 2.281208 CAAACGGCACCGGGAGAA 60.281 61.111 14.51 0.00 44.69 2.87
247 248 3.109592 AACAAACGGCACCGGGAGA 62.110 57.895 14.51 0.00 44.69 3.71
248 249 2.593436 AACAAACGGCACCGGGAG 60.593 61.111 14.51 0.00 44.69 4.30
249 250 2.902846 CAACAAACGGCACCGGGA 60.903 61.111 14.51 0.00 44.69 5.14
250 251 3.972276 CCAACAAACGGCACCGGG 61.972 66.667 14.51 5.14 44.69 5.73
251 252 3.213402 ACCAACAAACGGCACCGG 61.213 61.111 14.51 0.00 44.69 5.28
252 253 2.025441 CACCAACAAACGGCACCG 59.975 61.111 7.71 7.71 46.03 4.94
253 254 2.415426 CCACCAACAAACGGCACC 59.585 61.111 0.00 0.00 0.00 5.01
254 255 1.226831 CACCACCAACAAACGGCAC 60.227 57.895 0.00 0.00 0.00 5.01
255 256 2.418910 CCACCACCAACAAACGGCA 61.419 57.895 0.00 0.00 0.00 5.69
256 257 2.344521 GACCACCACCAACAAACGGC 62.345 60.000 0.00 0.00 0.00 5.68
257 258 1.731093 GACCACCACCAACAAACGG 59.269 57.895 0.00 0.00 0.00 4.44
258 259 1.353804 CGACCACCACCAACAAACG 59.646 57.895 0.00 0.00 0.00 3.60
259 260 0.099791 CACGACCACCACCAACAAAC 59.900 55.000 0.00 0.00 0.00 2.93
260 261 0.322636 ACACGACCACCACCAACAAA 60.323 50.000 0.00 0.00 0.00 2.83
261 262 1.027255 CACACGACCACCACCAACAA 61.027 55.000 0.00 0.00 0.00 2.83
262 263 1.450491 CACACGACCACCACCAACA 60.450 57.895 0.00 0.00 0.00 3.33
263 264 2.830285 GCACACGACCACCACCAAC 61.830 63.158 0.00 0.00 0.00 3.77
264 265 2.515057 GCACACGACCACCACCAA 60.515 61.111 0.00 0.00 0.00 3.67
265 266 4.901123 CGCACACGACCACCACCA 62.901 66.667 0.00 0.00 43.93 4.17
266 267 4.903010 ACGCACACGACCACCACC 62.903 66.667 0.00 0.00 43.93 4.61
267 268 2.877974 GAACGCACACGACCACCAC 61.878 63.158 0.00 0.00 43.93 4.16
268 269 2.586635 GAACGCACACGACCACCA 60.587 61.111 0.00 0.00 43.93 4.17
269 270 2.279918 AGAACGCACACGACCACC 60.280 61.111 0.00 0.00 43.93 4.61
270 271 2.928361 CAGAACGCACACGACCAC 59.072 61.111 0.00 0.00 43.93 4.16
271 272 2.964925 GCAGAACGCACACGACCA 60.965 61.111 0.00 0.00 43.93 4.02
272 273 4.059459 CGCAGAACGCACACGACC 62.059 66.667 0.00 0.00 43.93 4.79
282 283 2.932614 AGATAATCAGCACACGCAGAAC 59.067 45.455 0.00 0.00 42.27 3.01
283 284 3.251479 AGATAATCAGCACACGCAGAA 57.749 42.857 0.00 0.00 42.27 3.02
284 285 2.967599 AGATAATCAGCACACGCAGA 57.032 45.000 0.00 0.00 42.27 4.26
285 286 3.492383 CCTAAGATAATCAGCACACGCAG 59.508 47.826 0.00 0.00 42.27 5.18
286 287 3.132111 TCCTAAGATAATCAGCACACGCA 59.868 43.478 0.00 0.00 42.27 5.24
287 288 3.717707 TCCTAAGATAATCAGCACACGC 58.282 45.455 0.00 0.00 38.99 5.34
288 289 4.618912 CGATCCTAAGATAATCAGCACACG 59.381 45.833 0.00 0.00 30.90 4.49
289 290 4.926238 CCGATCCTAAGATAATCAGCACAC 59.074 45.833 0.00 0.00 30.90 3.82
290 291 4.561530 GCCGATCCTAAGATAATCAGCACA 60.562 45.833 0.00 0.00 30.90 4.57
291 292 3.929610 GCCGATCCTAAGATAATCAGCAC 59.070 47.826 0.00 0.00 30.90 4.40
292 293 3.834813 AGCCGATCCTAAGATAATCAGCA 59.165 43.478 0.00 0.00 30.90 4.41
293 294 4.464069 AGCCGATCCTAAGATAATCAGC 57.536 45.455 0.00 0.00 30.90 4.26
294 295 6.226787 ACAAAGCCGATCCTAAGATAATCAG 58.773 40.000 0.00 0.00 30.90 2.90
295 296 6.174720 ACAAAGCCGATCCTAAGATAATCA 57.825 37.500 0.00 0.00 30.90 2.57
296 297 8.088981 TCTAACAAAGCCGATCCTAAGATAATC 58.911 37.037 0.00 0.00 30.90 1.75
297 298 7.963532 TCTAACAAAGCCGATCCTAAGATAAT 58.036 34.615 0.00 0.00 30.90 1.28
298 299 7.287005 TCTCTAACAAAGCCGATCCTAAGATAA 59.713 37.037 0.00 0.00 30.90 1.75
299 300 6.776116 TCTCTAACAAAGCCGATCCTAAGATA 59.224 38.462 0.00 0.00 30.90 1.98
300 301 5.598830 TCTCTAACAAAGCCGATCCTAAGAT 59.401 40.000 0.00 0.00 34.57 2.40
301 302 4.954202 TCTCTAACAAAGCCGATCCTAAGA 59.046 41.667 0.00 0.00 0.00 2.10
302 303 5.163499 ACTCTCTAACAAAGCCGATCCTAAG 60.163 44.000 0.00 0.00 0.00 2.18
303 304 4.710375 ACTCTCTAACAAAGCCGATCCTAA 59.290 41.667 0.00 0.00 0.00 2.69
304 305 4.279145 ACTCTCTAACAAAGCCGATCCTA 58.721 43.478 0.00 0.00 0.00 2.94
305 306 3.100671 ACTCTCTAACAAAGCCGATCCT 58.899 45.455 0.00 0.00 0.00 3.24
306 307 3.528597 ACTCTCTAACAAAGCCGATCC 57.471 47.619 0.00 0.00 0.00 3.36
307 308 4.499758 CGTAACTCTCTAACAAAGCCGATC 59.500 45.833 0.00 0.00 0.00 3.69
308 309 4.082354 ACGTAACTCTCTAACAAAGCCGAT 60.082 41.667 0.00 0.00 0.00 4.18
309 310 3.254166 ACGTAACTCTCTAACAAAGCCGA 59.746 43.478 0.00 0.00 0.00 5.54
310 311 3.572584 ACGTAACTCTCTAACAAAGCCG 58.427 45.455 0.00 0.00 0.00 5.52
311 312 4.385146 GTGACGTAACTCTCTAACAAAGCC 59.615 45.833 0.00 0.00 0.00 4.35
312 313 4.385146 GGTGACGTAACTCTCTAACAAAGC 59.615 45.833 2.34 0.00 0.00 3.51
313 314 5.526115 TGGTGACGTAACTCTCTAACAAAG 58.474 41.667 2.34 0.00 0.00 2.77
314 315 5.518848 TGGTGACGTAACTCTCTAACAAA 57.481 39.130 2.34 0.00 0.00 2.83
315 316 5.475909 AGATGGTGACGTAACTCTCTAACAA 59.524 40.000 2.34 0.00 0.00 2.83
316 317 5.008331 AGATGGTGACGTAACTCTCTAACA 58.992 41.667 2.34 0.00 0.00 2.41
317 318 5.564048 AGATGGTGACGTAACTCTCTAAC 57.436 43.478 2.34 0.00 0.00 2.34
318 319 5.475909 ACAAGATGGTGACGTAACTCTCTAA 59.524 40.000 2.34 0.00 0.00 2.10
319 320 5.008331 ACAAGATGGTGACGTAACTCTCTA 58.992 41.667 2.34 0.00 0.00 2.43
320 321 3.827302 ACAAGATGGTGACGTAACTCTCT 59.173 43.478 2.34 2.75 0.00 3.10
321 322 4.175787 ACAAGATGGTGACGTAACTCTC 57.824 45.455 2.34 0.34 0.00 3.20
322 323 5.448768 CGATACAAGATGGTGACGTAACTCT 60.449 44.000 2.34 0.00 0.00 3.24
323 324 4.733887 CGATACAAGATGGTGACGTAACTC 59.266 45.833 2.34 0.00 0.00 3.01
324 325 4.669318 CGATACAAGATGGTGACGTAACT 58.331 43.478 2.34 0.00 0.00 2.24
325 326 3.242248 GCGATACAAGATGGTGACGTAAC 59.758 47.826 0.00 0.00 0.00 2.50
326 327 3.129813 AGCGATACAAGATGGTGACGTAA 59.870 43.478 0.00 0.00 0.00 3.18
327 328 2.686405 AGCGATACAAGATGGTGACGTA 59.314 45.455 0.00 0.00 0.00 3.57
328 329 1.476891 AGCGATACAAGATGGTGACGT 59.523 47.619 0.00 0.00 0.00 4.34
329 330 2.120232 GAGCGATACAAGATGGTGACG 58.880 52.381 0.00 0.00 0.00 4.35
330 331 2.120232 CGAGCGATACAAGATGGTGAC 58.880 52.381 0.00 0.00 0.00 3.67
331 332 1.067060 CCGAGCGATACAAGATGGTGA 59.933 52.381 0.00 0.00 0.00 4.02
332 333 1.491670 CCGAGCGATACAAGATGGTG 58.508 55.000 0.00 0.00 0.00 4.17
333 334 0.249489 GCCGAGCGATACAAGATGGT 60.249 55.000 0.00 0.00 0.00 3.55
334 335 0.946221 GGCCGAGCGATACAAGATGG 60.946 60.000 0.00 0.00 0.00 3.51
335 336 1.278172 CGGCCGAGCGATACAAGATG 61.278 60.000 24.07 0.00 0.00 2.90
336 337 1.007271 CGGCCGAGCGATACAAGAT 60.007 57.895 24.07 0.00 0.00 2.40
337 338 2.411701 CGGCCGAGCGATACAAGA 59.588 61.111 24.07 0.00 0.00 3.02
338 339 2.104331 ACGGCCGAGCGATACAAG 59.896 61.111 35.90 0.00 0.00 3.16
339 340 1.655885 TACACGGCCGAGCGATACAA 61.656 55.000 35.90 3.03 0.00 2.41
340 341 2.114051 TACACGGCCGAGCGATACA 61.114 57.895 35.90 4.42 0.00 2.29
341 342 1.656569 GTACACGGCCGAGCGATAC 60.657 63.158 35.90 18.50 0.00 2.24
342 343 1.378882 AAGTACACGGCCGAGCGATA 61.379 55.000 35.90 9.98 0.00 2.92
343 344 2.707849 AAGTACACGGCCGAGCGAT 61.708 57.895 35.90 11.16 0.00 4.58
344 345 3.367743 AAGTACACGGCCGAGCGA 61.368 61.111 35.90 13.49 0.00 4.93
345 346 3.179265 CAAGTACACGGCCGAGCG 61.179 66.667 35.90 21.75 0.00 5.03
346 347 1.623973 GAACAAGTACACGGCCGAGC 61.624 60.000 35.90 17.85 0.00 5.03
347 348 1.342082 CGAACAAGTACACGGCCGAG 61.342 60.000 35.90 28.39 0.00 4.63
348 349 1.372004 CGAACAAGTACACGGCCGA 60.372 57.895 35.90 6.51 0.00 5.54
349 350 2.377310 CCGAACAAGTACACGGCCG 61.377 63.158 26.86 26.86 38.98 6.13
350 351 3.557824 CCGAACAAGTACACGGCC 58.442 61.111 0.00 0.00 38.98 6.13
353 354 1.259507 CACCAACCGAACAAGTACACG 59.740 52.381 0.00 0.00 0.00 4.49
354 355 1.003223 GCACCAACCGAACAAGTACAC 60.003 52.381 0.00 0.00 0.00 2.90
355 356 1.134340 AGCACCAACCGAACAAGTACA 60.134 47.619 0.00 0.00 0.00 2.90
356 357 1.589803 AGCACCAACCGAACAAGTAC 58.410 50.000 0.00 0.00 0.00 2.73
357 358 2.335316 AAGCACCAACCGAACAAGTA 57.665 45.000 0.00 0.00 0.00 2.24
358 359 1.470051 AAAGCACCAACCGAACAAGT 58.530 45.000 0.00 0.00 0.00 3.16
359 360 3.502211 AGATAAAGCACCAACCGAACAAG 59.498 43.478 0.00 0.00 0.00 3.16
360 361 3.482436 AGATAAAGCACCAACCGAACAA 58.518 40.909 0.00 0.00 0.00 2.83
361 362 3.134574 AGATAAAGCACCAACCGAACA 57.865 42.857 0.00 0.00 0.00 3.18
362 363 6.278363 TCTATAGATAAAGCACCAACCGAAC 58.722 40.000 0.00 0.00 0.00 3.95
363 364 6.474140 TCTATAGATAAAGCACCAACCGAA 57.526 37.500 0.00 0.00 0.00 4.30
364 365 5.509163 GCTCTATAGATAAAGCACCAACCGA 60.509 44.000 2.11 0.00 34.86 4.69
365 366 4.686554 GCTCTATAGATAAAGCACCAACCG 59.313 45.833 2.11 0.00 34.86 4.44
366 367 4.686554 CGCTCTATAGATAAAGCACCAACC 59.313 45.833 2.11 0.00 34.39 3.77
367 368 4.686554 CCGCTCTATAGATAAAGCACCAAC 59.313 45.833 2.11 0.00 34.39 3.77
368 369 4.262463 CCCGCTCTATAGATAAAGCACCAA 60.262 45.833 2.11 0.00 34.39 3.67
369 370 3.258372 CCCGCTCTATAGATAAAGCACCA 59.742 47.826 2.11 0.00 34.39 4.17
370 371 3.368531 CCCCGCTCTATAGATAAAGCACC 60.369 52.174 2.11 0.00 34.39 5.01
371 372 3.851098 CCCCGCTCTATAGATAAAGCAC 58.149 50.000 2.11 0.00 34.39 4.40
372 373 2.233922 GCCCCGCTCTATAGATAAAGCA 59.766 50.000 2.11 0.00 34.39 3.91
373 374 2.735762 CGCCCCGCTCTATAGATAAAGC 60.736 54.545 2.11 2.27 0.00 3.51
374 375 2.753452 TCGCCCCGCTCTATAGATAAAG 59.247 50.000 2.11 0.00 0.00 1.85
375 376 2.799017 TCGCCCCGCTCTATAGATAAA 58.201 47.619 2.11 0.00 0.00 1.40
376 377 2.502142 TCGCCCCGCTCTATAGATAA 57.498 50.000 2.11 0.00 0.00 1.75
377 378 2.502142 TTCGCCCCGCTCTATAGATA 57.498 50.000 2.11 0.00 0.00 1.98
378 379 1.546476 CTTTCGCCCCGCTCTATAGAT 59.454 52.381 2.11 0.00 0.00 1.98
379 380 0.959553 CTTTCGCCCCGCTCTATAGA 59.040 55.000 1.69 1.69 0.00 1.98
380 381 0.667792 GCTTTCGCCCCGCTCTATAG 60.668 60.000 0.00 0.00 0.00 1.31
381 382 1.366366 GCTTTCGCCCCGCTCTATA 59.634 57.895 0.00 0.00 0.00 1.31
382 383 2.109181 GCTTTCGCCCCGCTCTAT 59.891 61.111 0.00 0.00 0.00 1.98
394 395 4.265320 CACAACTTTTCGAAACAGGCTTTC 59.735 41.667 10.79 0.00 0.00 2.62
395 396 4.173256 CACAACTTTTCGAAACAGGCTTT 58.827 39.130 10.79 0.46 0.00 3.51
396 397 3.428862 CCACAACTTTTCGAAACAGGCTT 60.429 43.478 10.79 1.09 0.00 4.35
397 398 2.099098 CCACAACTTTTCGAAACAGGCT 59.901 45.455 10.79 1.54 0.00 4.58
398 399 2.459934 CCACAACTTTTCGAAACAGGC 58.540 47.619 10.79 0.00 0.00 4.85
399 400 2.159310 TGCCACAACTTTTCGAAACAGG 60.159 45.455 10.79 6.62 0.00 4.00
400 401 3.143807 TGCCACAACTTTTCGAAACAG 57.856 42.857 10.79 13.19 0.00 3.16
401 402 3.577649 TTGCCACAACTTTTCGAAACA 57.422 38.095 10.79 0.00 0.00 2.83
402 403 4.912528 TTTTGCCACAACTTTTCGAAAC 57.087 36.364 10.79 0.00 0.00 2.78
403 404 7.778470 ATTATTTTGCCACAACTTTTCGAAA 57.222 28.000 6.47 6.47 0.00 3.46
404 405 7.778470 AATTATTTTGCCACAACTTTTCGAA 57.222 28.000 0.00 0.00 0.00 3.71
405 406 8.138712 ACTAATTATTTTGCCACAACTTTTCGA 58.861 29.630 0.00 0.00 0.00 3.71
406 407 8.293114 ACTAATTATTTTGCCACAACTTTTCG 57.707 30.769 0.00 0.00 0.00 3.46
428 429 6.808321 AAGTATTTGGGAGTGCTGATACTA 57.192 37.500 0.00 0.00 31.94 1.82
489 490 1.255882 AATGGCATTTGCGGAAGTCA 58.744 45.000 6.96 0.00 43.26 3.41
497 498 5.804692 TTTCATCATGAAATGGCATTTGC 57.195 34.783 28.78 19.27 46.73 3.68
514 515 8.114331 TGTTTTGAGTGCTCATAGAATTTCAT 57.886 30.769 2.47 0.00 39.64 2.57
658 659 5.355071 GTCATGAACATGCCAAGATGTAAGA 59.645 40.000 9.59 0.00 35.43 2.10
666 667 0.522626 TGCGTCATGAACATGCCAAG 59.477 50.000 9.59 3.15 38.65 3.61
667 668 0.240678 GTGCGTCATGAACATGCCAA 59.759 50.000 9.59 0.00 38.65 4.52
670 671 3.163594 GTTTAGTGCGTCATGAACATGC 58.836 45.455 9.59 0.00 38.65 4.06
671 672 3.122780 TCGTTTAGTGCGTCATGAACATG 59.877 43.478 0.00 8.31 40.09 3.21
673 674 2.745102 TCGTTTAGTGCGTCATGAACA 58.255 42.857 0.00 0.00 0.00 3.18
674 675 3.781341 TTCGTTTAGTGCGTCATGAAC 57.219 42.857 0.00 0.00 0.00 3.18
677 678 4.553429 GGAATTTTCGTTTAGTGCGTCATG 59.447 41.667 0.00 0.00 0.00 3.07
678 679 4.454504 AGGAATTTTCGTTTAGTGCGTCAT 59.545 37.500 0.00 0.00 0.00 3.06
680 681 4.392216 GAGGAATTTTCGTTTAGTGCGTC 58.608 43.478 0.00 0.00 0.00 5.19
681 682 3.120786 CGAGGAATTTTCGTTTAGTGCGT 60.121 43.478 5.44 0.00 33.57 5.24
682 683 3.122278 TCGAGGAATTTTCGTTTAGTGCG 59.878 43.478 11.48 0.00 39.05 5.34
730 1091 4.456566 TGGTGATATCCATGCGAATGATTG 59.543 41.667 4.44 0.00 31.96 2.67
731 1092 4.654915 TGGTGATATCCATGCGAATGATT 58.345 39.130 4.44 0.00 31.96 2.57
735 1096 3.072915 TCCTTGGTGATATCCATGCGAAT 59.927 43.478 0.00 0.00 37.33 3.34
840 1203 8.558973 TGAACATGCCCCAAATTTTAAAATAG 57.441 30.769 13.68 9.50 0.00 1.73
847 1210 2.978278 TCCTGAACATGCCCCAAATTTT 59.022 40.909 0.00 0.00 0.00 1.82
854 1217 0.842635 ATCTCTCCTGAACATGCCCC 59.157 55.000 0.00 0.00 0.00 5.80
864 1227 3.320610 TTAGGACCCTCATCTCTCCTG 57.679 52.381 0.00 0.00 34.78 3.86
867 1230 5.878406 TTCATTTAGGACCCTCATCTCTC 57.122 43.478 0.00 0.00 0.00 3.20
869 1232 7.445707 GGTAATTTCATTTAGGACCCTCATCTC 59.554 40.741 0.00 0.00 0.00 2.75
916 1439 2.480073 CCATTGTCCATTTGATCGTGCC 60.480 50.000 0.00 0.00 0.00 5.01
918 1441 2.480073 GGCCATTGTCCATTTGATCGTG 60.480 50.000 0.00 0.00 0.00 4.35
927 1450 0.630673 TAGCCTTGGCCATTGTCCAT 59.369 50.000 6.09 0.00 32.92 3.41
931 1454 2.008242 TTTGTAGCCTTGGCCATTGT 57.992 45.000 6.09 0.00 0.00 2.71
956 1479 4.626172 GGTCAGTTTATCGAAGTTGGACTC 59.374 45.833 0.00 0.00 0.00 3.36
970 1493 3.478857 ACGGATGTGTTGGTCAGTTTA 57.521 42.857 0.00 0.00 0.00 2.01
990 1513 1.017177 GTCCAGCCATCGTTGCGTAA 61.017 55.000 0.00 0.00 0.00 3.18
1033 1556 2.988839 GCAGGGGGAACAGCAGGAT 61.989 63.158 0.00 0.00 0.00 3.24
1117 1640 0.321653 GTGGTGTGGAGGATGGTGAC 60.322 60.000 0.00 0.00 0.00 3.67
1194 1717 1.024046 CCACATCGTCCGGCATTTCA 61.024 55.000 0.00 0.00 0.00 2.69
1260 1787 2.363975 GCACCCCGACACCTCCATA 61.364 63.158 0.00 0.00 0.00 2.74
1373 1900 4.815108 TCGGCAGGCCTAGCTCGA 62.815 66.667 23.16 23.16 34.17 4.04
1499 2032 2.159114 ACCCACACAAAATTGCAGTGAC 60.159 45.455 16.31 0.00 38.81 3.67
1503 2036 3.587923 CCATACCCACACAAAATTGCAG 58.412 45.455 0.00 0.00 0.00 4.41
1505 2038 2.301583 ACCCATACCCACACAAAATTGC 59.698 45.455 0.00 0.00 0.00 3.56
1570 2103 9.230122 TCATGCTCTGAAATGAAATACTACAAA 57.770 29.630 1.35 0.00 29.97 2.83
1571 2104 8.791327 TCATGCTCTGAAATGAAATACTACAA 57.209 30.769 1.35 0.00 29.97 2.41
1572 2105 8.668353 GTTCATGCTCTGAAATGAAATACTACA 58.332 33.333 13.85 0.00 45.27 2.74
1573 2106 8.887717 AGTTCATGCTCTGAAATGAAATACTAC 58.112 33.333 13.85 5.24 45.27 2.73
1624 2157 0.676151 GGTCCGAGACTCGTACTGGT 60.676 60.000 22.61 0.00 38.40 4.00
1627 2160 0.324285 ACAGGTCCGAGACTCGTACT 59.676 55.000 22.61 14.28 38.40 2.73
1723 2257 1.488812 TGTGTTGATTAGGATCCCCGG 59.511 52.381 8.55 0.00 37.58 5.73
1732 2266 6.030379 GAGAGCTTCGAATGTGTTGATTAG 57.970 41.667 0.00 0.00 0.00 1.73
1830 2364 0.247460 CGATGGTGGAGAGCTTGTGA 59.753 55.000 0.00 0.00 0.00 3.58
1963 2506 0.232303 GCAACCTCGTTGAAGTCGTG 59.768 55.000 8.65 0.00 45.28 4.35
2031 2574 4.493747 GAACCGAGGACGAGGCCG 62.494 72.222 0.00 0.00 42.66 6.13
2046 2589 1.519246 CAGCTCTGCATCCTCGGAA 59.481 57.895 0.00 0.00 0.00 4.30
2211 2760 2.672996 GGGCTGCACAACATCGGT 60.673 61.111 0.50 0.00 0.00 4.69
2316 2865 0.379669 CAATGGCGTGCTCAATCTCC 59.620 55.000 0.00 0.00 0.00 3.71
2368 2917 2.343426 CCTTTGCCCTTTCCCTCGC 61.343 63.158 0.00 0.00 0.00 5.03
2382 2931 4.010349 CCGATTTGGTCTTAAGCTCCTTT 58.990 43.478 14.46 3.57 0.00 3.11
2470 3019 5.657302 ACCACCTCGAATAGTTTCATAGAGT 59.343 40.000 0.00 0.00 0.00 3.24
2510 3059 3.804036 TGGTCTTTGCCAGAATATACCG 58.196 45.455 0.00 0.00 33.97 4.02
2519 3068 9.541679 GTTTCTTAAACCTCTGGTCTTTGCCAG 62.542 44.444 5.81 5.81 44.41 4.85
2530 3079 8.622948 ATTACCTCTTGTTTCTTAAACCTCTG 57.377 34.615 0.41 0.00 40.67 3.35
2531 3080 9.945904 CTATTACCTCTTGTTTCTTAAACCTCT 57.054 33.333 0.41 0.00 40.67 3.69
2548 3097 3.556004 GGGATCTGCAGTGCTATTACCTC 60.556 52.174 17.60 3.62 0.00 3.85
2549 3098 2.370189 GGGATCTGCAGTGCTATTACCT 59.630 50.000 17.60 0.00 0.00 3.08
2550 3099 2.370189 AGGGATCTGCAGTGCTATTACC 59.630 50.000 17.60 12.93 0.00 2.85
2551 3100 3.760580 AGGGATCTGCAGTGCTATTAC 57.239 47.619 17.60 3.98 0.00 1.89
2552 3101 5.366768 AGTTTAGGGATCTGCAGTGCTATTA 59.633 40.000 17.60 0.00 0.00 0.98
2553 3102 4.164988 AGTTTAGGGATCTGCAGTGCTATT 59.835 41.667 17.60 0.00 0.00 1.73
2554 3103 3.713764 AGTTTAGGGATCTGCAGTGCTAT 59.286 43.478 17.60 9.93 0.00 2.97
2555 3104 3.107601 AGTTTAGGGATCTGCAGTGCTA 58.892 45.455 17.60 4.84 0.00 3.49
2556 3105 1.912043 AGTTTAGGGATCTGCAGTGCT 59.088 47.619 17.60 0.00 0.00 4.40
2557 3106 2.409948 AGTTTAGGGATCTGCAGTGC 57.590 50.000 14.67 8.58 0.00 4.40
2558 3107 3.679389 ACAAGTTTAGGGATCTGCAGTG 58.321 45.455 14.67 2.18 0.00 3.66
2559 3108 3.327757 TGACAAGTTTAGGGATCTGCAGT 59.672 43.478 14.67 0.42 0.00 4.40
2560 3109 3.942829 TGACAAGTTTAGGGATCTGCAG 58.057 45.455 7.63 7.63 0.00 4.41
2561 3110 4.264253 CATGACAAGTTTAGGGATCTGCA 58.736 43.478 0.00 0.00 0.00 4.41
2562 3111 3.629398 CCATGACAAGTTTAGGGATCTGC 59.371 47.826 0.00 0.00 0.00 4.26
2563 3112 5.102953 TCCATGACAAGTTTAGGGATCTG 57.897 43.478 0.00 0.00 0.00 2.90
2564 3113 4.164988 CCTCCATGACAAGTTTAGGGATCT 59.835 45.833 0.00 0.00 0.00 2.75
2565 3114 4.080299 ACCTCCATGACAAGTTTAGGGATC 60.080 45.833 0.00 0.00 0.00 3.36
2566 3115 3.852578 ACCTCCATGACAAGTTTAGGGAT 59.147 43.478 0.00 0.00 0.00 3.85
2567 3116 3.009033 CACCTCCATGACAAGTTTAGGGA 59.991 47.826 0.00 0.00 0.00 4.20
2568 3117 3.009033 TCACCTCCATGACAAGTTTAGGG 59.991 47.826 0.00 0.00 0.00 3.53
2569 3118 4.286297 TCACCTCCATGACAAGTTTAGG 57.714 45.455 0.00 0.00 0.00 2.69
2570 3119 4.637534 CCATCACCTCCATGACAAGTTTAG 59.362 45.833 0.00 0.00 0.00 1.85
2571 3120 4.042809 ACCATCACCTCCATGACAAGTTTA 59.957 41.667 0.00 0.00 0.00 2.01
2572 3121 3.181429 ACCATCACCTCCATGACAAGTTT 60.181 43.478 0.00 0.00 0.00 2.66
2573 3122 2.376518 ACCATCACCTCCATGACAAGTT 59.623 45.455 0.00 0.00 0.00 2.66
2574 3123 1.988107 ACCATCACCTCCATGACAAGT 59.012 47.619 0.00 0.00 0.00 3.16
2575 3124 2.795231 ACCATCACCTCCATGACAAG 57.205 50.000 0.00 0.00 0.00 3.16
2576 3125 3.524095 AAACCATCACCTCCATGACAA 57.476 42.857 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.