Multiple sequence alignment - TraesCS2B01G174300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G174300 chr2B 100.000 2664 0 0 1 2664 148423043 148425706 0.000000e+00 4920.0
1 TraesCS2B01G174300 chr2B 100.000 249 0 0 2982 3230 148426024 148426272 8.160000e-126 460.0
2 TraesCS2B01G174300 chr2B 100.000 34 0 0 472 505 717883077 717883110 2.690000e-06 63.9
3 TraesCS2B01G174300 chr2D 93.568 1166 60 8 1380 2539 97281945 97283101 0.000000e+00 1724.0
4 TraesCS2B01G174300 chr2D 89.164 766 39 19 649 1377 97280935 97281693 0.000000e+00 915.0
5 TraesCS2B01G174300 chr2D 79.939 329 62 2 1535 1861 96775489 96775815 4.160000e-59 239.0
6 TraesCS2B01G174300 chr2D 85.714 84 9 2 2531 2612 22421355 22421437 5.740000e-13 86.1
7 TraesCS2B01G174300 chr2D 100.000 30 0 0 472 501 201945412 201945383 4.500000e-04 56.5
8 TraesCS2B01G174300 chr2A 91.151 1277 92 12 1393 2664 96092273 96093533 0.000000e+00 1712.0
9 TraesCS2B01G174300 chr2A 88.606 904 45 21 496 1351 96091072 96091965 0.000000e+00 1046.0
10 TraesCS2B01G174300 chr2A 80.000 330 60 4 1535 1861 95259857 95260183 4.160000e-59 239.0
11 TraesCS2B01G174300 chr2A 88.060 67 8 0 2544 2610 539973486 539973552 2.670000e-11 80.5
12 TraesCS2B01G174300 chr6D 81.008 853 137 15 1458 2302 448579827 448580662 0.000000e+00 654.0
13 TraesCS2B01G174300 chr6D 91.781 73 5 1 2541 2613 32649680 32649751 2.050000e-17 100.0
14 TraesCS2B01G174300 chrUn 80.243 329 61 2 1535 1861 17365209 17365535 8.950000e-61 244.0
15 TraesCS2B01G174300 chrUn 100.000 29 0 0 472 500 261756611 261756583 2.000000e-03 54.7
16 TraesCS2B01G174300 chrUn 100.000 29 0 0 472 500 271488192 271488164 2.000000e-03 54.7
17 TraesCS2B01G174300 chr1B 80.240 167 28 5 159 320 633267364 633267198 1.570000e-23 121.0
18 TraesCS2B01G174300 chr1B 88.406 69 7 1 2544 2612 268582908 268582975 7.430000e-12 82.4
19 TraesCS2B01G174300 chr1B 95.238 42 2 0 1283 1324 100308710 100308751 2.080000e-07 67.6
20 TraesCS2B01G174300 chr7D 83.206 131 12 9 194 321 627401616 627401493 9.470000e-21 111.0
21 TraesCS2B01G174300 chr7D 75.706 177 29 12 154 321 13711743 13711572 3.460000e-10 76.8
22 TraesCS2B01G174300 chr7D 100.000 31 0 0 470 500 70114602 70114632 1.250000e-04 58.4
23 TraesCS2B01G174300 chr7D 100.000 30 0 0 471 500 161929228 161929199 4.500000e-04 56.5
24 TraesCS2B01G174300 chr6A 90.541 74 6 1 2541 2614 37058736 37058808 2.650000e-16 97.1
25 TraesCS2B01G174300 chr3D 88.406 69 7 1 2544 2612 35694479 35694546 7.430000e-12 82.4
26 TraesCS2B01G174300 chr3A 86.842 76 6 2 2540 2612 450697427 450697353 7.430000e-12 82.4
27 TraesCS2B01G174300 chr3A 100.000 30 0 0 477 506 477432092 477432121 4.500000e-04 56.5
28 TraesCS2B01G174300 chr5A 86.486 74 7 1 2537 2607 71479864 71479937 9.610000e-11 78.7
29 TraesCS2B01G174300 chr1D 95.238 42 2 0 1283 1324 62858097 62858138 2.080000e-07 67.6
30 TraesCS2B01G174300 chr1A 97.436 39 1 0 1286 1324 60956064 60956026 2.080000e-07 67.6
31 TraesCS2B01G174300 chr4D 94.595 37 1 1 1287 1322 97508795 97508831 4.500000e-04 56.5
32 TraesCS2B01G174300 chr4D 94.595 37 1 1 1287 1322 97605433 97605469 4.500000e-04 56.5
33 TraesCS2B01G174300 chr4D 94.595 37 1 1 1287 1322 97720808 97720844 4.500000e-04 56.5
34 TraesCS2B01G174300 chr4D 94.595 37 1 1 1287 1322 97958101 97958137 4.500000e-04 56.5
35 TraesCS2B01G174300 chr4D 100.000 30 0 0 468 497 509837508 509837479 4.500000e-04 56.5
36 TraesCS2B01G174300 chr3B 100.000 30 0 0 477 506 462892058 462892087 4.500000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G174300 chr2B 148423043 148426272 3229 False 2690.0 4920 100.0000 1 3230 2 chr2B.!!$F2 3229
1 TraesCS2B01G174300 chr2D 97280935 97283101 2166 False 1319.5 1724 91.3660 649 2539 2 chr2D.!!$F3 1890
2 TraesCS2B01G174300 chr2A 96091072 96093533 2461 False 1379.0 1712 89.8785 496 2664 2 chr2A.!!$F3 2168
3 TraesCS2B01G174300 chr6D 448579827 448580662 835 False 654.0 654 81.0080 1458 2302 1 chr6D.!!$F2 844

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
733 740 0.032403 AAACGATCGGTGTTCGGTGA 59.968 50.0 20.98 0.00 40.83 4.02 F
1337 1386 0.034896 AGGGTAAGACTTGTGCACGG 59.965 55.0 13.13 10.15 0.00 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2170 2493 0.107508 CCATCGGCACTGGTCTTGAT 60.108 55.0 0.0 0.0 0.00 2.57 R
2998 3328 0.038166 ATGTGGCAACGTGGAGGATT 59.962 50.0 0.0 0.0 42.51 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 80 5.562506 TGTCACGTACATTTTTGTTGGAA 57.437 34.783 0.00 0.00 31.43 3.53
80 81 6.137794 TGTCACGTACATTTTTGTTGGAAT 57.862 33.333 0.00 0.00 31.43 3.01
81 82 5.974158 TGTCACGTACATTTTTGTTGGAATG 59.026 36.000 0.00 0.00 38.79 2.67
82 83 5.974751 GTCACGTACATTTTTGTTGGAATGT 59.025 36.000 6.89 6.89 45.54 2.71
83 84 5.974158 TCACGTACATTTTTGTTGGAATGTG 59.026 36.000 10.91 0.00 43.97 3.21
84 85 5.974158 CACGTACATTTTTGTTGGAATGTGA 59.026 36.000 10.91 0.00 43.97 3.58
85 86 5.974751 ACGTACATTTTTGTTGGAATGTGAC 59.025 36.000 10.91 5.76 43.97 3.67
86 87 5.974158 CGTACATTTTTGTTGGAATGTGACA 59.026 36.000 10.91 0.00 43.97 3.58
87 88 6.640499 CGTACATTTTTGTTGGAATGTGACAT 59.360 34.615 10.91 0.00 43.97 3.06
88 89 7.168972 CGTACATTTTTGTTGGAATGTGACATT 59.831 33.333 11.10 11.10 43.97 2.71
89 90 7.862512 ACATTTTTGTTGGAATGTGACATTT 57.137 28.000 12.62 0.00 42.96 2.32
90 91 8.278729 ACATTTTTGTTGGAATGTGACATTTT 57.721 26.923 12.62 0.00 42.96 1.82
91 92 8.738106 ACATTTTTGTTGGAATGTGACATTTTT 58.262 25.926 12.62 0.00 42.96 1.94
131 132 9.932207 TTTTTCATAAACATGATCTGATTGCTT 57.068 25.926 0.00 0.00 0.00 3.91
132 133 9.932207 TTTTCATAAACATGATCTGATTGCTTT 57.068 25.926 0.00 0.00 0.00 3.51
135 136 8.843262 TCATAAACATGATCTGATTGCTTTAGG 58.157 33.333 0.00 0.00 0.00 2.69
136 137 8.627403 CATAAACATGATCTGATTGCTTTAGGT 58.373 33.333 0.00 0.00 0.00 3.08
137 138 7.472334 AAACATGATCTGATTGCTTTAGGTT 57.528 32.000 0.00 0.00 0.00 3.50
138 139 7.472334 AACATGATCTGATTGCTTTAGGTTT 57.528 32.000 0.00 0.00 0.00 3.27
139 140 7.472334 ACATGATCTGATTGCTTTAGGTTTT 57.528 32.000 0.00 0.00 0.00 2.43
140 141 7.899973 ACATGATCTGATTGCTTTAGGTTTTT 58.100 30.769 0.00 0.00 0.00 1.94
158 159 0.958091 TTTTTCTCACCCACGCATGG 59.042 50.000 0.00 0.00 46.81 3.66
159 160 1.523154 TTTTCTCACCCACGCATGGC 61.523 55.000 0.00 0.00 45.76 4.40
160 161 2.410322 TTTCTCACCCACGCATGGCT 62.410 55.000 0.00 0.00 45.76 4.75
161 162 2.360350 CTCACCCACGCATGGCTT 60.360 61.111 0.00 0.00 45.76 4.35
162 163 1.973281 CTCACCCACGCATGGCTTT 60.973 57.895 0.00 0.00 45.76 3.51
163 164 2.203972 CTCACCCACGCATGGCTTTG 62.204 60.000 0.00 0.00 45.76 2.77
164 165 2.990967 ACCCACGCATGGCTTTGG 60.991 61.111 0.00 0.00 45.76 3.28
165 166 2.990967 CCCACGCATGGCTTTGGT 60.991 61.111 0.00 0.00 45.76 3.67
166 167 2.573083 CCCACGCATGGCTTTGGTT 61.573 57.895 0.00 0.00 45.76 3.67
167 168 1.367102 CCACGCATGGCTTTGGTTT 59.633 52.632 0.00 0.00 39.82 3.27
168 169 0.600557 CCACGCATGGCTTTGGTTTA 59.399 50.000 0.00 0.00 39.82 2.01
169 170 1.204467 CCACGCATGGCTTTGGTTTAT 59.796 47.619 0.00 0.00 39.82 1.40
170 171 2.425312 CCACGCATGGCTTTGGTTTATA 59.575 45.455 0.00 0.00 39.82 0.98
171 172 3.068024 CCACGCATGGCTTTGGTTTATAT 59.932 43.478 0.00 0.00 39.82 0.86
172 173 4.043750 CACGCATGGCTTTGGTTTATATG 58.956 43.478 0.00 0.00 0.00 1.78
173 174 3.951037 ACGCATGGCTTTGGTTTATATGA 59.049 39.130 0.00 0.00 0.00 2.15
174 175 4.400884 ACGCATGGCTTTGGTTTATATGAA 59.599 37.500 0.00 0.00 0.00 2.57
175 176 5.068987 ACGCATGGCTTTGGTTTATATGAAT 59.931 36.000 0.00 0.00 0.00 2.57
176 177 5.984926 CGCATGGCTTTGGTTTATATGAATT 59.015 36.000 0.00 0.00 0.00 2.17
177 178 6.479660 CGCATGGCTTTGGTTTATATGAATTT 59.520 34.615 0.00 0.00 0.00 1.82
178 179 7.517101 CGCATGGCTTTGGTTTATATGAATTTG 60.517 37.037 0.00 0.00 0.00 2.32
179 180 7.632721 CATGGCTTTGGTTTATATGAATTTGC 58.367 34.615 0.00 0.00 0.00 3.68
180 181 6.945218 TGGCTTTGGTTTATATGAATTTGCT 58.055 32.000 0.00 0.00 0.00 3.91
181 182 8.072321 TGGCTTTGGTTTATATGAATTTGCTA 57.928 30.769 0.00 0.00 0.00 3.49
182 183 8.703743 TGGCTTTGGTTTATATGAATTTGCTAT 58.296 29.630 0.00 0.00 0.00 2.97
183 184 9.546428 GGCTTTGGTTTATATGAATTTGCTATT 57.454 29.630 0.00 0.00 0.00 1.73
193 194 8.915057 ATATGAATTTGCTATTGCTAGAGTGT 57.085 30.769 0.00 0.00 40.48 3.55
194 195 7.636150 ATGAATTTGCTATTGCTAGAGTGTT 57.364 32.000 0.00 0.00 40.48 3.32
195 196 7.452880 TGAATTTGCTATTGCTAGAGTGTTT 57.547 32.000 0.00 0.00 40.48 2.83
196 197 7.885297 TGAATTTGCTATTGCTAGAGTGTTTT 58.115 30.769 0.00 0.00 40.48 2.43
197 198 8.359642 TGAATTTGCTATTGCTAGAGTGTTTTT 58.640 29.630 0.00 0.00 40.48 1.94
219 220 8.864069 TTTTTATGTTCATGTGTTGGTGTTAG 57.136 30.769 0.00 0.00 0.00 2.34
220 221 3.980646 TGTTCATGTGTTGGTGTTAGC 57.019 42.857 0.00 0.00 0.00 3.09
221 222 3.550820 TGTTCATGTGTTGGTGTTAGCT 58.449 40.909 0.00 0.00 0.00 3.32
222 223 4.709250 TGTTCATGTGTTGGTGTTAGCTA 58.291 39.130 0.00 0.00 0.00 3.32
223 224 5.312895 TGTTCATGTGTTGGTGTTAGCTAT 58.687 37.500 0.00 0.00 0.00 2.97
224 225 5.181056 TGTTCATGTGTTGGTGTTAGCTATG 59.819 40.000 0.00 0.00 0.00 2.23
225 226 4.905429 TCATGTGTTGGTGTTAGCTATGT 58.095 39.130 0.00 0.00 0.00 2.29
226 227 4.694982 TCATGTGTTGGTGTTAGCTATGTG 59.305 41.667 0.00 0.00 0.00 3.21
227 228 2.811431 TGTGTTGGTGTTAGCTATGTGC 59.189 45.455 0.00 0.00 43.29 4.57
228 229 2.811431 GTGTTGGTGTTAGCTATGTGCA 59.189 45.455 0.00 0.00 45.94 4.57
229 230 3.440173 GTGTTGGTGTTAGCTATGTGCAT 59.560 43.478 0.00 0.00 45.94 3.96
230 231 4.078537 TGTTGGTGTTAGCTATGTGCATT 58.921 39.130 0.00 0.00 45.94 3.56
231 232 4.155826 TGTTGGTGTTAGCTATGTGCATTC 59.844 41.667 0.00 0.00 45.94 2.67
232 233 4.220693 TGGTGTTAGCTATGTGCATTCT 57.779 40.909 0.00 0.00 45.94 2.40
233 234 5.351948 TGGTGTTAGCTATGTGCATTCTA 57.648 39.130 0.00 0.00 45.94 2.10
234 235 5.739959 TGGTGTTAGCTATGTGCATTCTAA 58.260 37.500 0.00 0.00 45.94 2.10
235 236 6.356556 TGGTGTTAGCTATGTGCATTCTAAT 58.643 36.000 0.00 0.00 45.94 1.73
236 237 6.828273 TGGTGTTAGCTATGTGCATTCTAATT 59.172 34.615 0.00 0.00 45.94 1.40
237 238 7.990314 TGGTGTTAGCTATGTGCATTCTAATTA 59.010 33.333 0.00 0.00 45.94 1.40
238 239 9.003658 GGTGTTAGCTATGTGCATTCTAATTAT 57.996 33.333 0.00 0.00 45.94 1.28
239 240 9.817365 GTGTTAGCTATGTGCATTCTAATTATG 57.183 33.333 0.00 0.00 45.94 1.90
240 241 8.506437 TGTTAGCTATGTGCATTCTAATTATGC 58.494 33.333 4.95 4.95 46.63 3.14
247 248 4.431661 GCATTCTAATTATGCAGAGGCC 57.568 45.455 6.77 0.00 45.93 5.19
248 249 3.120060 GCATTCTAATTATGCAGAGGCCG 60.120 47.826 6.77 0.00 45.93 6.13
249 250 2.839486 TCTAATTATGCAGAGGCCGG 57.161 50.000 0.00 0.00 40.13 6.13
250 251 2.325484 TCTAATTATGCAGAGGCCGGA 58.675 47.619 5.05 0.00 40.13 5.14
251 252 2.037251 TCTAATTATGCAGAGGCCGGAC 59.963 50.000 5.05 0.00 40.13 4.79
252 253 0.546122 AATTATGCAGAGGCCGGACA 59.454 50.000 11.69 0.00 40.13 4.02
253 254 0.767375 ATTATGCAGAGGCCGGACAT 59.233 50.000 11.69 0.00 40.13 3.06
254 255 0.179048 TTATGCAGAGGCCGGACATG 60.179 55.000 11.69 9.57 40.13 3.21
255 256 2.665008 TATGCAGAGGCCGGACATGC 62.665 60.000 26.15 26.15 40.13 4.06
263 264 2.494445 CCGGACATGCGCTCAGTA 59.506 61.111 9.73 0.00 0.00 2.74
264 265 1.068083 CCGGACATGCGCTCAGTAT 59.932 57.895 9.73 0.00 0.00 2.12
265 266 0.313987 CCGGACATGCGCTCAGTATA 59.686 55.000 9.73 0.00 0.00 1.47
266 267 1.067565 CCGGACATGCGCTCAGTATAT 60.068 52.381 9.73 0.00 0.00 0.86
267 268 2.610479 CCGGACATGCGCTCAGTATATT 60.610 50.000 9.73 0.00 0.00 1.28
268 269 3.059884 CGGACATGCGCTCAGTATATTT 58.940 45.455 9.73 0.00 0.00 1.40
269 270 4.234574 CGGACATGCGCTCAGTATATTTA 58.765 43.478 9.73 0.00 0.00 1.40
270 271 4.864806 CGGACATGCGCTCAGTATATTTAT 59.135 41.667 9.73 0.00 0.00 1.40
271 272 6.033966 CGGACATGCGCTCAGTATATTTATA 58.966 40.000 9.73 0.00 0.00 0.98
272 273 6.697455 CGGACATGCGCTCAGTATATTTATAT 59.303 38.462 9.73 0.00 0.00 0.86
273 274 7.096436 CGGACATGCGCTCAGTATATTTATATC 60.096 40.741 9.73 0.00 0.00 1.63
274 275 7.169982 GGACATGCGCTCAGTATATTTATATCC 59.830 40.741 9.73 0.00 0.00 2.59
275 276 7.786030 ACATGCGCTCAGTATATTTATATCCT 58.214 34.615 9.73 0.00 0.00 3.24
276 277 8.260818 ACATGCGCTCAGTATATTTATATCCTT 58.739 33.333 9.73 0.00 0.00 3.36
277 278 9.102757 CATGCGCTCAGTATATTTATATCCTTT 57.897 33.333 9.73 0.00 0.00 3.11
278 279 9.672673 ATGCGCTCAGTATATTTATATCCTTTT 57.327 29.630 9.73 0.00 0.00 2.27
279 280 8.935844 TGCGCTCAGTATATTTATATCCTTTTG 58.064 33.333 9.73 0.00 0.00 2.44
280 281 9.151471 GCGCTCAGTATATTTATATCCTTTTGA 57.849 33.333 0.00 0.00 0.00 2.69
295 296 9.760077 ATATCCTTTTGATGCTTCATTTGATTC 57.240 29.630 2.75 0.00 34.76 2.52
296 297 6.995364 TCCTTTTGATGCTTCATTTGATTCA 58.005 32.000 2.75 0.00 0.00 2.57
297 298 7.443477 TCCTTTTGATGCTTCATTTGATTCAA 58.557 30.769 2.75 0.00 0.00 2.69
298 299 8.098286 TCCTTTTGATGCTTCATTTGATTCAAT 58.902 29.630 2.75 0.00 0.00 2.57
299 300 9.373603 CCTTTTGATGCTTCATTTGATTCAATA 57.626 29.630 2.75 0.00 0.00 1.90
308 309 9.977762 GCTTCATTTGATTCAATAAAATTCACC 57.022 29.630 0.00 0.00 0.00 4.02
315 316 9.973450 TTGATTCAATAAAATTCACCTTTTCGA 57.027 25.926 0.00 0.00 31.15 3.71
316 317 9.973450 TGATTCAATAAAATTCACCTTTTCGAA 57.027 25.926 0.00 0.00 31.15 3.71
339 340 5.825593 AAAATGGGAAGTGAGTCTGTAGA 57.174 39.130 0.00 0.00 0.00 2.59
340 341 6.380079 AAAATGGGAAGTGAGTCTGTAGAT 57.620 37.500 0.00 0.00 0.00 1.98
341 342 6.380079 AAATGGGAAGTGAGTCTGTAGATT 57.620 37.500 0.00 0.00 0.00 2.40
342 343 7.496346 AAATGGGAAGTGAGTCTGTAGATTA 57.504 36.000 0.00 0.00 0.00 1.75
343 344 7.496346 AATGGGAAGTGAGTCTGTAGATTAA 57.504 36.000 0.00 0.00 0.00 1.40
344 345 6.928348 TGGGAAGTGAGTCTGTAGATTAAA 57.072 37.500 0.00 0.00 0.00 1.52
345 346 7.496346 TGGGAAGTGAGTCTGTAGATTAAAT 57.504 36.000 0.00 0.00 0.00 1.40
346 347 7.918076 TGGGAAGTGAGTCTGTAGATTAAATT 58.082 34.615 0.00 0.00 0.00 1.82
347 348 7.824289 TGGGAAGTGAGTCTGTAGATTAAATTG 59.176 37.037 0.00 0.00 0.00 2.32
348 349 7.824779 GGGAAGTGAGTCTGTAGATTAAATTGT 59.175 37.037 0.00 0.00 0.00 2.71
349 350 9.871238 GGAAGTGAGTCTGTAGATTAAATTGTA 57.129 33.333 0.00 0.00 0.00 2.41
378 379 8.798859 ATTGTCTGTAATTCTAGCATCTTGTT 57.201 30.769 0.00 0.00 0.00 2.83
379 380 9.890629 ATTGTCTGTAATTCTAGCATCTTGTTA 57.109 29.630 0.00 0.00 0.00 2.41
380 381 8.703604 TGTCTGTAATTCTAGCATCTTGTTAC 57.296 34.615 0.00 0.00 0.00 2.50
381 382 8.311109 TGTCTGTAATTCTAGCATCTTGTTACA 58.689 33.333 0.00 0.00 0.00 2.41
382 383 9.319143 GTCTGTAATTCTAGCATCTTGTTACAT 57.681 33.333 0.00 0.00 32.27 2.29
383 384 9.317936 TCTGTAATTCTAGCATCTTGTTACATG 57.682 33.333 0.00 0.00 32.27 3.21
384 385 9.317936 CTGTAATTCTAGCATCTTGTTACATGA 57.682 33.333 0.00 3.46 32.27 3.07
385 386 9.665719 TGTAATTCTAGCATCTTGTTACATGAA 57.334 29.630 0.00 0.00 0.00 2.57
389 390 8.791327 TTCTAGCATCTTGTTACATGAATTCA 57.209 30.769 11.26 11.26 0.00 2.57
390 391 8.201554 TCTAGCATCTTGTTACATGAATTCAC 57.798 34.615 11.07 0.00 0.00 3.18
391 392 5.872635 AGCATCTTGTTACATGAATTCACG 58.127 37.500 11.07 4.84 0.00 4.35
392 393 5.643348 AGCATCTTGTTACATGAATTCACGA 59.357 36.000 11.07 0.00 0.00 4.35
393 394 6.149308 AGCATCTTGTTACATGAATTCACGAA 59.851 34.615 11.07 2.37 0.00 3.85
394 395 6.801377 GCATCTTGTTACATGAATTCACGAAA 59.199 34.615 11.07 2.24 0.00 3.46
395 396 7.201266 GCATCTTGTTACATGAATTCACGAAAC 60.201 37.037 11.07 14.44 0.00 2.78
396 397 7.252965 TCTTGTTACATGAATTCACGAAACA 57.747 32.000 19.55 19.55 0.00 2.83
397 398 7.870826 TCTTGTTACATGAATTCACGAAACAT 58.129 30.769 22.11 1.91 0.00 2.71
398 399 7.802720 TCTTGTTACATGAATTCACGAAACATG 59.197 33.333 22.11 22.38 40.91 3.21
399 400 7.195839 TGTTACATGAATTCACGAAACATGA 57.804 32.000 23.89 12.81 39.30 3.07
400 401 7.075121 TGTTACATGAATTCACGAAACATGAC 58.925 34.615 23.89 17.19 39.30 3.06
401 402 4.711721 ACATGAATTCACGAAACATGACG 58.288 39.130 23.89 4.93 39.30 4.35
402 403 3.804518 TGAATTCACGAAACATGACGG 57.195 42.857 3.38 0.00 0.00 4.79
403 404 3.135225 TGAATTCACGAAACATGACGGT 58.865 40.909 3.38 0.00 0.00 4.83
404 405 3.185594 TGAATTCACGAAACATGACGGTC 59.814 43.478 3.38 0.00 0.00 4.79
405 406 1.504359 TTCACGAAACATGACGGTCC 58.496 50.000 5.55 0.00 0.00 4.46
406 407 0.665068 TCACGAAACATGACGGTCCG 60.665 55.000 10.48 10.48 0.00 4.79
407 408 1.373748 ACGAAACATGACGGTCCGG 60.374 57.895 17.28 0.00 0.00 5.14
408 409 2.736682 CGAAACATGACGGTCCGGC 61.737 63.158 17.28 14.52 34.27 6.13
409 410 2.359478 AAACATGACGGTCCGGCC 60.359 61.111 16.33 6.83 31.60 6.13
410 411 2.798148 GAAACATGACGGTCCGGCCT 62.798 60.000 16.33 0.36 31.60 5.19
411 412 1.546589 AAACATGACGGTCCGGCCTA 61.547 55.000 16.33 0.00 31.60 3.93
412 413 1.335132 AACATGACGGTCCGGCCTAT 61.335 55.000 16.33 0.00 31.60 2.57
413 414 1.335132 ACATGACGGTCCGGCCTATT 61.335 55.000 16.33 0.00 31.60 1.73
414 415 0.677288 CATGACGGTCCGGCCTATTA 59.323 55.000 16.33 0.00 31.60 0.98
415 416 0.677842 ATGACGGTCCGGCCTATTAC 59.322 55.000 16.33 0.00 31.60 1.89
416 417 1.008079 GACGGTCCGGCCTATTACG 60.008 63.158 17.28 1.30 34.25 3.18
417 418 1.728490 GACGGTCCGGCCTATTACGT 61.728 60.000 17.28 5.01 35.64 3.57
418 419 0.465460 ACGGTCCGGCCTATTACGTA 60.465 55.000 17.28 0.00 34.25 3.57
419 420 0.239347 CGGTCCGGCCTATTACGTAG 59.761 60.000 2.34 0.00 34.25 3.51
429 430 3.512680 CCTATTACGTAGGCAGCATAGC 58.487 50.000 0.00 0.00 43.44 2.97
430 431 3.193691 CCTATTACGTAGGCAGCATAGCT 59.806 47.826 0.00 0.00 43.44 3.32
431 432 3.753294 ATTACGTAGGCAGCATAGCTT 57.247 42.857 0.00 0.00 36.40 3.74
432 433 2.509052 TACGTAGGCAGCATAGCTTG 57.491 50.000 0.00 0.00 36.40 4.01
433 434 0.537188 ACGTAGGCAGCATAGCTTGT 59.463 50.000 0.00 0.00 36.40 3.16
434 435 1.212616 CGTAGGCAGCATAGCTTGTC 58.787 55.000 0.00 0.00 36.40 3.18
435 436 1.471501 CGTAGGCAGCATAGCTTGTCA 60.472 52.381 0.00 0.00 36.40 3.58
436 437 2.804572 CGTAGGCAGCATAGCTTGTCAT 60.805 50.000 0.00 0.00 36.40 3.06
437 438 1.676746 AGGCAGCATAGCTTGTCATG 58.323 50.000 0.00 0.00 36.40 3.07
438 439 0.666913 GGCAGCATAGCTTGTCATGG 59.333 55.000 0.00 0.00 36.40 3.66
439 440 1.386533 GCAGCATAGCTTGTCATGGT 58.613 50.000 0.00 0.00 36.40 3.55
440 441 2.564771 GCAGCATAGCTTGTCATGGTA 58.435 47.619 0.00 0.65 36.40 3.25
441 442 2.945008 GCAGCATAGCTTGTCATGGTAA 59.055 45.455 0.00 0.00 36.40 2.85
442 443 3.567164 GCAGCATAGCTTGTCATGGTAAT 59.433 43.478 0.00 0.00 36.40 1.89
443 444 4.320057 GCAGCATAGCTTGTCATGGTAATC 60.320 45.833 0.00 0.00 36.40 1.75
444 445 5.061853 CAGCATAGCTTGTCATGGTAATCT 58.938 41.667 0.00 0.84 36.40 2.40
445 446 6.226052 CAGCATAGCTTGTCATGGTAATCTA 58.774 40.000 0.00 0.00 36.40 1.98
446 447 6.877855 CAGCATAGCTTGTCATGGTAATCTAT 59.122 38.462 0.00 0.00 36.40 1.98
447 448 7.064371 CAGCATAGCTTGTCATGGTAATCTATC 59.936 40.741 0.00 0.00 36.40 2.08
448 449 6.875726 GCATAGCTTGTCATGGTAATCTATCA 59.124 38.462 0.00 0.00 0.00 2.15
449 450 7.551974 GCATAGCTTGTCATGGTAATCTATCAT 59.448 37.037 0.00 0.00 0.00 2.45
450 451 9.445878 CATAGCTTGTCATGGTAATCTATCATT 57.554 33.333 0.00 0.00 0.00 2.57
452 453 8.839310 AGCTTGTCATGGTAATCTATCATTAC 57.161 34.615 0.00 0.00 34.63 1.89
453 454 7.600375 AGCTTGTCATGGTAATCTATCATTACG 59.400 37.037 0.00 0.00 35.83 3.18
454 455 7.385205 GCTTGTCATGGTAATCTATCATTACGT 59.615 37.037 0.00 0.00 35.83 3.57
455 456 9.908152 CTTGTCATGGTAATCTATCATTACGTA 57.092 33.333 0.00 0.00 35.83 3.57
488 489 9.398170 CTTTCATGCTTTTATATTATGGAACGG 57.602 33.333 0.00 0.00 0.00 4.44
489 490 8.684386 TTCATGCTTTTATATTATGGAACGGA 57.316 30.769 0.00 0.00 0.00 4.69
490 491 8.322906 TCATGCTTTTATATTATGGAACGGAG 57.677 34.615 0.00 0.00 0.00 4.63
491 492 7.390440 TCATGCTTTTATATTATGGAACGGAGG 59.610 37.037 0.00 0.00 0.00 4.30
492 493 6.001460 TGCTTTTATATTATGGAACGGAGGG 58.999 40.000 0.00 0.00 0.00 4.30
493 494 6.183361 TGCTTTTATATTATGGAACGGAGGGA 60.183 38.462 0.00 0.00 0.00 4.20
494 495 6.371825 GCTTTTATATTATGGAACGGAGGGAG 59.628 42.308 0.00 0.00 0.00 4.30
495 496 7.383156 TTTTATATTATGGAACGGAGGGAGT 57.617 36.000 0.00 0.00 0.00 3.85
496 497 8.495160 TTTTATATTATGGAACGGAGGGAGTA 57.505 34.615 0.00 0.00 0.00 2.59
497 498 7.713734 TTATATTATGGAACGGAGGGAGTAG 57.286 40.000 0.00 0.00 0.00 2.57
498 499 3.393426 TTATGGAACGGAGGGAGTAGT 57.607 47.619 0.00 0.00 0.00 2.73
499 500 4.524802 TTATGGAACGGAGGGAGTAGTA 57.475 45.455 0.00 0.00 0.00 1.82
500 501 2.431954 TGGAACGGAGGGAGTAGTAG 57.568 55.000 0.00 0.00 0.00 2.57
501 502 1.031235 GGAACGGAGGGAGTAGTAGC 58.969 60.000 0.00 0.00 0.00 3.58
506 507 1.883209 CGGAGGGAGTAGTAGCTAGCC 60.883 61.905 12.13 0.00 0.00 3.93
542 549 3.069980 GCTGCGACGGGTCAGATCT 62.070 63.158 5.31 0.00 32.26 2.75
590 597 4.080582 TCCGATGATGGGACTGTTTATTGT 60.081 41.667 0.00 0.00 0.00 2.71
611 618 6.336842 TGTACTGTCTTAACTAACTCCACC 57.663 41.667 0.00 0.00 0.00 4.61
612 619 4.886496 ACTGTCTTAACTAACTCCACCC 57.114 45.455 0.00 0.00 0.00 4.61
613 620 4.228824 ACTGTCTTAACTAACTCCACCCA 58.771 43.478 0.00 0.00 0.00 4.51
614 621 4.040095 ACTGTCTTAACTAACTCCACCCAC 59.960 45.833 0.00 0.00 0.00 4.61
615 622 3.006110 TGTCTTAACTAACTCCACCCACG 59.994 47.826 0.00 0.00 0.00 4.94
616 623 2.028748 TCTTAACTAACTCCACCCACGC 60.029 50.000 0.00 0.00 0.00 5.34
683 690 6.005823 TGAATAATCACCCAGGCAATATCAG 58.994 40.000 0.00 0.00 0.00 2.90
707 714 0.036388 TTTCTTGCCCAGCTAGACGG 60.036 55.000 0.00 0.00 39.74 4.79
710 717 0.179000 CTTGCCCAGCTAGACGGATT 59.821 55.000 0.00 0.00 33.57 3.01
733 740 0.032403 AAACGATCGGTGTTCGGTGA 59.968 50.000 20.98 0.00 40.83 4.02
734 741 0.245539 AACGATCGGTGTTCGGTGAT 59.754 50.000 20.98 0.00 40.83 3.06
792 807 2.224185 ACACTTTGCACAGACACGGATA 60.224 45.455 6.92 0.00 0.00 2.59
814 830 5.560966 AAATGTCAACTTAGCATTACCCG 57.439 39.130 0.00 0.00 33.13 5.28
840 856 2.653234 GAGATTGTGCTCCCCATGAT 57.347 50.000 0.00 0.00 0.00 2.45
866 882 6.963796 AGTTCTGCTGAGAAAACTATTGTTG 58.036 36.000 0.00 0.00 40.00 3.33
1224 1273 2.561478 ACTACCAGAAAACGTGCCAT 57.439 45.000 0.00 0.00 0.00 4.40
1239 1288 2.173669 CCATCGCGCCGAAGACATT 61.174 57.895 0.00 0.00 39.99 2.71
1330 1379 3.937706 CTGCTTCATCAGGGTAAGACTTG 59.062 47.826 0.00 0.00 0.00 3.16
1331 1380 3.327757 TGCTTCATCAGGGTAAGACTTGT 59.672 43.478 0.00 0.00 0.00 3.16
1332 1381 3.686726 GCTTCATCAGGGTAAGACTTGTG 59.313 47.826 0.00 0.00 0.00 3.33
1333 1382 3.334583 TCATCAGGGTAAGACTTGTGC 57.665 47.619 0.00 0.00 0.00 4.57
1334 1383 2.637382 TCATCAGGGTAAGACTTGTGCA 59.363 45.455 0.00 0.00 0.00 4.57
1335 1384 2.543777 TCAGGGTAAGACTTGTGCAC 57.456 50.000 10.75 10.75 0.00 4.57
1337 1386 0.034896 AGGGTAAGACTTGTGCACGG 59.965 55.000 13.13 10.15 0.00 4.94
1339 1388 1.338769 GGGTAAGACTTGTGCACGGAT 60.339 52.381 13.13 0.00 0.00 4.18
1351 1400 2.008268 GCACGGATTGATGCTTGGGG 62.008 60.000 0.00 0.00 38.84 4.96
1354 1403 0.107017 CGGATTGATGCTTGGGGTCT 60.107 55.000 0.00 0.00 0.00 3.85
1356 1405 2.460669 GGATTGATGCTTGGGGTCTTT 58.539 47.619 0.00 0.00 0.00 2.52
1362 1411 0.689080 TGCTTGGGGTCTTTTGGCAA 60.689 50.000 0.00 0.00 0.00 4.52
1370 1419 2.407090 GGTCTTTTGGCAATGCTCAAC 58.593 47.619 4.82 0.00 0.00 3.18
1377 1426 6.591062 TCTTTTGGCAATGCTCAACAATAATC 59.409 34.615 4.82 0.00 0.00 1.75
1379 1428 5.001237 TGGCAATGCTCAACAATAATCAG 57.999 39.130 4.82 0.00 0.00 2.90
1384 1702 7.707893 GGCAATGCTCAACAATAATCAGTAATT 59.292 33.333 4.82 0.00 0.00 1.40
1390 1708 9.846248 GCTCAACAATAATCAGTAATTTTCTGT 57.154 29.630 3.38 0.00 34.86 3.41
1415 1735 1.868997 CATCAACGTGTGGGCTGAC 59.131 57.895 0.00 0.00 0.00 3.51
1417 1737 2.094757 ATCAACGTGTGGGCTGACGA 62.095 55.000 9.77 0.00 38.94 4.20
1428 1748 0.097674 GGCTGACGAATCATGTGTGC 59.902 55.000 0.00 0.00 33.22 4.57
1429 1749 0.798159 GCTGACGAATCATGTGTGCA 59.202 50.000 0.00 0.00 33.22 4.57
1432 1752 0.790207 GACGAATCATGTGTGCACGT 59.210 50.000 13.13 2.22 33.58 4.49
1435 1755 1.460743 CGAATCATGTGTGCACGTCTT 59.539 47.619 13.13 3.52 0.00 3.01
1436 1756 2.722706 CGAATCATGTGTGCACGTCTTG 60.723 50.000 13.13 15.03 0.00 3.02
1437 1757 2.168326 ATCATGTGTGCACGTCTTGA 57.832 45.000 22.41 22.41 0.00 3.02
1438 1758 2.168326 TCATGTGTGCACGTCTTGAT 57.832 45.000 13.13 0.00 0.00 2.57
1439 1759 1.799994 TCATGTGTGCACGTCTTGATG 59.200 47.619 13.13 7.63 0.00 3.07
1440 1760 0.518636 ATGTGTGCACGTCTTGATGC 59.481 50.000 13.13 0.00 42.40 3.91
1448 1768 2.355756 GCACGTCTTGATGCATGGTTAT 59.644 45.455 2.46 0.00 41.65 1.89
1482 1802 1.213013 CGACGCCTCTGTGCTACTT 59.787 57.895 0.00 0.00 0.00 2.24
1486 1806 1.073216 CGCCTCTGTGCTACTTGACG 61.073 60.000 0.00 0.00 0.00 4.35
1597 1920 1.671742 GAGAAGGAGTGCGGGAACA 59.328 57.895 0.00 0.00 0.00 3.18
1620 1943 0.744281 TCTCATGCGCCGATGTCTTA 59.256 50.000 4.18 0.00 0.00 2.10
1662 1985 2.808543 CACCTACTTCCTCAGCAACAAC 59.191 50.000 0.00 0.00 0.00 3.32
1983 2306 1.600636 CACGGTGGTGCAGGACATT 60.601 57.895 0.00 0.00 37.35 2.71
1999 2322 2.492088 GACATTAAGACCCCCAACAAGC 59.508 50.000 0.00 0.00 0.00 4.01
2046 2369 0.465460 TCAGCCACGAGGTGCTTTTT 60.465 50.000 0.00 0.00 43.95 1.94
2315 2638 1.758936 TGCTTTCTCATGAGCATGGG 58.241 50.000 18.36 7.29 43.46 4.00
2320 2643 4.499357 GCTTTCTCATGAGCATGGGATTTC 60.499 45.833 18.36 2.98 46.70 2.17
2326 2649 5.375773 TCATGAGCATGGGATTTCGATTTA 58.624 37.500 10.31 0.00 39.24 1.40
2364 2687 8.877864 TGTTAAATTGATTTACTGGTCCTGAT 57.122 30.769 2.23 0.00 32.42 2.90
2405 2729 7.521871 ACCTCCCTTACTACTATTGTATTCG 57.478 40.000 0.00 0.00 0.00 3.34
2443 2768 7.175990 TCCTTGGGTTTGAACTGTAATAACATC 59.824 37.037 0.00 0.00 34.37 3.06
2530 2860 5.584253 TCAAATGTTTTTCCTTCCGTTCA 57.416 34.783 0.00 0.00 0.00 3.18
2614 2944 4.773323 AAAGCTGAACTAAAGTCCATGC 57.227 40.909 0.00 0.00 0.00 4.06
2622 2952 2.031157 ACTAAAGTCCATGCGTTGCAAC 60.031 45.455 19.89 19.89 43.62 4.17
2630 2960 1.237285 ATGCGTTGCAACAGGAGACC 61.237 55.000 28.01 9.05 43.62 3.85
2632 2962 1.237285 GCGTTGCAACAGGAGACCAT 61.237 55.000 28.01 0.00 0.00 3.55
2633 2963 0.518636 CGTTGCAACAGGAGACCATG 59.481 55.000 28.01 4.98 0.00 3.66
2641 2971 4.159135 GCAACAGGAGACCATGAAAATCAT 59.841 41.667 0.00 0.00 37.65 2.45
2646 2976 5.762218 CAGGAGACCATGAAAATCATACTCC 59.238 44.000 20.32 20.32 43.21 3.85
2648 2978 5.397899 GGAGACCATGAAAATCATACTCCCA 60.398 44.000 18.78 0.00 40.60 4.37
2656 2986 6.736581 TGAAAATCATACTCCCATAACCCAA 58.263 36.000 0.00 0.00 0.00 4.12
3003 3333 5.774498 GTCAACAAACTCCTTGAAATCCT 57.226 39.130 0.00 0.00 38.50 3.24
3004 3334 5.763088 GTCAACAAACTCCTTGAAATCCTC 58.237 41.667 0.00 0.00 38.50 3.71
3005 3335 4.827284 TCAACAAACTCCTTGAAATCCTCC 59.173 41.667 0.00 0.00 38.50 4.30
3006 3336 4.453480 ACAAACTCCTTGAAATCCTCCA 57.547 40.909 0.00 0.00 38.50 3.86
3007 3337 4.145052 ACAAACTCCTTGAAATCCTCCAC 58.855 43.478 0.00 0.00 38.50 4.02
3008 3338 2.770164 ACTCCTTGAAATCCTCCACG 57.230 50.000 0.00 0.00 0.00 4.94
3009 3339 1.978580 ACTCCTTGAAATCCTCCACGT 59.021 47.619 0.00 0.00 0.00 4.49
3010 3340 2.372172 ACTCCTTGAAATCCTCCACGTT 59.628 45.455 0.00 0.00 0.00 3.99
3011 3341 2.744202 CTCCTTGAAATCCTCCACGTTG 59.256 50.000 0.00 0.00 0.00 4.10
3012 3342 1.200020 CCTTGAAATCCTCCACGTTGC 59.800 52.381 0.00 0.00 0.00 4.17
3013 3343 1.200020 CTTGAAATCCTCCACGTTGCC 59.800 52.381 0.00 0.00 0.00 4.52
3014 3344 0.109532 TGAAATCCTCCACGTTGCCA 59.890 50.000 0.00 0.00 0.00 4.92
3015 3345 0.521735 GAAATCCTCCACGTTGCCAC 59.478 55.000 0.00 0.00 0.00 5.01
3016 3346 0.179004 AAATCCTCCACGTTGCCACA 60.179 50.000 0.00 0.00 0.00 4.17
3017 3347 0.038166 AATCCTCCACGTTGCCACAT 59.962 50.000 0.00 0.00 0.00 3.21
3018 3348 0.677731 ATCCTCCACGTTGCCACATG 60.678 55.000 0.00 0.00 0.00 3.21
3019 3349 1.302431 CCTCCACGTTGCCACATGA 60.302 57.895 0.00 0.00 0.00 3.07
3020 3350 0.888736 CCTCCACGTTGCCACATGAA 60.889 55.000 0.00 0.00 0.00 2.57
3021 3351 0.950836 CTCCACGTTGCCACATGAAA 59.049 50.000 0.00 0.00 0.00 2.69
3022 3352 1.336440 CTCCACGTTGCCACATGAAAA 59.664 47.619 0.00 0.00 0.00 2.29
3023 3353 1.751351 TCCACGTTGCCACATGAAAAA 59.249 42.857 0.00 0.00 0.00 1.94
3024 3354 1.857837 CCACGTTGCCACATGAAAAAC 59.142 47.619 0.00 0.00 0.00 2.43
3025 3355 2.534298 CACGTTGCCACATGAAAAACA 58.466 42.857 0.00 0.00 0.00 2.83
3026 3356 2.926200 CACGTTGCCACATGAAAAACAA 59.074 40.909 0.00 0.00 0.00 2.83
3027 3357 2.926838 ACGTTGCCACATGAAAAACAAC 59.073 40.909 0.00 5.82 35.28 3.32
3028 3358 2.926200 CGTTGCCACATGAAAAACAACA 59.074 40.909 0.00 0.00 37.77 3.33
3029 3359 3.555139 CGTTGCCACATGAAAAACAACAT 59.445 39.130 0.00 0.00 37.77 2.71
3030 3360 4.742167 CGTTGCCACATGAAAAACAACATA 59.258 37.500 0.00 0.00 37.77 2.29
3031 3361 5.233050 CGTTGCCACATGAAAAACAACATAA 59.767 36.000 0.00 0.00 37.77 1.90
3032 3362 6.237942 CGTTGCCACATGAAAAACAACATAAA 60.238 34.615 0.00 0.00 37.77 1.40
3033 3363 7.467623 GTTGCCACATGAAAAACAACATAAAA 58.532 30.769 0.00 0.00 37.81 1.52
3034 3364 7.615582 TGCCACATGAAAAACAACATAAAAA 57.384 28.000 0.00 0.00 0.00 1.94
3035 3365 8.218338 TGCCACATGAAAAACAACATAAAAAT 57.782 26.923 0.00 0.00 0.00 1.82
3036 3366 9.330063 TGCCACATGAAAAACAACATAAAAATA 57.670 25.926 0.00 0.00 0.00 1.40
3059 3389 5.274881 TGTGTTGCACAAAAACATGAAAC 57.725 34.783 0.00 0.00 41.69 2.78
3060 3390 4.993584 TGTGTTGCACAAAAACATGAAACT 59.006 33.333 0.00 0.00 41.69 2.66
3061 3391 6.159293 TGTGTTGCACAAAAACATGAAACTA 58.841 32.000 0.00 0.00 41.69 2.24
3062 3392 6.309980 TGTGTTGCACAAAAACATGAAACTAG 59.690 34.615 0.00 0.00 41.69 2.57
3063 3393 6.529829 GTGTTGCACAAAAACATGAAACTAGA 59.470 34.615 0.00 0.00 39.57 2.43
3064 3394 7.222611 GTGTTGCACAAAAACATGAAACTAGAT 59.777 33.333 0.00 0.00 39.57 1.98
3065 3395 8.409371 TGTTGCACAAAAACATGAAACTAGATA 58.591 29.630 0.00 0.00 32.71 1.98
3066 3396 8.905702 GTTGCACAAAAACATGAAACTAGATAG 58.094 33.333 0.00 0.00 0.00 2.08
3067 3397 8.389779 TGCACAAAAACATGAAACTAGATAGA 57.610 30.769 0.00 0.00 0.00 1.98
3068 3398 9.013229 TGCACAAAAACATGAAACTAGATAGAT 57.987 29.630 0.00 0.00 0.00 1.98
3069 3399 9.846248 GCACAAAAACATGAAACTAGATAGATT 57.154 29.630 0.00 0.00 0.00 2.40
3077 3407 9.751542 ACATGAAACTAGATAGATTTCGTAAGG 57.248 33.333 0.00 0.00 35.51 2.69
3078 3408 9.197694 CATGAAACTAGATAGATTTCGTAAGGG 57.802 37.037 0.00 0.00 35.51 3.95
3079 3409 8.302515 TGAAACTAGATAGATTTCGTAAGGGT 57.697 34.615 0.00 0.00 35.51 4.34
3080 3410 9.412460 TGAAACTAGATAGATTTCGTAAGGGTA 57.588 33.333 0.00 0.00 35.51 3.69
3084 3414 9.584008 ACTAGATAGATTTCGTAAGGGTATTGA 57.416 33.333 0.00 0.00 38.47 2.57
3087 3417 8.368668 AGATAGATTTCGTAAGGGTATTGAAGG 58.631 37.037 0.00 0.00 38.47 3.46
3088 3418 6.309389 AGATTTCGTAAGGGTATTGAAGGT 57.691 37.500 0.00 0.00 38.47 3.50
3089 3419 6.113411 AGATTTCGTAAGGGTATTGAAGGTG 58.887 40.000 0.00 0.00 38.47 4.00
3090 3420 4.895668 TTCGTAAGGGTATTGAAGGTGT 57.104 40.909 0.00 0.00 38.47 4.16
3091 3421 4.196626 TCGTAAGGGTATTGAAGGTGTG 57.803 45.455 0.00 0.00 38.47 3.82
3092 3422 3.579586 TCGTAAGGGTATTGAAGGTGTGT 59.420 43.478 0.00 0.00 38.47 3.72
3093 3423 3.682858 CGTAAGGGTATTGAAGGTGTGTG 59.317 47.826 0.00 0.00 0.00 3.82
3094 3424 2.200373 AGGGTATTGAAGGTGTGTGC 57.800 50.000 0.00 0.00 0.00 4.57
3095 3425 1.423541 AGGGTATTGAAGGTGTGTGCA 59.576 47.619 0.00 0.00 0.00 4.57
3096 3426 2.158534 AGGGTATTGAAGGTGTGTGCAA 60.159 45.455 0.00 0.00 0.00 4.08
3097 3427 2.825532 GGGTATTGAAGGTGTGTGCAAT 59.174 45.455 0.00 0.00 35.38 3.56
3098 3428 3.367292 GGGTATTGAAGGTGTGTGCAATG 60.367 47.826 0.00 0.00 33.45 2.82
3099 3429 2.443887 ATTGAAGGTGTGTGCAATGC 57.556 45.000 0.00 0.00 30.43 3.56
3100 3430 0.388659 TTGAAGGTGTGTGCAATGCC 59.611 50.000 1.53 0.00 0.00 4.40
3101 3431 1.290009 GAAGGTGTGTGCAATGCCC 59.710 57.895 1.53 0.00 0.00 5.36
3102 3432 1.457267 AAGGTGTGTGCAATGCCCA 60.457 52.632 1.53 0.00 0.00 5.36
3103 3433 1.047596 AAGGTGTGTGCAATGCCCAA 61.048 50.000 1.53 0.00 0.00 4.12
3104 3434 1.047596 AGGTGTGTGCAATGCCCAAA 61.048 50.000 1.53 0.00 0.00 3.28
3105 3435 0.179062 GGTGTGTGCAATGCCCAAAA 60.179 50.000 1.53 0.00 0.00 2.44
3106 3436 1.661341 GTGTGTGCAATGCCCAAAAA 58.339 45.000 1.53 0.00 0.00 1.94
3131 3461 9.698309 AAATATGAATCGTGACTAACCTATGAG 57.302 33.333 0.00 0.00 0.00 2.90
3132 3462 5.515797 TGAATCGTGACTAACCTATGAGG 57.484 43.478 0.00 0.00 42.49 3.86
3146 3476 5.713792 CCTATGAGGTACTGATGGTGTAG 57.286 47.826 0.00 0.00 41.55 2.74
3147 3477 5.141182 CCTATGAGGTACTGATGGTGTAGT 58.859 45.833 0.00 0.00 41.55 2.73
3148 3478 5.010112 CCTATGAGGTACTGATGGTGTAGTG 59.990 48.000 0.00 0.00 41.55 2.74
3149 3479 3.096852 TGAGGTACTGATGGTGTAGTGG 58.903 50.000 0.00 0.00 41.55 4.00
3150 3480 3.245479 TGAGGTACTGATGGTGTAGTGGA 60.245 47.826 0.00 0.00 41.55 4.02
3151 3481 3.767673 GAGGTACTGATGGTGTAGTGGAA 59.232 47.826 0.00 0.00 41.55 3.53
3152 3482 4.164981 AGGTACTGATGGTGTAGTGGAAA 58.835 43.478 0.00 0.00 37.18 3.13
3153 3483 4.223032 AGGTACTGATGGTGTAGTGGAAAG 59.777 45.833 0.00 0.00 37.18 2.62
3154 3484 3.059352 ACTGATGGTGTAGTGGAAAGC 57.941 47.619 0.00 0.00 0.00 3.51
3155 3485 2.371841 ACTGATGGTGTAGTGGAAAGCA 59.628 45.455 0.00 0.00 0.00 3.91
3156 3486 3.009473 ACTGATGGTGTAGTGGAAAGCAT 59.991 43.478 0.00 0.00 34.88 3.79
3157 3487 3.346315 TGATGGTGTAGTGGAAAGCATG 58.654 45.455 0.00 0.00 32.48 4.06
3158 3488 2.198827 TGGTGTAGTGGAAAGCATGG 57.801 50.000 0.00 0.00 0.00 3.66
3159 3489 1.702401 TGGTGTAGTGGAAAGCATGGA 59.298 47.619 0.00 0.00 0.00 3.41
3160 3490 2.107378 TGGTGTAGTGGAAAGCATGGAA 59.893 45.455 0.00 0.00 0.00 3.53
3161 3491 3.245229 TGGTGTAGTGGAAAGCATGGAAT 60.245 43.478 0.00 0.00 0.00 3.01
3162 3492 3.763897 GGTGTAGTGGAAAGCATGGAATT 59.236 43.478 0.00 0.00 0.00 2.17
3163 3493 4.220602 GGTGTAGTGGAAAGCATGGAATTT 59.779 41.667 0.00 0.00 0.00 1.82
3164 3494 5.163513 GTGTAGTGGAAAGCATGGAATTTG 58.836 41.667 0.00 0.00 0.00 2.32
3165 3495 3.967332 AGTGGAAAGCATGGAATTTGG 57.033 42.857 0.00 0.00 0.00 3.28
3166 3496 3.509442 AGTGGAAAGCATGGAATTTGGA 58.491 40.909 0.00 0.00 0.00 3.53
3167 3497 4.098894 AGTGGAAAGCATGGAATTTGGAT 58.901 39.130 0.00 0.00 0.00 3.41
3168 3498 4.533311 AGTGGAAAGCATGGAATTTGGATT 59.467 37.500 0.00 0.00 0.00 3.01
3169 3499 5.013391 AGTGGAAAGCATGGAATTTGGATTT 59.987 36.000 0.00 0.00 0.00 2.17
3170 3500 5.706833 GTGGAAAGCATGGAATTTGGATTTT 59.293 36.000 0.00 0.00 0.00 1.82
3171 3501 6.207221 GTGGAAAGCATGGAATTTGGATTTTT 59.793 34.615 0.00 0.00 0.00 1.94
3172 3502 6.207025 TGGAAAGCATGGAATTTGGATTTTTG 59.793 34.615 0.00 0.00 0.00 2.44
3173 3503 6.349528 GGAAAGCATGGAATTTGGATTTTTGG 60.350 38.462 0.00 0.00 0.00 3.28
3174 3504 5.245584 AGCATGGAATTTGGATTTTTGGT 57.754 34.783 0.00 0.00 0.00 3.67
3175 3505 5.633117 AGCATGGAATTTGGATTTTTGGTT 58.367 33.333 0.00 0.00 0.00 3.67
3176 3506 5.474189 AGCATGGAATTTGGATTTTTGGTTG 59.526 36.000 0.00 0.00 0.00 3.77
3177 3507 5.472820 GCATGGAATTTGGATTTTTGGTTGA 59.527 36.000 0.00 0.00 0.00 3.18
3178 3508 6.151480 GCATGGAATTTGGATTTTTGGTTGAT 59.849 34.615 0.00 0.00 0.00 2.57
3179 3509 7.531716 CATGGAATTTGGATTTTTGGTTGATG 58.468 34.615 0.00 0.00 0.00 3.07
3180 3510 6.599445 TGGAATTTGGATTTTTGGTTGATGT 58.401 32.000 0.00 0.00 0.00 3.06
3181 3511 7.059156 TGGAATTTGGATTTTTGGTTGATGTT 58.941 30.769 0.00 0.00 0.00 2.71
3182 3512 7.559170 TGGAATTTGGATTTTTGGTTGATGTTT 59.441 29.630 0.00 0.00 0.00 2.83
3183 3513 9.061435 GGAATTTGGATTTTTGGTTGATGTTTA 57.939 29.630 0.00 0.00 0.00 2.01
3189 3519 9.401058 TGGATTTTTGGTTGATGTTTAAATTGT 57.599 25.926 0.00 0.00 0.00 2.71
3196 3526 8.664211 TGGTTGATGTTTAAATTGTTTTACCC 57.336 30.769 0.00 0.00 0.00 3.69
3197 3527 7.438459 TGGTTGATGTTTAAATTGTTTTACCCG 59.562 33.333 0.00 0.00 0.00 5.28
3198 3528 7.438757 GGTTGATGTTTAAATTGTTTTACCCGT 59.561 33.333 0.00 0.00 0.00 5.28
3199 3529 8.481641 GTTGATGTTTAAATTGTTTTACCCGTC 58.518 33.333 0.00 0.00 0.00 4.79
3200 3530 7.146648 TGATGTTTAAATTGTTTTACCCGTCC 58.853 34.615 0.00 0.00 0.00 4.79
3201 3531 6.712179 TGTTTAAATTGTTTTACCCGTCCT 57.288 33.333 0.00 0.00 0.00 3.85
3202 3532 6.505272 TGTTTAAATTGTTTTACCCGTCCTG 58.495 36.000 0.00 0.00 0.00 3.86
3203 3533 6.320672 TGTTTAAATTGTTTTACCCGTCCTGA 59.679 34.615 0.00 0.00 0.00 3.86
3204 3534 6.956202 TTAAATTGTTTTACCCGTCCTGAA 57.044 33.333 0.00 0.00 0.00 3.02
3205 3535 5.855740 AAATTGTTTTACCCGTCCTGAAA 57.144 34.783 0.00 0.00 0.00 2.69
3206 3536 5.855740 AATTGTTTTACCCGTCCTGAAAA 57.144 34.783 0.00 0.00 0.00 2.29
3207 3537 6.413783 AATTGTTTTACCCGTCCTGAAAAT 57.586 33.333 0.00 0.00 0.00 1.82
3208 3538 5.441709 TTGTTTTACCCGTCCTGAAAATC 57.558 39.130 0.00 0.00 0.00 2.17
3209 3539 3.822167 TGTTTTACCCGTCCTGAAAATCC 59.178 43.478 0.00 0.00 0.00 3.01
3210 3540 2.389962 TTACCCGTCCTGAAAATCCG 57.610 50.000 0.00 0.00 0.00 4.18
3211 3541 0.538118 TACCCGTCCTGAAAATCCGG 59.462 55.000 0.00 0.00 38.39 5.14
3212 3542 4.218722 CCGTCCTGAAAATCCGGG 57.781 61.111 0.00 0.00 35.11 5.73
3213 3543 2.112815 CCGTCCTGAAAATCCGGGC 61.113 63.158 0.00 0.00 35.11 6.13
3214 3544 2.112815 CGTCCTGAAAATCCGGGCC 61.113 63.158 0.00 0.00 32.56 5.80
3215 3545 2.112815 GTCCTGAAAATCCGGGCCG 61.113 63.158 21.46 21.46 32.56 6.13
3225 3555 2.348243 CCGGGCCGGTACTCAAAA 59.652 61.111 36.52 0.00 42.73 2.44
3226 3556 1.743995 CCGGGCCGGTACTCAAAAG 60.744 63.158 36.52 6.98 42.73 2.27
3227 3557 1.294138 CGGGCCGGTACTCAAAAGA 59.706 57.895 20.56 0.00 0.00 2.52
3228 3558 0.320946 CGGGCCGGTACTCAAAAGAA 60.321 55.000 20.56 0.00 0.00 2.52
3229 3559 1.677820 CGGGCCGGTACTCAAAAGAAT 60.678 52.381 20.56 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 5.562506 TTCCAACAAAAATGTACGTGACA 57.437 34.783 0.00 0.00 43.97 3.58
58 59 5.974751 ACATTCCAACAAAAATGTACGTGAC 59.025 36.000 0.00 0.00 42.67 3.67
59 60 5.974158 CACATTCCAACAAAAATGTACGTGA 59.026 36.000 0.00 0.00 42.62 4.35
60 61 5.974158 TCACATTCCAACAAAAATGTACGTG 59.026 36.000 0.00 0.00 42.62 4.49
61 62 5.974751 GTCACATTCCAACAAAAATGTACGT 59.025 36.000 0.00 0.00 42.62 3.57
62 63 5.974158 TGTCACATTCCAACAAAAATGTACG 59.026 36.000 0.83 0.00 42.62 3.67
63 64 7.945033 ATGTCACATTCCAACAAAAATGTAC 57.055 32.000 0.83 0.00 42.62 2.90
64 65 8.954950 AAATGTCACATTCCAACAAAAATGTA 57.045 26.923 2.74 0.00 42.62 2.29
65 66 7.862512 AAATGTCACATTCCAACAAAAATGT 57.137 28.000 2.74 0.00 44.72 2.71
105 106 9.932207 AAGCAATCAGATCATGTTTATGAAAAA 57.068 25.926 0.00 0.00 45.82 1.94
106 107 9.932207 AAAGCAATCAGATCATGTTTATGAAAA 57.068 25.926 0.00 0.00 45.82 2.29
109 110 8.843262 CCTAAAGCAATCAGATCATGTTTATGA 58.157 33.333 0.00 0.00 46.67 2.15
110 111 8.627403 ACCTAAAGCAATCAGATCATGTTTATG 58.373 33.333 0.00 0.00 35.57 1.90
111 112 8.757982 ACCTAAAGCAATCAGATCATGTTTAT 57.242 30.769 0.00 0.00 0.00 1.40
112 113 8.579850 AACCTAAAGCAATCAGATCATGTTTA 57.420 30.769 0.00 0.00 0.00 2.01
113 114 7.472334 AACCTAAAGCAATCAGATCATGTTT 57.528 32.000 0.00 0.00 0.00 2.83
114 115 7.472334 AAACCTAAAGCAATCAGATCATGTT 57.528 32.000 0.00 0.00 0.00 2.71
115 116 7.472334 AAAACCTAAAGCAATCAGATCATGT 57.528 32.000 0.00 0.00 0.00 3.21
139 140 0.958091 CCATGCGTGGGTGAGAAAAA 59.042 50.000 17.90 0.00 42.11 1.94
140 141 1.523154 GCCATGCGTGGGTGAGAAAA 61.523 55.000 26.22 0.00 46.14 2.29
141 142 1.971167 GCCATGCGTGGGTGAGAAA 60.971 57.895 26.22 0.00 46.14 2.52
142 143 2.359850 GCCATGCGTGGGTGAGAA 60.360 61.111 26.22 0.00 46.14 2.87
148 149 2.098426 AAACCAAAGCCATGCGTGGG 62.098 55.000 26.22 11.56 46.14 4.61
150 151 2.652941 ATAAACCAAAGCCATGCGTG 57.347 45.000 0.00 0.00 0.00 5.34
151 152 3.951037 TCATATAAACCAAAGCCATGCGT 59.049 39.130 0.00 0.00 0.00 5.24
152 153 4.566545 TCATATAAACCAAAGCCATGCG 57.433 40.909 0.00 0.00 0.00 4.73
153 154 7.632721 CAAATTCATATAAACCAAAGCCATGC 58.367 34.615 0.00 0.00 0.00 4.06
154 155 7.496591 AGCAAATTCATATAAACCAAAGCCATG 59.503 33.333 0.00 0.00 0.00 3.66
155 156 7.567458 AGCAAATTCATATAAACCAAAGCCAT 58.433 30.769 0.00 0.00 0.00 4.40
156 157 6.945218 AGCAAATTCATATAAACCAAAGCCA 58.055 32.000 0.00 0.00 0.00 4.75
157 158 9.546428 AATAGCAAATTCATATAAACCAAAGCC 57.454 29.630 0.00 0.00 0.00 4.35
168 169 8.915057 ACACTCTAGCAATAGCAAATTCATAT 57.085 30.769 0.00 0.00 45.49 1.78
169 170 8.737168 AACACTCTAGCAATAGCAAATTCATA 57.263 30.769 0.00 0.00 45.49 2.15
170 171 7.636150 AACACTCTAGCAATAGCAAATTCAT 57.364 32.000 0.00 0.00 45.49 2.57
171 172 7.452880 AAACACTCTAGCAATAGCAAATTCA 57.547 32.000 0.00 0.00 45.49 2.57
172 173 8.748380 AAAAACACTCTAGCAATAGCAAATTC 57.252 30.769 0.00 0.00 45.49 2.17
194 195 7.436673 GCTAACACCAACACATGAACATAAAAA 59.563 33.333 0.00 0.00 0.00 1.94
195 196 6.920758 GCTAACACCAACACATGAACATAAAA 59.079 34.615 0.00 0.00 0.00 1.52
196 197 6.264292 AGCTAACACCAACACATGAACATAAA 59.736 34.615 0.00 0.00 0.00 1.40
197 198 5.767665 AGCTAACACCAACACATGAACATAA 59.232 36.000 0.00 0.00 0.00 1.90
198 199 5.312895 AGCTAACACCAACACATGAACATA 58.687 37.500 0.00 0.00 0.00 2.29
199 200 4.144297 AGCTAACACCAACACATGAACAT 58.856 39.130 0.00 0.00 0.00 2.71
200 201 3.550820 AGCTAACACCAACACATGAACA 58.449 40.909 0.00 0.00 0.00 3.18
201 202 5.181245 ACATAGCTAACACCAACACATGAAC 59.819 40.000 0.00 0.00 0.00 3.18
202 203 5.181056 CACATAGCTAACACCAACACATGAA 59.819 40.000 0.00 0.00 0.00 2.57
203 204 4.694982 CACATAGCTAACACCAACACATGA 59.305 41.667 0.00 0.00 0.00 3.07
204 205 4.672542 GCACATAGCTAACACCAACACATG 60.673 45.833 0.00 0.00 41.15 3.21
205 206 3.440173 GCACATAGCTAACACCAACACAT 59.560 43.478 0.00 0.00 41.15 3.21
206 207 2.811431 GCACATAGCTAACACCAACACA 59.189 45.455 0.00 0.00 41.15 3.72
207 208 2.811431 TGCACATAGCTAACACCAACAC 59.189 45.455 0.00 0.00 45.94 3.32
208 209 3.133141 TGCACATAGCTAACACCAACA 57.867 42.857 0.00 0.00 45.94 3.33
209 210 4.396166 AGAATGCACATAGCTAACACCAAC 59.604 41.667 0.00 0.00 45.94 3.77
210 211 4.588899 AGAATGCACATAGCTAACACCAA 58.411 39.130 0.00 0.00 45.94 3.67
211 212 4.220693 AGAATGCACATAGCTAACACCA 57.779 40.909 0.00 0.00 45.94 4.17
212 213 6.867662 ATTAGAATGCACATAGCTAACACC 57.132 37.500 0.00 0.00 45.94 4.16
213 214 9.817365 CATAATTAGAATGCACATAGCTAACAC 57.183 33.333 0.00 0.00 45.94 3.32
227 228 3.438087 CCGGCCTCTGCATAATTAGAATG 59.562 47.826 0.00 0.00 40.13 2.67
228 229 3.327757 TCCGGCCTCTGCATAATTAGAAT 59.672 43.478 0.00 0.00 40.13 2.40
229 230 2.703536 TCCGGCCTCTGCATAATTAGAA 59.296 45.455 0.00 0.00 40.13 2.10
230 231 2.037251 GTCCGGCCTCTGCATAATTAGA 59.963 50.000 0.00 0.00 40.13 2.10
231 232 2.224281 TGTCCGGCCTCTGCATAATTAG 60.224 50.000 0.00 0.00 40.13 1.73
232 233 1.765904 TGTCCGGCCTCTGCATAATTA 59.234 47.619 0.00 0.00 40.13 1.40
233 234 0.546122 TGTCCGGCCTCTGCATAATT 59.454 50.000 0.00 0.00 40.13 1.40
234 235 0.767375 ATGTCCGGCCTCTGCATAAT 59.233 50.000 0.00 0.00 40.13 1.28
235 236 0.179048 CATGTCCGGCCTCTGCATAA 60.179 55.000 0.00 0.00 40.13 1.90
236 237 1.447217 CATGTCCGGCCTCTGCATA 59.553 57.895 0.00 0.00 40.13 3.14
237 238 2.191375 CATGTCCGGCCTCTGCAT 59.809 61.111 0.00 0.00 40.13 3.96
238 239 4.783621 GCATGTCCGGCCTCTGCA 62.784 66.667 0.00 0.00 40.13 4.41
245 246 2.978452 ATACTGAGCGCATGTCCGGC 62.978 60.000 11.47 0.00 0.00 6.13
246 247 0.313987 TATACTGAGCGCATGTCCGG 59.686 55.000 11.47 0.00 0.00 5.14
247 248 2.354109 ATATACTGAGCGCATGTCCG 57.646 50.000 11.47 0.00 0.00 4.79
248 249 7.169982 GGATATAAATATACTGAGCGCATGTCC 59.830 40.741 11.47 2.97 0.00 4.02
249 250 7.923344 AGGATATAAATATACTGAGCGCATGTC 59.077 37.037 11.47 0.00 32.72 3.06
250 251 7.786030 AGGATATAAATATACTGAGCGCATGT 58.214 34.615 11.47 7.73 32.72 3.21
251 252 8.654230 AAGGATATAAATATACTGAGCGCATG 57.346 34.615 11.47 0.71 34.21 4.06
252 253 9.672673 AAAAGGATATAAATATACTGAGCGCAT 57.327 29.630 11.47 0.00 34.21 4.73
253 254 8.935844 CAAAAGGATATAAATATACTGAGCGCA 58.064 33.333 11.47 0.00 34.21 6.09
254 255 9.151471 TCAAAAGGATATAAATATACTGAGCGC 57.849 33.333 0.00 0.00 34.21 5.92
269 270 9.760077 GAATCAAATGAAGCATCAAAAGGATAT 57.240 29.630 0.00 0.00 39.49 1.63
270 271 8.751242 TGAATCAAATGAAGCATCAAAAGGATA 58.249 29.630 0.00 0.00 39.49 2.59
271 272 7.617225 TGAATCAAATGAAGCATCAAAAGGAT 58.383 30.769 0.00 0.00 39.49 3.24
272 273 6.995364 TGAATCAAATGAAGCATCAAAAGGA 58.005 32.000 0.00 0.00 39.49 3.36
273 274 7.661127 TTGAATCAAATGAAGCATCAAAAGG 57.339 32.000 0.00 0.00 39.49 3.11
282 283 9.977762 GGTGAATTTTATTGAATCAAATGAAGC 57.022 29.630 0.00 0.00 0.00 3.86
289 290 9.973450 TCGAAAAGGTGAATTTTATTGAATCAA 57.027 25.926 0.00 0.00 32.62 2.57
290 291 9.973450 TTCGAAAAGGTGAATTTTATTGAATCA 57.027 25.926 0.00 0.00 32.62 2.57
316 317 6.187727 TCTACAGACTCACTTCCCATTTTT 57.812 37.500 0.00 0.00 0.00 1.94
317 318 5.825593 TCTACAGACTCACTTCCCATTTT 57.174 39.130 0.00 0.00 0.00 1.82
318 319 6.380079 AATCTACAGACTCACTTCCCATTT 57.620 37.500 0.00 0.00 0.00 2.32
319 320 7.496346 TTAATCTACAGACTCACTTCCCATT 57.504 36.000 0.00 0.00 0.00 3.16
320 321 7.496346 TTTAATCTACAGACTCACTTCCCAT 57.504 36.000 0.00 0.00 0.00 4.00
321 322 6.928348 TTTAATCTACAGACTCACTTCCCA 57.072 37.500 0.00 0.00 0.00 4.37
322 323 7.824779 ACAATTTAATCTACAGACTCACTTCCC 59.175 37.037 0.00 0.00 0.00 3.97
323 324 8.779354 ACAATTTAATCTACAGACTCACTTCC 57.221 34.615 0.00 0.00 0.00 3.46
352 353 9.890629 AACAAGATGCTAGAATTACAGACAATA 57.109 29.630 0.00 0.00 0.00 1.90
353 354 8.798859 AACAAGATGCTAGAATTACAGACAAT 57.201 30.769 0.00 0.00 0.00 2.71
354 355 9.151471 GTAACAAGATGCTAGAATTACAGACAA 57.849 33.333 0.00 0.00 0.00 3.18
355 356 8.311109 TGTAACAAGATGCTAGAATTACAGACA 58.689 33.333 0.00 0.00 30.00 3.41
356 357 8.703604 TGTAACAAGATGCTAGAATTACAGAC 57.296 34.615 0.00 0.00 30.00 3.51
357 358 9.317936 CATGTAACAAGATGCTAGAATTACAGA 57.682 33.333 0.00 0.00 35.27 3.41
358 359 9.317936 TCATGTAACAAGATGCTAGAATTACAG 57.682 33.333 0.00 0.00 35.27 2.74
359 360 9.665719 TTCATGTAACAAGATGCTAGAATTACA 57.334 29.630 0.00 0.00 36.00 2.41
363 364 9.399797 TGAATTCATGTAACAAGATGCTAGAAT 57.600 29.630 3.38 0.00 0.00 2.40
364 365 8.668353 GTGAATTCATGTAACAAGATGCTAGAA 58.332 33.333 12.12 0.00 0.00 2.10
365 366 7.010460 CGTGAATTCATGTAACAAGATGCTAGA 59.990 37.037 17.93 0.00 0.00 2.43
366 367 7.010460 TCGTGAATTCATGTAACAAGATGCTAG 59.990 37.037 23.63 0.00 34.59 3.42
367 368 6.816140 TCGTGAATTCATGTAACAAGATGCTA 59.184 34.615 23.63 0.92 34.59 3.49
368 369 5.643348 TCGTGAATTCATGTAACAAGATGCT 59.357 36.000 23.63 0.00 34.59 3.79
369 370 5.868257 TCGTGAATTCATGTAACAAGATGC 58.132 37.500 23.63 1.33 34.59 3.91
370 371 7.802720 TGTTTCGTGAATTCATGTAACAAGATG 59.197 33.333 33.06 8.55 44.43 2.90
371 372 7.870826 TGTTTCGTGAATTCATGTAACAAGAT 58.129 30.769 33.06 0.00 44.43 2.40
372 373 7.252965 TGTTTCGTGAATTCATGTAACAAGA 57.747 32.000 33.06 19.93 44.43 3.02
376 377 6.246332 CGTCATGTTTCGTGAATTCATGTAAC 59.754 38.462 29.16 29.16 40.94 2.50
377 378 6.303370 CGTCATGTTTCGTGAATTCATGTAA 58.697 36.000 23.63 18.67 35.99 2.41
378 379 5.163903 CCGTCATGTTTCGTGAATTCATGTA 60.164 40.000 23.63 14.13 35.99 2.29
379 380 4.378356 CCGTCATGTTTCGTGAATTCATGT 60.378 41.667 23.63 4.92 35.99 3.21
380 381 4.090729 CCGTCATGTTTCGTGAATTCATG 58.909 43.478 19.75 19.75 35.93 3.07
381 382 3.751175 ACCGTCATGTTTCGTGAATTCAT 59.249 39.130 12.12 0.00 30.77 2.57
382 383 3.135225 ACCGTCATGTTTCGTGAATTCA 58.865 40.909 3.38 3.38 30.77 2.57
383 384 3.424433 GGACCGTCATGTTTCGTGAATTC 60.424 47.826 0.00 0.00 30.77 2.17
384 385 2.482721 GGACCGTCATGTTTCGTGAATT 59.517 45.455 0.00 0.00 30.77 2.17
385 386 2.073816 GGACCGTCATGTTTCGTGAAT 58.926 47.619 0.00 0.00 30.77 2.57
386 387 1.504359 GGACCGTCATGTTTCGTGAA 58.496 50.000 0.00 0.00 30.77 3.18
387 388 0.665068 CGGACCGTCATGTTTCGTGA 60.665 55.000 5.48 0.00 0.00 4.35
388 389 1.623081 CCGGACCGTCATGTTTCGTG 61.623 60.000 13.94 0.00 0.00 4.35
389 390 1.373748 CCGGACCGTCATGTTTCGT 60.374 57.895 13.94 0.00 0.00 3.85
390 391 2.736682 GCCGGACCGTCATGTTTCG 61.737 63.158 13.94 0.00 0.00 3.46
391 392 2.396157 GGCCGGACCGTCATGTTTC 61.396 63.158 13.94 0.00 0.00 2.78
392 393 1.546589 TAGGCCGGACCGTCATGTTT 61.547 55.000 13.94 0.00 46.52 2.83
393 394 1.335132 ATAGGCCGGACCGTCATGTT 61.335 55.000 13.94 0.00 46.52 2.71
394 395 1.335132 AATAGGCCGGACCGTCATGT 61.335 55.000 13.94 0.00 46.52 3.21
395 396 0.677288 TAATAGGCCGGACCGTCATG 59.323 55.000 13.94 0.00 46.52 3.07
396 397 0.677842 GTAATAGGCCGGACCGTCAT 59.322 55.000 13.94 0.00 46.52 3.06
397 398 1.727511 CGTAATAGGCCGGACCGTCA 61.728 60.000 13.94 0.00 46.52 4.35
398 399 1.008079 CGTAATAGGCCGGACCGTC 60.008 63.158 13.94 0.00 46.52 4.79
399 400 0.465460 TACGTAATAGGCCGGACCGT 60.465 55.000 13.94 13.16 46.52 4.83
400 401 0.239347 CTACGTAATAGGCCGGACCG 59.761 60.000 1.76 6.99 46.52 4.79
401 402 0.600057 CCTACGTAATAGGCCGGACC 59.400 60.000 1.76 4.96 44.36 4.46
408 409 4.322049 AAGCTATGCTGCCTACGTAATAGG 60.322 45.833 10.29 5.39 45.69 2.57
409 410 4.442375 AGCTATGCTGCCTACGTAATAG 57.558 45.455 0.00 1.22 37.57 1.73
410 411 4.038763 ACAAGCTATGCTGCCTACGTAATA 59.961 41.667 0.00 0.00 39.62 0.98
411 412 3.181465 ACAAGCTATGCTGCCTACGTAAT 60.181 43.478 0.00 0.00 39.62 1.89
412 413 2.167693 ACAAGCTATGCTGCCTACGTAA 59.832 45.455 0.00 0.00 39.62 3.18
413 414 1.754803 ACAAGCTATGCTGCCTACGTA 59.245 47.619 0.00 0.00 39.62 3.57
414 415 0.537188 ACAAGCTATGCTGCCTACGT 59.463 50.000 0.00 0.00 39.62 3.57
415 416 1.212616 GACAAGCTATGCTGCCTACG 58.787 55.000 0.00 0.00 39.62 3.51
416 417 2.315925 TGACAAGCTATGCTGCCTAC 57.684 50.000 0.00 0.00 39.62 3.18
417 418 2.486013 CCATGACAAGCTATGCTGCCTA 60.486 50.000 0.00 0.00 39.62 3.93
418 419 1.676746 CATGACAAGCTATGCTGCCT 58.323 50.000 0.00 0.00 39.62 4.75
419 420 0.666913 CCATGACAAGCTATGCTGCC 59.333 55.000 0.00 0.00 39.62 4.85
420 421 1.386533 ACCATGACAAGCTATGCTGC 58.613 50.000 0.00 0.00 39.62 5.25
421 422 5.061853 AGATTACCATGACAAGCTATGCTG 58.938 41.667 0.00 0.00 39.62 4.41
422 423 5.301835 AGATTACCATGACAAGCTATGCT 57.698 39.130 0.00 0.00 42.56 3.79
423 424 6.875726 TGATAGATTACCATGACAAGCTATGC 59.124 38.462 16.73 11.15 34.43 3.14
424 425 9.445878 AATGATAGATTACCATGACAAGCTATG 57.554 33.333 16.73 0.00 34.43 2.23
426 427 9.929180 GTAATGATAGATTACCATGACAAGCTA 57.071 33.333 0.00 0.31 0.00 3.32
427 428 7.600375 CGTAATGATAGATTACCATGACAAGCT 59.400 37.037 0.00 0.00 32.43 3.74
428 429 7.385205 ACGTAATGATAGATTACCATGACAAGC 59.615 37.037 0.00 0.00 32.43 4.01
429 430 8.818141 ACGTAATGATAGATTACCATGACAAG 57.182 34.615 0.00 0.00 32.43 3.16
431 432 9.908152 CTTACGTAATGATAGATTACCATGACA 57.092 33.333 8.76 0.00 32.43 3.58
432 433 9.909644 ACTTACGTAATGATAGATTACCATGAC 57.090 33.333 8.76 0.00 32.43 3.06
445 446 9.547753 AGCATGAAAGAATACTTACGTAATGAT 57.452 29.630 8.76 2.48 35.05 2.45
446 447 8.942338 AGCATGAAAGAATACTTACGTAATGA 57.058 30.769 8.76 0.00 35.05 2.57
447 448 9.988350 AAAGCATGAAAGAATACTTACGTAATG 57.012 29.630 8.76 5.91 35.05 1.90
462 463 9.398170 CCGTTCCATAATATAAAAGCATGAAAG 57.602 33.333 0.00 0.00 0.00 2.62
463 464 9.126151 TCCGTTCCATAATATAAAAGCATGAAA 57.874 29.630 0.00 0.00 0.00 2.69
464 465 8.684386 TCCGTTCCATAATATAAAAGCATGAA 57.316 30.769 0.00 0.00 0.00 2.57
465 466 7.390440 CCTCCGTTCCATAATATAAAAGCATGA 59.610 37.037 0.00 0.00 0.00 3.07
466 467 7.362056 CCCTCCGTTCCATAATATAAAAGCATG 60.362 40.741 0.00 0.00 0.00 4.06
467 468 6.659242 CCCTCCGTTCCATAATATAAAAGCAT 59.341 38.462 0.00 0.00 0.00 3.79
468 469 6.001460 CCCTCCGTTCCATAATATAAAAGCA 58.999 40.000 0.00 0.00 0.00 3.91
469 470 6.235664 TCCCTCCGTTCCATAATATAAAAGC 58.764 40.000 0.00 0.00 0.00 3.51
470 471 7.450903 ACTCCCTCCGTTCCATAATATAAAAG 58.549 38.462 0.00 0.00 0.00 2.27
471 472 7.383156 ACTCCCTCCGTTCCATAATATAAAA 57.617 36.000 0.00 0.00 0.00 1.52
472 473 7.731688 ACTACTCCCTCCGTTCCATAATATAAA 59.268 37.037 0.00 0.00 0.00 1.40
473 474 7.243824 ACTACTCCCTCCGTTCCATAATATAA 58.756 38.462 0.00 0.00 0.00 0.98
474 475 6.797707 ACTACTCCCTCCGTTCCATAATATA 58.202 40.000 0.00 0.00 0.00 0.86
475 476 5.652324 ACTACTCCCTCCGTTCCATAATAT 58.348 41.667 0.00 0.00 0.00 1.28
476 477 5.070823 ACTACTCCCTCCGTTCCATAATA 57.929 43.478 0.00 0.00 0.00 0.98
477 478 3.924922 ACTACTCCCTCCGTTCCATAAT 58.075 45.455 0.00 0.00 0.00 1.28
478 479 3.393426 ACTACTCCCTCCGTTCCATAA 57.607 47.619 0.00 0.00 0.00 1.90
479 480 3.749954 GCTACTACTCCCTCCGTTCCATA 60.750 52.174 0.00 0.00 0.00 2.74
480 481 2.946785 CTACTACTCCCTCCGTTCCAT 58.053 52.381 0.00 0.00 0.00 3.41
481 482 1.684248 GCTACTACTCCCTCCGTTCCA 60.684 57.143 0.00 0.00 0.00 3.53
482 483 1.031235 GCTACTACTCCCTCCGTTCC 58.969 60.000 0.00 0.00 0.00 3.62
483 484 2.055684 AGCTACTACTCCCTCCGTTC 57.944 55.000 0.00 0.00 0.00 3.95
484 485 2.749132 GCTAGCTACTACTCCCTCCGTT 60.749 54.545 7.70 0.00 0.00 4.44
485 486 1.202794 GCTAGCTACTACTCCCTCCGT 60.203 57.143 7.70 0.00 0.00 4.69
486 487 1.525941 GCTAGCTACTACTCCCTCCG 58.474 60.000 7.70 0.00 0.00 4.63
487 488 1.145325 TGGCTAGCTACTACTCCCTCC 59.855 57.143 15.72 0.00 0.00 4.30
488 489 2.510613 CTGGCTAGCTACTACTCCCTC 58.489 57.143 15.72 0.00 0.00 4.30
489 490 1.146152 CCTGGCTAGCTACTACTCCCT 59.854 57.143 15.72 0.00 0.00 4.20
490 491 1.623163 CCTGGCTAGCTACTACTCCC 58.377 60.000 15.72 0.00 0.00 4.30
491 492 1.623163 CCCTGGCTAGCTACTACTCC 58.377 60.000 15.72 0.00 0.00 3.85
492 493 1.623163 CCCCTGGCTAGCTACTACTC 58.377 60.000 15.72 0.00 0.00 2.59
493 494 0.470268 GCCCCTGGCTAGCTACTACT 60.470 60.000 15.72 0.00 46.69 2.57
494 495 2.051105 GCCCCTGGCTAGCTACTAC 58.949 63.158 15.72 0.00 46.69 2.73
495 496 4.621269 GCCCCTGGCTAGCTACTA 57.379 61.111 15.72 0.00 46.69 1.82
570 577 6.823689 ACAGTACAATAAACAGTCCCATCATC 59.176 38.462 0.00 0.00 0.00 2.92
590 597 5.244626 GTGGGTGGAGTTAGTTAAGACAGTA 59.755 44.000 0.00 0.00 0.00 2.74
683 690 3.127721 GTCTAGCTGGGCAAGAAATGTTC 59.872 47.826 0.00 0.00 0.00 3.18
707 714 3.241868 CGAACACCGATCGTTTGGTAATC 60.242 47.826 15.09 6.17 37.55 1.75
710 717 1.669502 CCGAACACCGATCGTTTGGTA 60.670 52.381 15.09 0.00 41.32 3.25
733 740 5.278169 GCGGCTTCATTAAACTGATGATGAT 60.278 40.000 0.00 0.00 33.82 2.45
734 741 4.035558 GCGGCTTCATTAAACTGATGATGA 59.964 41.667 0.00 0.00 33.82 2.92
792 807 4.398044 CCGGGTAATGCTAAGTTGACATTT 59.602 41.667 9.60 0.00 35.68 2.32
814 830 1.153349 GAGCACAATCTCCCGGACC 60.153 63.158 0.73 0.00 0.00 4.46
822 838 1.848388 TGATCATGGGGAGCACAATCT 59.152 47.619 0.00 0.00 36.91 2.40
839 855 7.446625 AACAATAGTTTTCTCAGCAGAACTGAT 59.553 33.333 5.97 0.00 44.50 2.90
840 856 6.767902 AACAATAGTTTTCTCAGCAGAACTGA 59.232 34.615 5.97 0.00 43.82 3.41
866 882 0.168128 CAAGGAATGTCGTTTCCCGC 59.832 55.000 9.78 0.00 45.32 6.13
940 978 0.396435 TGTCGTGAGCTTGGGTGATT 59.604 50.000 0.00 0.00 0.00 2.57
1097 1146 3.314331 CAGGAGAGCACGGGGTGT 61.314 66.667 0.00 0.00 35.75 4.16
1197 1246 2.257034 GTTTTCTGGTAGTAGCCGACG 58.743 52.381 0.00 0.00 0.00 5.12
1224 1273 2.048597 ACAATGTCTTCGGCGCGA 60.049 55.556 12.10 0.00 0.00 5.87
1239 1288 3.680786 CGCACGGTCTCCCTCACA 61.681 66.667 0.00 0.00 0.00 3.58
1330 1379 0.179156 CCAAGCATCAATCCGTGCAC 60.179 55.000 6.82 6.82 43.63 4.57
1331 1380 1.314534 CCCAAGCATCAATCCGTGCA 61.315 55.000 0.00 0.00 43.63 4.57
1332 1381 1.434696 CCCAAGCATCAATCCGTGC 59.565 57.895 0.00 0.00 41.57 5.34
1333 1382 0.680921 ACCCCAAGCATCAATCCGTG 60.681 55.000 0.00 0.00 0.00 4.94
1334 1383 0.394352 GACCCCAAGCATCAATCCGT 60.394 55.000 0.00 0.00 0.00 4.69
1335 1384 0.107017 AGACCCCAAGCATCAATCCG 60.107 55.000 0.00 0.00 0.00 4.18
1337 1386 3.368739 CCAAAAGACCCCAAGCATCAATC 60.369 47.826 0.00 0.00 0.00 2.67
1339 1388 1.969923 CCAAAAGACCCCAAGCATCAA 59.030 47.619 0.00 0.00 0.00 2.57
1351 1400 3.096489 TGTTGAGCATTGCCAAAAGAC 57.904 42.857 4.70 0.00 0.00 3.01
1354 1403 6.228995 TGATTATTGTTGAGCATTGCCAAAA 58.771 32.000 4.70 2.04 0.00 2.44
1356 1405 5.047164 ACTGATTATTGTTGAGCATTGCCAA 60.047 36.000 4.70 6.73 0.00 4.52
1377 1426 8.853345 GTTGATGCACATAACAGAAAATTACTG 58.147 33.333 9.92 9.92 40.68 2.74
1379 1428 7.537306 ACGTTGATGCACATAACAGAAAATTAC 59.463 33.333 0.00 0.00 0.00 1.89
1384 1702 4.274705 ACACGTTGATGCACATAACAGAAA 59.725 37.500 0.00 0.00 0.00 2.52
1386 1704 3.186205 CACACGTTGATGCACATAACAGA 59.814 43.478 0.00 0.00 0.00 3.41
1387 1705 3.481839 CACACGTTGATGCACATAACAG 58.518 45.455 0.00 0.00 0.00 3.16
1390 1708 1.809547 CCCACACGTTGATGCACATAA 59.190 47.619 0.00 0.00 0.00 1.90
1415 1735 1.070821 AGACGTGCACACATGATTCG 58.929 50.000 18.64 1.42 36.58 3.34
1417 1737 2.493035 TCAAGACGTGCACACATGATT 58.507 42.857 18.64 0.00 36.58 2.57
1428 1748 4.621068 AATAACCATGCATCAAGACGTG 57.379 40.909 0.00 0.00 0.00 4.49
1429 1749 6.767902 AGATAAATAACCATGCATCAAGACGT 59.232 34.615 0.00 0.00 0.00 4.34
1432 1752 9.276590 CTGTAGATAAATAACCATGCATCAAGA 57.723 33.333 0.00 0.00 0.00 3.02
1435 1755 6.942005 CCCTGTAGATAAATAACCATGCATCA 59.058 38.462 0.00 0.00 0.00 3.07
1436 1756 6.942576 ACCCTGTAGATAAATAACCATGCATC 59.057 38.462 0.00 0.00 0.00 3.91
1437 1757 6.852404 ACCCTGTAGATAAATAACCATGCAT 58.148 36.000 0.00 0.00 0.00 3.96
1438 1758 6.260700 ACCCTGTAGATAAATAACCATGCA 57.739 37.500 0.00 0.00 0.00 3.96
1439 1759 6.515035 GCAACCCTGTAGATAAATAACCATGC 60.515 42.308 0.00 0.00 0.00 4.06
1440 1760 6.293407 CGCAACCCTGTAGATAAATAACCATG 60.293 42.308 0.00 0.00 0.00 3.66
1441 1761 5.763204 CGCAACCCTGTAGATAAATAACCAT 59.237 40.000 0.00 0.00 0.00 3.55
1442 1762 5.104859 TCGCAACCCTGTAGATAAATAACCA 60.105 40.000 0.00 0.00 0.00 3.67
1443 1763 5.235831 GTCGCAACCCTGTAGATAAATAACC 59.764 44.000 0.00 0.00 0.00 2.85
1448 1768 2.883574 CGTCGCAACCCTGTAGATAAA 58.116 47.619 0.00 0.00 0.00 1.40
1482 1802 3.066190 CTAGGGTCGGCCACGTCA 61.066 66.667 9.07 0.00 41.85 4.35
1486 1806 4.840005 GCTGCTAGGGTCGGCCAC 62.840 72.222 9.07 0.00 36.17 5.01
1662 1985 2.416547 CGGCATGTCAAAGTAGACCTTG 59.583 50.000 0.00 0.00 37.73 3.61
1983 2306 2.570302 GTCTAGCTTGTTGGGGGTCTTA 59.430 50.000 0.00 0.00 0.00 2.10
1999 2322 9.275231 CACGTTCTTATAGTACTTGTTGTCTAG 57.725 37.037 0.00 0.00 0.00 2.43
2170 2493 0.107508 CCATCGGCACTGGTCTTGAT 60.108 55.000 0.00 0.00 0.00 2.57
2339 2662 8.877864 ATCAGGACCAGTAAATCAATTTAACA 57.122 30.769 0.00 0.00 34.36 2.41
2405 2729 5.105513 TCAAACCCAAGGAAAAGACAAGAAC 60.106 40.000 0.00 0.00 0.00 3.01
2454 2780 9.160496 TGCAAACAACTTTCATAAGAAAAATGT 57.840 25.926 5.44 5.44 42.78 2.71
2602 2932 2.031245 TGTTGCAACGCATGGACTTTAG 60.031 45.455 23.79 0.00 38.76 1.85
2606 2936 1.518056 CCTGTTGCAACGCATGGACT 61.518 55.000 23.79 0.00 38.76 3.85
2608 2938 1.228094 TCCTGTTGCAACGCATGGA 60.228 52.632 23.79 22.37 38.76 3.41
2614 2944 0.518636 CATGGTCTCCTGTTGCAACG 59.481 55.000 23.79 17.58 0.00 4.10
2622 2952 5.762218 GGAGTATGATTTTCATGGTCTCCTG 59.238 44.000 19.20 0.00 41.51 3.86
2630 2960 6.777091 TGGGTTATGGGAGTATGATTTTCATG 59.223 38.462 0.30 0.00 37.70 3.07
2632 2962 6.334378 TGGGTTATGGGAGTATGATTTTCA 57.666 37.500 0.00 0.00 0.00 2.69
2633 2963 7.287696 ACATTGGGTTATGGGAGTATGATTTTC 59.712 37.037 0.00 0.00 0.00 2.29
2641 2971 4.367166 TGAGACATTGGGTTATGGGAGTA 58.633 43.478 0.00 0.00 0.00 2.59
2981 3311 5.278512 GGAGGATTTCAAGGAGTTTGTTGAC 60.279 44.000 0.00 0.00 38.01 3.18
2982 3312 4.827284 GGAGGATTTCAAGGAGTTTGTTGA 59.173 41.667 0.00 0.00 38.01 3.18
2983 3313 4.584325 TGGAGGATTTCAAGGAGTTTGTTG 59.416 41.667 0.00 0.00 38.01 3.33
2984 3314 4.584743 GTGGAGGATTTCAAGGAGTTTGTT 59.415 41.667 0.00 0.00 38.01 2.83
2985 3315 4.145052 GTGGAGGATTTCAAGGAGTTTGT 58.855 43.478 0.00 0.00 38.01 2.83
2986 3316 3.189287 CGTGGAGGATTTCAAGGAGTTTG 59.811 47.826 0.00 0.00 38.17 2.93
2987 3317 3.181443 ACGTGGAGGATTTCAAGGAGTTT 60.181 43.478 0.00 0.00 0.00 2.66
2988 3318 2.372172 ACGTGGAGGATTTCAAGGAGTT 59.628 45.455 0.00 0.00 0.00 3.01
2989 3319 1.978580 ACGTGGAGGATTTCAAGGAGT 59.021 47.619 0.00 0.00 0.00 3.85
2990 3320 2.744202 CAACGTGGAGGATTTCAAGGAG 59.256 50.000 0.00 0.00 0.00 3.69
2991 3321 2.778299 CAACGTGGAGGATTTCAAGGA 58.222 47.619 0.00 0.00 0.00 3.36
2992 3322 1.200020 GCAACGTGGAGGATTTCAAGG 59.800 52.381 0.00 0.00 0.00 3.61
2993 3323 1.200020 GGCAACGTGGAGGATTTCAAG 59.800 52.381 0.00 0.00 0.00 3.02
2994 3324 1.243902 GGCAACGTGGAGGATTTCAA 58.756 50.000 0.00 0.00 0.00 2.69
2995 3325 0.109532 TGGCAACGTGGAGGATTTCA 59.890 50.000 0.00 0.00 42.51 2.69
2996 3326 0.521735 GTGGCAACGTGGAGGATTTC 59.478 55.000 0.00 0.00 42.51 2.17
2997 3327 0.179004 TGTGGCAACGTGGAGGATTT 60.179 50.000 0.00 0.00 42.51 2.17
2998 3328 0.038166 ATGTGGCAACGTGGAGGATT 59.962 50.000 0.00 0.00 42.51 3.01
2999 3329 0.677731 CATGTGGCAACGTGGAGGAT 60.678 55.000 5.44 0.00 39.29 3.24
3000 3330 1.302431 CATGTGGCAACGTGGAGGA 60.302 57.895 5.44 0.00 39.29 3.71
3001 3331 0.888736 TTCATGTGGCAACGTGGAGG 60.889 55.000 13.59 0.00 42.61 4.30
3002 3332 0.950836 TTTCATGTGGCAACGTGGAG 59.049 50.000 13.59 0.00 42.61 3.86
3003 3333 1.393603 TTTTCATGTGGCAACGTGGA 58.606 45.000 13.59 1.21 42.61 4.02
3004 3334 1.857837 GTTTTTCATGTGGCAACGTGG 59.142 47.619 13.59 0.00 42.61 4.94
3005 3335 2.534298 TGTTTTTCATGTGGCAACGTG 58.466 42.857 7.15 7.15 43.55 4.49
3006 3336 2.926838 GTTGTTTTTCATGTGGCAACGT 59.073 40.909 0.00 0.00 42.51 3.99
3007 3337 2.926200 TGTTGTTTTTCATGTGGCAACG 59.074 40.909 0.00 0.00 39.02 4.10
3008 3338 6.595772 TTATGTTGTTTTTCATGTGGCAAC 57.404 33.333 0.00 0.00 37.36 4.17
3009 3339 7.615582 TTTTATGTTGTTTTTCATGTGGCAA 57.384 28.000 0.00 0.00 0.00 4.52
3010 3340 7.615582 TTTTTATGTTGTTTTTCATGTGGCA 57.384 28.000 0.00 0.00 0.00 4.92
3021 3351 9.102757 TGTGCAACACATATTTTTATGTTGTTT 57.897 25.926 15.18 0.00 45.67 2.83
3022 3352 8.654230 TGTGCAACACATATTTTTATGTTGTT 57.346 26.923 15.18 9.17 45.67 2.83
3040 3370 7.698836 ATCTAGTTTCATGTTTTTGTGCAAC 57.301 32.000 0.00 0.00 37.35 4.17
3041 3371 8.845227 TCTATCTAGTTTCATGTTTTTGTGCAA 58.155 29.630 0.00 0.00 0.00 4.08
3042 3372 8.389779 TCTATCTAGTTTCATGTTTTTGTGCA 57.610 30.769 0.00 0.00 0.00 4.57
3043 3373 9.846248 AATCTATCTAGTTTCATGTTTTTGTGC 57.154 29.630 0.00 0.00 0.00 4.57
3051 3381 9.751542 CCTTACGAAATCTATCTAGTTTCATGT 57.248 33.333 0.00 0.00 32.75 3.21
3052 3382 9.197694 CCCTTACGAAATCTATCTAGTTTCATG 57.802 37.037 0.00 0.00 32.75 3.07
3053 3383 8.925338 ACCCTTACGAAATCTATCTAGTTTCAT 58.075 33.333 0.00 0.00 32.75 2.57
3054 3384 8.302515 ACCCTTACGAAATCTATCTAGTTTCA 57.697 34.615 0.00 0.00 32.75 2.69
3058 3388 9.584008 TCAATACCCTTACGAAATCTATCTAGT 57.416 33.333 0.00 0.00 0.00 2.57
3061 3391 8.368668 CCTTCAATACCCTTACGAAATCTATCT 58.631 37.037 0.00 0.00 0.00 1.98
3062 3392 8.148999 ACCTTCAATACCCTTACGAAATCTATC 58.851 37.037 0.00 0.00 0.00 2.08
3063 3393 7.931948 CACCTTCAATACCCTTACGAAATCTAT 59.068 37.037 0.00 0.00 0.00 1.98
3064 3394 7.093201 ACACCTTCAATACCCTTACGAAATCTA 60.093 37.037 0.00 0.00 0.00 1.98
3065 3395 6.113411 CACCTTCAATACCCTTACGAAATCT 58.887 40.000 0.00 0.00 0.00 2.40
3066 3396 5.878669 ACACCTTCAATACCCTTACGAAATC 59.121 40.000 0.00 0.00 0.00 2.17
3067 3397 5.646360 CACACCTTCAATACCCTTACGAAAT 59.354 40.000 0.00 0.00 0.00 2.17
3068 3398 4.998672 CACACCTTCAATACCCTTACGAAA 59.001 41.667 0.00 0.00 0.00 3.46
3069 3399 4.040706 ACACACCTTCAATACCCTTACGAA 59.959 41.667 0.00 0.00 0.00 3.85
3070 3400 3.579586 ACACACCTTCAATACCCTTACGA 59.420 43.478 0.00 0.00 0.00 3.43
3071 3401 3.682858 CACACACCTTCAATACCCTTACG 59.317 47.826 0.00 0.00 0.00 3.18
3072 3402 3.439129 GCACACACCTTCAATACCCTTAC 59.561 47.826 0.00 0.00 0.00 2.34
3073 3403 3.073209 TGCACACACCTTCAATACCCTTA 59.927 43.478 0.00 0.00 0.00 2.69
3074 3404 2.158534 TGCACACACCTTCAATACCCTT 60.159 45.455 0.00 0.00 0.00 3.95
3075 3405 1.423541 TGCACACACCTTCAATACCCT 59.576 47.619 0.00 0.00 0.00 4.34
3076 3406 1.904287 TGCACACACCTTCAATACCC 58.096 50.000 0.00 0.00 0.00 3.69
3077 3407 3.836949 CATTGCACACACCTTCAATACC 58.163 45.455 0.00 0.00 0.00 2.73
3078 3408 3.244976 GCATTGCACACACCTTCAATAC 58.755 45.455 3.15 0.00 0.00 1.89
3079 3409 2.230992 GGCATTGCACACACCTTCAATA 59.769 45.455 11.39 0.00 0.00 1.90
3080 3410 1.001181 GGCATTGCACACACCTTCAAT 59.999 47.619 11.39 0.00 0.00 2.57
3081 3411 0.388659 GGCATTGCACACACCTTCAA 59.611 50.000 11.39 0.00 0.00 2.69
3082 3412 1.462731 GGGCATTGCACACACCTTCA 61.463 55.000 11.39 0.00 0.00 3.02
3083 3413 1.290009 GGGCATTGCACACACCTTC 59.710 57.895 11.39 0.00 0.00 3.46
3084 3414 1.047596 TTGGGCATTGCACACACCTT 61.048 50.000 14.37 0.00 43.74 3.50
3085 3415 1.047596 TTTGGGCATTGCACACACCT 61.048 50.000 14.37 0.00 43.74 4.00
3086 3416 0.179062 TTTTGGGCATTGCACACACC 60.179 50.000 14.37 3.35 43.74 4.16
3087 3417 1.661341 TTTTTGGGCATTGCACACAC 58.339 45.000 14.37 0.00 43.74 3.82
3105 3435 9.698309 CTCATAGGTTAGTCACGATTCATATTT 57.302 33.333 0.00 0.00 0.00 1.40
3106 3436 8.307483 CCTCATAGGTTAGTCACGATTCATATT 58.693 37.037 0.00 0.00 0.00 1.28
3107 3437 7.831753 CCTCATAGGTTAGTCACGATTCATAT 58.168 38.462 0.00 0.00 0.00 1.78
3108 3438 7.215719 CCTCATAGGTTAGTCACGATTCATA 57.784 40.000 0.00 0.00 0.00 2.15
3109 3439 6.090483 CCTCATAGGTTAGTCACGATTCAT 57.910 41.667 0.00 0.00 0.00 2.57
3110 3440 5.515797 CCTCATAGGTTAGTCACGATTCA 57.484 43.478 0.00 0.00 0.00 2.57
3124 3454 5.010112 CACTACACCATCAGTACCTCATAGG 59.990 48.000 0.00 0.00 42.49 2.57
3125 3455 5.010112 CCACTACACCATCAGTACCTCATAG 59.990 48.000 0.00 0.00 0.00 2.23
3126 3456 4.893524 CCACTACACCATCAGTACCTCATA 59.106 45.833 0.00 0.00 0.00 2.15
3127 3457 3.706594 CCACTACACCATCAGTACCTCAT 59.293 47.826 0.00 0.00 0.00 2.90
3128 3458 3.096852 CCACTACACCATCAGTACCTCA 58.903 50.000 0.00 0.00 0.00 3.86
3129 3459 3.362706 TCCACTACACCATCAGTACCTC 58.637 50.000 0.00 0.00 0.00 3.85
3130 3460 3.468071 TCCACTACACCATCAGTACCT 57.532 47.619 0.00 0.00 0.00 3.08
3131 3461 4.504858 CTTTCCACTACACCATCAGTACC 58.495 47.826 0.00 0.00 0.00 3.34
3132 3462 3.933332 GCTTTCCACTACACCATCAGTAC 59.067 47.826 0.00 0.00 0.00 2.73
3133 3463 3.580895 TGCTTTCCACTACACCATCAGTA 59.419 43.478 0.00 0.00 0.00 2.74
3134 3464 2.371841 TGCTTTCCACTACACCATCAGT 59.628 45.455 0.00 0.00 0.00 3.41
3135 3465 3.057969 TGCTTTCCACTACACCATCAG 57.942 47.619 0.00 0.00 0.00 2.90
3136 3466 3.346315 CATGCTTTCCACTACACCATCA 58.654 45.455 0.00 0.00 0.00 3.07
3137 3467 2.684881 CCATGCTTTCCACTACACCATC 59.315 50.000 0.00 0.00 0.00 3.51
3138 3468 2.308570 TCCATGCTTTCCACTACACCAT 59.691 45.455 0.00 0.00 0.00 3.55
3139 3469 1.702401 TCCATGCTTTCCACTACACCA 59.298 47.619 0.00 0.00 0.00 4.17
3140 3470 2.489938 TCCATGCTTTCCACTACACC 57.510 50.000 0.00 0.00 0.00 4.16
3141 3471 5.163513 CAAATTCCATGCTTTCCACTACAC 58.836 41.667 0.00 0.00 0.00 2.90
3142 3472 4.220382 CCAAATTCCATGCTTTCCACTACA 59.780 41.667 0.00 0.00 0.00 2.74
3143 3473 4.462483 TCCAAATTCCATGCTTTCCACTAC 59.538 41.667 0.00 0.00 0.00 2.73
3144 3474 4.671831 TCCAAATTCCATGCTTTCCACTA 58.328 39.130 0.00 0.00 0.00 2.74
3145 3475 3.509442 TCCAAATTCCATGCTTTCCACT 58.491 40.909 0.00 0.00 0.00 4.00
3146 3476 3.959535 TCCAAATTCCATGCTTTCCAC 57.040 42.857 0.00 0.00 0.00 4.02
3147 3477 5.502089 AAATCCAAATTCCATGCTTTCCA 57.498 34.783 0.00 0.00 0.00 3.53
3148 3478 6.349528 CCAAAAATCCAAATTCCATGCTTTCC 60.350 38.462 0.00 0.00 0.00 3.13
3149 3479 6.207221 ACCAAAAATCCAAATTCCATGCTTTC 59.793 34.615 0.00 0.00 0.00 2.62
3150 3480 6.069994 ACCAAAAATCCAAATTCCATGCTTT 58.930 32.000 0.00 0.00 0.00 3.51
3151 3481 5.633117 ACCAAAAATCCAAATTCCATGCTT 58.367 33.333 0.00 0.00 0.00 3.91
3152 3482 5.245584 ACCAAAAATCCAAATTCCATGCT 57.754 34.783 0.00 0.00 0.00 3.79
3153 3483 5.472820 TCAACCAAAAATCCAAATTCCATGC 59.527 36.000 0.00 0.00 0.00 4.06
3154 3484 7.175293 ACATCAACCAAAAATCCAAATTCCATG 59.825 33.333 0.00 0.00 0.00 3.66
3155 3485 7.232910 ACATCAACCAAAAATCCAAATTCCAT 58.767 30.769 0.00 0.00 0.00 3.41
3156 3486 6.599445 ACATCAACCAAAAATCCAAATTCCA 58.401 32.000 0.00 0.00 0.00 3.53
3157 3487 7.509141 AACATCAACCAAAAATCCAAATTCC 57.491 32.000 0.00 0.00 0.00 3.01
3163 3493 9.401058 ACAATTTAAACATCAACCAAAAATCCA 57.599 25.926 0.00 0.00 0.00 3.41
3170 3500 9.110502 GGGTAAAACAATTTAAACATCAACCAA 57.889 29.630 0.00 0.00 32.98 3.67
3171 3501 7.438459 CGGGTAAAACAATTTAAACATCAACCA 59.562 33.333 0.00 0.00 32.98 3.67
3172 3502 7.438757 ACGGGTAAAACAATTTAAACATCAACC 59.561 33.333 0.00 0.00 32.98 3.77
3173 3503 8.355272 ACGGGTAAAACAATTTAAACATCAAC 57.645 30.769 0.00 0.00 32.98 3.18
3174 3504 7.652507 GGACGGGTAAAACAATTTAAACATCAA 59.347 33.333 0.00 0.00 32.98 2.57
3175 3505 7.014422 AGGACGGGTAAAACAATTTAAACATCA 59.986 33.333 0.00 0.00 32.98 3.07
3176 3506 7.327518 CAGGACGGGTAAAACAATTTAAACATC 59.672 37.037 0.00 0.00 32.98 3.06
3177 3507 7.014422 TCAGGACGGGTAAAACAATTTAAACAT 59.986 33.333 0.00 0.00 32.98 2.71
3178 3508 6.320672 TCAGGACGGGTAAAACAATTTAAACA 59.679 34.615 0.00 0.00 32.98 2.83
3179 3509 6.737118 TCAGGACGGGTAAAACAATTTAAAC 58.263 36.000 0.00 0.00 32.98 2.01
3180 3510 6.956202 TCAGGACGGGTAAAACAATTTAAA 57.044 33.333 0.00 0.00 32.98 1.52
3181 3511 6.956202 TTCAGGACGGGTAAAACAATTTAA 57.044 33.333 0.00 0.00 32.98 1.52
3182 3512 6.956202 TTTCAGGACGGGTAAAACAATTTA 57.044 33.333 0.00 0.00 0.00 1.40
3183 3513 5.855740 TTTCAGGACGGGTAAAACAATTT 57.144 34.783 0.00 0.00 0.00 1.82
3184 3514 5.855740 TTTTCAGGACGGGTAAAACAATT 57.144 34.783 0.00 0.00 0.00 2.32
3185 3515 5.047590 GGATTTTCAGGACGGGTAAAACAAT 60.048 40.000 0.00 0.00 0.00 2.71
3186 3516 4.278919 GGATTTTCAGGACGGGTAAAACAA 59.721 41.667 0.00 0.00 0.00 2.83
3187 3517 3.822167 GGATTTTCAGGACGGGTAAAACA 59.178 43.478 0.00 0.00 0.00 2.83
3188 3518 3.120095 CGGATTTTCAGGACGGGTAAAAC 60.120 47.826 0.00 0.00 0.00 2.43
3189 3519 3.075884 CGGATTTTCAGGACGGGTAAAA 58.924 45.455 0.00 0.00 0.00 1.52
3190 3520 2.616001 CCGGATTTTCAGGACGGGTAAA 60.616 50.000 0.00 0.00 40.79 2.01
3191 3521 1.065998 CCGGATTTTCAGGACGGGTAA 60.066 52.381 0.00 0.00 40.79 2.85
3192 3522 0.538118 CCGGATTTTCAGGACGGGTA 59.462 55.000 0.00 0.00 40.79 3.69
3193 3523 1.298667 CCGGATTTTCAGGACGGGT 59.701 57.895 0.00 0.00 40.79 5.28
3194 3524 4.218722 CCGGATTTTCAGGACGGG 57.781 61.111 0.00 0.00 40.79 5.28
3195 3525 2.112815 GCCCGGATTTTCAGGACGG 61.113 63.158 0.73 0.00 43.89 4.79
3196 3526 2.112815 GGCCCGGATTTTCAGGACG 61.113 63.158 0.73 0.00 33.29 4.79
3197 3527 2.112815 CGGCCCGGATTTTCAGGAC 61.113 63.158 0.73 0.00 33.29 3.85
3198 3528 2.270850 CGGCCCGGATTTTCAGGA 59.729 61.111 0.73 0.00 33.29 3.86
3209 3539 0.320946 TTCTTTTGAGTACCGGCCCG 60.321 55.000 0.00 0.00 0.00 6.13
3210 3540 2.124277 ATTCTTTTGAGTACCGGCCC 57.876 50.000 0.00 0.00 0.00 5.80


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.