Multiple sequence alignment - TraesCS2B01G171500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G171500 chr2B 100.000 5759 0 0 1 5759 144604519 144610277 0.000000e+00 10635
1 TraesCS2B01G171500 chr2B 98.333 120 2 0 5508 5627 144610145 144610026 1.630000e-50 211
2 TraesCS2B01G171500 chr2D 89.838 4438 291 78 1142 5499 93053980 93058337 0.000000e+00 5550
3 TraesCS2B01G171500 chr2D 87.773 1145 73 26 1 1102 93052767 93053887 0.000000e+00 1277
4 TraesCS2B01G171500 chr2D 95.556 135 6 0 5625 5759 93058342 93058476 3.490000e-52 217
5 TraesCS2B01G171500 chr2A 89.610 3513 258 60 2031 5499 90743951 90747400 0.000000e+00 4366
6 TraesCS2B01G171500 chr2A 84.971 1557 126 56 15 1504 90741734 90743249 0.000000e+00 1480
7 TraesCS2B01G171500 chr2A 86.103 331 38 3 1700 2029 90743556 90743879 3.300000e-92 350
8 TraesCS2B01G171500 chr2A 95.763 118 4 1 5509 5626 103139572 103139456 7.620000e-44 189
9 TraesCS2B01G171500 chr2A 84.536 194 24 5 1502 1692 90743328 90743518 2.740000e-43 187
10 TraesCS2B01G171500 chr2A 90.977 133 12 0 5627 5759 90747407 90747539 4.580000e-41 180
11 TraesCS2B01G171500 chr3B 97.479 119 3 0 5508 5626 346682716 346682598 2.720000e-48 204
12 TraesCS2B01G171500 chr3B 95.902 122 5 0 5509 5630 346682598 346682719 1.270000e-46 198
13 TraesCS2B01G171500 chr6A 95.238 126 3 2 5509 5634 543531543 543531421 4.550000e-46 196
14 TraesCS2B01G171500 chr6A 93.182 132 5 4 5495 5626 543531416 543531543 2.120000e-44 191
15 TraesCS2B01G171500 chr1A 95.868 121 4 1 5509 5629 72678769 72678888 1.640000e-45 195
16 TraesCS2B01G171500 chr1A 95.798 119 4 1 5508 5626 72678886 72678769 2.120000e-44 191
17 TraesCS2B01G171500 chr1A 94.958 119 4 1 5508 5626 53467638 53467522 9.850000e-43 185


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G171500 chr2B 144604519 144610277 5758 False 10635.0 10635 100.000000 1 5759 1 chr2B.!!$F1 5758
1 TraesCS2B01G171500 chr2D 93052767 93058476 5709 False 2348.0 5550 91.055667 1 5759 3 chr2D.!!$F1 5758
2 TraesCS2B01G171500 chr2A 90741734 90747539 5805 False 1312.6 4366 87.239400 15 5759 5 chr2A.!!$F1 5744

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
432 467 0.179000 CCGCCCAAGATCTAAGCAGT 59.821 55.000 0.0 0.0 0.00 4.40 F
1120 1191 0.034960 TCTCTCTCTCCACCCACTCG 60.035 60.000 0.0 0.0 0.00 4.18 F
1396 1521 1.201647 GCCACTAGCTCGTTCTGTGTA 59.798 52.381 0.0 0.0 38.99 2.90 F
2067 2388 0.530650 AGCCATCGGAATGTACGCAG 60.531 55.000 0.0 0.0 0.00 5.18 F
2475 2799 0.676736 GGATCTGGGATCGGTGAGAC 59.323 60.000 0.0 0.0 0.00 3.36 F
3802 4146 0.616395 TGGGTCTCCGTCTGCCAATA 60.616 55.000 0.0 0.0 35.24 1.90 F
3803 4147 0.759346 GGGTCTCCGTCTGCCAATAT 59.241 55.000 0.0 0.0 0.00 1.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1326 1450 0.107654 ACAGGCTTATCGAACTGCCC 60.108 55.0 18.17 3.90 45.94 5.36 R
2007 2258 0.320421 GTCGCCTTGCCTAGTGACAA 60.320 55.0 5.95 0.00 31.28 3.18 R
2302 2626 0.391130 GTGGTGGCGACATGCTAAGA 60.391 55.0 0.00 0.00 46.14 2.10 R
2969 3310 1.113788 AAGTGTGGCATGTGCAAAGT 58.886 45.0 7.36 0.00 44.36 2.66 R
4221 4565 0.106167 TACTCCGAGCCAGCCTGTAT 60.106 55.0 0.00 0.00 0.00 2.29 R
4687 5044 0.396811 CTTGTCCCGTCCACTTCCTT 59.603 55.0 0.00 0.00 0.00 3.36 R
5384 5771 0.459899 ATGAGATTCGCTACGTGGCA 59.540 50.0 24.15 5.47 0.00 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
111 112 9.395707 CATAACTACTCCGTATGAACTATTGAC 57.604 37.037 0.00 0.00 0.00 3.18
153 181 5.693769 ATACACAACTAATAGCACTGGGT 57.306 39.130 0.00 0.00 0.00 4.51
175 203 7.156673 GGGTCAGAACTATTGTACAACTACAA 58.843 38.462 11.22 0.00 45.06 2.41
178 206 9.257651 GTCAGAACTATTGTACAACTACAACTT 57.742 33.333 11.22 0.00 44.03 2.66
222 250 6.458232 ACTGCAAAAAGTACAACATTGGTA 57.542 33.333 0.00 0.00 0.00 3.25
249 277 1.442769 GATTCTTCGTGGAAGCAGCA 58.557 50.000 0.00 0.00 39.29 4.41
288 316 5.452078 TGATTAATCGAATCCCAATTGCC 57.548 39.130 10.80 0.00 43.04 4.52
300 328 6.824305 ATCCCAATTGCCTAAATTAGATCG 57.176 37.500 0.83 0.00 36.28 3.69
320 351 7.228590 AGATCGTTCTAGCTTAGAATCTACCT 58.771 38.462 0.00 0.00 45.63 3.08
342 373 1.536766 CACAAAGCAAATCTGAGGCGA 59.463 47.619 0.00 0.00 0.00 5.54
362 393 4.932105 GGCCTTGCAACACCCCCA 62.932 66.667 0.00 0.00 0.00 4.96
364 395 3.137687 CCTTGCAACACCCCCAAC 58.862 61.111 0.00 0.00 0.00 3.77
366 397 2.835431 TTGCAACACCCCCAACCG 60.835 61.111 0.00 0.00 0.00 4.44
367 398 3.360423 TTGCAACACCCCCAACCGA 62.360 57.895 0.00 0.00 0.00 4.69
369 400 1.906333 GCAACACCCCCAACCGAAT 60.906 57.895 0.00 0.00 0.00 3.34
370 401 1.468506 GCAACACCCCCAACCGAATT 61.469 55.000 0.00 0.00 0.00 2.17
371 402 1.912417 CAACACCCCCAACCGAATTA 58.088 50.000 0.00 0.00 0.00 1.40
373 404 2.829120 CAACACCCCCAACCGAATTAAT 59.171 45.455 0.00 0.00 0.00 1.40
375 406 3.093814 ACACCCCCAACCGAATTAATTC 58.906 45.455 16.79 16.79 0.00 2.17
376 407 2.429250 CACCCCCAACCGAATTAATTCC 59.571 50.000 20.01 5.36 33.28 3.01
377 408 2.043252 ACCCCCAACCGAATTAATTCCA 59.957 45.455 20.01 0.00 33.28 3.53
378 409 2.429250 CCCCCAACCGAATTAATTCCAC 59.571 50.000 20.01 0.00 33.28 4.02
379 410 2.429250 CCCCAACCGAATTAATTCCACC 59.571 50.000 20.01 0.00 33.28 4.61
380 411 3.093057 CCCAACCGAATTAATTCCACCA 58.907 45.455 20.01 0.00 33.28 4.17
381 412 3.130340 CCCAACCGAATTAATTCCACCAG 59.870 47.826 20.01 7.62 33.28 4.00
382 413 4.013728 CCAACCGAATTAATTCCACCAGA 58.986 43.478 20.01 0.00 33.28 3.86
383 414 4.644685 CCAACCGAATTAATTCCACCAGAT 59.355 41.667 20.01 0.00 33.28 2.90
385 416 6.320164 CCAACCGAATTAATTCCACCAGATAA 59.680 38.462 20.01 0.00 33.28 1.75
386 417 6.937436 ACCGAATTAATTCCACCAGATAAC 57.063 37.500 20.01 0.00 33.28 1.89
387 418 5.526111 ACCGAATTAATTCCACCAGATAACG 59.474 40.000 20.01 6.58 33.28 3.18
432 467 0.179000 CCGCCCAAGATCTAAGCAGT 59.821 55.000 0.00 0.00 0.00 4.40
437 472 1.839994 CCAAGATCTAAGCAGTCCCCA 59.160 52.381 0.00 0.00 0.00 4.96
438 473 2.158842 CCAAGATCTAAGCAGTCCCCAG 60.159 54.545 0.00 0.00 0.00 4.45
453 488 2.501128 CAGACGGGATCCACGCAT 59.499 61.111 15.23 4.41 34.00 4.73
485 523 1.745115 GCAACATCTACCAGCGGCA 60.745 57.895 1.45 0.00 0.00 5.69
504 542 2.045045 CGGCATCAGCAAAGGGGA 60.045 61.111 0.00 0.00 44.61 4.81
505 543 2.117156 CGGCATCAGCAAAGGGGAG 61.117 63.158 0.00 0.00 44.61 4.30
728 783 0.670546 CTCTTCGCTTTTCGCCTCCA 60.671 55.000 0.00 0.00 38.27 3.86
729 784 0.250124 TCTTCGCTTTTCGCCTCCAA 60.250 50.000 0.00 0.00 38.27 3.53
760 816 3.270169 GGGTTTAGGGTTTTATGAGGGGA 59.730 47.826 0.00 0.00 0.00 4.81
820 876 0.548510 GCCAGCCCTAGAATGTTCCT 59.451 55.000 0.00 0.00 0.00 3.36
908 964 3.039134 CCCACAAGGCGTTCCAAC 58.961 61.111 0.00 0.00 33.74 3.77
942 1000 2.509336 CCGCGAGCGAACTCCATT 60.509 61.111 19.72 0.00 40.03 3.16
943 1001 2.517450 CCGCGAGCGAACTCCATTC 61.517 63.158 19.72 0.00 40.03 2.67
944 1002 2.517450 CGCGAGCGAACTCCATTCC 61.517 63.158 12.58 0.00 40.03 3.01
945 1003 2.174319 GCGAGCGAACTCCATTCCC 61.174 63.158 0.00 0.00 40.03 3.97
946 1004 1.517832 CGAGCGAACTCCATTCCCT 59.482 57.895 0.00 0.00 40.03 4.20
959 1020 3.837731 TCCATTCCCTTTCCAATTTCCAC 59.162 43.478 0.00 0.00 0.00 4.02
1007 1078 2.130426 GGAGCTGAGAGATGGCGGA 61.130 63.158 0.00 0.00 0.00 5.54
1044 1115 2.428085 GCGGGAGGAGGAAGAGGAC 61.428 68.421 0.00 0.00 0.00 3.85
1083 1154 3.455910 TGGATCCGTCCTTCTTCATGAAT 59.544 43.478 8.96 0.00 45.32 2.57
1106 1177 2.937433 GCAAGTAGGGGTTTGCTCTCTC 60.937 54.545 2.22 0.00 37.44 3.20
1110 1181 1.567357 AGGGGTTTGCTCTCTCTCTC 58.433 55.000 0.00 0.00 0.00 3.20
1111 1182 0.539518 GGGGTTTGCTCTCTCTCTCC 59.460 60.000 0.00 0.00 0.00 3.71
1114 1185 1.066502 GGTTTGCTCTCTCTCTCCACC 60.067 57.143 0.00 0.00 0.00 4.61
1116 1187 0.115152 TTGCTCTCTCTCTCCACCCA 59.885 55.000 0.00 0.00 0.00 4.51
1120 1191 0.034960 TCTCTCTCTCCACCCACTCG 60.035 60.000 0.00 0.00 0.00 4.18
1135 1206 2.224450 CCACTCGGGGTTTACTGTTCTT 60.224 50.000 0.00 0.00 0.00 2.52
1136 1207 3.007182 CCACTCGGGGTTTACTGTTCTTA 59.993 47.826 0.00 0.00 0.00 2.10
1138 1209 4.630069 CACTCGGGGTTTACTGTTCTTATG 59.370 45.833 0.00 0.00 0.00 1.90
1139 1210 4.285260 ACTCGGGGTTTACTGTTCTTATGT 59.715 41.667 0.00 0.00 0.00 2.29
1140 1211 5.481473 ACTCGGGGTTTACTGTTCTTATGTA 59.519 40.000 0.00 0.00 0.00 2.29
1310 1434 3.573598 TGCCAATGTTGCAAATTACTCG 58.426 40.909 0.00 0.00 35.40 4.18
1348 1472 1.202076 GCAGTTCGATAAGCCTGTTGC 60.202 52.381 0.00 0.00 41.71 4.17
1396 1521 1.201647 GCCACTAGCTCGTTCTGTGTA 59.798 52.381 0.00 0.00 38.99 2.90
1504 1637 3.399330 TGTGCTGCTCAAGTTAGTTACC 58.601 45.455 1.33 0.00 0.00 2.85
1505 1638 2.412089 GTGCTGCTCAAGTTAGTTACCG 59.588 50.000 0.00 0.00 0.00 4.02
1506 1639 2.297880 TGCTGCTCAAGTTAGTTACCGA 59.702 45.455 0.00 0.00 0.00 4.69
1548 1765 3.067180 ACAAGTTGTTCAATCCAGCACTG 59.933 43.478 1.64 0.00 0.00 3.66
1549 1766 2.936202 AGTTGTTCAATCCAGCACTGT 58.064 42.857 0.00 0.00 0.00 3.55
1550 1767 3.290710 AGTTGTTCAATCCAGCACTGTT 58.709 40.909 0.00 0.00 0.00 3.16
1551 1768 3.701040 AGTTGTTCAATCCAGCACTGTTT 59.299 39.130 0.00 0.00 0.00 2.83
1552 1769 3.713858 TGTTCAATCCAGCACTGTTTG 57.286 42.857 0.00 1.28 0.00 2.93
1563 1780 2.857592 CACTGTTTGCATGATAGCCC 57.142 50.000 0.00 0.00 0.00 5.19
1564 1781 2.372264 CACTGTTTGCATGATAGCCCT 58.628 47.619 0.00 0.00 0.00 5.19
1565 1782 2.098607 CACTGTTTGCATGATAGCCCTG 59.901 50.000 0.00 0.00 0.00 4.45
1572 1789 7.003482 TGTTTGCATGATAGCCCTGAATAATA 58.997 34.615 0.00 0.00 0.00 0.98
1583 1800 7.195374 AGCCCTGAATAATACTCAGTGTTAA 57.805 36.000 0.00 0.00 38.96 2.01
1588 1805 9.099454 CCTGAATAATACTCAGTGTTAAGTTCC 57.901 37.037 0.00 0.00 38.96 3.62
1590 1807 9.431887 TGAATAATACTCAGTGTTAAGTTCCAC 57.568 33.333 0.00 0.00 0.00 4.02
1591 1808 8.788325 AATAATACTCAGTGTTAAGTTCCACC 57.212 34.615 0.00 0.00 31.88 4.61
1594 1811 3.454812 ACTCAGTGTTAAGTTCCACCACT 59.545 43.478 2.80 0.00 36.85 4.00
1626 1844 3.965379 TTGGTCAATGAATTGCAGCAT 57.035 38.095 0.00 0.00 37.68 3.79
1632 1850 5.450826 GGTCAATGAATTGCAGCATGTATGA 60.451 40.000 0.00 0.00 39.31 2.15
1642 1860 2.292569 CAGCATGTATGATTCAGGCACC 59.707 50.000 11.04 0.00 43.58 5.01
1701 1951 7.064134 TGCTGATCACAAGTTTAATACCGTAAG 59.936 37.037 0.00 0.00 0.00 2.34
1720 1971 6.201044 CCGTAAGAACAGCCTATCAATTGTAG 59.799 42.308 5.13 6.70 43.02 2.74
1791 2042 4.335315 TGTTTCGAGCATGGAAATATGTCC 59.665 41.667 4.79 4.79 44.46 4.02
1908 2159 6.394809 CCACTTTTTACCTTGTCTTGTTTGT 58.605 36.000 0.00 0.00 0.00 2.83
1910 2161 7.087639 CACTTTTTACCTTGTCTTGTTTGTGA 58.912 34.615 0.00 0.00 0.00 3.58
1950 2201 4.411540 AGTTCCATTCTAGTGCATGAGGAT 59.588 41.667 0.00 0.00 0.00 3.24
1997 2248 5.939883 TGATCAAACTAATGAAGGGTCACAG 59.060 40.000 0.00 0.00 36.31 3.66
2005 2256 7.050377 ACTAATGAAGGGTCACAGTCATATTG 58.950 38.462 0.00 0.00 36.31 1.90
2007 2258 3.587061 TGAAGGGTCACAGTCATATTGGT 59.413 43.478 0.00 0.00 0.00 3.67
2019 2270 4.225042 AGTCATATTGGTTGTCACTAGGCA 59.775 41.667 0.00 0.00 0.00 4.75
2029 2280 0.898326 TCACTAGGCAAGGCGACTCA 60.898 55.000 0.00 0.00 42.68 3.41
2044 2365 5.047235 AGGCGACTCACTTTGTATCTACTTT 60.047 40.000 0.00 0.00 32.90 2.66
2053 2374 8.100791 TCACTTTGTATCTACTTTTACAGCCAT 58.899 33.333 0.00 0.00 30.53 4.40
2054 2375 8.391106 CACTTTGTATCTACTTTTACAGCCATC 58.609 37.037 0.00 0.00 30.53 3.51
2057 2378 5.361571 TGTATCTACTTTTACAGCCATCGGA 59.638 40.000 0.00 0.00 0.00 4.55
2067 2388 0.530650 AGCCATCGGAATGTACGCAG 60.531 55.000 0.00 0.00 0.00 5.18
2074 2395 2.933906 TCGGAATGTACGCAGATTTTCC 59.066 45.455 0.00 0.00 0.00 3.13
2083 2404 5.761234 TGTACGCAGATTTTCCTAACAAAGT 59.239 36.000 0.00 0.00 0.00 2.66
2086 2407 6.665465 ACGCAGATTTTCCTAACAAAGTAAC 58.335 36.000 0.00 0.00 0.00 2.50
2116 2437 2.191400 AGTGGTCACAGTGCTATCCAT 58.809 47.619 3.82 0.00 0.00 3.41
2122 2443 1.935873 CACAGTGCTATCCATTGTCCG 59.064 52.381 0.00 0.00 41.80 4.79
2132 2453 3.417069 TCCATTGTCCGTCAGTTGAAT 57.583 42.857 0.00 0.00 0.00 2.57
2133 2454 3.750371 TCCATTGTCCGTCAGTTGAATT 58.250 40.909 0.00 0.00 0.00 2.17
2134 2455 4.141287 TCCATTGTCCGTCAGTTGAATTT 58.859 39.130 0.00 0.00 0.00 1.82
2136 2457 5.068460 TCCATTGTCCGTCAGTTGAATTTTT 59.932 36.000 0.00 0.00 0.00 1.94
2172 2495 3.134458 GCTACACTCAAGTTCTGTTGCT 58.866 45.455 0.00 0.00 0.00 3.91
2173 2496 3.059325 GCTACACTCAAGTTCTGTTGCTG 60.059 47.826 0.00 0.00 0.00 4.41
2195 2518 1.495878 GTGCAGCGAGATATGTGGAG 58.504 55.000 0.00 0.00 0.00 3.86
2208 2531 8.314751 CGAGATATGTGGAGGGTCTTATTTAAT 58.685 37.037 0.00 0.00 0.00 1.40
2241 2564 6.400727 CGTGGTTAATACACTAACTTGTCTGC 60.401 42.308 10.34 0.00 36.71 4.26
2242 2565 6.649557 GTGGTTAATACACTAACTTGTCTGCT 59.350 38.462 6.13 0.00 35.98 4.24
2250 2573 5.594317 ACACTAACTTGTCTGCTTGGATTTT 59.406 36.000 0.00 0.00 0.00 1.82
2260 2583 2.171003 GCTTGGATTTTGGTACAGGCT 58.829 47.619 0.00 0.00 42.39 4.58
2261 2584 3.245087 TGCTTGGATTTTGGTACAGGCTA 60.245 43.478 0.00 0.00 42.39 3.93
2262 2585 3.761752 GCTTGGATTTTGGTACAGGCTAA 59.238 43.478 0.00 0.00 42.39 3.09
2266 2589 4.709397 TGGATTTTGGTACAGGCTAAATGG 59.291 41.667 0.00 0.00 42.39 3.16
2275 2599 2.233271 CAGGCTAAATGGCACCCATAG 58.767 52.381 0.00 0.00 44.40 2.23
2278 2602 3.461831 AGGCTAAATGGCACCCATAGTAA 59.538 43.478 0.00 0.00 44.40 2.24
2295 2619 8.375506 CCCATAGTAAAGAGTGCCAGATATTTA 58.624 37.037 0.00 0.00 0.00 1.40
2331 2655 1.671845 GTCGCCACCACTAACAAACAA 59.328 47.619 0.00 0.00 0.00 2.83
2334 2658 2.292016 CGCCACCACTAACAAACAATCA 59.708 45.455 0.00 0.00 0.00 2.57
2438 2762 0.838122 CCCTGAGACTGTGAAGGGGT 60.838 60.000 10.02 0.00 44.94 4.95
2475 2799 0.676736 GGATCTGGGATCGGTGAGAC 59.323 60.000 0.00 0.00 0.00 3.36
2476 2800 0.676736 GATCTGGGATCGGTGAGACC 59.323 60.000 0.00 0.00 34.05 3.85
2534 2866 8.725405 TTTTGATCTTACAAACACTGACACTA 57.275 30.769 0.00 0.00 39.08 2.74
2536 2868 8.534333 TTGATCTTACAAACACTGACACTATC 57.466 34.615 0.00 0.00 0.00 2.08
2537 2869 7.666623 TGATCTTACAAACACTGACACTATCA 58.333 34.615 0.00 0.00 35.45 2.15
2559 2891 1.138266 GACTTGCTAGGCATTACCGGA 59.862 52.381 9.46 0.00 46.52 5.14
2690 3022 6.718454 AGAATGATTTTGAGACTTCCACATGT 59.282 34.615 0.00 0.00 0.00 3.21
2969 3310 4.817464 TCATTGATCGTGAATGATGCATGA 59.183 37.500 2.46 0.00 35.38 3.07
3133 3474 7.081526 ACTATGTTTCATTGCTCTGACATTC 57.918 36.000 0.00 0.00 0.00 2.67
3153 3494 9.490663 GACATTCGTTGAAATAAAACTATCCAG 57.509 33.333 0.00 0.00 0.00 3.86
3444 3785 7.482169 TTCCATGTCTCTTTGATACTGTAGT 57.518 36.000 0.00 0.00 0.00 2.73
3525 3866 7.066043 ACGAACCAAAGTGTATGTACTTTTTCA 59.934 33.333 14.60 0.00 45.85 2.69
3583 3924 5.468540 TCTTCCCGTCCAAGACATATATG 57.531 43.478 11.29 11.29 32.09 1.78
3590 3931 6.127869 CCCGTCCAAGACATATATGAGTAGAG 60.128 46.154 19.63 3.84 32.09 2.43
3631 3972 5.473066 AAAAAGGTGCAGATAAATGCTGT 57.527 34.783 0.00 0.00 46.63 4.40
3636 3977 3.382546 GGTGCAGATAAATGCTGTCCATT 59.617 43.478 0.00 0.00 46.63 3.16
3721 4062 8.250332 TCGCATTTTATTTCTCCTTGCTTTATT 58.750 29.630 0.00 0.00 0.00 1.40
3730 4071 7.972832 TTCTCCTTGCTTTATTCGTTAAGAA 57.027 32.000 0.00 0.00 43.93 2.52
3743 4084 4.925068 TCGTTAAGAATAACTACTCGCCC 58.075 43.478 0.00 0.00 39.42 6.13
3744 4085 4.398988 TCGTTAAGAATAACTACTCGCCCA 59.601 41.667 0.00 0.00 39.42 5.36
3763 4107 3.127081 CAGTTCTTGGATCATGTTGCG 57.873 47.619 0.00 0.00 0.00 4.85
3780 4124 7.435192 TCATGTTGCGTTGACTAATCTGTATAG 59.565 37.037 0.00 0.00 0.00 1.31
3788 4132 7.222224 CGTTGACTAATCTGTATAGTTTGGGTC 59.778 40.741 9.26 9.26 33.85 4.46
3789 4133 7.973048 TGACTAATCTGTATAGTTTGGGTCT 57.027 36.000 13.59 0.00 33.85 3.85
3790 4134 8.008513 TGACTAATCTGTATAGTTTGGGTCTC 57.991 38.462 13.59 1.14 33.85 3.36
3791 4135 7.069578 TGACTAATCTGTATAGTTTGGGTCTCC 59.930 40.741 13.59 0.00 33.85 3.71
3792 4136 4.939052 ATCTGTATAGTTTGGGTCTCCG 57.061 45.455 0.00 0.00 35.24 4.63
3793 4137 3.705051 TCTGTATAGTTTGGGTCTCCGT 58.295 45.455 0.00 0.00 35.24 4.69
3794 4138 3.698040 TCTGTATAGTTTGGGTCTCCGTC 59.302 47.826 0.00 0.00 35.24 4.79
3796 4140 3.446161 TGTATAGTTTGGGTCTCCGTCTG 59.554 47.826 0.00 0.00 35.24 3.51
3798 4142 1.671379 GTTTGGGTCTCCGTCTGCC 60.671 63.158 0.00 0.00 35.24 4.85
3800 4144 1.701031 TTTGGGTCTCCGTCTGCCAA 61.701 55.000 0.00 0.00 35.24 4.52
3802 4146 0.616395 TGGGTCTCCGTCTGCCAATA 60.616 55.000 0.00 0.00 35.24 1.90
3803 4147 0.759346 GGGTCTCCGTCTGCCAATAT 59.241 55.000 0.00 0.00 0.00 1.28
3804 4148 1.968493 GGGTCTCCGTCTGCCAATATA 59.032 52.381 0.00 0.00 0.00 0.86
3805 4149 2.367567 GGGTCTCCGTCTGCCAATATAA 59.632 50.000 0.00 0.00 0.00 0.98
3806 4150 3.555168 GGGTCTCCGTCTGCCAATATAAG 60.555 52.174 0.00 0.00 0.00 1.73
3807 4151 3.069729 GGTCTCCGTCTGCCAATATAAGT 59.930 47.826 0.00 0.00 0.00 2.24
3808 4152 4.280174 GGTCTCCGTCTGCCAATATAAGTA 59.720 45.833 0.00 0.00 0.00 2.24
3848 4192 9.855021 TTTGAATATCTTTGCTTAAAAGGTAGC 57.145 29.630 0.00 0.00 43.19 3.58
3880 4224 6.825721 ACTCATGGATAAAACTGCCTAAAGAG 59.174 38.462 0.00 0.00 0.00 2.85
3931 4275 2.584835 AGCACTTACAATGGCTCCAA 57.415 45.000 0.00 0.00 28.71 3.53
3970 4314 2.537863 GCTAATGAGCGCTGATCCC 58.462 57.895 18.48 0.00 39.39 3.85
3973 4317 2.141517 CTAATGAGCGCTGATCCCTTG 58.858 52.381 18.48 0.00 0.00 3.61
3978 4322 1.219124 GCGCTGATCCCTTGAGTCA 59.781 57.895 0.00 0.00 0.00 3.41
3982 4326 3.012518 CGCTGATCCCTTGAGTCAAAAT 58.987 45.455 7.06 1.17 0.00 1.82
3986 4330 4.410099 TGATCCCTTGAGTCAAAATTGCT 58.590 39.130 7.06 0.00 0.00 3.91
3991 4335 4.293415 CCTTGAGTCAAAATTGCTCACAC 58.707 43.478 7.06 0.00 39.35 3.82
3998 4342 5.068198 AGTCAAAATTGCTCACACTGTGATT 59.932 36.000 15.86 1.41 41.94 2.57
4003 4347 3.198409 TGCTCACACTGTGATTCACTT 57.802 42.857 15.86 2.36 41.94 3.16
4043 4387 9.565213 AGAGATTTGCTGAAAATTCTAAATTCG 57.435 29.630 0.00 0.00 38.64 3.34
4044 4388 8.693542 AGATTTGCTGAAAATTCTAAATTCGG 57.306 30.769 0.00 0.00 38.64 4.30
4046 4390 4.998979 GCTGAAAATTCTAAATTCGGCG 57.001 40.909 0.00 0.00 43.25 6.46
4047 4391 4.412207 GCTGAAAATTCTAAATTCGGCGT 58.588 39.130 6.85 0.00 43.25 5.68
4048 4392 4.262976 GCTGAAAATTCTAAATTCGGCGTG 59.737 41.667 6.85 0.00 43.25 5.34
4049 4393 5.614923 TGAAAATTCTAAATTCGGCGTGA 57.385 34.783 6.85 0.00 0.00 4.35
4050 4394 5.387279 TGAAAATTCTAAATTCGGCGTGAC 58.613 37.500 6.85 0.00 0.00 3.67
4051 4395 5.049336 TGAAAATTCTAAATTCGGCGTGACA 60.049 36.000 6.85 0.00 0.00 3.58
4052 4396 5.560966 AAATTCTAAATTCGGCGTGACAT 57.439 34.783 6.85 0.00 0.00 3.06
4053 4397 4.536364 ATTCTAAATTCGGCGTGACATG 57.464 40.909 6.85 0.00 0.00 3.21
4054 4398 2.967362 TCTAAATTCGGCGTGACATGT 58.033 42.857 6.85 0.00 0.00 3.21
4055 4399 4.112716 TCTAAATTCGGCGTGACATGTA 57.887 40.909 6.85 0.00 0.00 2.29
4056 4400 3.861113 TCTAAATTCGGCGTGACATGTAC 59.139 43.478 6.85 0.00 0.00 2.90
4098 4442 2.501723 ACCTCTGCCGATTTACAGACAT 59.498 45.455 0.00 0.00 37.99 3.06
4102 4446 2.009051 TGCCGATTTACAGACATGCAG 58.991 47.619 0.00 0.00 0.00 4.41
4119 4463 0.877071 CAGAGTGTCATGTTGCCCAC 59.123 55.000 0.00 0.00 0.00 4.61
4122 4466 0.767375 AGTGTCATGTTGCCCACTCT 59.233 50.000 0.00 0.00 32.97 3.24
4125 4469 2.030805 GTGTCATGTTGCCCACTCTTTC 60.031 50.000 0.00 0.00 0.00 2.62
4136 4480 3.319122 GCCCACTCTTTCATCAGTTTGTT 59.681 43.478 0.00 0.00 0.00 2.83
4142 4486 4.362279 TCTTTCATCAGTTTGTTGCTTGC 58.638 39.130 0.00 0.00 0.00 4.01
4144 4488 3.358707 TCATCAGTTTGTTGCTTGCTG 57.641 42.857 0.00 0.00 0.00 4.41
4192 4536 8.223177 TCATTTTCCTTGTGCAAAAATGATTT 57.777 26.923 23.04 0.00 0.00 2.17
4221 4565 3.070878 TGCGTTCCTGAGCATATGGAATA 59.929 43.478 4.56 0.00 41.23 1.75
4253 4597 6.069331 TGGCTCGGAGTAGTTTAGATTATCT 58.931 40.000 6.90 0.00 0.00 1.98
4307 4651 5.247337 TGACATGTACTTGGTATGGTCAGAA 59.753 40.000 12.86 0.00 0.00 3.02
4351 4696 6.863126 GCAATACAAGAACAACTGCTAACAAT 59.137 34.615 0.00 0.00 0.00 2.71
4358 4703 6.389906 AGAACAACTGCTAACAATAAATGGC 58.610 36.000 0.00 0.00 0.00 4.40
4392 4737 7.182760 TCCTGAGATATTATGTCCGGTTATCT 58.817 38.462 0.00 5.56 33.47 1.98
4394 4739 7.085052 TGAGATATTATGTCCGGTTATCTCG 57.915 40.000 19.60 0.00 44.09 4.04
4404 4752 2.094390 CCGGTTATCTCGTTGTCCTTCA 60.094 50.000 0.00 0.00 0.00 3.02
4405 4753 2.921754 CGGTTATCTCGTTGTCCTTCAC 59.078 50.000 0.00 0.00 0.00 3.18
4410 4758 3.093717 TCTCGTTGTCCTTCACACTTC 57.906 47.619 0.00 0.00 33.41 3.01
4417 4765 5.236478 CGTTGTCCTTCACACTTCTGTAAAT 59.764 40.000 0.00 0.00 33.41 1.40
4423 4771 9.827411 GTCCTTCACACTTCTGTAAATATTTTC 57.173 33.333 5.91 1.70 0.00 2.29
4426 4774 6.530567 TCACACTTCTGTAAATATTTTCGCG 58.469 36.000 5.91 0.00 0.00 5.87
4428 4776 6.461698 CACACTTCTGTAAATATTTTCGCGAC 59.538 38.462 9.15 0.00 0.00 5.19
4463 4811 4.096532 TCATACAAGTGAGGTCTTAGAGCG 59.903 45.833 5.75 0.00 35.00 5.03
4465 4813 3.093057 ACAAGTGAGGTCTTAGAGCGAT 58.907 45.455 5.75 0.00 35.00 4.58
4467 4815 2.303175 AGTGAGGTCTTAGAGCGATCC 58.697 52.381 5.75 0.00 35.00 3.36
4468 4816 1.338655 GTGAGGTCTTAGAGCGATCCC 59.661 57.143 5.75 0.00 35.00 3.85
4469 4817 1.063942 TGAGGTCTTAGAGCGATCCCA 60.064 52.381 5.75 0.00 35.00 4.37
4477 4825 1.813513 AGAGCGATCCCAACACTTTG 58.186 50.000 0.00 0.00 0.00 2.77
4478 4826 1.072331 AGAGCGATCCCAACACTTTGT 59.928 47.619 0.00 0.00 0.00 2.83
4488 4837 3.243401 CCCAACACTTTGTTAGCCACTTC 60.243 47.826 0.00 0.00 38.77 3.01
4492 4841 4.270008 ACACTTTGTTAGCCACTTCTGTT 58.730 39.130 0.00 0.00 0.00 3.16
4500 4849 1.952296 AGCCACTTCTGTTTGCTTCAG 59.048 47.619 0.00 0.00 30.33 3.02
4505 4854 5.278463 GCCACTTCTGTTTGCTTCAGATTTA 60.278 40.000 6.83 0.00 40.83 1.40
4506 4855 6.735694 GCCACTTCTGTTTGCTTCAGATTTAA 60.736 38.462 6.83 0.00 40.83 1.52
4509 4858 7.589221 CACTTCTGTTTGCTTCAGATTTAACTC 59.411 37.037 6.83 0.00 40.83 3.01
4512 4861 6.428159 TCTGTTTGCTTCAGATTTAACTCTCC 59.572 38.462 0.00 0.00 37.07 3.71
4513 4862 6.299141 TGTTTGCTTCAGATTTAACTCTCCT 58.701 36.000 0.00 0.00 0.00 3.69
4517 4866 9.520515 TTTGCTTCAGATTTAACTCTCCTATTT 57.479 29.630 0.00 0.00 0.00 1.40
4522 4871 8.703604 TCAGATTTAACTCTCCTATTTTGTCG 57.296 34.615 0.00 0.00 0.00 4.35
4530 4879 5.221661 ACTCTCCTATTTTGTCGTCCAACTT 60.222 40.000 0.00 0.00 31.20 2.66
4539 4888 5.978934 TTGTCGTCCAACTTACTTTCTTC 57.021 39.130 0.00 0.00 0.00 2.87
4540 4889 5.272283 TGTCGTCCAACTTACTTTCTTCT 57.728 39.130 0.00 0.00 0.00 2.85
4546 4895 7.120138 TCGTCCAACTTACTTTCTTCTTTTGTT 59.880 33.333 0.00 0.00 0.00 2.83
4547 4896 7.218204 CGTCCAACTTACTTTCTTCTTTTGTTG 59.782 37.037 0.00 0.00 34.07 3.33
4558 4911 6.539649 TCTTCTTTTGTTGTATTCTGACCG 57.460 37.500 0.00 0.00 0.00 4.79
4566 4919 4.221924 TGTTGTATTCTGACCGATTCCAGA 59.778 41.667 0.00 0.00 37.61 3.86
4577 4930 5.239306 TGACCGATTCCAGAATTAATGCATC 59.761 40.000 0.00 0.00 0.00 3.91
4583 4936 9.734620 CGATTCCAGAATTAATGCATCTTTTTA 57.265 29.630 0.00 0.00 0.00 1.52
4614 4971 8.723942 ATGATGTGTATTCTCTTAACCAAGAC 57.276 34.615 0.00 0.00 35.82 3.01
4615 4972 7.676004 TGATGTGTATTCTCTTAACCAAGACA 58.324 34.615 0.00 0.00 35.82 3.41
4619 4976 7.656137 TGTGTATTCTCTTAACCAAGACACTTC 59.344 37.037 9.45 0.00 36.33 3.01
4687 5044 3.444034 TGAAAAACGTGGAATGGTTGTCA 59.556 39.130 0.00 0.00 44.28 3.58
4890 5250 5.337894 CCTGAACATGATGTGGTCTCTAGTT 60.338 44.000 0.00 0.00 45.16 2.24
4983 5343 7.928908 TGATTCAGCACAACTTTTAAATGAC 57.071 32.000 8.00 0.00 0.00 3.06
5032 5396 0.736325 AAGAAGCGATTCGGGTCACG 60.736 55.000 7.91 0.00 46.11 4.35
5042 5406 2.733593 GGGTCACGACGTCACAGC 60.734 66.667 17.16 7.65 0.00 4.40
5043 5407 3.097728 GGTCACGACGTCACAGCG 61.098 66.667 17.16 3.99 37.94 5.18
5053 5435 2.735134 GACGTCACAGCGTTTTTCCTAT 59.265 45.455 11.55 0.00 45.79 2.57
5242 5628 0.035820 TTGGCGCCACCTAGGTAAAG 60.036 55.000 32.95 9.61 40.61 1.85
5260 5646 1.042559 AGCACCAAAACCCACACTGG 61.043 55.000 0.00 0.00 37.25 4.00
5268 5654 2.113860 AACCCACACTGGATGAATCG 57.886 50.000 0.00 0.00 40.96 3.34
5301 5687 1.578215 ATCCCTGCCCTGCATTGTCT 61.578 55.000 0.00 0.00 38.13 3.41
5302 5688 1.751927 CCCTGCCCTGCATTGTCTC 60.752 63.158 0.00 0.00 38.13 3.36
5326 5712 1.980772 GCTCCCATGCCAAGTTGCT 60.981 57.895 0.00 0.00 0.00 3.91
5384 5771 1.198759 TTAGCCTGTTCCTCGCCCTT 61.199 55.000 0.00 0.00 0.00 3.95
5402 5789 0.245266 TTGCCACGTAGCGAATCTCA 59.755 50.000 0.59 0.00 34.65 3.27
5430 5817 3.965539 CTCGTCAAGGCCTGCCCTG 62.966 68.421 5.69 0.00 45.62 4.45
5447 5834 2.212110 TGGTCAGCAGAGCAGAGCA 61.212 57.895 6.93 11.36 46.73 4.26
5448 5835 1.448189 GGTCAGCAGAGCAGAGCAG 60.448 63.158 3.13 0.00 41.09 4.24
5449 5836 1.590665 GTCAGCAGAGCAGAGCAGA 59.409 57.895 0.00 0.00 0.00 4.26
5450 5837 0.458889 GTCAGCAGAGCAGAGCAGAG 60.459 60.000 0.00 0.00 0.00 3.35
5451 5838 1.812093 CAGCAGAGCAGAGCAGAGC 60.812 63.158 0.00 0.00 0.00 4.09
5452 5839 1.985662 AGCAGAGCAGAGCAGAGCT 60.986 57.895 0.00 0.00 45.25 4.09
5467 5854 1.294659 GAGCTTGTCACGGAGGCAAG 61.295 60.000 17.00 17.00 41.61 4.01
5499 5886 0.239879 CGGCGGCTTTGCTTTTCTTA 59.760 50.000 7.61 0.00 34.52 2.10
5502 5889 3.325870 GGCGGCTTTGCTTTTCTTATTT 58.674 40.909 0.00 0.00 34.52 1.40
5503 5890 3.367932 GGCGGCTTTGCTTTTCTTATTTC 59.632 43.478 0.00 0.00 34.52 2.17
5504 5891 4.237724 GCGGCTTTGCTTTTCTTATTTCT 58.762 39.130 0.00 0.00 0.00 2.52
5505 5892 4.686091 GCGGCTTTGCTTTTCTTATTTCTT 59.314 37.500 0.00 0.00 0.00 2.52
5506 5893 5.164051 GCGGCTTTGCTTTTCTTATTTCTTC 60.164 40.000 0.00 0.00 0.00 2.87
5507 5894 5.346011 CGGCTTTGCTTTTCTTATTTCTTCC 59.654 40.000 0.00 0.00 0.00 3.46
5508 5895 6.459066 GGCTTTGCTTTTCTTATTTCTTCCT 58.541 36.000 0.00 0.00 0.00 3.36
5509 5896 7.574967 CGGCTTTGCTTTTCTTATTTCTTCCTA 60.575 37.037 0.00 0.00 0.00 2.94
5510 5897 7.542477 GGCTTTGCTTTTCTTATTTCTTCCTAC 59.458 37.037 0.00 0.00 0.00 3.18
5511 5898 8.300286 GCTTTGCTTTTCTTATTTCTTCCTACT 58.700 33.333 0.00 0.00 0.00 2.57
5512 5899 9.833182 CTTTGCTTTTCTTATTTCTTCCTACTC 57.167 33.333 0.00 0.00 0.00 2.59
5513 5900 7.923414 TGCTTTTCTTATTTCTTCCTACTCC 57.077 36.000 0.00 0.00 0.00 3.85
5514 5901 6.884836 TGCTTTTCTTATTTCTTCCTACTCCC 59.115 38.462 0.00 0.00 0.00 4.30
5515 5902 7.113437 GCTTTTCTTATTTCTTCCTACTCCCT 58.887 38.462 0.00 0.00 0.00 4.20
5516 5903 7.281324 GCTTTTCTTATTTCTTCCTACTCCCTC 59.719 40.741 0.00 0.00 0.00 4.30
5517 5904 6.809976 TTCTTATTTCTTCCTACTCCCTCC 57.190 41.667 0.00 0.00 0.00 4.30
5518 5905 4.894114 TCTTATTTCTTCCTACTCCCTCCG 59.106 45.833 0.00 0.00 0.00 4.63
5519 5906 2.617840 TTTCTTCCTACTCCCTCCGT 57.382 50.000 0.00 0.00 0.00 4.69
5520 5907 2.617840 TTCTTCCTACTCCCTCCGTT 57.382 50.000 0.00 0.00 0.00 4.44
5521 5908 2.140839 TCTTCCTACTCCCTCCGTTC 57.859 55.000 0.00 0.00 0.00 3.95
5522 5909 1.112950 CTTCCTACTCCCTCCGTTCC 58.887 60.000 0.00 0.00 0.00 3.62
5523 5910 0.682209 TTCCTACTCCCTCCGTTCCG 60.682 60.000 0.00 0.00 0.00 4.30
5524 5911 1.077212 CCTACTCCCTCCGTTCCGA 60.077 63.158 0.00 0.00 0.00 4.55
5525 5912 0.682209 CCTACTCCCTCCGTTCCGAA 60.682 60.000 0.00 0.00 0.00 4.30
5526 5913 1.400737 CTACTCCCTCCGTTCCGAAT 58.599 55.000 0.00 0.00 0.00 3.34
5527 5914 1.755380 CTACTCCCTCCGTTCCGAATT 59.245 52.381 0.00 0.00 0.00 2.17
5528 5915 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
5529 5916 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
5530 5917 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
5531 5918 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
5532 5919 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
5533 5920 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
5534 5921 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
5535 5922 3.368116 CCTCCGTTCCGAATTACTTGTCT 60.368 47.826 0.00 0.00 0.00 3.41
5536 5923 4.243270 CTCCGTTCCGAATTACTTGTCTT 58.757 43.478 0.00 0.00 0.00 3.01
5537 5924 5.389859 TCCGTTCCGAATTACTTGTCTTA 57.610 39.130 0.00 0.00 0.00 2.10
5538 5925 5.404946 TCCGTTCCGAATTACTTGTCTTAG 58.595 41.667 0.00 0.00 0.00 2.18
5539 5926 5.183713 TCCGTTCCGAATTACTTGTCTTAGA 59.816 40.000 0.00 0.00 0.00 2.10
5540 5927 6.040878 CCGTTCCGAATTACTTGTCTTAGAT 58.959 40.000 0.00 0.00 0.00 1.98
5541 5928 6.534079 CCGTTCCGAATTACTTGTCTTAGATT 59.466 38.462 0.00 0.00 0.00 2.40
5542 5929 7.064253 CCGTTCCGAATTACTTGTCTTAGATTT 59.936 37.037 0.00 0.00 0.00 2.17
5543 5930 7.898309 CGTTCCGAATTACTTGTCTTAGATTTG 59.102 37.037 0.00 0.00 0.00 2.32
5544 5931 8.718734 GTTCCGAATTACTTGTCTTAGATTTGT 58.281 33.333 0.00 0.00 0.00 2.83
5545 5932 8.475331 TCCGAATTACTTGTCTTAGATTTGTC 57.525 34.615 0.00 0.00 0.00 3.18
5546 5933 8.311836 TCCGAATTACTTGTCTTAGATTTGTCT 58.688 33.333 0.00 0.00 0.00 3.41
5547 5934 9.582431 CCGAATTACTTGTCTTAGATTTGTCTA 57.418 33.333 0.00 0.00 0.00 2.59
5554 5941 8.407064 ACTTGTCTTAGATTTGTCTAGATACGG 58.593 37.037 0.00 0.00 0.00 4.02
5555 5942 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
5556 5943 8.693120 TGTCTTAGATTTGTCTAGATACGGAT 57.307 34.615 0.00 0.00 0.00 4.18
5557 5944 8.568794 TGTCTTAGATTTGTCTAGATACGGATG 58.431 37.037 0.00 0.00 0.00 3.51
5558 5945 8.569641 GTCTTAGATTTGTCTAGATACGGATGT 58.430 37.037 0.00 0.00 0.00 3.06
5559 5946 9.788889 TCTTAGATTTGTCTAGATACGGATGTA 57.211 33.333 0.00 0.00 34.45 2.29
5600 5987 8.693120 ACATCCGTATCTAGACAAATCTAAGA 57.307 34.615 0.00 0.00 36.98 2.10
5601 5988 8.569641 ACATCCGTATCTAGACAAATCTAAGAC 58.430 37.037 0.00 0.00 36.98 3.01
5602 5989 8.568794 CATCCGTATCTAGACAAATCTAAGACA 58.431 37.037 0.00 0.00 36.98 3.41
5603 5990 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
5604 5991 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
5605 5992 8.407064 CCGTATCTAGACAAATCTAAGACAAGT 58.593 37.037 0.00 0.00 36.98 3.16
5612 5999 8.480643 AGACAAATCTAAGACAAGTAATTCGG 57.519 34.615 0.00 0.00 31.46 4.30
5613 6000 8.311836 AGACAAATCTAAGACAAGTAATTCGGA 58.688 33.333 0.00 0.00 31.46 4.55
5614 6001 8.842358 ACAAATCTAAGACAAGTAATTCGGAA 57.158 30.769 0.00 0.00 0.00 4.30
5615 6002 8.718734 ACAAATCTAAGACAAGTAATTCGGAAC 58.281 33.333 0.00 0.00 0.00 3.62
5634 6021 1.448922 CGGAGGGAGTAGCTCGGAAG 61.449 65.000 0.00 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 1.679898 GAGGGGTGTCTGTTCCTGG 59.320 63.158 0.00 0.00 0.00 4.45
128 129 6.946009 ACCCAGTGCTATTAGTTGTGTATTTT 59.054 34.615 0.00 0.00 0.00 1.82
129 130 6.481643 ACCCAGTGCTATTAGTTGTGTATTT 58.518 36.000 0.00 0.00 0.00 1.40
130 131 6.062258 ACCCAGTGCTATTAGTTGTGTATT 57.938 37.500 0.00 0.00 0.00 1.89
132 133 4.528987 TGACCCAGTGCTATTAGTTGTGTA 59.471 41.667 0.00 0.00 0.00 2.90
133 134 3.326588 TGACCCAGTGCTATTAGTTGTGT 59.673 43.478 0.00 0.00 0.00 3.72
175 203 2.097791 GCGTGCTACTAGACTGCTAAGT 59.902 50.000 0.00 0.00 40.21 2.24
178 206 1.022735 GGCGTGCTACTAGACTGCTA 58.977 55.000 0.00 0.00 0.00 3.49
249 277 7.011763 CGATTAATCAAGTTGACATCCATCTGT 59.988 37.037 15.57 0.00 0.00 3.41
300 328 8.223177 TGTGTAGGTAGATTCTAAGCTAGAAC 57.777 38.462 0.00 3.05 46.58 3.01
320 351 2.483877 CGCCTCAGATTTGCTTTGTGTA 59.516 45.455 0.00 0.00 0.00 2.90
350 381 2.648613 ATTCGGTTGGGGGTGTTGCA 62.649 55.000 0.00 0.00 0.00 4.08
353 384 2.679429 TTAATTCGGTTGGGGGTGTT 57.321 45.000 0.00 0.00 0.00 3.32
362 393 6.037830 CGTTATCTGGTGGAATTAATTCGGTT 59.962 38.462 19.41 3.11 37.67 4.44
364 395 5.756347 TCGTTATCTGGTGGAATTAATTCGG 59.244 40.000 19.41 4.90 37.67 4.30
367 398 9.801873 CAAATTCGTTATCTGGTGGAATTAATT 57.198 29.630 0.00 0.00 36.58 1.40
369 400 7.094162 TGCAAATTCGTTATCTGGTGGAATTAA 60.094 33.333 0.00 0.00 36.58 1.40
370 401 6.375736 TGCAAATTCGTTATCTGGTGGAATTA 59.624 34.615 0.00 0.00 36.58 1.40
371 402 5.184864 TGCAAATTCGTTATCTGGTGGAATT 59.815 36.000 0.00 0.00 38.55 2.17
373 404 4.075682 TGCAAATTCGTTATCTGGTGGAA 58.924 39.130 0.00 0.00 0.00 3.53
375 406 4.165779 GTTGCAAATTCGTTATCTGGTGG 58.834 43.478 0.00 0.00 0.00 4.61
376 407 4.082787 AGGTTGCAAATTCGTTATCTGGTG 60.083 41.667 0.00 0.00 0.00 4.17
377 408 4.079253 AGGTTGCAAATTCGTTATCTGGT 58.921 39.130 0.00 0.00 0.00 4.00
378 409 4.701956 AGGTTGCAAATTCGTTATCTGG 57.298 40.909 0.00 0.00 0.00 3.86
379 410 6.248420 CGTTTAGGTTGCAAATTCGTTATCTG 59.752 38.462 0.00 0.00 0.00 2.90
380 411 6.148150 TCGTTTAGGTTGCAAATTCGTTATCT 59.852 34.615 0.00 0.00 0.00 1.98
381 412 6.247791 GTCGTTTAGGTTGCAAATTCGTTATC 59.752 38.462 0.00 0.00 0.00 1.75
382 413 6.081693 GTCGTTTAGGTTGCAAATTCGTTAT 58.918 36.000 0.00 0.00 0.00 1.89
383 414 5.442402 GTCGTTTAGGTTGCAAATTCGTTA 58.558 37.500 0.00 0.00 0.00 3.18
385 416 3.304190 GGTCGTTTAGGTTGCAAATTCGT 60.304 43.478 0.00 0.00 0.00 3.85
386 417 3.231160 GGTCGTTTAGGTTGCAAATTCG 58.769 45.455 0.00 1.15 0.00 3.34
387 418 4.231718 TGGTCGTTTAGGTTGCAAATTC 57.768 40.909 0.00 0.00 0.00 2.17
437 472 1.919240 TATATGCGTGGATCCCGTCT 58.081 50.000 19.53 11.91 0.00 4.18
438 473 2.165641 TCATATATGCGTGGATCCCGTC 59.834 50.000 19.53 13.79 0.00 4.79
453 488 6.931281 GGTAGATGTTGCTTCTTGCTCATATA 59.069 38.462 0.00 0.00 43.37 0.86
485 523 2.753043 CCCTTTGCTGATGCCGCT 60.753 61.111 0.00 0.00 38.71 5.52
488 526 1.755783 CCTCCCCTTTGCTGATGCC 60.756 63.158 0.00 0.00 38.71 4.40
495 533 3.268103 TTCTCGCCCTCCCCTTTGC 62.268 63.158 0.00 0.00 0.00 3.68
496 534 1.078143 CTTCTCGCCCTCCCCTTTG 60.078 63.158 0.00 0.00 0.00 2.77
497 535 2.301738 CCTTCTCGCCCTCCCCTTT 61.302 63.158 0.00 0.00 0.00 3.11
728 783 1.007607 CCCTAAACCCCACCATCCTT 58.992 55.000 0.00 0.00 0.00 3.36
729 784 0.178813 ACCCTAAACCCCACCATCCT 60.179 55.000 0.00 0.00 0.00 3.24
847 903 0.909623 AACTGGGCCGTAGTAAGCAT 59.090 50.000 11.24 0.00 0.00 3.79
902 958 2.664851 CTGCCTCGCACGTTGGAA 60.665 61.111 8.51 0.00 33.79 3.53
931 989 1.095600 GGAAAGGGAATGGAGTTCGC 58.904 55.000 0.00 0.00 46.86 4.70
932 990 2.489938 TGGAAAGGGAATGGAGTTCG 57.510 50.000 0.00 0.00 37.73 3.95
933 991 5.337571 GGAAATTGGAAAGGGAATGGAGTTC 60.338 44.000 0.00 0.00 36.04 3.01
934 992 4.532126 GGAAATTGGAAAGGGAATGGAGTT 59.468 41.667 0.00 0.00 0.00 3.01
935 993 4.096681 GGAAATTGGAAAGGGAATGGAGT 58.903 43.478 0.00 0.00 0.00 3.85
937 995 3.837731 GTGGAAATTGGAAAGGGAATGGA 59.162 43.478 0.00 0.00 0.00 3.41
939 997 3.055167 GGGTGGAAATTGGAAAGGGAATG 60.055 47.826 0.00 0.00 0.00 2.67
940 998 3.181329 GGGTGGAAATTGGAAAGGGAAT 58.819 45.455 0.00 0.00 0.00 3.01
941 999 2.181196 AGGGTGGAAATTGGAAAGGGAA 59.819 45.455 0.00 0.00 0.00 3.97
942 1000 1.792651 AGGGTGGAAATTGGAAAGGGA 59.207 47.619 0.00 0.00 0.00 4.20
943 1001 1.901833 CAGGGTGGAAATTGGAAAGGG 59.098 52.381 0.00 0.00 0.00 3.95
944 1002 1.276138 GCAGGGTGGAAATTGGAAAGG 59.724 52.381 0.00 0.00 0.00 3.11
945 1003 2.028748 CAGCAGGGTGGAAATTGGAAAG 60.029 50.000 0.00 0.00 0.00 2.62
946 1004 1.969923 CAGCAGGGTGGAAATTGGAAA 59.030 47.619 0.00 0.00 0.00 3.13
1018 1089 3.151022 CTCCTCCCGCTCCCTCAC 61.151 72.222 0.00 0.00 0.00 3.51
1019 1090 4.465446 CCTCCTCCCGCTCCCTCA 62.465 72.222 0.00 0.00 0.00 3.86
1083 1154 4.390048 GCAAACCCCTACTTGCGA 57.610 55.556 0.00 0.00 38.66 5.10
1114 1185 1.346722 AGAACAGTAAACCCCGAGTGG 59.653 52.381 0.00 0.00 0.00 4.00
1116 1187 4.285260 ACATAAGAACAGTAAACCCCGAGT 59.715 41.667 0.00 0.00 0.00 4.18
1120 1191 7.279536 GCTACTTACATAAGAACAGTAAACCCC 59.720 40.741 5.66 0.00 37.08 4.95
1123 1194 9.635520 TCAGCTACTTACATAAGAACAGTAAAC 57.364 33.333 5.66 0.00 37.08 2.01
1128 1199 9.371136 TCAATTCAGCTACTTACATAAGAACAG 57.629 33.333 5.66 1.69 37.08 3.16
1132 1203 8.883731 GCTTTCAATTCAGCTACTTACATAAGA 58.116 33.333 5.66 0.00 33.97 2.10
1135 1206 8.792830 AAGCTTTCAATTCAGCTACTTACATA 57.207 30.769 0.00 0.00 46.01 2.29
1136 1207 7.609532 AGAAGCTTTCAATTCAGCTACTTACAT 59.390 33.333 0.00 0.00 46.01 2.29
1138 1209 7.371126 AGAAGCTTTCAATTCAGCTACTTAC 57.629 36.000 0.00 0.00 46.01 2.34
1139 1210 9.102757 CATAGAAGCTTTCAATTCAGCTACTTA 57.897 33.333 0.00 0.12 46.01 2.24
1140 1211 7.414984 GCATAGAAGCTTTCAATTCAGCTACTT 60.415 37.037 0.00 0.00 46.01 2.24
1234 1358 1.685421 GGAGCTGAGGCAGAGGAGT 60.685 63.158 0.00 0.00 41.70 3.85
1326 1450 0.107654 ACAGGCTTATCGAACTGCCC 60.108 55.000 18.17 3.90 45.94 5.36
1348 1472 0.179166 CCGTTGCCAATTCACCATCG 60.179 55.000 0.00 0.00 0.00 3.84
1378 1503 5.900339 TTTTTACACAGAACGAGCTAGTG 57.100 39.130 0.00 0.00 36.34 2.74
1396 1521 4.783227 TGTCCCTGCTCCTAGTAGATTTTT 59.217 41.667 0.00 0.00 28.61 1.94
1504 1637 5.904630 TGTAATTGTCGACACAAAAACATCG 59.095 36.000 19.90 0.00 45.78 3.84
1505 1638 7.431084 ACTTGTAATTGTCGACACAAAAACATC 59.569 33.333 19.90 3.07 45.78 3.06
1506 1639 7.254852 ACTTGTAATTGTCGACACAAAAACAT 58.745 30.769 19.90 4.07 45.78 2.71
1548 1765 5.772825 TTATTCAGGGCTATCATGCAAAC 57.227 39.130 0.00 0.00 34.04 2.93
1549 1766 7.233632 AGTATTATTCAGGGCTATCATGCAAA 58.766 34.615 0.00 0.00 34.04 3.68
1550 1767 6.782986 AGTATTATTCAGGGCTATCATGCAA 58.217 36.000 0.00 0.00 34.04 4.08
1551 1768 6.013466 TGAGTATTATTCAGGGCTATCATGCA 60.013 38.462 0.00 0.00 34.04 3.96
1552 1769 6.409704 TGAGTATTATTCAGGGCTATCATGC 58.590 40.000 0.00 0.00 0.00 4.06
1553 1770 7.548427 CACTGAGTATTATTCAGGGCTATCATG 59.452 40.741 17.45 3.91 44.96 3.07
1554 1771 7.619050 CACTGAGTATTATTCAGGGCTATCAT 58.381 38.462 17.45 0.00 44.96 2.45
1562 1779 9.099454 GGAACTTAACACTGAGTATTATTCAGG 57.901 37.037 17.45 10.46 44.96 3.86
1563 1780 9.653287 TGGAACTTAACACTGAGTATTATTCAG 57.347 33.333 13.07 13.07 45.89 3.02
1564 1781 9.431887 GTGGAACTTAACACTGAGTATTATTCA 57.568 33.333 1.04 0.00 34.84 2.57
1565 1782 8.880750 GGTGGAACTTAACACTGAGTATTATTC 58.119 37.037 0.00 0.00 37.72 1.75
1572 1789 3.454812 AGTGGTGGAACTTAACACTGAGT 59.545 43.478 0.00 0.00 40.56 3.41
1583 1800 3.426615 TGAAACAACAAGTGGTGGAACT 58.573 40.909 0.70 0.00 36.97 3.01
1588 1805 4.502962 ACCAAATGAAACAACAAGTGGTG 58.497 39.130 0.00 0.00 38.59 4.17
1590 1807 4.753233 TGACCAAATGAAACAACAAGTGG 58.247 39.130 0.00 0.00 35.37 4.00
1591 1808 6.907206 ATTGACCAAATGAAACAACAAGTG 57.093 33.333 0.00 0.00 0.00 3.16
1622 1840 2.579873 GGTGCCTGAATCATACATGCT 58.420 47.619 0.00 0.00 31.99 3.79
1626 1844 0.463654 GCCGGTGCCTGAATCATACA 60.464 55.000 1.90 0.00 0.00 2.29
1632 1850 1.228552 AAACTGCCGGTGCCTGAAT 60.229 52.632 1.90 0.00 36.33 2.57
1642 1860 3.963383 AACAAGTAGAACAAACTGCCG 57.037 42.857 0.00 0.00 0.00 5.69
1701 1951 5.049129 GCCATCTACAATTGATAGGCTGTTC 60.049 44.000 13.59 0.00 36.32 3.18
1720 1971 2.863704 GCACAACCAGAAACAAGCCATC 60.864 50.000 0.00 0.00 0.00 3.51
1769 2020 4.552767 CGGACATATTTCCATGCTCGAAAC 60.553 45.833 8.60 0.00 35.04 2.78
1771 2022 3.130633 CGGACATATTTCCATGCTCGAA 58.869 45.455 8.60 0.00 35.04 3.71
1791 2042 0.880441 TGCCCAAATCACATGTCACG 59.120 50.000 0.00 0.00 0.00 4.35
1845 2096 6.038825 TGACTGTGTAATGAACATCCGTTTTT 59.961 34.615 0.00 0.00 41.10 1.94
1846 2097 5.529430 TGACTGTGTAATGAACATCCGTTTT 59.471 36.000 0.00 0.00 41.10 2.43
1847 2098 5.060506 TGACTGTGTAATGAACATCCGTTT 58.939 37.500 0.00 0.00 41.10 3.60
1848 2099 4.637276 TGACTGTGTAATGAACATCCGTT 58.363 39.130 0.00 0.00 41.10 4.44
1849 2100 4.265904 TGACTGTGTAATGAACATCCGT 57.734 40.909 0.00 0.00 41.10 4.69
1867 2118 4.865865 GCCCTAGAGCCACATGAC 57.134 61.111 0.00 0.00 0.00 3.06
1878 2129 3.756963 GACAAGGTAAAAAGTGGCCCTAG 59.243 47.826 0.00 0.00 0.00 3.02
1888 2139 7.762159 GGATTCACAAACAAGACAAGGTAAAAA 59.238 33.333 0.00 0.00 0.00 1.94
1908 2159 3.242867 ACTGTCTCAGTGGAAGGATTCA 58.757 45.455 1.44 0.00 43.55 2.57
1910 2161 3.008485 GGAACTGTCTCAGTGGAAGGATT 59.992 47.826 3.12 0.00 44.62 3.01
1950 2201 1.072489 TGATACGTGGGCCTTTTGACA 59.928 47.619 4.53 0.00 0.00 3.58
1997 2248 4.513442 TGCCTAGTGACAACCAATATGAC 58.487 43.478 0.00 0.00 0.00 3.06
2005 2256 1.298859 CGCCTTGCCTAGTGACAACC 61.299 60.000 0.00 0.00 0.00 3.77
2007 2258 0.320421 GTCGCCTTGCCTAGTGACAA 60.320 55.000 5.95 0.00 31.28 3.18
2019 2270 3.963428 AGATACAAAGTGAGTCGCCTT 57.037 42.857 0.00 0.00 0.00 4.35
2029 2280 7.277981 CGATGGCTGTAAAAGTAGATACAAAGT 59.722 37.037 0.00 0.00 32.05 2.66
2044 2365 2.816689 CGTACATTCCGATGGCTGTAA 58.183 47.619 0.00 0.00 37.60 2.41
2053 2374 2.933906 GGAAAATCTGCGTACATTCCGA 59.066 45.455 0.00 0.00 0.00 4.55
2054 2375 2.936498 AGGAAAATCTGCGTACATTCCG 59.064 45.455 0.00 0.00 40.90 4.30
2057 2378 6.811253 TTGTTAGGAAAATCTGCGTACATT 57.189 33.333 0.00 0.00 0.00 2.71
2083 2404 6.929049 CACTGTGACCACTTAAATGAGAGTTA 59.071 38.462 0.32 0.00 0.00 2.24
2086 2407 4.153117 GCACTGTGACCACTTAAATGAGAG 59.847 45.833 12.86 0.00 0.00 3.20
2134 2455 5.001232 GTGTAGCATGGTCAGGTCTAAAAA 58.999 41.667 0.00 0.00 0.00 1.94
2136 2457 3.838317 AGTGTAGCATGGTCAGGTCTAAA 59.162 43.478 0.00 0.00 0.00 1.85
2137 2458 3.441101 AGTGTAGCATGGTCAGGTCTAA 58.559 45.455 0.00 0.00 0.00 2.10
2142 2465 2.027745 ACTTGAGTGTAGCATGGTCAGG 60.028 50.000 0.00 0.00 0.00 3.86
2172 2495 1.592400 CATATCTCGCTGCACGGCA 60.592 57.895 0.00 0.00 43.89 5.69
2173 2496 1.592669 ACATATCTCGCTGCACGGC 60.593 57.895 0.00 0.00 43.89 5.68
2182 2505 5.730296 AATAAGACCCTCCACATATCTCG 57.270 43.478 0.00 0.00 0.00 4.04
2195 2518 7.767659 ACCACGAGACTTAATTAAATAAGACCC 59.232 37.037 15.65 1.63 36.57 4.46
2208 2531 8.796475 AGTTAGTGTATTAACCACGAGACTTAA 58.204 33.333 0.00 0.00 37.88 1.85
2209 2532 8.340618 AGTTAGTGTATTAACCACGAGACTTA 57.659 34.615 0.00 0.00 37.88 2.24
2210 2533 7.224522 AGTTAGTGTATTAACCACGAGACTT 57.775 36.000 0.00 0.00 37.88 3.01
2211 2534 6.830873 AGTTAGTGTATTAACCACGAGACT 57.169 37.500 0.00 5.07 37.88 3.24
2224 2547 5.483685 TCCAAGCAGACAAGTTAGTGTAT 57.516 39.130 0.00 0.00 0.00 2.29
2225 2548 4.948341 TCCAAGCAGACAAGTTAGTGTA 57.052 40.909 0.00 0.00 0.00 2.90
2232 2555 3.299503 ACCAAAATCCAAGCAGACAAGT 58.700 40.909 0.00 0.00 0.00 3.16
2241 2564 5.975693 TTTAGCCTGTACCAAAATCCAAG 57.024 39.130 0.00 0.00 0.00 3.61
2242 2565 5.186797 CCATTTAGCCTGTACCAAAATCCAA 59.813 40.000 0.00 0.00 0.00 3.53
2250 2573 1.340600 GGTGCCATTTAGCCTGTACCA 60.341 52.381 0.00 0.00 0.00 3.25
2260 2583 6.119536 CACTCTTTACTATGGGTGCCATTTA 58.880 40.000 0.00 0.00 42.23 1.40
2261 2584 4.949856 CACTCTTTACTATGGGTGCCATTT 59.050 41.667 0.00 0.00 42.23 2.32
2262 2585 4.526970 CACTCTTTACTATGGGTGCCATT 58.473 43.478 0.00 0.00 42.23 3.16
2266 2589 2.289565 GGCACTCTTTACTATGGGTGC 58.710 52.381 9.21 9.21 46.02 5.01
2295 2619 5.221048 GGTGGCGACATGCTAAGAAAATAAT 60.221 40.000 0.00 0.00 46.14 1.28
2302 2626 0.391130 GTGGTGGCGACATGCTAAGA 60.391 55.000 0.00 0.00 46.14 2.10
2312 2636 2.039818 TTGTTTGTTAGTGGTGGCGA 57.960 45.000 0.00 0.00 0.00 5.54
2331 2655 2.629137 TCAGCTGCACCAAACATTTGAT 59.371 40.909 9.47 0.00 40.55 2.57
2334 2658 3.756933 AATCAGCTGCACCAAACATTT 57.243 38.095 9.47 0.00 0.00 2.32
2438 2762 6.377996 CCAGATCCCAACTCAATTAATGAACA 59.622 38.462 0.00 0.00 37.67 3.18
2481 2805 8.581057 TGAAGTAAATGCGATAGAGAATTCTC 57.419 34.615 25.20 25.20 43.17 2.87
2482 2806 8.948631 TTGAAGTAAATGCGATAGAGAATTCT 57.051 30.769 7.95 7.95 37.46 2.40
2511 2835 8.147704 TGATAGTGTCAGTGTTTGTAAGATCAA 58.852 33.333 0.00 0.00 31.80 2.57
2534 2866 4.392940 GGTAATGCCTAGCAAGTCATGAT 58.607 43.478 0.00 0.00 43.62 2.45
2536 2868 2.545526 CGGTAATGCCTAGCAAGTCATG 59.454 50.000 0.00 0.00 43.62 3.07
2537 2869 2.485479 CCGGTAATGCCTAGCAAGTCAT 60.485 50.000 0.00 0.00 43.62 3.06
2559 2891 3.492421 CAGAAACGGCTGCACAATATT 57.508 42.857 0.50 0.00 0.00 1.28
2766 3102 5.873712 GGATGATTGCTGATACATAGACTGG 59.126 44.000 0.00 0.00 0.00 4.00
2865 3205 5.283717 CGGACAGACTGAAAATTTTAATGCG 59.716 40.000 10.08 0.00 0.00 4.73
2969 3310 1.113788 AAGTGTGGCATGTGCAAAGT 58.886 45.000 7.36 0.00 44.36 2.66
3150 3491 8.503458 AGTATCAGTTCAGATTCAATTTCTGG 57.497 34.615 5.92 0.00 40.80 3.86
3160 3501 7.013655 ACTGCAACAAAAGTATCAGTTCAGATT 59.986 33.333 0.00 0.00 31.51 2.40
3444 3785 2.621338 CCTGCATACGAAGAAGCTTCA 58.379 47.619 27.57 7.57 0.00 3.02
3546 3887 7.666388 TGGACGGGAAGATAATGAGTTTTAAAA 59.334 33.333 0.00 0.00 0.00 1.52
3549 3890 6.302535 TGGACGGGAAGATAATGAGTTTTA 57.697 37.500 0.00 0.00 0.00 1.52
3550 3891 5.174037 TGGACGGGAAGATAATGAGTTTT 57.826 39.130 0.00 0.00 0.00 2.43
3551 3892 4.837093 TGGACGGGAAGATAATGAGTTT 57.163 40.909 0.00 0.00 0.00 2.66
3566 3907 6.431543 ACTCTACTCATATATGTCTTGGACGG 59.568 42.308 12.42 0.31 34.95 4.79
3583 3924 7.767261 TCTAGAAAGCATTCAGAACTCTACTC 58.233 38.462 4.27 0.00 38.06 2.59
3629 3970 4.441773 GCAATTGGCACATCATAATGGACA 60.442 41.667 7.72 0.00 43.97 4.02
3630 3971 4.053295 GCAATTGGCACATCATAATGGAC 58.947 43.478 7.72 0.00 43.97 4.02
3631 3972 4.325028 GCAATTGGCACATCATAATGGA 57.675 40.909 7.72 0.00 43.97 3.41
3697 4038 8.534778 CGAATAAAGCAAGGAGAAATAAAATGC 58.465 33.333 0.00 0.00 0.00 3.56
3705 4046 7.972832 TCTTAACGAATAAAGCAAGGAGAAA 57.027 32.000 0.00 0.00 0.00 2.52
3721 4062 4.398988 TGGGCGAGTAGTTATTCTTAACGA 59.601 41.667 0.00 0.00 42.14 3.85
3725 4066 5.655532 AGAACTGGGCGAGTAGTTATTCTTA 59.344 40.000 1.54 0.00 37.27 2.10
3730 4071 3.118738 CCAAGAACTGGGCGAGTAGTTAT 60.119 47.826 1.54 0.00 42.17 1.89
3743 4084 2.485426 ACGCAACATGATCCAAGAACTG 59.515 45.455 0.00 0.00 0.00 3.16
3744 4085 2.783135 ACGCAACATGATCCAAGAACT 58.217 42.857 0.00 0.00 0.00 3.01
3755 4099 4.668576 ACAGATTAGTCAACGCAACATG 57.331 40.909 0.00 0.00 0.00 3.21
3759 4103 7.064134 CCAAACTATACAGATTAGTCAACGCAA 59.936 37.037 0.00 0.00 0.00 4.85
3763 4107 8.258708 AGACCCAAACTATACAGATTAGTCAAC 58.741 37.037 0.00 0.00 28.93 3.18
3780 4124 1.671379 GGCAGACGGAGACCCAAAC 60.671 63.158 0.00 0.00 0.00 2.93
3788 4132 7.772166 TCATATACTTATATTGGCAGACGGAG 58.228 38.462 0.00 0.00 0.00 4.63
3789 4133 7.712204 TCATATACTTATATTGGCAGACGGA 57.288 36.000 0.00 0.00 0.00 4.69
3794 4138 9.783081 TGGCATATCATATACTTATATTGGCAG 57.217 33.333 9.31 0.00 35.32 4.85
3825 4169 8.893727 TCAGCTACCTTTTAAGCAAAGATATTC 58.106 33.333 0.00 0.00 44.40 1.75
3848 4192 4.334759 CAGTTTTATCCATGAGTGCCTCAG 59.665 45.833 10.13 3.93 44.08 3.35
3903 4247 4.700213 GCCATTGTAAGTGCTTCTTAGGAA 59.300 41.667 3.01 0.00 39.03 3.36
3931 4275 6.783892 AGCATATGCAACGTTTTGATTTTT 57.216 29.167 28.62 0.00 45.16 1.94
3936 4280 6.188400 TCATTAGCATATGCAACGTTTTGA 57.812 33.333 28.62 16.88 45.16 2.69
3970 4314 4.974275 CAGTGTGAGCAATTTTGACTCAAG 59.026 41.667 14.60 6.35 40.38 3.02
3973 4317 4.035558 TCACAGTGTGAGCAATTTTGACTC 59.964 41.667 22.06 1.89 37.67 3.36
3978 4322 5.068198 AGTGAATCACAGTGTGAGCAATTTT 59.932 36.000 28.54 17.77 46.04 1.82
3982 4326 3.198409 AGTGAATCACAGTGTGAGCAA 57.802 42.857 28.54 14.76 46.04 3.91
3986 4330 5.017294 TGTACAAGTGAATCACAGTGTGA 57.983 39.130 27.35 27.35 46.90 3.58
4033 4377 3.331150 ACATGTCACGCCGAATTTAGAA 58.669 40.909 0.00 0.00 0.00 2.10
4035 4379 3.863424 AGTACATGTCACGCCGAATTTAG 59.137 43.478 0.00 0.00 0.00 1.85
4041 4385 3.513680 AAATAGTACATGTCACGCCGA 57.486 42.857 0.00 0.00 0.00 5.54
4042 4386 4.743151 ACATAAATAGTACATGTCACGCCG 59.257 41.667 0.00 0.00 0.00 6.46
4043 4387 7.143340 TCTACATAAATAGTACATGTCACGCC 58.857 38.462 0.00 0.00 34.78 5.68
4044 4388 7.148950 GCTCTACATAAATAGTACATGTCACGC 60.149 40.741 0.00 0.00 34.78 5.34
4045 4389 8.076781 AGCTCTACATAAATAGTACATGTCACG 58.923 37.037 0.00 0.00 34.78 4.35
4053 4397 9.896263 GGTTCTGTAGCTCTACATAAATAGTAC 57.104 37.037 9.87 2.77 44.15 2.73
4054 4398 9.863650 AGGTTCTGTAGCTCTACATAAATAGTA 57.136 33.333 9.87 0.00 44.15 1.82
4055 4399 8.770010 AGGTTCTGTAGCTCTACATAAATAGT 57.230 34.615 9.87 0.00 44.15 2.12
4087 4431 4.898320 TGACACTCTGCATGTCTGTAAAT 58.102 39.130 17.40 0.00 45.58 1.40
4091 4435 2.696506 CATGACACTCTGCATGTCTGT 58.303 47.619 17.40 6.16 45.58 3.41
4098 4442 0.890542 GGGCAACATGACACTCTGCA 60.891 55.000 0.00 0.00 34.66 4.41
4102 4446 3.329300 AGTGGGCAACATGACACTC 57.671 52.632 0.00 0.00 39.84 3.51
4119 4463 4.443394 GCAAGCAACAAACTGATGAAAGAG 59.557 41.667 0.00 0.00 0.00 2.85
4122 4466 4.114073 CAGCAAGCAACAAACTGATGAAA 58.886 39.130 0.00 0.00 0.00 2.69
4125 4469 2.034939 TCCAGCAAGCAACAAACTGATG 59.965 45.455 0.00 0.00 0.00 3.07
4136 4480 1.676916 GCAGTGTATCTCCAGCAAGCA 60.677 52.381 0.00 0.00 0.00 3.91
4142 4486 1.741732 GCAGGTGCAGTGTATCTCCAG 60.742 57.143 0.00 0.00 41.59 3.86
4144 4488 0.539051 AGCAGGTGCAGTGTATCTCC 59.461 55.000 4.48 0.00 45.16 3.71
4192 4536 0.881118 GCTCAGGAACGCATTTGGAA 59.119 50.000 0.00 0.00 0.00 3.53
4216 4560 1.338200 CCGAGCCAGCCTGTATATTCC 60.338 57.143 0.00 0.00 0.00 3.01
4221 4565 0.106167 TACTCCGAGCCAGCCTGTAT 60.106 55.000 0.00 0.00 0.00 2.29
4253 4597 3.636300 ACCAATTGCAGCTGTCAGTAAAA 59.364 39.130 16.64 0.00 0.00 1.52
4267 4611 4.336433 ACATGTCAGTATGCTACCAATTGC 59.664 41.667 0.00 0.00 34.76 3.56
4307 4651 3.754965 TGCAAGCTTTAGAACAGGACAT 58.245 40.909 0.00 0.00 0.00 3.06
4337 4682 4.772100 AGGCCATTTATTGTTAGCAGTTGT 59.228 37.500 5.01 0.00 0.00 3.32
4368 4713 7.411486 AGATAACCGGACATAATATCTCAGG 57.589 40.000 9.46 0.00 29.60 3.86
4382 4727 1.843368 AGGACAACGAGATAACCGGA 58.157 50.000 9.46 0.00 0.00 5.14
4392 4737 2.167693 ACAGAAGTGTGAAGGACAACGA 59.832 45.455 0.00 0.00 35.91 3.85
4394 4739 6.619801 ATTTACAGAAGTGTGAAGGACAAC 57.380 37.500 0.00 0.00 35.77 3.32
4404 4752 6.531439 GTCGCGAAAATATTTACAGAAGTGT 58.469 36.000 12.06 0.00 41.06 3.55
4405 4753 5.666878 CGTCGCGAAAATATTTACAGAAGTG 59.333 40.000 12.06 0.00 0.00 3.16
4410 4758 4.183818 CGACGTCGCGAAAATATTTACAG 58.816 43.478 26.59 0.00 0.00 2.74
4417 4765 1.898938 ATGACGACGTCGCGAAAATA 58.101 45.000 35.92 15.42 44.43 1.40
4423 4771 0.519792 TGAGTTATGACGACGTCGCG 60.520 55.000 35.92 16.67 44.43 5.87
4426 4774 5.227391 CACTTGTATGAGTTATGACGACGTC 59.773 44.000 20.97 20.97 0.00 4.34
4428 4776 5.329493 TCACTTGTATGAGTTATGACGACG 58.671 41.667 0.00 0.00 0.00 5.12
4453 4801 2.166664 AGTGTTGGGATCGCTCTAAGAC 59.833 50.000 11.46 6.00 0.00 3.01
4463 4811 3.057526 GTGGCTAACAAAGTGTTGGGATC 60.058 47.826 3.90 0.00 41.30 3.36
4465 4813 2.092103 AGTGGCTAACAAAGTGTTGGGA 60.092 45.455 3.90 0.00 41.30 4.37
4467 4815 3.632145 AGAAGTGGCTAACAAAGTGTTGG 59.368 43.478 3.90 2.17 41.30 3.77
4468 4816 4.096382 ACAGAAGTGGCTAACAAAGTGTTG 59.904 41.667 3.90 0.00 41.30 3.33
4469 4817 4.270008 ACAGAAGTGGCTAACAAAGTGTT 58.730 39.130 0.00 0.00 43.88 3.32
4477 4825 3.315191 TGAAGCAAACAGAAGTGGCTAAC 59.685 43.478 0.00 0.00 37.99 2.34
4478 4826 3.550820 TGAAGCAAACAGAAGTGGCTAA 58.449 40.909 0.00 0.00 37.99 3.09
4488 4837 6.429385 AGGAGAGTTAAATCTGAAGCAAACAG 59.571 38.462 10.69 0.00 36.80 3.16
4492 4841 9.520515 AAAATAGGAGAGTTAAATCTGAAGCAA 57.479 29.630 10.69 0.00 0.00 3.91
4500 4849 7.548075 TGGACGACAAAATAGGAGAGTTAAATC 59.452 37.037 0.00 0.00 0.00 2.17
4505 4854 4.884668 TGGACGACAAAATAGGAGAGTT 57.115 40.909 0.00 0.00 0.00 3.01
4506 4855 4.283722 AGTTGGACGACAAAATAGGAGAGT 59.716 41.667 0.00 0.00 41.58 3.24
4509 4858 6.164176 AGTAAGTTGGACGACAAAATAGGAG 58.836 40.000 0.00 0.00 41.58 3.69
4512 4861 8.084590 AGAAAGTAAGTTGGACGACAAAATAG 57.915 34.615 0.00 0.00 41.58 1.73
4513 4862 8.441312 AAGAAAGTAAGTTGGACGACAAAATA 57.559 30.769 0.00 0.00 41.58 1.40
4517 4866 5.667466 AGAAGAAAGTAAGTTGGACGACAA 58.333 37.500 0.00 0.00 36.54 3.18
4521 4870 6.782150 ACAAAAGAAGAAAGTAAGTTGGACG 58.218 36.000 0.00 0.00 0.00 4.79
4522 4871 8.027189 ACAACAAAAGAAGAAAGTAAGTTGGAC 58.973 33.333 0.00 0.00 38.41 4.02
4539 4888 6.072728 TGGAATCGGTCAGAATACAACAAAAG 60.073 38.462 0.00 0.00 0.00 2.27
4540 4889 5.765677 TGGAATCGGTCAGAATACAACAAAA 59.234 36.000 0.00 0.00 0.00 2.44
4552 4901 4.576053 TGCATTAATTCTGGAATCGGTCAG 59.424 41.667 0.00 0.00 0.00 3.51
4554 4903 5.471456 AGATGCATTAATTCTGGAATCGGTC 59.529 40.000 0.00 0.00 0.00 4.79
4555 4904 5.380043 AGATGCATTAATTCTGGAATCGGT 58.620 37.500 0.00 0.00 0.00 4.69
4584 4937 9.685276 TGGTTAAGAGAATACACATCATCATTT 57.315 29.630 0.00 0.00 0.00 2.32
4587 4940 8.539544 TCTTGGTTAAGAGAATACACATCATCA 58.460 33.333 0.00 0.00 37.99 3.07
4588 4941 8.821894 GTCTTGGTTAAGAGAATACACATCATC 58.178 37.037 0.00 0.00 43.29 2.92
4589 4942 8.321353 TGTCTTGGTTAAGAGAATACACATCAT 58.679 33.333 0.00 0.00 43.29 2.45
4590 4943 7.602644 GTGTCTTGGTTAAGAGAATACACATCA 59.397 37.037 0.00 0.00 43.29 3.07
4591 4944 7.819900 AGTGTCTTGGTTAAGAGAATACACATC 59.180 37.037 0.00 0.00 43.29 3.06
4592 4945 7.680730 AGTGTCTTGGTTAAGAGAATACACAT 58.319 34.615 0.00 0.00 43.29 3.21
4596 4953 8.308207 AGAGAAGTGTCTTGGTTAAGAGAATAC 58.692 37.037 0.00 0.00 43.29 1.89
4609 4966 6.690957 GTCATATCGAGAAGAGAAGTGTCTTG 59.309 42.308 0.00 0.00 36.89 3.02
4614 4971 5.506686 TGGTCATATCGAGAAGAGAAGTG 57.493 43.478 0.00 0.00 0.00 3.16
4615 4972 4.037446 GCTGGTCATATCGAGAAGAGAAGT 59.963 45.833 0.00 0.00 0.00 3.01
4619 4976 3.998099 TGCTGGTCATATCGAGAAGAG 57.002 47.619 0.00 0.00 0.00 2.85
4650 5007 4.511826 CGTTTTTCAGCTTCCTTCAGTACT 59.488 41.667 0.00 0.00 0.00 2.73
4687 5044 0.396811 CTTGTCCCGTCCACTTCCTT 59.603 55.000 0.00 0.00 0.00 3.36
4890 5250 2.704464 CATGGAGTGGAGAGATGCAA 57.296 50.000 0.00 0.00 0.00 4.08
4922 5282 4.081972 CAGGACTGATGCTAGTGTTGTACT 60.082 45.833 0.00 0.00 43.56 2.73
4924 5284 4.086457 TCAGGACTGATGCTAGTGTTGTA 58.914 43.478 0.00 0.00 34.14 2.41
4968 5328 3.058501 CCGGCGAGTCATTTAAAAGTTGT 60.059 43.478 9.30 0.00 0.00 3.32
4969 5329 3.058501 ACCGGCGAGTCATTTAAAAGTTG 60.059 43.478 9.30 0.00 0.00 3.16
5034 5398 3.061697 GGTATAGGAAAAACGCTGTGACG 59.938 47.826 0.00 0.00 39.50 4.35
5035 5399 3.061697 CGGTATAGGAAAAACGCTGTGAC 59.938 47.826 0.00 0.00 0.00 3.67
5036 5400 3.255725 CGGTATAGGAAAAACGCTGTGA 58.744 45.455 0.00 0.00 0.00 3.58
5037 5401 2.997986 ACGGTATAGGAAAAACGCTGTG 59.002 45.455 0.00 0.00 0.00 3.66
5038 5402 3.056322 AGACGGTATAGGAAAAACGCTGT 60.056 43.478 0.00 0.00 0.00 4.40
5039 5403 3.518590 AGACGGTATAGGAAAAACGCTG 58.481 45.455 0.00 0.00 0.00 5.18
5040 5404 3.881937 AGACGGTATAGGAAAAACGCT 57.118 42.857 0.00 0.00 0.00 5.07
5041 5405 5.284079 TGATAGACGGTATAGGAAAAACGC 58.716 41.667 0.00 0.00 0.00 4.84
5042 5406 6.976925 ACTTGATAGACGGTATAGGAAAAACG 59.023 38.462 0.00 0.00 0.00 3.60
5043 5407 9.242477 GTACTTGATAGACGGTATAGGAAAAAC 57.758 37.037 0.00 0.00 0.00 2.43
5053 5435 6.124340 TCTCATTGGTACTTGATAGACGGTA 58.876 40.000 0.00 0.00 0.00 4.02
5094 5476 4.098654 TGAATCCTCTCGATCAAGGACTTC 59.901 45.833 12.12 14.80 44.26 3.01
5242 5628 1.040339 TCCAGTGTGGGTTTTGGTGC 61.040 55.000 0.00 0.00 38.32 5.01
5301 5687 2.829914 GGCATGGGAGCATTGCGA 60.830 61.111 2.38 0.00 35.83 5.10
5302 5688 2.622903 CTTGGCATGGGAGCATTGCG 62.623 60.000 2.38 0.00 35.83 4.85
5326 5712 1.232119 GATCCACATCGCATGCATCA 58.768 50.000 19.57 0.28 0.00 3.07
5384 5771 0.459899 ATGAGATTCGCTACGTGGCA 59.540 50.000 24.15 5.47 0.00 4.92
5430 5817 1.448189 CTGCTCTGCTCTGCTGACC 60.448 63.158 0.00 0.00 33.27 4.02
5444 5831 1.291588 CTCCGTGACAAGCTCTGCT 59.708 57.895 0.00 0.00 42.56 4.24
5445 5832 1.739562 CCTCCGTGACAAGCTCTGC 60.740 63.158 0.00 0.00 0.00 4.26
5447 5834 1.758440 TTGCCTCCGTGACAAGCTCT 61.758 55.000 0.00 0.00 0.00 4.09
5448 5835 1.294659 CTTGCCTCCGTGACAAGCTC 61.295 60.000 0.00 0.00 34.90 4.09
5449 5836 1.302033 CTTGCCTCCGTGACAAGCT 60.302 57.895 0.00 0.00 34.90 3.74
5450 5837 3.257933 CTTGCCTCCGTGACAAGC 58.742 61.111 0.00 0.00 34.90 4.01
5451 5838 2.328099 GGCTTGCCTCCGTGACAAG 61.328 63.158 4.11 0.00 42.90 3.16
5452 5839 2.281484 GGCTTGCCTCCGTGACAA 60.281 61.111 4.11 0.00 0.00 3.18
5499 5886 3.117552 ACGGAGGGAGTAGGAAGAAAT 57.882 47.619 0.00 0.00 0.00 2.17
5502 5889 1.341778 GGAACGGAGGGAGTAGGAAGA 60.342 57.143 0.00 0.00 0.00 2.87
5503 5890 1.112950 GGAACGGAGGGAGTAGGAAG 58.887 60.000 0.00 0.00 0.00 3.46
5504 5891 3.294904 GGAACGGAGGGAGTAGGAA 57.705 57.895 0.00 0.00 0.00 3.36
5518 5905 8.718734 ACAAATCTAAGACAAGTAATTCGGAAC 58.281 33.333 0.00 0.00 0.00 3.62
5519 5906 8.842358 ACAAATCTAAGACAAGTAATTCGGAA 57.158 30.769 0.00 0.00 0.00 4.30
5520 5907 8.311836 AGACAAATCTAAGACAAGTAATTCGGA 58.688 33.333 0.00 0.00 31.46 4.55
5521 5908 8.480643 AGACAAATCTAAGACAAGTAATTCGG 57.519 34.615 0.00 0.00 31.46 4.30
5528 5915 8.407064 CCGTATCTAGACAAATCTAAGACAAGT 58.593 37.037 0.00 0.00 36.98 3.16
5529 5916 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
5530 5917 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
5531 5918 8.568794 CATCCGTATCTAGACAAATCTAAGACA 58.431 37.037 0.00 0.00 36.98 3.41
5532 5919 8.569641 ACATCCGTATCTAGACAAATCTAAGAC 58.430 37.037 0.00 0.00 36.98 3.01
5533 5920 8.693120 ACATCCGTATCTAGACAAATCTAAGA 57.307 34.615 0.00 0.00 36.98 2.10
5574 5961 9.788889 TCTTAGATTTGTCTAGATACGGATGTA 57.211 33.333 0.00 0.00 34.45 2.29
5575 5962 8.569641 GTCTTAGATTTGTCTAGATACGGATGT 58.430 37.037 0.00 0.00 0.00 3.06
5576 5963 8.568794 TGTCTTAGATTTGTCTAGATACGGATG 58.431 37.037 0.00 0.00 0.00 3.51
5577 5964 8.693120 TGTCTTAGATTTGTCTAGATACGGAT 57.307 34.615 0.00 0.00 0.00 4.18
5578 5965 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
5579 5966 8.407064 ACTTGTCTTAGATTTGTCTAGATACGG 58.593 37.037 0.00 0.00 0.00 4.02
5586 5973 9.582431 CCGAATTACTTGTCTTAGATTTGTCTA 57.418 33.333 0.00 0.00 0.00 2.59
5587 5974 8.311836 TCCGAATTACTTGTCTTAGATTTGTCT 58.688 33.333 0.00 0.00 0.00 3.41
5588 5975 8.475331 TCCGAATTACTTGTCTTAGATTTGTC 57.525 34.615 0.00 0.00 0.00 3.18
5589 5976 8.718734 GTTCCGAATTACTTGTCTTAGATTTGT 58.281 33.333 0.00 0.00 0.00 2.83
5590 5977 7.898309 CGTTCCGAATTACTTGTCTTAGATTTG 59.102 37.037 0.00 0.00 0.00 2.32
5591 5978 7.064253 CCGTTCCGAATTACTTGTCTTAGATTT 59.936 37.037 0.00 0.00 0.00 2.17
5592 5979 6.534079 CCGTTCCGAATTACTTGTCTTAGATT 59.466 38.462 0.00 0.00 0.00 2.40
5593 5980 6.040878 CCGTTCCGAATTACTTGTCTTAGAT 58.959 40.000 0.00 0.00 0.00 1.98
5594 5981 5.183713 TCCGTTCCGAATTACTTGTCTTAGA 59.816 40.000 0.00 0.00 0.00 2.10
5595 5982 5.404946 TCCGTTCCGAATTACTTGTCTTAG 58.595 41.667 0.00 0.00 0.00 2.18
5596 5983 5.389859 TCCGTTCCGAATTACTTGTCTTA 57.610 39.130 0.00 0.00 0.00 2.10
5597 5984 4.243270 CTCCGTTCCGAATTACTTGTCTT 58.757 43.478 0.00 0.00 0.00 3.01
5598 5985 3.368116 CCTCCGTTCCGAATTACTTGTCT 60.368 47.826 0.00 0.00 0.00 3.41
5599 5986 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
5600 5987 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
5601 5988 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
5602 5989 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
5603 5990 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
5604 5991 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
5605 5992 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
5606 5993 1.755380 CTACTCCCTCCGTTCCGAATT 59.245 52.381 0.00 0.00 0.00 2.17
5607 5994 1.400737 CTACTCCCTCCGTTCCGAAT 58.599 55.000 0.00 0.00 0.00 3.34
5608 5995 1.318158 GCTACTCCCTCCGTTCCGAA 61.318 60.000 0.00 0.00 0.00 4.30
5609 5996 1.751927 GCTACTCCCTCCGTTCCGA 60.752 63.158 0.00 0.00 0.00 4.55
5610 5997 1.726533 GAGCTACTCCCTCCGTTCCG 61.727 65.000 0.00 0.00 0.00 4.30
5611 5998 1.726533 CGAGCTACTCCCTCCGTTCC 61.727 65.000 0.00 0.00 0.00 3.62
5612 5999 1.726533 CCGAGCTACTCCCTCCGTTC 61.727 65.000 0.00 0.00 0.00 3.95
5613 6000 1.753463 CCGAGCTACTCCCTCCGTT 60.753 63.158 0.00 0.00 0.00 4.44
5614 6001 2.124236 CCGAGCTACTCCCTCCGT 60.124 66.667 0.00 0.00 0.00 4.69
5615 6002 1.448922 CTTCCGAGCTACTCCCTCCG 61.449 65.000 0.00 0.00 0.00 4.63
5616 6003 1.740332 GCTTCCGAGCTACTCCCTCC 61.740 65.000 0.00 0.00 45.65 4.30
5617 6004 1.737201 GCTTCCGAGCTACTCCCTC 59.263 63.158 0.00 0.00 45.65 4.30
5618 6005 3.942601 GCTTCCGAGCTACTCCCT 58.057 61.111 0.00 0.00 45.65 4.20
5634 6021 1.888512 TGGCTTCAAATCTTGGACTGC 59.111 47.619 0.00 0.00 0.00 4.40
5638 6025 1.745087 GCGATGGCTTCAAATCTTGGA 59.255 47.619 1.08 0.00 35.83 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.