Multiple sequence alignment - TraesCS2B01G174500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G174500 chr2B 100.000 3640 0 0 556 4195 148866529 148862890 0.000000e+00 6722
1 TraesCS2B01G174500 chr2B 100.000 234 0 0 1 234 148867084 148866851 2.320000e-117 433
2 TraesCS2B01G174500 chr2D 93.942 2443 122 9 836 3271 97637796 97640219 0.000000e+00 3668
3 TraesCS2B01G174500 chr2D 86.752 234 28 2 2 234 69348259 69348490 1.500000e-64 257
4 TraesCS2B01G174500 chr3D 93.235 1419 78 8 1718 3127 604775629 604777038 0.000000e+00 2073
5 TraesCS2B01G174500 chr4B 96.064 813 31 1 3384 4195 614117073 614117885 0.000000e+00 1323
6 TraesCS2B01G174500 chr4B 94.832 832 40 3 3365 4195 47497378 47496549 0.000000e+00 1295
7 TraesCS2B01G174500 chr2A 94.138 853 41 5 778 1621 96137991 96137139 0.000000e+00 1290
8 TraesCS2B01G174500 chr5B 95.314 811 36 2 3387 4195 655086797 655087607 0.000000e+00 1286
9 TraesCS2B01G174500 chr3B 95.309 810 36 2 3387 4195 592298987 592298179 0.000000e+00 1284
10 TraesCS2B01G174500 chr3B 94.146 820 45 2 3377 4195 728515151 728514334 0.000000e+00 1245
11 TraesCS2B01G174500 chr7B 95.074 812 37 2 3387 4195 116478229 116477418 0.000000e+00 1275
12 TraesCS2B01G174500 chr7B 94.853 816 41 1 3380 4195 496876121 496876935 0.000000e+00 1273
13 TraesCS2B01G174500 chr6B 94.821 811 42 0 3385 4195 507914102 507913292 0.000000e+00 1266
14 TraesCS2B01G174500 chr6B 94.815 810 42 0 3383 4192 190373447 190374256 0.000000e+00 1264
15 TraesCS2B01G174500 chr1B 86.074 517 72 0 2322 2838 561546537 561546021 1.320000e-154 556
16 TraesCS2B01G174500 chr5D 85.792 183 26 0 2427 2609 534762068 534762250 1.190000e-45 195


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G174500 chr2B 148862890 148867084 4194 True 3577.5 6722 100.000 1 4195 2 chr2B.!!$R1 4194
1 TraesCS2B01G174500 chr2D 97637796 97640219 2423 False 3668.0 3668 93.942 836 3271 1 chr2D.!!$F2 2435
2 TraesCS2B01G174500 chr3D 604775629 604777038 1409 False 2073.0 2073 93.235 1718 3127 1 chr3D.!!$F1 1409
3 TraesCS2B01G174500 chr4B 614117073 614117885 812 False 1323.0 1323 96.064 3384 4195 1 chr4B.!!$F1 811
4 TraesCS2B01G174500 chr4B 47496549 47497378 829 True 1295.0 1295 94.832 3365 4195 1 chr4B.!!$R1 830
5 TraesCS2B01G174500 chr2A 96137139 96137991 852 True 1290.0 1290 94.138 778 1621 1 chr2A.!!$R1 843
6 TraesCS2B01G174500 chr5B 655086797 655087607 810 False 1286.0 1286 95.314 3387 4195 1 chr5B.!!$F1 808
7 TraesCS2B01G174500 chr3B 592298179 592298987 808 True 1284.0 1284 95.309 3387 4195 1 chr3B.!!$R1 808
8 TraesCS2B01G174500 chr3B 728514334 728515151 817 True 1245.0 1245 94.146 3377 4195 1 chr3B.!!$R2 818
9 TraesCS2B01G174500 chr7B 116477418 116478229 811 True 1275.0 1275 95.074 3387 4195 1 chr7B.!!$R1 808
10 TraesCS2B01G174500 chr7B 496876121 496876935 814 False 1273.0 1273 94.853 3380 4195 1 chr7B.!!$F1 815
11 TraesCS2B01G174500 chr6B 507913292 507914102 810 True 1266.0 1266 94.821 3385 4195 1 chr6B.!!$R1 810
12 TraesCS2B01G174500 chr6B 190373447 190374256 809 False 1264.0 1264 94.815 3383 4192 1 chr6B.!!$F1 809
13 TraesCS2B01G174500 chr1B 561546021 561546537 516 True 556.0 556 86.074 2322 2838 1 chr1B.!!$R1 516

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
23 24 0.034198 TTGGAGTTTCATCGCACCGA 59.966 50.0 0.0 0.0 41.13 4.69 F
1004 1029 0.033504 ACACACCTCGATCACACACC 59.966 55.0 0.0 0.0 0.00 4.16 F
1253 1278 1.021202 CAACTTCAACGCCCAGTTCA 58.979 50.0 0.0 0.0 42.02 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1978 2008 1.002773 GGCGAGAAGAAGGGGTTGTAA 59.997 52.381 0.0 0.0 0.00 2.41 R
2542 2572 1.734137 CTCGGTGACCCTCCGTATG 59.266 63.158 0.0 0.0 46.86 2.39 R
3232 3270 0.032952 TACACGTCCAGCCTTGTCAC 59.967 55.000 0.0 0.0 0.00 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.657537 CGTGTTGGAGTTTCATCGC 57.342 52.632 0.00 0.00 0.00 4.58
19 20 0.865111 CGTGTTGGAGTTTCATCGCA 59.135 50.000 0.00 0.00 0.00 5.10
20 21 1.398451 CGTGTTGGAGTTTCATCGCAC 60.398 52.381 0.00 0.00 0.00 5.34
21 22 1.069227 GTGTTGGAGTTTCATCGCACC 60.069 52.381 0.00 0.00 0.00 5.01
22 23 0.165944 GTTGGAGTTTCATCGCACCG 59.834 55.000 0.00 0.00 0.00 4.94
23 24 0.034198 TTGGAGTTTCATCGCACCGA 59.966 50.000 0.00 0.00 41.13 4.69
24 25 0.669318 TGGAGTTTCATCGCACCGAC 60.669 55.000 0.00 0.00 39.18 4.79
25 26 1.683790 GGAGTTTCATCGCACCGACG 61.684 60.000 0.00 0.00 39.18 5.12
26 27 1.683790 GAGTTTCATCGCACCGACGG 61.684 60.000 13.61 13.61 39.18 4.79
27 28 2.433491 TTTCATCGCACCGACGGG 60.433 61.111 20.00 8.43 39.18 5.28
28 29 3.943479 TTTCATCGCACCGACGGGG 62.943 63.158 20.00 16.82 39.18 5.73
37 38 4.776322 CCGACGGGGCTGCAATGA 62.776 66.667 5.81 0.00 0.00 2.57
38 39 2.745884 CGACGGGGCTGCAATGAA 60.746 61.111 0.50 0.00 0.00 2.57
39 40 2.753966 CGACGGGGCTGCAATGAAG 61.754 63.158 0.50 0.00 0.00 3.02
40 41 1.675641 GACGGGGCTGCAATGAAGT 60.676 57.895 0.50 0.00 0.00 3.01
41 42 1.926511 GACGGGGCTGCAATGAAGTG 61.927 60.000 0.50 0.00 0.00 3.16
42 43 1.973281 CGGGGCTGCAATGAAGTGT 60.973 57.895 0.50 0.00 0.00 3.55
43 44 1.885871 GGGGCTGCAATGAAGTGTC 59.114 57.895 0.50 0.00 0.00 3.67
44 45 1.598701 GGGGCTGCAATGAAGTGTCC 61.599 60.000 0.50 0.00 0.00 4.02
45 46 1.598701 GGGCTGCAATGAAGTGTCCC 61.599 60.000 0.50 0.00 0.00 4.46
46 47 0.610232 GGCTGCAATGAAGTGTCCCT 60.610 55.000 0.50 0.00 0.00 4.20
47 48 0.807496 GCTGCAATGAAGTGTCCCTC 59.193 55.000 0.00 0.00 0.00 4.30
48 49 1.081892 CTGCAATGAAGTGTCCCTCG 58.918 55.000 0.00 0.00 0.00 4.63
49 50 0.684535 TGCAATGAAGTGTCCCTCGA 59.315 50.000 0.00 0.00 0.00 4.04
50 51 1.071542 TGCAATGAAGTGTCCCTCGAA 59.928 47.619 0.00 0.00 0.00 3.71
51 52 1.734465 GCAATGAAGTGTCCCTCGAAG 59.266 52.381 0.00 0.00 0.00 3.79
52 53 1.734465 CAATGAAGTGTCCCTCGAAGC 59.266 52.381 0.00 0.00 0.00 3.86
53 54 1.270907 ATGAAGTGTCCCTCGAAGCT 58.729 50.000 0.00 0.00 0.00 3.74
54 55 0.318441 TGAAGTGTCCCTCGAAGCTG 59.682 55.000 0.00 0.00 0.00 4.24
55 56 1.004440 AAGTGTCCCTCGAAGCTGC 60.004 57.895 0.00 0.00 0.00 5.25
56 57 1.758440 AAGTGTCCCTCGAAGCTGCA 61.758 55.000 1.02 0.00 0.00 4.41
57 58 1.301716 GTGTCCCTCGAAGCTGCAA 60.302 57.895 1.02 0.00 0.00 4.08
58 59 0.884704 GTGTCCCTCGAAGCTGCAAA 60.885 55.000 1.02 0.00 0.00 3.68
59 60 0.179032 TGTCCCTCGAAGCTGCAAAA 60.179 50.000 1.02 0.00 0.00 2.44
60 61 1.168714 GTCCCTCGAAGCTGCAAAAT 58.831 50.000 1.02 0.00 0.00 1.82
61 62 1.135575 GTCCCTCGAAGCTGCAAAATG 60.136 52.381 1.02 0.00 0.00 2.32
62 63 0.171903 CCCTCGAAGCTGCAAAATGG 59.828 55.000 1.02 0.00 0.00 3.16
63 64 1.167851 CCTCGAAGCTGCAAAATGGA 58.832 50.000 1.02 0.00 0.00 3.41
64 65 1.131883 CCTCGAAGCTGCAAAATGGAG 59.868 52.381 1.02 1.52 38.97 3.86
82 83 2.434884 CGCCAGTGGTGCTTCGAT 60.435 61.111 10.38 0.00 0.00 3.59
83 84 2.743752 CGCCAGTGGTGCTTCGATG 61.744 63.158 10.38 0.00 0.00 3.84
84 85 2.401766 GCCAGTGGTGCTTCGATGG 61.402 63.158 11.74 0.00 0.00 3.51
85 86 1.296392 CCAGTGGTGCTTCGATGGA 59.704 57.895 0.00 0.00 0.00 3.41
86 87 0.742281 CCAGTGGTGCTTCGATGGAG 60.742 60.000 0.00 0.00 0.00 3.86
87 88 1.078848 AGTGGTGCTTCGATGGAGC 60.079 57.895 13.86 13.86 0.00 4.70
88 89 1.078848 GTGGTGCTTCGATGGAGCT 60.079 57.895 19.72 0.00 0.00 4.09
89 90 0.674895 GTGGTGCTTCGATGGAGCTT 60.675 55.000 19.72 0.00 0.00 3.74
90 91 0.391661 TGGTGCTTCGATGGAGCTTC 60.392 55.000 19.72 8.54 0.00 3.86
91 92 1.424493 GGTGCTTCGATGGAGCTTCG 61.424 60.000 13.54 0.00 37.94 3.79
92 93 1.811266 TGCTTCGATGGAGCTTCGC 60.811 57.895 8.90 0.00 36.56 4.70
93 94 2.529619 GCTTCGATGGAGCTTCGCC 61.530 63.158 1.34 0.00 36.56 5.54
94 95 2.202743 TTCGATGGAGCTTCGCCG 60.203 61.111 1.34 0.59 36.56 6.46
95 96 2.613739 CTTCGATGGAGCTTCGCCGA 62.614 60.000 4.64 4.64 36.56 5.54
96 97 2.884087 TTCGATGGAGCTTCGCCGAC 62.884 60.000 7.90 0.00 36.56 4.79
97 98 2.956964 GATGGAGCTTCGCCGACG 60.957 66.667 0.00 0.00 42.01 5.12
101 102 3.621394 GAGCTTCGCCGACGCATC 61.621 66.667 18.04 8.52 39.84 3.91
119 120 3.451504 CGACGGATCGTTAGGCTAC 57.548 57.895 0.00 0.00 43.66 3.58
120 121 0.659427 CGACGGATCGTTAGGCTACA 59.341 55.000 0.00 0.00 43.66 2.74
121 122 1.064505 CGACGGATCGTTAGGCTACAA 59.935 52.381 0.00 0.00 43.66 2.41
122 123 2.287427 CGACGGATCGTTAGGCTACAAT 60.287 50.000 0.00 0.00 43.66 2.71
123 124 3.050619 GACGGATCGTTAGGCTACAATG 58.949 50.000 0.00 0.00 41.37 2.82
124 125 2.223971 ACGGATCGTTAGGCTACAATGG 60.224 50.000 0.00 0.00 36.35 3.16
125 126 2.035449 CGGATCGTTAGGCTACAATGGA 59.965 50.000 0.00 0.00 0.00 3.41
126 127 3.306088 CGGATCGTTAGGCTACAATGGAT 60.306 47.826 0.00 0.00 0.00 3.41
127 128 4.246458 GGATCGTTAGGCTACAATGGATC 58.754 47.826 0.00 2.77 0.00 3.36
128 129 4.021016 GGATCGTTAGGCTACAATGGATCT 60.021 45.833 0.00 0.00 0.00 2.75
129 130 4.585955 TCGTTAGGCTACAATGGATCTC 57.414 45.455 0.00 0.00 0.00 2.75
130 131 3.321111 TCGTTAGGCTACAATGGATCTCC 59.679 47.826 0.00 0.00 0.00 3.71
131 132 3.654414 GTTAGGCTACAATGGATCTCCG 58.346 50.000 0.00 0.00 39.43 4.63
132 133 0.394565 AGGCTACAATGGATCTCCGC 59.605 55.000 0.00 0.00 39.43 5.54
133 134 0.603975 GGCTACAATGGATCTCCGCC 60.604 60.000 0.00 0.00 39.43 6.13
134 135 0.946221 GCTACAATGGATCTCCGCCG 60.946 60.000 0.00 0.00 39.43 6.46
135 136 0.319900 CTACAATGGATCTCCGCCGG 60.320 60.000 0.00 0.00 39.43 6.13
136 137 1.046472 TACAATGGATCTCCGCCGGT 61.046 55.000 1.63 0.00 39.43 5.28
137 138 1.889105 CAATGGATCTCCGCCGGTG 60.889 63.158 8.42 8.42 39.43 4.94
138 139 2.063979 AATGGATCTCCGCCGGTGA 61.064 57.895 18.79 10.66 39.43 4.02
139 140 1.410850 AATGGATCTCCGCCGGTGAT 61.411 55.000 19.71 19.71 38.44 3.06
140 141 2.029666 GGATCTCCGCCGGTGATG 59.970 66.667 23.98 8.78 36.26 3.07
141 142 2.663188 GATCTCCGCCGGTGATGC 60.663 66.667 23.98 12.28 36.26 3.91
142 143 3.445518 GATCTCCGCCGGTGATGCA 62.446 63.158 23.98 0.00 36.26 3.96
143 144 2.721971 GATCTCCGCCGGTGATGCAT 62.722 60.000 23.98 0.00 36.26 3.96
144 145 2.329539 ATCTCCGCCGGTGATGCATT 62.330 55.000 19.03 0.00 35.04 3.56
145 146 2.823593 TCCGCCGGTGATGCATTG 60.824 61.111 18.79 0.00 0.00 2.82
146 147 3.891400 CCGCCGGTGATGCATTGG 61.891 66.667 18.79 2.11 0.00 3.16
147 148 2.823593 CGCCGGTGATGCATTGGA 60.824 61.111 10.20 0.00 0.00 3.53
148 149 2.827051 CGCCGGTGATGCATTGGAG 61.827 63.158 10.20 0.00 0.00 3.86
149 150 3.113745 CCGGTGATGCATTGGAGC 58.886 61.111 0.00 0.00 0.00 4.70
150 151 2.711311 CGGTGATGCATTGGAGCG 59.289 61.111 0.00 6.09 37.31 5.03
151 152 2.108514 CGGTGATGCATTGGAGCGT 61.109 57.895 0.00 0.00 37.31 5.07
152 153 1.647545 CGGTGATGCATTGGAGCGTT 61.648 55.000 0.00 0.00 37.31 4.84
153 154 0.179156 GGTGATGCATTGGAGCGTTG 60.179 55.000 0.00 0.00 37.31 4.10
154 155 0.523072 GTGATGCATTGGAGCGTTGT 59.477 50.000 0.00 0.00 37.31 3.32
155 156 1.068333 GTGATGCATTGGAGCGTTGTT 60.068 47.619 0.00 0.00 37.31 2.83
156 157 1.068402 TGATGCATTGGAGCGTTGTTG 60.068 47.619 0.00 0.00 37.31 3.33
157 158 0.244450 ATGCATTGGAGCGTTGTTGG 59.756 50.000 0.00 0.00 37.31 3.77
158 159 1.106351 TGCATTGGAGCGTTGTTGGT 61.106 50.000 0.00 0.00 37.31 3.67
159 160 0.664166 GCATTGGAGCGTTGTTGGTG 60.664 55.000 0.00 0.00 0.00 4.17
160 161 0.664166 CATTGGAGCGTTGTTGGTGC 60.664 55.000 0.00 0.00 0.00 5.01
161 162 0.823356 ATTGGAGCGTTGTTGGTGCT 60.823 50.000 0.00 0.00 42.73 4.40
162 163 1.723608 TTGGAGCGTTGTTGGTGCTG 61.724 55.000 0.00 0.00 39.49 4.41
163 164 2.050985 GAGCGTTGTTGGTGCTGC 60.051 61.111 0.00 0.00 39.49 5.25
164 165 2.828095 AGCGTTGTTGGTGCTGCA 60.828 55.556 0.00 0.00 37.62 4.41
165 166 2.103934 GCGTTGTTGGTGCTGCAA 59.896 55.556 2.77 0.00 0.00 4.08
166 167 1.300080 GCGTTGTTGGTGCTGCAAT 60.300 52.632 2.77 0.00 0.00 3.56
167 168 1.550659 GCGTTGTTGGTGCTGCAATG 61.551 55.000 2.77 0.00 33.62 2.82
168 169 0.940519 CGTTGTTGGTGCTGCAATGG 60.941 55.000 2.77 0.00 0.00 3.16
169 170 0.388659 GTTGTTGGTGCTGCAATGGA 59.611 50.000 2.77 0.00 0.00 3.41
170 171 0.675083 TTGTTGGTGCTGCAATGGAG 59.325 50.000 2.77 0.00 0.00 3.86
171 172 1.080298 GTTGGTGCTGCAATGGAGC 60.080 57.895 19.99 19.99 36.95 4.70
172 173 1.228644 TTGGTGCTGCAATGGAGCT 60.229 52.632 26.10 0.00 37.35 4.09
173 174 0.828762 TTGGTGCTGCAATGGAGCTT 60.829 50.000 26.10 0.00 37.35 3.74
174 175 1.246056 TGGTGCTGCAATGGAGCTTC 61.246 55.000 26.10 18.24 37.35 3.86
175 176 1.136147 GTGCTGCAATGGAGCTTCG 59.864 57.895 26.10 0.00 37.35 3.79
176 177 2.101770 GCTGCAATGGAGCTTCGC 59.898 61.111 19.55 0.00 33.37 4.70
177 178 2.796651 CTGCAATGGAGCTTCGCC 59.203 61.111 0.00 0.00 34.99 5.54
178 179 2.033911 TGCAATGGAGCTTCGCCA 59.966 55.556 0.00 0.00 37.78 5.69
179 180 1.989966 CTGCAATGGAGCTTCGCCAG 61.990 60.000 0.00 0.00 36.65 4.85
187 188 4.430423 GCTTCGCCAGCGTTGTCG 62.430 66.667 12.32 0.00 39.29 4.35
188 189 3.777925 CTTCGCCAGCGTTGTCGG 61.778 66.667 12.32 0.00 40.74 4.79
190 191 3.210223 TTCGCCAGCGTTGTCGGTA 62.210 57.895 12.32 0.00 46.12 4.02
191 192 3.475774 CGCCAGCGTTGTCGGTAC 61.476 66.667 3.35 0.00 46.12 3.34
192 193 2.048503 GCCAGCGTTGTCGGTACT 60.049 61.111 0.00 0.00 46.12 2.73
193 194 2.380410 GCCAGCGTTGTCGGTACTG 61.380 63.158 0.00 0.00 46.12 2.74
194 195 2.380410 CCAGCGTTGTCGGTACTGC 61.380 63.158 0.00 0.00 46.12 4.40
195 196 2.430244 AGCGTTGTCGGTACTGCG 60.430 61.111 0.00 0.00 46.01 5.18
196 197 2.732094 GCGTTGTCGGTACTGCGT 60.732 61.111 0.00 0.00 37.56 5.24
197 198 2.305127 GCGTTGTCGGTACTGCGTT 61.305 57.895 0.00 0.00 37.56 4.84
198 199 1.485514 CGTTGTCGGTACTGCGTTG 59.514 57.895 0.00 0.00 0.00 4.10
199 200 1.210545 CGTTGTCGGTACTGCGTTGT 61.211 55.000 0.00 0.00 0.00 3.32
200 201 1.769733 GTTGTCGGTACTGCGTTGTA 58.230 50.000 0.00 0.00 0.00 2.41
201 202 1.717645 GTTGTCGGTACTGCGTTGTAG 59.282 52.381 0.00 0.00 0.00 2.74
202 203 0.387622 TGTCGGTACTGCGTTGTAGC 60.388 55.000 0.00 8.40 37.51 3.58
203 204 0.109412 GTCGGTACTGCGTTGTAGCT 60.109 55.000 13.89 0.00 38.38 3.32
204 205 0.599558 TCGGTACTGCGTTGTAGCTT 59.400 50.000 13.89 0.00 38.38 3.74
205 206 1.000060 TCGGTACTGCGTTGTAGCTTT 60.000 47.619 13.89 0.00 38.38 3.51
206 207 1.126113 CGGTACTGCGTTGTAGCTTTG 59.874 52.381 13.89 0.53 38.38 2.77
207 208 2.140717 GGTACTGCGTTGTAGCTTTGT 58.859 47.619 0.00 0.00 37.77 2.83
208 209 2.157085 GGTACTGCGTTGTAGCTTTGTC 59.843 50.000 0.00 0.00 37.77 3.18
209 210 2.240493 ACTGCGTTGTAGCTTTGTCT 57.760 45.000 0.00 0.00 38.13 3.41
210 211 2.135933 ACTGCGTTGTAGCTTTGTCTC 58.864 47.619 0.00 0.00 38.13 3.36
211 212 2.135139 CTGCGTTGTAGCTTTGTCTCA 58.865 47.619 0.00 0.00 38.13 3.27
212 213 1.864711 TGCGTTGTAGCTTTGTCTCAC 59.135 47.619 0.00 0.00 38.13 3.51
213 214 1.194772 GCGTTGTAGCTTTGTCTCACC 59.805 52.381 0.00 0.00 0.00 4.02
214 215 1.798813 CGTTGTAGCTTTGTCTCACCC 59.201 52.381 0.00 0.00 0.00 4.61
215 216 2.152016 GTTGTAGCTTTGTCTCACCCC 58.848 52.381 0.00 0.00 0.00 4.95
216 217 1.729586 TGTAGCTTTGTCTCACCCCT 58.270 50.000 0.00 0.00 0.00 4.79
217 218 1.347707 TGTAGCTTTGTCTCACCCCTG 59.652 52.381 0.00 0.00 0.00 4.45
218 219 0.984230 TAGCTTTGTCTCACCCCTGG 59.016 55.000 0.00 0.00 0.00 4.45
219 220 1.303643 GCTTTGTCTCACCCCTGGG 60.304 63.158 5.50 5.50 42.03 4.45
220 221 1.779061 GCTTTGTCTCACCCCTGGGA 61.779 60.000 16.20 0.00 38.96 4.37
221 222 0.995024 CTTTGTCTCACCCCTGGGAT 59.005 55.000 16.20 0.00 38.96 3.85
222 223 1.355720 CTTTGTCTCACCCCTGGGATT 59.644 52.381 16.20 0.00 38.96 3.01
223 224 0.698238 TTGTCTCACCCCTGGGATTG 59.302 55.000 16.20 11.16 38.96 2.67
224 225 1.077429 GTCTCACCCCTGGGATTGC 60.077 63.158 16.20 0.00 38.96 3.56
225 226 1.541118 TCTCACCCCTGGGATTGCA 60.541 57.895 16.20 0.00 38.96 4.08
226 227 1.077212 CTCACCCCTGGGATTGCAG 60.077 63.158 16.20 6.80 38.96 4.41
227 228 1.852157 TCACCCCTGGGATTGCAGT 60.852 57.895 16.20 0.00 38.96 4.40
228 229 1.679977 CACCCCTGGGATTGCAGTG 60.680 63.158 16.20 8.77 38.96 3.66
229 230 2.043652 CCCCTGGGATTGCAGTGG 60.044 66.667 16.20 0.00 37.50 4.00
230 231 2.615465 CCCCTGGGATTGCAGTGGA 61.615 63.158 16.20 0.00 37.50 4.02
231 232 1.077212 CCCTGGGATTGCAGTGGAG 60.077 63.158 7.01 0.00 0.00 3.86
232 233 1.751927 CCTGGGATTGCAGTGGAGC 60.752 63.158 0.00 0.00 0.00 4.70
233 234 1.302285 CTGGGATTGCAGTGGAGCT 59.698 57.895 0.00 0.00 34.99 4.09
584 585 4.393155 TGCTGCGCCAGATCCGTT 62.393 61.111 4.18 0.00 32.44 4.44
585 586 3.567797 GCTGCGCCAGATCCGTTC 61.568 66.667 4.18 0.00 32.44 3.95
586 587 2.125552 CTGCGCCAGATCCGTTCA 60.126 61.111 4.18 0.00 32.44 3.18
587 588 2.434185 TGCGCCAGATCCGTTCAC 60.434 61.111 4.18 0.00 0.00 3.18
588 589 3.195698 GCGCCAGATCCGTTCACC 61.196 66.667 0.00 0.00 0.00 4.02
589 590 2.264480 CGCCAGATCCGTTCACCA 59.736 61.111 0.00 0.00 0.00 4.17
590 591 1.375396 CGCCAGATCCGTTCACCAA 60.375 57.895 0.00 0.00 0.00 3.67
591 592 1.635663 CGCCAGATCCGTTCACCAAC 61.636 60.000 0.00 0.00 0.00 3.77
599 600 4.397348 GTTCACCAACGCCCAGAT 57.603 55.556 0.00 0.00 0.00 2.90
600 601 2.171635 GTTCACCAACGCCCAGATC 58.828 57.895 0.00 0.00 0.00 2.75
601 602 1.375396 TTCACCAACGCCCAGATCG 60.375 57.895 0.00 0.00 0.00 3.69
602 603 2.796483 TTCACCAACGCCCAGATCGG 62.796 60.000 0.00 0.00 0.00 4.18
603 604 3.000819 ACCAACGCCCAGATCGGA 61.001 61.111 5.32 0.00 36.56 4.55
604 605 2.511600 CCAACGCCCAGATCGGAC 60.512 66.667 5.32 0.00 36.56 4.79
605 606 2.885644 CAACGCCCAGATCGGACG 60.886 66.667 9.85 9.85 36.56 4.79
606 607 4.143333 AACGCCCAGATCGGACGG 62.143 66.667 14.36 1.42 36.56 4.79
625 626 3.396951 CCGGTTAGGCGGATGATTT 57.603 52.632 0.00 0.00 0.00 2.17
626 627 2.536761 CCGGTTAGGCGGATGATTTA 57.463 50.000 0.00 0.00 0.00 1.40
627 628 2.841215 CCGGTTAGGCGGATGATTTAA 58.159 47.619 0.00 0.00 0.00 1.52
628 629 3.207778 CCGGTTAGGCGGATGATTTAAA 58.792 45.455 0.00 0.00 0.00 1.52
629 630 3.818773 CCGGTTAGGCGGATGATTTAAAT 59.181 43.478 0.00 0.00 0.00 1.40
630 631 4.277423 CCGGTTAGGCGGATGATTTAAATT 59.723 41.667 1.43 0.00 0.00 1.82
631 632 5.449304 CGGTTAGGCGGATGATTTAAATTC 58.551 41.667 1.43 0.00 0.00 2.17
632 633 5.449304 GGTTAGGCGGATGATTTAAATTCG 58.551 41.667 1.43 6.09 0.00 3.34
633 634 5.237779 GGTTAGGCGGATGATTTAAATTCGA 59.762 40.000 1.43 0.00 0.00 3.71
634 635 6.072673 GGTTAGGCGGATGATTTAAATTCGAT 60.073 38.462 1.43 0.00 0.00 3.59
635 636 5.613358 AGGCGGATGATTTAAATTCGATC 57.387 39.130 1.43 5.01 0.00 3.69
636 637 4.455877 AGGCGGATGATTTAAATTCGATCC 59.544 41.667 17.22 17.22 0.00 3.36
638 639 4.957971 CGGATGATTTAAATTCGATCCGG 58.042 43.478 28.63 19.04 45.52 5.14
639 640 4.688879 CGGATGATTTAAATTCGATCCGGA 59.311 41.667 28.63 6.61 45.52 5.14
640 641 5.351465 CGGATGATTTAAATTCGATCCGGAT 59.649 40.000 28.63 19.21 45.52 4.18
641 642 6.546395 GGATGATTTAAATTCGATCCGGATG 58.454 40.000 24.82 14.35 0.00 3.51
642 643 6.371548 GGATGATTTAAATTCGATCCGGATGA 59.628 38.462 24.82 16.53 0.00 2.92
643 644 7.094805 GGATGATTTAAATTCGATCCGGATGAA 60.095 37.037 24.82 23.59 0.00 2.57
644 645 6.954944 TGATTTAAATTCGATCCGGATGAAC 58.045 36.000 24.82 6.62 0.00 3.18
645 646 6.540551 TGATTTAAATTCGATCCGGATGAACA 59.459 34.615 24.82 13.74 0.00 3.18
646 647 5.728351 TTAAATTCGATCCGGATGAACAC 57.272 39.130 24.82 5.76 0.00 3.32
647 648 3.543680 AATTCGATCCGGATGAACACT 57.456 42.857 24.82 10.76 0.00 3.55
648 649 4.665833 AATTCGATCCGGATGAACACTA 57.334 40.909 24.82 4.81 0.00 2.74
649 650 4.665833 ATTCGATCCGGATGAACACTAA 57.334 40.909 24.82 5.57 0.00 2.24
650 651 4.665833 TTCGATCCGGATGAACACTAAT 57.334 40.909 24.82 0.00 0.00 1.73
651 652 4.665833 TCGATCCGGATGAACACTAATT 57.334 40.909 24.82 0.00 0.00 1.40
652 653 5.777850 TCGATCCGGATGAACACTAATTA 57.222 39.130 24.82 0.00 0.00 1.40
653 654 6.151663 TCGATCCGGATGAACACTAATTAA 57.848 37.500 24.82 0.00 0.00 1.40
654 655 6.755206 TCGATCCGGATGAACACTAATTAAT 58.245 36.000 24.82 0.00 0.00 1.40
655 656 6.866770 TCGATCCGGATGAACACTAATTAATC 59.133 38.462 24.82 0.49 0.00 1.75
656 657 6.868864 CGATCCGGATGAACACTAATTAATCT 59.131 38.462 24.82 0.00 0.00 2.40
657 658 8.027189 CGATCCGGATGAACACTAATTAATCTA 58.973 37.037 24.82 0.00 0.00 1.98
658 659 9.877178 GATCCGGATGAACACTAATTAATCTAT 57.123 33.333 24.82 0.00 0.00 1.98
669 670 8.965172 ACACTAATTAATCTATAAAGTGACGCG 58.035 33.333 3.53 3.53 37.04 6.01
670 671 9.177304 CACTAATTAATCTATAAAGTGACGCGA 57.823 33.333 15.93 0.00 35.93 5.87
671 672 9.395707 ACTAATTAATCTATAAAGTGACGCGAG 57.604 33.333 15.93 0.00 0.00 5.03
683 684 2.399856 ACGCGAGTTTTGGCAAAGA 58.600 47.368 15.93 1.99 46.40 2.52
684 685 0.736053 ACGCGAGTTTTGGCAAAGAA 59.264 45.000 15.93 0.00 46.40 2.52
685 686 1.133407 ACGCGAGTTTTGGCAAAGAAA 59.867 42.857 15.93 0.00 46.40 2.52
686 687 2.189342 CGCGAGTTTTGGCAAAGAAAA 58.811 42.857 13.04 0.00 0.00 2.29
687 688 2.600867 CGCGAGTTTTGGCAAAGAAAAA 59.399 40.909 13.04 0.00 0.00 1.94
737 738 4.850859 AAAAACTAACCTTTTGCGTTGC 57.149 36.364 0.00 0.00 0.00 4.17
738 739 3.512033 AAACTAACCTTTTGCGTTGCA 57.488 38.095 0.00 0.00 36.47 4.08
749 750 3.766676 TTGCGTTGCAAGAAACTTACA 57.233 38.095 0.00 0.00 43.99 2.41
750 751 3.766676 TGCGTTGCAAGAAACTTACAA 57.233 38.095 0.00 0.00 34.76 2.41
751 752 4.098055 TGCGTTGCAAGAAACTTACAAA 57.902 36.364 0.00 0.00 34.76 2.83
752 753 4.486090 TGCGTTGCAAGAAACTTACAAAA 58.514 34.783 0.00 0.00 34.76 2.44
753 754 4.923871 TGCGTTGCAAGAAACTTACAAAAA 59.076 33.333 0.00 0.00 34.76 1.94
754 755 5.578727 TGCGTTGCAAGAAACTTACAAAAAT 59.421 32.000 0.00 0.00 34.76 1.82
755 756 6.752351 TGCGTTGCAAGAAACTTACAAAAATA 59.248 30.769 0.00 0.00 34.76 1.40
756 757 7.275779 TGCGTTGCAAGAAACTTACAAAAATAA 59.724 29.630 0.00 0.00 34.76 1.40
757 758 8.272866 GCGTTGCAAGAAACTTACAAAAATAAT 58.727 29.630 0.00 0.00 0.00 1.28
758 759 9.566624 CGTTGCAAGAAACTTACAAAAATAATG 57.433 29.630 0.00 0.00 0.00 1.90
759 760 9.368921 GTTGCAAGAAACTTACAAAAATAATGC 57.631 29.630 0.00 0.00 0.00 3.56
760 761 7.782242 TGCAAGAAACTTACAAAAATAATGCG 58.218 30.769 0.00 0.00 0.00 4.73
761 762 6.731948 GCAAGAAACTTACAAAAATAATGCGC 59.268 34.615 0.00 0.00 0.00 6.09
762 763 7.568497 GCAAGAAACTTACAAAAATAATGCGCA 60.568 33.333 14.96 14.96 0.00 6.09
763 764 8.434661 CAAGAAACTTACAAAAATAATGCGCAT 58.565 29.630 19.28 19.28 0.00 4.73
764 765 8.173321 AGAAACTTACAAAAATAATGCGCATC 57.827 30.769 25.53 5.40 0.00 3.91
765 766 6.553255 AACTTACAAAAATAATGCGCATCG 57.447 33.333 25.53 8.72 0.00 3.84
766 767 5.034152 ACTTACAAAAATAATGCGCATCGG 58.966 37.500 25.53 10.38 0.00 4.18
767 768 3.773860 ACAAAAATAATGCGCATCGGA 57.226 38.095 25.53 12.72 0.00 4.55
768 769 4.103365 ACAAAAATAATGCGCATCGGAA 57.897 36.364 25.53 10.20 0.00 4.30
769 770 4.489810 ACAAAAATAATGCGCATCGGAAA 58.510 34.783 25.53 7.55 0.00 3.13
770 771 5.108517 ACAAAAATAATGCGCATCGGAAAT 58.891 33.333 25.53 9.49 0.00 2.17
771 772 6.269315 ACAAAAATAATGCGCATCGGAAATA 58.731 32.000 25.53 11.65 0.00 1.40
772 773 6.417635 ACAAAAATAATGCGCATCGGAAATAG 59.582 34.615 25.53 12.79 0.00 1.73
773 774 5.689383 AAATAATGCGCATCGGAAATAGT 57.311 34.783 25.53 7.54 0.00 2.12
774 775 4.668576 ATAATGCGCATCGGAAATAGTG 57.331 40.909 25.53 0.00 0.00 2.74
775 776 1.229428 ATGCGCATCGGAAATAGTGG 58.771 50.000 19.28 0.00 0.00 4.00
776 777 0.107897 TGCGCATCGGAAATAGTGGT 60.108 50.000 5.66 0.00 0.00 4.16
850 852 1.204704 CTACGTGCTCCACAGATTCCA 59.795 52.381 0.00 0.00 33.40 3.53
929 932 0.321653 AGTGATCCGACAAGCCAACC 60.322 55.000 0.00 0.00 0.00 3.77
930 933 0.605319 GTGATCCGACAAGCCAACCA 60.605 55.000 0.00 0.00 0.00 3.67
985 988 3.625897 CCACGCTCCACCCAGTCA 61.626 66.667 0.00 0.00 0.00 3.41
986 989 2.357517 CACGCTCCACCCAGTCAC 60.358 66.667 0.00 0.00 0.00 3.67
987 990 2.842462 ACGCTCCACCCAGTCACA 60.842 61.111 0.00 0.00 0.00 3.58
988 991 2.357517 CGCTCCACCCAGTCACAC 60.358 66.667 0.00 0.00 0.00 3.82
989 992 2.828868 GCTCCACCCAGTCACACA 59.171 61.111 0.00 0.00 0.00 3.72
990 993 1.598130 GCTCCACCCAGTCACACAC 60.598 63.158 0.00 0.00 0.00 3.82
991 994 1.071471 CTCCACCCAGTCACACACC 59.929 63.158 0.00 0.00 0.00 4.16
992 995 1.383943 TCCACCCAGTCACACACCT 60.384 57.895 0.00 0.00 0.00 4.00
993 996 1.071471 CCACCCAGTCACACACCTC 59.929 63.158 0.00 0.00 0.00 3.85
994 997 1.300931 CACCCAGTCACACACCTCG 60.301 63.158 0.00 0.00 0.00 4.63
995 998 1.456892 ACCCAGTCACACACCTCGA 60.457 57.895 0.00 0.00 0.00 4.04
996 999 0.832135 ACCCAGTCACACACCTCGAT 60.832 55.000 0.00 0.00 0.00 3.59
997 1000 0.108615 CCCAGTCACACACCTCGATC 60.109 60.000 0.00 0.00 0.00 3.69
998 1001 0.603065 CCAGTCACACACCTCGATCA 59.397 55.000 0.00 0.00 0.00 2.92
999 1002 1.670087 CCAGTCACACACCTCGATCAC 60.670 57.143 0.00 0.00 0.00 3.06
1004 1029 0.033504 ACACACCTCGATCACACACC 59.966 55.000 0.00 0.00 0.00 4.16
1186 1211 3.443925 CAGACTCCCGAGAGCGCA 61.444 66.667 11.47 0.00 44.65 6.09
1253 1278 1.021202 CAACTTCAACGCCCAGTTCA 58.979 50.000 0.00 0.00 42.02 3.18
1254 1279 1.403679 CAACTTCAACGCCCAGTTCAA 59.596 47.619 0.00 0.00 42.02 2.69
1480 1505 1.662044 GGTGTACACGACGGACCTT 59.338 57.895 19.41 0.00 0.00 3.50
1608 1633 2.355481 GGCGTTCGACTTCCACGT 60.355 61.111 8.24 0.00 36.29 4.49
1790 1815 4.704103 AGACCCTCGAGCCCTGCA 62.704 66.667 6.99 0.00 0.00 4.41
1870 1895 3.372730 GGCTGCCGTTGGATTGCA 61.373 61.111 1.35 0.00 0.00 4.08
1960 1990 1.358445 ACCTCGGTTACCTCTCTCCTT 59.642 52.381 0.00 0.00 0.00 3.36
1978 2008 1.847798 TTAACCCGGAGCTGCACCAT 61.848 55.000 16.29 2.02 0.00 3.55
2158 2188 2.157073 GCCGGACGCGAAGTACTTC 61.157 63.158 23.25 23.25 36.29 3.01
2191 2221 1.292223 CTTCTTCAAGTCGCCCGGA 59.708 57.895 0.73 0.00 0.00 5.14
2314 2344 3.391665 CTCCGCTGGCCCGATCTTT 62.392 63.158 0.00 0.00 0.00 2.52
2419 2449 2.932234 CGTGAAGGAGCTGACCCGT 61.932 63.158 0.00 0.00 0.00 5.28
2675 2705 2.203070 GCATCTACCTGGTGCGGG 60.203 66.667 10.23 0.00 35.68 6.13
3043 3073 2.910479 TCCTGCGACGTGTGAGGT 60.910 61.111 0.00 0.00 0.00 3.85
3046 3076 4.961511 TGCGACGTGTGAGGTGCC 62.962 66.667 0.00 0.00 0.00 5.01
3105 3140 4.365723 GAGTGGCTTCGGTCGATAATAAA 58.634 43.478 0.00 0.00 0.00 1.40
3232 3270 7.371159 TCTGTTGTCAGATAAAGTAGTGTCAG 58.629 38.462 0.00 0.00 44.58 3.51
3236 3274 6.678878 TGTCAGATAAAGTAGTGTCAGTGAC 58.321 40.000 16.68 16.68 0.00 3.67
3241 3279 2.821991 AGTAGTGTCAGTGACAAGGC 57.178 50.000 27.03 18.19 44.49 4.35
3243 3281 2.036475 AGTAGTGTCAGTGACAAGGCTG 59.964 50.000 27.03 0.00 44.49 4.85
3247 3285 0.946221 GTCAGTGACAAGGCTGGACG 60.946 60.000 18.54 0.00 33.81 4.79
3248 3286 1.069765 CAGTGACAAGGCTGGACGT 59.930 57.895 0.00 0.00 0.00 4.34
3252 3290 0.032952 TGACAAGGCTGGACGTGTAC 59.967 55.000 0.00 0.00 33.27 2.90
3265 3303 0.806868 CGTGTACGTCCTTCTGCCTA 59.193 55.000 0.00 0.00 34.11 3.93
3271 3309 1.968493 ACGTCCTTCTGCCTAAAGACA 59.032 47.619 0.00 0.00 0.00 3.41
3272 3310 2.028930 ACGTCCTTCTGCCTAAAGACAG 60.029 50.000 0.00 0.00 35.15 3.51
3273 3311 2.231478 CGTCCTTCTGCCTAAAGACAGA 59.769 50.000 0.00 0.00 41.06 3.41
3274 3312 3.591023 GTCCTTCTGCCTAAAGACAGAC 58.409 50.000 0.00 0.00 42.42 3.51
3275 3313 2.231478 TCCTTCTGCCTAAAGACAGACG 59.769 50.000 0.00 0.00 42.42 4.18
3276 3314 2.611518 CTTCTGCCTAAAGACAGACGG 58.388 52.381 0.00 0.00 42.42 4.79
3277 3315 1.919240 TCTGCCTAAAGACAGACGGA 58.081 50.000 0.00 0.00 37.99 4.69
3278 3316 1.544691 TCTGCCTAAAGACAGACGGAC 59.455 52.381 0.00 0.00 37.99 4.79
3279 3317 1.272490 CTGCCTAAAGACAGACGGACA 59.728 52.381 0.00 0.00 35.90 4.02
3280 3318 1.689813 TGCCTAAAGACAGACGGACAA 59.310 47.619 0.00 0.00 0.00 3.18
3281 3319 2.301870 TGCCTAAAGACAGACGGACAAT 59.698 45.455 0.00 0.00 0.00 2.71
3282 3320 3.512329 TGCCTAAAGACAGACGGACAATA 59.488 43.478 0.00 0.00 0.00 1.90
3283 3321 3.864003 GCCTAAAGACAGACGGACAATAC 59.136 47.826 0.00 0.00 0.00 1.89
3284 3322 4.103357 CCTAAAGACAGACGGACAATACG 58.897 47.826 0.00 0.00 37.36 3.06
3286 3324 4.771590 AAAGACAGACGGACAATACGTA 57.228 40.909 0.00 0.00 45.68 3.57
3287 3325 4.978083 AAGACAGACGGACAATACGTAT 57.022 40.909 1.14 1.14 45.68 3.06
3288 3326 4.548991 AGACAGACGGACAATACGTATC 57.451 45.455 8.86 0.00 45.68 2.24
3289 3327 3.314635 AGACAGACGGACAATACGTATCC 59.685 47.826 8.86 6.08 45.68 2.59
3294 3332 1.779569 GGACAATACGTATCCGGCTG 58.220 55.000 8.86 5.61 38.78 4.85
3295 3333 1.338973 GGACAATACGTATCCGGCTGA 59.661 52.381 8.86 0.00 38.78 4.26
3296 3334 2.029290 GGACAATACGTATCCGGCTGAT 60.029 50.000 8.86 0.00 38.78 2.90
3297 3335 3.554337 GGACAATACGTATCCGGCTGATT 60.554 47.826 8.86 0.00 38.78 2.57
3298 3336 3.650139 ACAATACGTATCCGGCTGATTC 58.350 45.455 8.86 0.00 38.78 2.52
3299 3337 3.069016 ACAATACGTATCCGGCTGATTCA 59.931 43.478 8.86 0.00 38.78 2.57
3300 3338 4.055360 CAATACGTATCCGGCTGATTCAA 58.945 43.478 8.86 0.00 38.78 2.69
3301 3339 1.935933 ACGTATCCGGCTGATTCAAC 58.064 50.000 0.00 0.00 38.78 3.18
3302 3340 1.217882 CGTATCCGGCTGATTCAACC 58.782 55.000 0.00 0.00 34.76 3.77
3303 3341 1.472552 CGTATCCGGCTGATTCAACCA 60.473 52.381 6.89 0.00 34.76 3.67
3304 3342 1.940613 GTATCCGGCTGATTCAACCAC 59.059 52.381 6.89 0.00 34.76 4.16
3305 3343 0.327924 ATCCGGCTGATTCAACCACA 59.672 50.000 6.89 0.00 0.00 4.17
3306 3344 0.109532 TCCGGCTGATTCAACCACAA 59.890 50.000 6.89 0.00 0.00 3.33
3307 3345 0.958091 CCGGCTGATTCAACCACAAA 59.042 50.000 6.89 0.00 0.00 2.83
3308 3346 1.068333 CCGGCTGATTCAACCACAAAG 60.068 52.381 6.89 0.00 0.00 2.77
3309 3347 1.666888 CGGCTGATTCAACCACAAAGC 60.667 52.381 6.89 0.00 0.00 3.51
3310 3348 1.340889 GGCTGATTCAACCACAAAGCA 59.659 47.619 1.09 0.00 0.00 3.91
3311 3349 2.608752 GGCTGATTCAACCACAAAGCAG 60.609 50.000 1.09 0.00 40.83 4.24
3312 3350 2.035066 GCTGATTCAACCACAAAGCAGT 59.965 45.455 2.81 0.00 40.20 4.40
3313 3351 3.854784 GCTGATTCAACCACAAAGCAGTC 60.855 47.826 2.81 0.00 40.20 3.51
3314 3352 2.290367 TGATTCAACCACAAAGCAGTCG 59.710 45.455 0.00 0.00 0.00 4.18
3315 3353 1.745232 TTCAACCACAAAGCAGTCGT 58.255 45.000 0.00 0.00 0.00 4.34
3316 3354 1.295792 TCAACCACAAAGCAGTCGTC 58.704 50.000 0.00 0.00 0.00 4.20
3317 3355 1.013596 CAACCACAAAGCAGTCGTCA 58.986 50.000 0.00 0.00 0.00 4.35
3318 3356 1.603802 CAACCACAAAGCAGTCGTCAT 59.396 47.619 0.00 0.00 0.00 3.06
3319 3357 1.967319 ACCACAAAGCAGTCGTCATT 58.033 45.000 0.00 0.00 0.00 2.57
3320 3358 1.873591 ACCACAAAGCAGTCGTCATTC 59.126 47.619 0.00 0.00 0.00 2.67
3321 3359 1.197721 CCACAAAGCAGTCGTCATTCC 59.802 52.381 0.00 0.00 0.00 3.01
3322 3360 1.197721 CACAAAGCAGTCGTCATTCCC 59.802 52.381 0.00 0.00 0.00 3.97
3323 3361 1.202758 ACAAAGCAGTCGTCATTCCCA 60.203 47.619 0.00 0.00 0.00 4.37
3324 3362 2.086869 CAAAGCAGTCGTCATTCCCAT 58.913 47.619 0.00 0.00 0.00 4.00
3325 3363 2.029838 AAGCAGTCGTCATTCCCATC 57.970 50.000 0.00 0.00 0.00 3.51
3326 3364 0.179000 AGCAGTCGTCATTCCCATCC 59.821 55.000 0.00 0.00 0.00 3.51
3327 3365 0.815615 GCAGTCGTCATTCCCATCCC 60.816 60.000 0.00 0.00 0.00 3.85
3328 3366 0.833287 CAGTCGTCATTCCCATCCCT 59.167 55.000 0.00 0.00 0.00 4.20
3329 3367 1.123928 AGTCGTCATTCCCATCCCTC 58.876 55.000 0.00 0.00 0.00 4.30
3330 3368 0.106894 GTCGTCATTCCCATCCCTCC 59.893 60.000 0.00 0.00 0.00 4.30
3331 3369 0.031111 TCGTCATTCCCATCCCTCCT 60.031 55.000 0.00 0.00 0.00 3.69
3332 3370 0.394565 CGTCATTCCCATCCCTCCTC 59.605 60.000 0.00 0.00 0.00 3.71
3333 3371 1.813102 GTCATTCCCATCCCTCCTCT 58.187 55.000 0.00 0.00 0.00 3.69
3334 3372 2.131023 GTCATTCCCATCCCTCCTCTT 58.869 52.381 0.00 0.00 0.00 2.85
3335 3373 2.105649 GTCATTCCCATCCCTCCTCTTC 59.894 54.545 0.00 0.00 0.00 2.87
3336 3374 2.021639 TCATTCCCATCCCTCCTCTTCT 60.022 50.000 0.00 0.00 0.00 2.85
3337 3375 2.668850 TTCCCATCCCTCCTCTTCTT 57.331 50.000 0.00 0.00 0.00 2.52
3338 3376 1.885049 TCCCATCCCTCCTCTTCTTG 58.115 55.000 0.00 0.00 0.00 3.02
3339 3377 1.081174 TCCCATCCCTCCTCTTCTTGT 59.919 52.381 0.00 0.00 0.00 3.16
3340 3378 1.488393 CCCATCCCTCCTCTTCTTGTC 59.512 57.143 0.00 0.00 0.00 3.18
3341 3379 1.488393 CCATCCCTCCTCTTCTTGTCC 59.512 57.143 0.00 0.00 0.00 4.02
3342 3380 1.137872 CATCCCTCCTCTTCTTGTCCG 59.862 57.143 0.00 0.00 0.00 4.79
3343 3381 0.408309 TCCCTCCTCTTCTTGTCCGA 59.592 55.000 0.00 0.00 0.00 4.55
3344 3382 0.820871 CCCTCCTCTTCTTGTCCGAG 59.179 60.000 0.00 0.00 0.00 4.63
3345 3383 1.617263 CCCTCCTCTTCTTGTCCGAGA 60.617 57.143 0.00 0.00 0.00 4.04
3346 3384 1.474879 CCTCCTCTTCTTGTCCGAGAC 59.525 57.143 0.00 0.00 0.00 3.36
3347 3385 2.163509 CTCCTCTTCTTGTCCGAGACA 58.836 52.381 3.02 3.02 41.09 3.41
3356 3394 2.347697 TGTCCGAGACAAAGATGACG 57.652 50.000 4.51 0.00 39.78 4.35
3357 3395 1.067846 TGTCCGAGACAAAGATGACGG 60.068 52.381 0.00 0.00 39.78 4.79
3358 3396 1.201647 GTCCGAGACAAAGATGACGGA 59.798 52.381 0.00 0.00 42.49 4.69
3359 3397 2.100197 TCCGAGACAAAGATGACGGAT 58.900 47.619 0.00 0.00 41.23 4.18
3360 3398 3.066342 GTCCGAGACAAAGATGACGGATA 59.934 47.826 0.00 0.00 44.33 2.59
3361 3399 3.697542 TCCGAGACAAAGATGACGGATAA 59.302 43.478 0.00 0.00 41.23 1.75
3362 3400 4.158949 TCCGAGACAAAGATGACGGATAAA 59.841 41.667 0.00 0.00 41.23 1.40
3363 3401 4.868171 CCGAGACAAAGATGACGGATAAAA 59.132 41.667 0.00 0.00 40.53 1.52
3364 3402 5.350365 CCGAGACAAAGATGACGGATAAAAA 59.650 40.000 0.00 0.00 40.53 1.94
3365 3403 6.455646 CCGAGACAAAGATGACGGATAAAAAG 60.456 42.308 0.00 0.00 40.53 2.27
3366 3404 6.455646 CGAGACAAAGATGACGGATAAAAAGG 60.456 42.308 0.00 0.00 0.00 3.11
3367 3405 5.123979 AGACAAAGATGACGGATAAAAAGGC 59.876 40.000 0.00 0.00 0.00 4.35
3368 3406 4.764823 ACAAAGATGACGGATAAAAAGGCA 59.235 37.500 0.00 0.00 0.00 4.75
3369 3407 5.242838 ACAAAGATGACGGATAAAAAGGCAA 59.757 36.000 0.00 0.00 0.00 4.52
3370 3408 5.567138 AAGATGACGGATAAAAAGGCAAG 57.433 39.130 0.00 0.00 0.00 4.01
3371 3409 4.843728 AGATGACGGATAAAAAGGCAAGA 58.156 39.130 0.00 0.00 0.00 3.02
3372 3410 5.253330 AGATGACGGATAAAAAGGCAAGAA 58.747 37.500 0.00 0.00 0.00 2.52
3373 3411 5.710099 AGATGACGGATAAAAAGGCAAGAAA 59.290 36.000 0.00 0.00 0.00 2.52
3374 3412 5.116069 TGACGGATAAAAAGGCAAGAAAC 57.884 39.130 0.00 0.00 0.00 2.78
3375 3413 4.825085 TGACGGATAAAAAGGCAAGAAACT 59.175 37.500 0.00 0.00 0.00 2.66
3376 3414 5.300792 TGACGGATAAAAAGGCAAGAAACTT 59.699 36.000 0.00 0.00 0.00 2.66
3377 3415 5.769367 ACGGATAAAAAGGCAAGAAACTTC 58.231 37.500 0.00 0.00 0.00 3.01
3378 3416 5.300792 ACGGATAAAAAGGCAAGAAACTTCA 59.699 36.000 0.00 0.00 0.00 3.02
3379 3417 6.015434 ACGGATAAAAAGGCAAGAAACTTCAT 60.015 34.615 0.00 0.00 0.00 2.57
3380 3418 6.308766 CGGATAAAAAGGCAAGAAACTTCATG 59.691 38.462 0.00 0.00 0.00 3.07
3381 3419 7.154656 GGATAAAAAGGCAAGAAACTTCATGT 58.845 34.615 0.00 0.00 0.00 3.21
3389 3427 4.136796 CAAGAAACTTCATGTGGTCAGGA 58.863 43.478 0.00 0.00 32.40 3.86
3395 3433 3.117888 ACTTCATGTGGTCAGGACAACTT 60.118 43.478 8.33 0.00 36.24 2.66
3428 3468 0.031917 TATCCTGTCTGCCCCCGTTA 60.032 55.000 0.00 0.00 0.00 3.18
3516 3556 2.267642 CCGCTTTCGACCCATCCA 59.732 61.111 0.00 0.00 38.10 3.41
3540 3580 0.318275 CCAAGTTTGCGCCGCTTTTA 60.318 50.000 11.67 0.00 0.00 1.52
3976 4019 2.906182 GATCTGCATCGTCGGTGGCA 62.906 60.000 7.76 6.89 34.66 4.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.234821 GGTGCGATGAAACTCCAACA 58.765 50.000 0.00 0.00 0.00 3.33
3 4 0.165944 CGGTGCGATGAAACTCCAAC 59.834 55.000 0.00 0.00 0.00 3.77
6 7 1.683790 CGTCGGTGCGATGAAACTCC 61.684 60.000 0.00 0.00 44.49 3.85
7 8 1.683790 CCGTCGGTGCGATGAAACTC 61.684 60.000 2.08 0.00 44.49 3.01
9 10 2.736682 CCCGTCGGTGCGATGAAAC 61.737 63.158 11.06 0.00 44.49 2.78
11 12 4.444838 CCCCGTCGGTGCGATGAA 62.445 66.667 11.06 0.00 44.49 2.57
20 21 4.776322 TCATTGCAGCCCCGTCGG 62.776 66.667 3.60 3.60 0.00 4.79
21 22 2.745884 TTCATTGCAGCCCCGTCG 60.746 61.111 0.00 0.00 0.00 5.12
22 23 1.675641 ACTTCATTGCAGCCCCGTC 60.676 57.895 0.00 0.00 0.00 4.79
23 24 1.973281 CACTTCATTGCAGCCCCGT 60.973 57.895 0.00 0.00 0.00 5.28
24 25 1.926511 GACACTTCATTGCAGCCCCG 61.927 60.000 0.00 0.00 0.00 5.73
25 26 1.598701 GGACACTTCATTGCAGCCCC 61.599 60.000 0.00 0.00 0.00 5.80
26 27 1.598701 GGGACACTTCATTGCAGCCC 61.599 60.000 0.00 0.00 0.00 5.19
27 28 0.610232 AGGGACACTTCATTGCAGCC 60.610 55.000 0.00 0.00 0.00 4.85
28 29 0.807496 GAGGGACACTTCATTGCAGC 59.193 55.000 0.00 0.00 0.00 5.25
29 30 1.081892 CGAGGGACACTTCATTGCAG 58.918 55.000 0.00 0.00 0.00 4.41
30 31 0.684535 TCGAGGGACACTTCATTGCA 59.315 50.000 0.00 0.00 0.00 4.08
31 32 1.734465 CTTCGAGGGACACTTCATTGC 59.266 52.381 0.00 0.00 0.00 3.56
32 33 1.734465 GCTTCGAGGGACACTTCATTG 59.266 52.381 0.00 0.00 0.00 2.82
33 34 1.625818 AGCTTCGAGGGACACTTCATT 59.374 47.619 0.00 0.00 0.00 2.57
34 35 1.066573 CAGCTTCGAGGGACACTTCAT 60.067 52.381 0.00 0.00 0.00 2.57
35 36 0.318441 CAGCTTCGAGGGACACTTCA 59.682 55.000 0.00 0.00 0.00 3.02
36 37 1.016653 GCAGCTTCGAGGGACACTTC 61.017 60.000 0.00 0.00 0.00 3.01
37 38 1.004440 GCAGCTTCGAGGGACACTT 60.004 57.895 0.00 0.00 0.00 3.16
38 39 1.758440 TTGCAGCTTCGAGGGACACT 61.758 55.000 0.00 0.00 0.00 3.55
39 40 0.884704 TTTGCAGCTTCGAGGGACAC 60.885 55.000 0.00 0.00 0.00 3.67
40 41 0.179032 TTTTGCAGCTTCGAGGGACA 60.179 50.000 0.00 0.00 0.00 4.02
41 42 1.135575 CATTTTGCAGCTTCGAGGGAC 60.136 52.381 0.00 0.00 0.00 4.46
42 43 1.167851 CATTTTGCAGCTTCGAGGGA 58.832 50.000 0.00 0.00 0.00 4.20
43 44 0.171903 CCATTTTGCAGCTTCGAGGG 59.828 55.000 0.00 0.00 0.00 4.30
44 45 1.131883 CTCCATTTTGCAGCTTCGAGG 59.868 52.381 0.00 0.00 0.00 4.63
45 46 1.467035 GCTCCATTTTGCAGCTTCGAG 60.467 52.381 0.00 0.00 0.00 4.04
46 47 0.523072 GCTCCATTTTGCAGCTTCGA 59.477 50.000 0.00 0.00 0.00 3.71
47 48 0.795735 CGCTCCATTTTGCAGCTTCG 60.796 55.000 0.00 0.00 0.00 3.79
48 49 1.074872 GCGCTCCATTTTGCAGCTTC 61.075 55.000 0.00 0.00 0.00 3.86
49 50 1.080298 GCGCTCCATTTTGCAGCTT 60.080 52.632 0.00 0.00 0.00 3.74
50 51 2.570181 GCGCTCCATTTTGCAGCT 59.430 55.556 0.00 0.00 0.00 4.24
51 52 2.507769 GGCGCTCCATTTTGCAGC 60.508 61.111 7.64 0.00 0.00 5.25
52 53 1.153901 CTGGCGCTCCATTTTGCAG 60.154 57.895 7.64 0.00 42.51 4.41
53 54 1.902918 ACTGGCGCTCCATTTTGCA 60.903 52.632 7.64 0.00 42.51 4.08
54 55 1.444895 CACTGGCGCTCCATTTTGC 60.445 57.895 7.64 0.00 42.51 3.68
55 56 1.213537 CCACTGGCGCTCCATTTTG 59.786 57.895 7.64 0.00 42.51 2.44
56 57 1.228552 ACCACTGGCGCTCCATTTT 60.229 52.632 7.64 0.00 42.51 1.82
57 58 1.973281 CACCACTGGCGCTCCATTT 60.973 57.895 7.64 0.00 42.51 2.32
58 59 2.360350 CACCACTGGCGCTCCATT 60.360 61.111 7.64 0.00 42.51 3.16
62 63 3.426568 GAAGCACCACTGGCGCTC 61.427 66.667 11.08 2.07 40.50 5.03
65 66 2.434884 ATCGAAGCACCACTGGCG 60.435 61.111 0.00 0.00 36.08 5.69
66 67 2.401766 CCATCGAAGCACCACTGGC 61.402 63.158 0.00 0.00 0.00 4.85
67 68 0.742281 CTCCATCGAAGCACCACTGG 60.742 60.000 0.00 0.00 0.00 4.00
68 69 1.364626 GCTCCATCGAAGCACCACTG 61.365 60.000 2.70 0.00 39.61 3.66
69 70 1.078848 GCTCCATCGAAGCACCACT 60.079 57.895 2.70 0.00 39.61 4.00
70 71 0.674895 AAGCTCCATCGAAGCACCAC 60.675 55.000 10.07 0.00 42.35 4.16
71 72 0.391661 GAAGCTCCATCGAAGCACCA 60.392 55.000 10.07 0.00 42.35 4.17
72 73 1.424493 CGAAGCTCCATCGAAGCACC 61.424 60.000 10.07 0.79 42.76 5.01
73 74 2.002127 CGAAGCTCCATCGAAGCAC 58.998 57.895 10.07 3.25 42.76 4.40
74 75 4.502263 CGAAGCTCCATCGAAGCA 57.498 55.556 10.07 0.00 42.76 3.91
102 103 2.857592 TTGTAGCCTAACGATCCGTC 57.142 50.000 0.00 0.00 39.99 4.79
103 104 2.223971 CCATTGTAGCCTAACGATCCGT 60.224 50.000 0.00 0.00 43.97 4.69
104 105 2.035449 TCCATTGTAGCCTAACGATCCG 59.965 50.000 0.00 0.00 0.00 4.18
105 106 3.746045 TCCATTGTAGCCTAACGATCC 57.254 47.619 0.00 0.00 0.00 3.36
106 107 5.140747 AGATCCATTGTAGCCTAACGATC 57.859 43.478 0.00 0.00 0.00 3.69
107 108 4.021016 GGAGATCCATTGTAGCCTAACGAT 60.021 45.833 0.00 0.00 35.64 3.73
108 109 3.321111 GGAGATCCATTGTAGCCTAACGA 59.679 47.826 0.00 0.00 35.64 3.85
109 110 3.654414 GGAGATCCATTGTAGCCTAACG 58.346 50.000 0.00 0.00 35.64 3.18
110 111 3.654414 CGGAGATCCATTGTAGCCTAAC 58.346 50.000 0.00 0.00 35.14 2.34
111 112 2.037251 GCGGAGATCCATTGTAGCCTAA 59.963 50.000 0.00 0.00 35.14 2.69
112 113 1.618837 GCGGAGATCCATTGTAGCCTA 59.381 52.381 0.00 0.00 35.14 3.93
113 114 0.394565 GCGGAGATCCATTGTAGCCT 59.605 55.000 0.00 0.00 35.14 4.58
114 115 0.603975 GGCGGAGATCCATTGTAGCC 60.604 60.000 0.00 0.00 36.32 3.93
115 116 0.946221 CGGCGGAGATCCATTGTAGC 60.946 60.000 0.00 0.00 35.14 3.58
116 117 0.319900 CCGGCGGAGATCCATTGTAG 60.320 60.000 24.41 0.00 35.14 2.74
117 118 1.046472 ACCGGCGGAGATCCATTGTA 61.046 55.000 35.78 0.00 35.14 2.41
118 119 2.367202 ACCGGCGGAGATCCATTGT 61.367 57.895 35.78 1.87 35.14 2.71
119 120 1.889105 CACCGGCGGAGATCCATTG 60.889 63.158 35.78 14.19 35.14 2.82
120 121 1.410850 ATCACCGGCGGAGATCCATT 61.411 55.000 35.78 12.14 26.96 3.16
121 122 1.838846 ATCACCGGCGGAGATCCAT 60.839 57.895 35.78 12.57 26.96 3.41
122 123 2.443952 ATCACCGGCGGAGATCCA 60.444 61.111 35.78 9.21 26.96 3.41
123 124 2.029666 CATCACCGGCGGAGATCC 59.970 66.667 35.78 0.00 30.93 3.36
124 125 2.663188 GCATCACCGGCGGAGATC 60.663 66.667 35.78 23.00 30.93 2.75
125 126 2.329539 AATGCATCACCGGCGGAGAT 62.330 55.000 35.78 32.16 33.47 2.75
126 127 3.030168 AATGCATCACCGGCGGAGA 62.030 57.895 35.78 31.34 0.00 3.71
127 128 2.514592 AATGCATCACCGGCGGAG 60.515 61.111 35.78 26.54 0.00 4.63
128 129 2.823593 CAATGCATCACCGGCGGA 60.824 61.111 35.78 12.34 0.00 5.54
129 130 3.891400 CCAATGCATCACCGGCGG 61.891 66.667 27.06 27.06 0.00 6.13
130 131 2.823593 TCCAATGCATCACCGGCG 60.824 61.111 0.00 0.00 0.00 6.46
131 132 3.113745 CTCCAATGCATCACCGGC 58.886 61.111 0.00 0.00 0.00 6.13
132 133 2.827051 CGCTCCAATGCATCACCGG 61.827 63.158 0.00 0.00 0.00 5.28
133 134 1.647545 AACGCTCCAATGCATCACCG 61.648 55.000 0.00 1.66 0.00 4.94
134 135 0.179156 CAACGCTCCAATGCATCACC 60.179 55.000 0.00 0.00 0.00 4.02
135 136 0.523072 ACAACGCTCCAATGCATCAC 59.477 50.000 0.00 0.00 0.00 3.06
136 137 1.068402 CAACAACGCTCCAATGCATCA 60.068 47.619 0.00 0.00 0.00 3.07
137 138 1.621107 CAACAACGCTCCAATGCATC 58.379 50.000 0.00 0.00 0.00 3.91
138 139 0.244450 CCAACAACGCTCCAATGCAT 59.756 50.000 0.00 0.00 0.00 3.96
139 140 1.106351 ACCAACAACGCTCCAATGCA 61.106 50.000 0.00 0.00 0.00 3.96
140 141 0.664166 CACCAACAACGCTCCAATGC 60.664 55.000 0.00 0.00 0.00 3.56
141 142 0.664166 GCACCAACAACGCTCCAATG 60.664 55.000 0.00 0.00 0.00 2.82
142 143 0.823356 AGCACCAACAACGCTCCAAT 60.823 50.000 0.00 0.00 0.00 3.16
143 144 1.453015 AGCACCAACAACGCTCCAA 60.453 52.632 0.00 0.00 0.00 3.53
144 145 2.186160 CAGCACCAACAACGCTCCA 61.186 57.895 0.00 0.00 32.48 3.86
145 146 2.639286 CAGCACCAACAACGCTCC 59.361 61.111 0.00 0.00 32.48 4.70
146 147 2.050985 GCAGCACCAACAACGCTC 60.051 61.111 0.00 0.00 32.48 5.03
147 148 1.737355 ATTGCAGCACCAACAACGCT 61.737 50.000 0.00 0.00 36.10 5.07
148 149 1.300080 ATTGCAGCACCAACAACGC 60.300 52.632 0.00 0.00 0.00 4.84
149 150 0.940519 CCATTGCAGCACCAACAACG 60.941 55.000 0.00 0.00 0.00 4.10
150 151 0.388659 TCCATTGCAGCACCAACAAC 59.611 50.000 0.00 0.00 0.00 3.32
151 152 0.675083 CTCCATTGCAGCACCAACAA 59.325 50.000 0.00 0.00 0.00 2.83
152 153 1.808531 GCTCCATTGCAGCACCAACA 61.809 55.000 0.00 0.00 36.82 3.33
153 154 1.080298 GCTCCATTGCAGCACCAAC 60.080 57.895 0.00 0.00 36.82 3.77
154 155 0.828762 AAGCTCCATTGCAGCACCAA 60.829 50.000 1.78 0.00 39.56 3.67
155 156 1.228644 AAGCTCCATTGCAGCACCA 60.229 52.632 1.78 0.00 39.56 4.17
156 157 1.509923 GAAGCTCCATTGCAGCACC 59.490 57.895 1.78 0.00 39.56 5.01
157 158 1.136147 CGAAGCTCCATTGCAGCAC 59.864 57.895 1.78 0.00 39.56 4.40
158 159 3.582148 CGAAGCTCCATTGCAGCA 58.418 55.556 1.78 0.00 39.56 4.41
175 176 2.048503 AGTACCGACAACGCTGGC 60.049 61.111 0.00 0.00 38.29 4.85
176 177 2.380410 GCAGTACCGACAACGCTGG 61.380 63.158 0.00 0.00 38.29 4.85
177 178 2.716828 CGCAGTACCGACAACGCTG 61.717 63.158 0.00 0.00 38.29 5.18
178 179 2.430244 CGCAGTACCGACAACGCT 60.430 61.111 0.00 0.00 38.29 5.07
179 180 2.305127 AACGCAGTACCGACAACGC 61.305 57.895 0.00 0.00 45.00 4.84
180 181 1.210545 ACAACGCAGTACCGACAACG 61.211 55.000 0.00 0.00 45.00 4.10
181 182 1.717645 CTACAACGCAGTACCGACAAC 59.282 52.381 0.00 0.00 45.00 3.32
182 183 1.931709 GCTACAACGCAGTACCGACAA 60.932 52.381 0.00 0.00 45.00 3.18
183 184 0.387622 GCTACAACGCAGTACCGACA 60.388 55.000 0.00 0.00 45.00 4.35
184 185 0.109412 AGCTACAACGCAGTACCGAC 60.109 55.000 0.00 0.00 45.00 4.79
185 186 0.599558 AAGCTACAACGCAGTACCGA 59.400 50.000 0.00 0.00 45.00 4.69
186 187 1.126113 CAAAGCTACAACGCAGTACCG 59.874 52.381 0.00 0.00 45.00 4.02
187 188 2.140717 ACAAAGCTACAACGCAGTACC 58.859 47.619 0.00 0.00 45.00 3.34
188 189 3.057734 AGACAAAGCTACAACGCAGTAC 58.942 45.455 0.00 0.00 45.00 2.73
189 190 3.243602 TGAGACAAAGCTACAACGCAGTA 60.244 43.478 0.00 0.00 45.00 2.74
191 192 2.096713 GTGAGACAAAGCTACAACGCAG 60.097 50.000 0.00 0.00 0.00 5.18
192 193 1.864711 GTGAGACAAAGCTACAACGCA 59.135 47.619 0.00 0.00 0.00 5.24
193 194 1.194772 GGTGAGACAAAGCTACAACGC 59.805 52.381 0.00 0.00 0.00 4.84
194 195 1.798813 GGGTGAGACAAAGCTACAACG 59.201 52.381 0.00 0.00 0.00 4.10
195 196 2.152016 GGGGTGAGACAAAGCTACAAC 58.848 52.381 0.00 0.00 0.00 3.32
196 197 2.054799 AGGGGTGAGACAAAGCTACAA 58.945 47.619 0.00 0.00 0.00 2.41
197 198 1.347707 CAGGGGTGAGACAAAGCTACA 59.652 52.381 0.00 0.00 0.00 2.74
198 199 1.339151 CCAGGGGTGAGACAAAGCTAC 60.339 57.143 0.00 0.00 0.00 3.58
199 200 0.984230 CCAGGGGTGAGACAAAGCTA 59.016 55.000 0.00 0.00 0.00 3.32
200 201 1.763770 CCAGGGGTGAGACAAAGCT 59.236 57.895 0.00 0.00 0.00 3.74
201 202 1.303643 CCCAGGGGTGAGACAAAGC 60.304 63.158 0.00 0.00 0.00 3.51
202 203 0.995024 ATCCCAGGGGTGAGACAAAG 59.005 55.000 5.33 0.00 36.47 2.77
203 204 1.075374 CAATCCCAGGGGTGAGACAAA 59.925 52.381 5.33 0.00 36.47 2.83
204 205 0.698238 CAATCCCAGGGGTGAGACAA 59.302 55.000 5.33 0.00 36.47 3.18
205 206 1.852157 GCAATCCCAGGGGTGAGACA 61.852 60.000 5.33 0.00 36.47 3.41
206 207 1.077429 GCAATCCCAGGGGTGAGAC 60.077 63.158 5.33 0.00 36.47 3.36
207 208 1.541118 TGCAATCCCAGGGGTGAGA 60.541 57.895 5.33 0.00 36.47 3.27
208 209 1.077212 CTGCAATCCCAGGGGTGAG 60.077 63.158 5.33 0.00 36.47 3.51
209 210 1.852157 ACTGCAATCCCAGGGGTGA 60.852 57.895 5.33 0.00 37.16 4.02
210 211 1.679977 CACTGCAATCCCAGGGGTG 60.680 63.158 5.33 5.64 37.16 4.61
211 212 2.765969 CACTGCAATCCCAGGGGT 59.234 61.111 5.33 0.00 37.16 4.95
213 214 1.077212 CTCCACTGCAATCCCAGGG 60.077 63.158 0.00 0.00 37.16 4.45
214 215 1.751927 GCTCCACTGCAATCCCAGG 60.752 63.158 0.00 0.00 37.16 4.45
215 216 1.302285 AGCTCCACTGCAATCCCAG 59.698 57.895 0.00 0.00 38.78 4.45
216 217 3.499406 AGCTCCACTGCAATCCCA 58.501 55.556 0.00 0.00 34.99 4.37
569 570 2.125552 TGAACGGATCTGGCGCAG 60.126 61.111 10.83 4.99 0.00 5.18
570 571 2.434185 GTGAACGGATCTGGCGCA 60.434 61.111 10.83 0.00 0.00 6.09
571 572 3.195698 GGTGAACGGATCTGGCGC 61.196 66.667 6.47 0.00 0.00 6.53
572 573 1.375396 TTGGTGAACGGATCTGGCG 60.375 57.895 6.47 0.00 0.00 5.69
573 574 2.171635 GTTGGTGAACGGATCTGGC 58.828 57.895 6.47 0.00 0.00 4.85
582 583 1.635663 CGATCTGGGCGTTGGTGAAC 61.636 60.000 0.00 0.00 0.00 3.18
583 584 1.375396 CGATCTGGGCGTTGGTGAA 60.375 57.895 0.00 0.00 0.00 3.18
584 585 2.264480 CGATCTGGGCGTTGGTGA 59.736 61.111 0.00 0.00 0.00 4.02
585 586 2.819595 CCGATCTGGGCGTTGGTG 60.820 66.667 0.00 0.00 0.00 4.17
586 587 3.000819 TCCGATCTGGGCGTTGGT 61.001 61.111 4.16 0.00 38.76 3.67
587 588 2.511600 GTCCGATCTGGGCGTTGG 60.512 66.667 4.16 0.00 38.76 3.77
608 609 5.432885 AATTTAAATCATCCGCCTAACCG 57.567 39.130 0.10 0.00 0.00 4.44
609 610 5.237779 TCGAATTTAAATCATCCGCCTAACC 59.762 40.000 0.10 0.00 0.00 2.85
610 611 6.295039 TCGAATTTAAATCATCCGCCTAAC 57.705 37.500 0.10 0.00 0.00 2.34
611 612 6.148811 GGATCGAATTTAAATCATCCGCCTAA 59.851 38.462 13.86 0.00 0.00 2.69
612 613 5.642063 GGATCGAATTTAAATCATCCGCCTA 59.358 40.000 13.86 0.00 0.00 3.93
613 614 4.455877 GGATCGAATTTAAATCATCCGCCT 59.544 41.667 13.86 3.99 0.00 5.52
614 615 4.669197 CGGATCGAATTTAAATCATCCGCC 60.669 45.833 26.84 14.63 44.46 6.13
615 616 4.394795 CGGATCGAATTTAAATCATCCGC 58.605 43.478 26.84 9.36 44.46 5.54
617 618 6.371548 TCATCCGGATCGAATTTAAATCATCC 59.628 38.462 15.88 16.82 0.00 3.51
618 619 7.364522 TCATCCGGATCGAATTTAAATCATC 57.635 36.000 15.88 4.09 0.00 2.92
619 620 7.228507 TGTTCATCCGGATCGAATTTAAATCAT 59.771 33.333 23.29 0.00 0.00 2.45
620 621 6.540551 TGTTCATCCGGATCGAATTTAAATCA 59.459 34.615 23.29 15.48 0.00 2.57
621 622 6.851330 GTGTTCATCCGGATCGAATTTAAATC 59.149 38.462 23.29 13.84 0.00 2.17
622 623 6.542370 AGTGTTCATCCGGATCGAATTTAAAT 59.458 34.615 23.29 12.01 0.00 1.40
623 624 5.878116 AGTGTTCATCCGGATCGAATTTAAA 59.122 36.000 23.29 10.88 0.00 1.52
624 625 5.424757 AGTGTTCATCCGGATCGAATTTAA 58.575 37.500 23.29 12.53 0.00 1.52
625 626 5.018539 AGTGTTCATCCGGATCGAATTTA 57.981 39.130 23.29 14.57 0.00 1.40
626 627 3.873910 AGTGTTCATCCGGATCGAATTT 58.126 40.909 23.29 13.87 0.00 1.82
627 628 3.543680 AGTGTTCATCCGGATCGAATT 57.456 42.857 23.29 14.10 0.00 2.17
628 629 4.665833 TTAGTGTTCATCCGGATCGAAT 57.334 40.909 23.29 14.73 0.00 3.34
629 630 4.665833 ATTAGTGTTCATCCGGATCGAA 57.334 40.909 15.88 18.04 0.00 3.71
630 631 4.665833 AATTAGTGTTCATCCGGATCGA 57.334 40.909 15.88 12.98 0.00 3.59
631 632 6.868864 AGATTAATTAGTGTTCATCCGGATCG 59.131 38.462 15.88 10.69 0.00 3.69
632 633 9.877178 ATAGATTAATTAGTGTTCATCCGGATC 57.123 33.333 15.88 4.05 0.00 3.36
643 644 8.965172 CGCGTCACTTTATAGATTAATTAGTGT 58.035 33.333 0.00 0.00 34.62 3.55
644 645 9.177304 TCGCGTCACTTTATAGATTAATTAGTG 57.823 33.333 5.77 0.00 34.38 2.74
645 646 9.395707 CTCGCGTCACTTTATAGATTAATTAGT 57.604 33.333 5.77 0.00 0.00 2.24
646 647 9.395707 ACTCGCGTCACTTTATAGATTAATTAG 57.604 33.333 5.77 0.00 0.00 1.73
647 648 9.740239 AACTCGCGTCACTTTATAGATTAATTA 57.260 29.630 5.77 0.00 0.00 1.40
648 649 8.644318 AACTCGCGTCACTTTATAGATTAATT 57.356 30.769 5.77 0.00 0.00 1.40
649 650 8.644318 AAACTCGCGTCACTTTATAGATTAAT 57.356 30.769 5.77 0.00 0.00 1.40
650 651 8.377681 CAAAACTCGCGTCACTTTATAGATTAA 58.622 33.333 5.77 0.00 0.00 1.40
651 652 7.009815 CCAAAACTCGCGTCACTTTATAGATTA 59.990 37.037 5.77 0.00 0.00 1.75
652 653 6.183360 CCAAAACTCGCGTCACTTTATAGATT 60.183 38.462 5.77 0.00 0.00 2.40
653 654 5.291128 CCAAAACTCGCGTCACTTTATAGAT 59.709 40.000 5.77 0.00 0.00 1.98
654 655 4.624024 CCAAAACTCGCGTCACTTTATAGA 59.376 41.667 5.77 0.00 0.00 1.98
655 656 4.724036 GCCAAAACTCGCGTCACTTTATAG 60.724 45.833 5.77 0.00 0.00 1.31
656 657 3.123959 GCCAAAACTCGCGTCACTTTATA 59.876 43.478 5.77 0.00 0.00 0.98
657 658 2.095919 GCCAAAACTCGCGTCACTTTAT 60.096 45.455 5.77 0.00 0.00 1.40
658 659 1.262151 GCCAAAACTCGCGTCACTTTA 59.738 47.619 5.77 0.00 0.00 1.85
659 660 0.028902 GCCAAAACTCGCGTCACTTT 59.971 50.000 5.77 0.00 0.00 2.66
660 661 1.092921 TGCCAAAACTCGCGTCACTT 61.093 50.000 5.77 0.00 0.00 3.16
661 662 1.092921 TTGCCAAAACTCGCGTCACT 61.093 50.000 5.77 0.00 0.00 3.41
662 663 0.248296 TTTGCCAAAACTCGCGTCAC 60.248 50.000 5.77 0.00 0.00 3.67
663 664 0.028770 CTTTGCCAAAACTCGCGTCA 59.971 50.000 5.77 0.00 0.00 4.35
664 665 0.306533 TCTTTGCCAAAACTCGCGTC 59.693 50.000 5.77 0.00 0.00 5.19
665 666 0.736053 TTCTTTGCCAAAACTCGCGT 59.264 45.000 5.77 0.00 0.00 6.01
666 667 1.833860 TTTCTTTGCCAAAACTCGCG 58.166 45.000 0.00 0.00 0.00 5.87
716 717 4.246458 TGCAACGCAAAAGGTTAGTTTTT 58.754 34.783 0.00 0.00 34.76 1.94
717 718 3.851098 TGCAACGCAAAAGGTTAGTTTT 58.149 36.364 0.00 0.00 34.76 2.43
718 719 3.512033 TGCAACGCAAAAGGTTAGTTT 57.488 38.095 0.00 0.00 34.76 2.66
719 720 3.512033 TTGCAACGCAAAAGGTTAGTT 57.488 38.095 0.00 0.00 45.96 2.24
729 730 3.766676 TGTAAGTTTCTTGCAACGCAA 57.233 38.095 0.00 0.92 46.80 4.85
730 731 3.766676 TTGTAAGTTTCTTGCAACGCA 57.233 38.095 0.00 0.00 36.47 5.24
731 732 5.443142 TTTTTGTAAGTTTCTTGCAACGC 57.557 34.783 11.26 0.00 0.00 4.84
732 733 9.566624 CATTATTTTTGTAAGTTTCTTGCAACG 57.433 29.630 11.26 0.00 0.00 4.10
733 734 9.368921 GCATTATTTTTGTAAGTTTCTTGCAAC 57.631 29.630 11.26 0.00 0.00 4.17
734 735 8.272176 CGCATTATTTTTGTAAGTTTCTTGCAA 58.728 29.630 0.00 0.00 0.00 4.08
735 736 7.568497 GCGCATTATTTTTGTAAGTTTCTTGCA 60.568 33.333 0.30 0.00 0.00 4.08
736 737 6.731948 GCGCATTATTTTTGTAAGTTTCTTGC 59.268 34.615 0.30 0.00 0.00 4.01
737 738 7.782242 TGCGCATTATTTTTGTAAGTTTCTTG 58.218 30.769 5.66 0.00 0.00 3.02
738 739 7.938563 TGCGCATTATTTTTGTAAGTTTCTT 57.061 28.000 5.66 0.00 0.00 2.52
739 740 7.008266 CGATGCGCATTATTTTTGTAAGTTTCT 59.992 33.333 26.12 0.00 0.00 2.52
740 741 7.104264 CGATGCGCATTATTTTTGTAAGTTTC 58.896 34.615 26.12 4.92 0.00 2.78
741 742 6.034470 CCGATGCGCATTATTTTTGTAAGTTT 59.966 34.615 26.12 0.00 0.00 2.66
742 743 5.514914 CCGATGCGCATTATTTTTGTAAGTT 59.485 36.000 26.12 0.00 0.00 2.66
743 744 5.034152 CCGATGCGCATTATTTTTGTAAGT 58.966 37.500 26.12 0.00 0.00 2.24
744 745 5.270083 TCCGATGCGCATTATTTTTGTAAG 58.730 37.500 26.12 4.49 0.00 2.34
745 746 5.236655 TCCGATGCGCATTATTTTTGTAA 57.763 34.783 26.12 0.00 0.00 2.41
746 747 4.884458 TCCGATGCGCATTATTTTTGTA 57.116 36.364 26.12 0.15 0.00 2.41
747 748 3.773860 TCCGATGCGCATTATTTTTGT 57.226 38.095 26.12 0.00 0.00 2.83
748 749 5.640218 ATTTCCGATGCGCATTATTTTTG 57.360 34.783 26.12 5.43 0.00 2.44
749 750 6.417635 CACTATTTCCGATGCGCATTATTTTT 59.582 34.615 26.12 11.24 0.00 1.94
750 751 5.914635 CACTATTTCCGATGCGCATTATTTT 59.085 36.000 26.12 10.73 0.00 1.82
751 752 5.451908 CACTATTTCCGATGCGCATTATTT 58.548 37.500 26.12 0.98 0.00 1.40
752 753 4.083324 CCACTATTTCCGATGCGCATTATT 60.083 41.667 26.12 1.47 0.00 1.40
753 754 3.436704 CCACTATTTCCGATGCGCATTAT 59.563 43.478 26.12 14.63 0.00 1.28
754 755 2.805671 CCACTATTTCCGATGCGCATTA 59.194 45.455 26.12 10.66 0.00 1.90
755 756 1.603802 CCACTATTTCCGATGCGCATT 59.396 47.619 26.12 9.98 0.00 3.56
756 757 1.229428 CCACTATTTCCGATGCGCAT 58.771 50.000 25.66 25.66 0.00 4.73
757 758 0.107897 ACCACTATTTCCGATGCGCA 60.108 50.000 14.96 14.96 0.00 6.09
758 759 1.525619 GTACCACTATTTCCGATGCGC 59.474 52.381 0.00 0.00 0.00 6.09
759 760 2.132762 GGTACCACTATTTCCGATGCG 58.867 52.381 7.15 0.00 0.00 4.73
760 761 2.132762 CGGTACCACTATTTCCGATGC 58.867 52.381 13.54 0.00 43.22 3.91
761 762 3.120792 CACGGTACCACTATTTCCGATG 58.879 50.000 13.54 0.00 43.22 3.84
762 763 2.482490 GCACGGTACCACTATTTCCGAT 60.482 50.000 13.54 0.00 43.22 4.18
763 764 1.135024 GCACGGTACCACTATTTCCGA 60.135 52.381 13.54 0.00 43.22 4.55
764 765 1.283736 GCACGGTACCACTATTTCCG 58.716 55.000 13.54 0.00 45.53 4.30
765 766 2.277084 CTGCACGGTACCACTATTTCC 58.723 52.381 13.54 0.00 0.00 3.13
766 767 2.277084 CCTGCACGGTACCACTATTTC 58.723 52.381 13.54 0.00 0.00 2.17
767 768 1.065709 CCCTGCACGGTACCACTATTT 60.066 52.381 13.54 0.00 0.00 1.40
768 769 0.539986 CCCTGCACGGTACCACTATT 59.460 55.000 13.54 0.00 0.00 1.73
769 770 1.968050 GCCCTGCACGGTACCACTAT 61.968 60.000 13.54 0.00 0.00 2.12
770 771 2.652095 GCCCTGCACGGTACCACTA 61.652 63.158 13.54 0.00 0.00 2.74
771 772 4.016706 GCCCTGCACGGTACCACT 62.017 66.667 13.54 0.00 0.00 4.00
850 852 0.881118 GTGAACGGGTGCATCACAAT 59.119 50.000 11.58 0.00 42.31 2.71
889 892 0.389391 CACTGTCCACTCCGTGACTT 59.611 55.000 0.00 0.00 35.23 3.01
907 910 1.191489 TGGCTTGTCGGATCACTCCA 61.191 55.000 0.00 0.00 42.19 3.86
908 911 0.036388 TTGGCTTGTCGGATCACTCC 60.036 55.000 0.00 0.00 38.29 3.85
929 932 0.872021 GCGAGACTTATCTGCGGGTG 60.872 60.000 0.00 0.00 34.34 4.61
930 933 1.437986 GCGAGACTTATCTGCGGGT 59.562 57.895 0.00 0.00 34.34 5.28
985 988 0.033504 GGTGTGTGATCGAGGTGTGT 59.966 55.000 0.00 0.00 0.00 3.72
986 989 0.670546 GGGTGTGTGATCGAGGTGTG 60.671 60.000 0.00 0.00 0.00 3.82
987 990 1.671742 GGGTGTGTGATCGAGGTGT 59.328 57.895 0.00 0.00 0.00 4.16
988 991 1.079127 GGGGTGTGTGATCGAGGTG 60.079 63.158 0.00 0.00 0.00 4.00
989 992 2.646175 CGGGGTGTGTGATCGAGGT 61.646 63.158 0.00 0.00 0.00 3.85
990 993 2.184322 CGGGGTGTGTGATCGAGG 59.816 66.667 0.00 0.00 0.00 4.63
991 994 1.153823 GTCGGGGTGTGTGATCGAG 60.154 63.158 0.00 0.00 0.00 4.04
992 995 1.465200 TTGTCGGGGTGTGTGATCGA 61.465 55.000 0.00 0.00 0.00 3.59
993 996 1.005512 TTGTCGGGGTGTGTGATCG 60.006 57.895 0.00 0.00 0.00 3.69
994 997 1.298859 GCTTGTCGGGGTGTGTGATC 61.299 60.000 0.00 0.00 0.00 2.92
995 998 1.302511 GCTTGTCGGGGTGTGTGAT 60.303 57.895 0.00 0.00 0.00 3.06
996 999 1.116536 TAGCTTGTCGGGGTGTGTGA 61.117 55.000 0.00 0.00 0.00 3.58
997 1000 0.949105 GTAGCTTGTCGGGGTGTGTG 60.949 60.000 0.00 0.00 0.00 3.82
998 1001 1.370064 GTAGCTTGTCGGGGTGTGT 59.630 57.895 0.00 0.00 0.00 3.72
999 1002 0.250124 TTGTAGCTTGTCGGGGTGTG 60.250 55.000 0.00 0.00 0.00 3.82
1004 1029 1.080093 TCGCTTGTAGCTTGTCGGG 60.080 57.895 0.00 0.00 39.60 5.14
1067 1092 2.796193 CGGGCTCCATGATCGGTGA 61.796 63.158 0.00 0.00 0.00 4.02
1360 1385 2.610859 TGGAACAGGCTCCCCTCC 60.611 66.667 0.00 0.00 40.33 4.30
1469 1494 4.681978 GCTGCCAAGGTCCGTCGT 62.682 66.667 0.00 0.00 0.00 4.34
1608 1633 3.125573 CGACCTCCGTCTCGAGCA 61.126 66.667 7.81 0.00 36.82 4.26
1850 1875 3.055719 AATCCAACGGCAGCCACG 61.056 61.111 13.30 0.01 37.36 4.94
1960 1990 1.847798 AATGGTGCAGCTCCGGGTTA 61.848 55.000 18.08 0.00 0.00 2.85
1978 2008 1.002773 GGCGAGAAGAAGGGGTTGTAA 59.997 52.381 0.00 0.00 0.00 2.41
2185 2215 3.083997 AGGATGGTCACTCCGGGC 61.084 66.667 0.00 0.00 37.88 6.13
2191 2221 4.148825 GCGCGGAGGATGGTCACT 62.149 66.667 8.83 0.00 0.00 3.41
2308 2338 2.010497 GCTTTCGGGGTCTCAAAGATC 58.990 52.381 0.00 0.00 29.96 2.75
2314 2344 2.654877 GTCGCTTTCGGGGTCTCA 59.345 61.111 0.00 0.00 36.13 3.27
2542 2572 1.734137 CTCGGTGACCCTCCGTATG 59.266 63.158 0.00 0.00 46.86 2.39
3025 3055 2.430921 CCTCACACGTCGCAGGAC 60.431 66.667 0.00 0.00 39.89 3.85
3026 3056 2.910479 ACCTCACACGTCGCAGGA 60.910 61.111 9.66 0.00 0.00 3.86
3043 3073 0.611618 AATCACCATCTTTGCGGGCA 60.612 50.000 0.00 0.00 0.00 5.36
3046 3076 2.223641 CCATCAATCACCATCTTTGCGG 60.224 50.000 0.00 0.00 0.00 5.69
3047 3077 2.797087 GCCATCAATCACCATCTTTGCG 60.797 50.000 0.00 0.00 0.00 4.85
3105 3140 5.869579 AGGATCATTCGCACCATTACTATT 58.130 37.500 0.00 0.00 0.00 1.73
3208 3246 7.115520 CACTGACACTACTTTATCTGACAACAG 59.884 40.741 0.00 0.00 44.66 3.16
3218 3256 5.012148 AGCCTTGTCACTGACACTACTTTAT 59.988 40.000 11.58 0.00 42.60 1.40
3229 3267 1.367471 CGTCCAGCCTTGTCACTGA 59.633 57.895 0.00 0.00 35.90 3.41
3232 3270 0.032952 TACACGTCCAGCCTTGTCAC 59.967 55.000 0.00 0.00 0.00 3.67
3236 3274 3.856508 CGTACACGTCCAGCCTTG 58.143 61.111 0.00 0.00 34.11 3.61
3247 3285 3.057033 TCTTTAGGCAGAAGGACGTACAC 60.057 47.826 0.00 0.00 0.00 2.90
3248 3286 3.057033 GTCTTTAGGCAGAAGGACGTACA 60.057 47.826 0.00 0.00 0.00 2.90
3252 3290 2.231478 TCTGTCTTTAGGCAGAAGGACG 59.769 50.000 11.41 5.50 38.04 4.79
3255 3293 2.611518 CGTCTGTCTTTAGGCAGAAGG 58.388 52.381 15.08 7.32 42.51 3.46
3265 3303 3.655276 ACGTATTGTCCGTCTGTCTTT 57.345 42.857 0.00 0.00 31.97 2.52
3284 3322 1.940613 GTGGTTGAATCAGCCGGATAC 59.059 52.381 5.05 0.43 37.56 2.24
3285 3323 1.557371 TGTGGTTGAATCAGCCGGATA 59.443 47.619 5.05 0.00 37.56 2.59
3286 3324 0.327924 TGTGGTTGAATCAGCCGGAT 59.672 50.000 5.05 0.00 37.56 4.18
3287 3325 0.109532 TTGTGGTTGAATCAGCCGGA 59.890 50.000 5.05 0.00 37.56 5.14
3288 3326 0.958091 TTTGTGGTTGAATCAGCCGG 59.042 50.000 11.45 0.00 37.56 6.13
3289 3327 1.666888 GCTTTGTGGTTGAATCAGCCG 60.667 52.381 11.45 0.00 37.56 5.52
3290 3328 1.340889 TGCTTTGTGGTTGAATCAGCC 59.659 47.619 9.31 9.31 35.26 4.85
3291 3329 2.035066 ACTGCTTTGTGGTTGAATCAGC 59.965 45.455 0.00 0.00 0.00 4.26
3292 3330 3.607775 CGACTGCTTTGTGGTTGAATCAG 60.608 47.826 0.00 0.00 0.00 2.90
3293 3331 2.290367 CGACTGCTTTGTGGTTGAATCA 59.710 45.455 0.00 0.00 0.00 2.57
3294 3332 2.290641 ACGACTGCTTTGTGGTTGAATC 59.709 45.455 0.00 0.00 0.00 2.52
3295 3333 2.290641 GACGACTGCTTTGTGGTTGAAT 59.709 45.455 0.00 0.00 0.00 2.57
3296 3334 1.668751 GACGACTGCTTTGTGGTTGAA 59.331 47.619 0.00 0.00 0.00 2.69
3297 3335 1.295792 GACGACTGCTTTGTGGTTGA 58.704 50.000 0.00 0.00 0.00 3.18
3298 3336 1.013596 TGACGACTGCTTTGTGGTTG 58.986 50.000 0.00 0.00 0.00 3.77
3299 3337 1.967319 ATGACGACTGCTTTGTGGTT 58.033 45.000 0.00 0.00 0.00 3.67
3300 3338 1.873591 GAATGACGACTGCTTTGTGGT 59.126 47.619 0.00 0.00 0.00 4.16
3301 3339 1.197721 GGAATGACGACTGCTTTGTGG 59.802 52.381 0.00 0.00 0.00 4.17
3302 3340 1.197721 GGGAATGACGACTGCTTTGTG 59.802 52.381 0.00 0.00 0.00 3.33
3303 3341 1.202758 TGGGAATGACGACTGCTTTGT 60.203 47.619 0.00 0.00 0.00 2.83
3304 3342 1.522668 TGGGAATGACGACTGCTTTG 58.477 50.000 0.00 0.00 0.00 2.77
3305 3343 2.359900 GATGGGAATGACGACTGCTTT 58.640 47.619 0.00 0.00 0.00 3.51
3306 3344 1.407437 GGATGGGAATGACGACTGCTT 60.407 52.381 0.00 0.00 0.00 3.91
3307 3345 0.179000 GGATGGGAATGACGACTGCT 59.821 55.000 0.00 0.00 0.00 4.24
3308 3346 0.815615 GGGATGGGAATGACGACTGC 60.816 60.000 0.00 0.00 0.00 4.40
3309 3347 0.833287 AGGGATGGGAATGACGACTG 59.167 55.000 0.00 0.00 0.00 3.51
3310 3348 1.123928 GAGGGATGGGAATGACGACT 58.876 55.000 0.00 0.00 0.00 4.18
3311 3349 0.106894 GGAGGGATGGGAATGACGAC 59.893 60.000 0.00 0.00 0.00 4.34
3312 3350 0.031111 AGGAGGGATGGGAATGACGA 60.031 55.000 0.00 0.00 0.00 4.20
3313 3351 0.394565 GAGGAGGGATGGGAATGACG 59.605 60.000 0.00 0.00 0.00 4.35
3314 3352 1.813102 AGAGGAGGGATGGGAATGAC 58.187 55.000 0.00 0.00 0.00 3.06
3315 3353 2.021639 AGAAGAGGAGGGATGGGAATGA 60.022 50.000 0.00 0.00 0.00 2.57
3316 3354 2.416638 AGAAGAGGAGGGATGGGAATG 58.583 52.381 0.00 0.00 0.00 2.67
3317 3355 2.782341 CAAGAAGAGGAGGGATGGGAAT 59.218 50.000 0.00 0.00 0.00 3.01
3318 3356 2.200081 CAAGAAGAGGAGGGATGGGAA 58.800 52.381 0.00 0.00 0.00 3.97
3319 3357 1.081174 ACAAGAAGAGGAGGGATGGGA 59.919 52.381 0.00 0.00 0.00 4.37
3320 3358 1.488393 GACAAGAAGAGGAGGGATGGG 59.512 57.143 0.00 0.00 0.00 4.00
3321 3359 1.488393 GGACAAGAAGAGGAGGGATGG 59.512 57.143 0.00 0.00 0.00 3.51
3322 3360 1.137872 CGGACAAGAAGAGGAGGGATG 59.862 57.143 0.00 0.00 0.00 3.51
3323 3361 1.007238 TCGGACAAGAAGAGGAGGGAT 59.993 52.381 0.00 0.00 0.00 3.85
3324 3362 0.408309 TCGGACAAGAAGAGGAGGGA 59.592 55.000 0.00 0.00 0.00 4.20
3325 3363 0.820871 CTCGGACAAGAAGAGGAGGG 59.179 60.000 0.00 0.00 0.00 4.30
3326 3364 1.474879 GTCTCGGACAAGAAGAGGAGG 59.525 57.143 0.00 0.00 33.16 4.30
3327 3365 2.163509 TGTCTCGGACAAGAAGAGGAG 58.836 52.381 4.51 0.00 39.78 3.69
3328 3366 2.287977 TGTCTCGGACAAGAAGAGGA 57.712 50.000 4.51 0.00 39.78 3.71
3337 3375 1.067846 CCGTCATCTTTGTCTCGGACA 60.068 52.381 3.02 3.02 41.09 4.02
3338 3376 1.201647 TCCGTCATCTTTGTCTCGGAC 59.798 52.381 0.00 0.00 41.45 4.79
3339 3377 1.541379 TCCGTCATCTTTGTCTCGGA 58.459 50.000 0.00 0.00 43.52 4.55
3340 3378 2.586258 ATCCGTCATCTTTGTCTCGG 57.414 50.000 0.00 0.00 39.40 4.63
3341 3379 6.403333 TTTTTATCCGTCATCTTTGTCTCG 57.597 37.500 0.00 0.00 0.00 4.04
3342 3380 6.675728 GCCTTTTTATCCGTCATCTTTGTCTC 60.676 42.308 0.00 0.00 0.00 3.36
3343 3381 5.123979 GCCTTTTTATCCGTCATCTTTGTCT 59.876 40.000 0.00 0.00 0.00 3.41
3344 3382 5.106317 TGCCTTTTTATCCGTCATCTTTGTC 60.106 40.000 0.00 0.00 0.00 3.18
3345 3383 4.764823 TGCCTTTTTATCCGTCATCTTTGT 59.235 37.500 0.00 0.00 0.00 2.83
3346 3384 5.309323 TGCCTTTTTATCCGTCATCTTTG 57.691 39.130 0.00 0.00 0.00 2.77
3347 3385 5.710099 TCTTGCCTTTTTATCCGTCATCTTT 59.290 36.000 0.00 0.00 0.00 2.52
3348 3386 5.253330 TCTTGCCTTTTTATCCGTCATCTT 58.747 37.500 0.00 0.00 0.00 2.40
3349 3387 4.843728 TCTTGCCTTTTTATCCGTCATCT 58.156 39.130 0.00 0.00 0.00 2.90
3350 3388 5.560966 TTCTTGCCTTTTTATCCGTCATC 57.439 39.130 0.00 0.00 0.00 2.92
3351 3389 5.476945 AGTTTCTTGCCTTTTTATCCGTCAT 59.523 36.000 0.00 0.00 0.00 3.06
3352 3390 4.825085 AGTTTCTTGCCTTTTTATCCGTCA 59.175 37.500 0.00 0.00 0.00 4.35
3353 3391 5.372547 AGTTTCTTGCCTTTTTATCCGTC 57.627 39.130 0.00 0.00 0.00 4.79
3354 3392 5.300792 TGAAGTTTCTTGCCTTTTTATCCGT 59.699 36.000 0.00 0.00 0.00 4.69
3355 3393 5.768317 TGAAGTTTCTTGCCTTTTTATCCG 58.232 37.500 0.00 0.00 0.00 4.18
3356 3394 7.116805 CACATGAAGTTTCTTGCCTTTTTATCC 59.883 37.037 0.00 0.00 36.22 2.59
3357 3395 7.116805 CCACATGAAGTTTCTTGCCTTTTTATC 59.883 37.037 0.00 0.00 36.22 1.75
3358 3396 6.930722 CCACATGAAGTTTCTTGCCTTTTTAT 59.069 34.615 0.00 0.00 36.22 1.40
3359 3397 6.127196 ACCACATGAAGTTTCTTGCCTTTTTA 60.127 34.615 0.00 0.00 36.22 1.52
3360 3398 5.118286 CCACATGAAGTTTCTTGCCTTTTT 58.882 37.500 0.00 0.00 36.22 1.94
3361 3399 4.162131 ACCACATGAAGTTTCTTGCCTTTT 59.838 37.500 0.00 0.00 36.22 2.27
3362 3400 3.706086 ACCACATGAAGTTTCTTGCCTTT 59.294 39.130 0.00 0.00 36.22 3.11
3363 3401 3.299503 ACCACATGAAGTTTCTTGCCTT 58.700 40.909 0.00 0.00 36.22 4.35
3364 3402 2.887152 GACCACATGAAGTTTCTTGCCT 59.113 45.455 0.00 0.00 36.22 4.75
3365 3403 2.622942 TGACCACATGAAGTTTCTTGCC 59.377 45.455 0.00 0.00 36.22 4.52
3366 3404 3.304928 CCTGACCACATGAAGTTTCTTGC 60.305 47.826 0.00 0.00 36.22 4.01
3367 3405 4.023707 GTCCTGACCACATGAAGTTTCTTG 60.024 45.833 0.00 6.29 38.07 3.02
3368 3406 4.137543 GTCCTGACCACATGAAGTTTCTT 58.862 43.478 0.00 0.00 0.00 2.52
3369 3407 3.136443 TGTCCTGACCACATGAAGTTTCT 59.864 43.478 0.00 0.00 0.00 2.52
3370 3408 3.476552 TGTCCTGACCACATGAAGTTTC 58.523 45.455 0.00 0.00 0.00 2.78
3371 3409 3.576078 TGTCCTGACCACATGAAGTTT 57.424 42.857 0.00 0.00 0.00 2.66
3372 3410 3.117888 AGTTGTCCTGACCACATGAAGTT 60.118 43.478 0.00 0.00 30.20 2.66
3373 3411 2.439507 AGTTGTCCTGACCACATGAAGT 59.560 45.455 0.00 0.00 30.20 3.01
3374 3412 3.131709 AGTTGTCCTGACCACATGAAG 57.868 47.619 0.00 0.00 30.20 3.02
3375 3413 3.118075 TGAAGTTGTCCTGACCACATGAA 60.118 43.478 0.00 0.00 30.20 2.57
3376 3414 2.437651 TGAAGTTGTCCTGACCACATGA 59.562 45.455 0.00 0.00 30.20 3.07
3377 3415 2.549754 GTGAAGTTGTCCTGACCACATG 59.450 50.000 4.57 0.00 30.20 3.21
3378 3416 2.487265 GGTGAAGTTGTCCTGACCACAT 60.487 50.000 4.57 0.00 30.20 3.21
3379 3417 1.134220 GGTGAAGTTGTCCTGACCACA 60.134 52.381 4.57 0.00 30.20 4.17
3380 3418 1.594331 GGTGAAGTTGTCCTGACCAC 58.406 55.000 0.00 0.00 0.00 4.16
3381 3419 0.105964 CGGTGAAGTTGTCCTGACCA 59.894 55.000 0.00 0.00 0.00 4.02
3389 3427 3.335534 GTCGCGCGGTGAAGTTGT 61.336 61.111 31.69 0.00 0.00 3.32
3395 3433 3.896133 GATAGGGTCGCGCGGTGA 61.896 66.667 31.69 8.02 0.00 4.02
3428 3468 5.595133 TCGTTTGTTCCTTTTATCCCAAACT 59.405 36.000 0.00 0.00 39.44 2.66
3444 3484 0.536460 ATTGGGCCGTCTCGTTTGTT 60.536 50.000 0.00 0.00 0.00 2.83
3540 3580 0.320421 CGTGGTGTCCGTTTCATCCT 60.320 55.000 0.00 0.00 0.00 3.24
3784 3827 3.964875 CGCGCAAACAAGGTGGCT 61.965 61.111 8.75 0.00 0.00 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.