Multiple sequence alignment - TraesCS2B01G170000
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G170000 | chr2B | 100.000 | 3675 | 0 | 0 | 1 | 3675 | 143001898 | 142998224 | 0.000000e+00 | 6787.0 |
1 | TraesCS2B01G170000 | chr2B | 89.229 | 1142 | 86 | 16 | 989 | 2117 | 170937712 | 170938829 | 0.000000e+00 | 1393.0 |
2 | TraesCS2B01G170000 | chr2B | 91.282 | 952 | 62 | 6 | 1186 | 2117 | 143133239 | 143132289 | 0.000000e+00 | 1279.0 |
3 | TraesCS2B01G170000 | chr2B | 85.082 | 610 | 48 | 23 | 2968 | 3555 | 143129084 | 143128496 | 1.900000e-162 | 582.0 |
4 | TraesCS2B01G170000 | chr2B | 80.000 | 485 | 34 | 26 | 2403 | 2871 | 143132101 | 143131664 | 2.150000e-77 | 300.0 |
5 | TraesCS2B01G170000 | chr2B | 86.697 | 218 | 14 | 8 | 407 | 612 | 143136101 | 143135887 | 1.030000e-55 | 228.0 |
6 | TraesCS2B01G170000 | chr2B | 89.744 | 78 | 6 | 1 | 598 | 675 | 170936855 | 170936930 | 8.400000e-17 | 99.0 |
7 | TraesCS2B01G170000 | chr2B | 81.395 | 129 | 10 | 3 | 2182 | 2310 | 143132255 | 143132141 | 3.910000e-15 | 93.5 |
8 | TraesCS2B01G170000 | chr2B | 100.000 | 35 | 0 | 0 | 948 | 982 | 170937654 | 170937688 | 8.520000e-07 | 65.8 |
9 | TraesCS2B01G170000 | chr2D | 91.298 | 2126 | 108 | 29 | 313 | 2401 | 90322818 | 90320733 | 0.000000e+00 | 2830.0 |
10 | TraesCS2B01G170000 | chr2D | 91.223 | 1128 | 79 | 8 | 1006 | 2117 | 118845141 | 118846264 | 0.000000e+00 | 1517.0 |
11 | TraesCS2B01G170000 | chr2D | 89.022 | 583 | 35 | 18 | 2959 | 3522 | 90312983 | 90312411 | 0.000000e+00 | 695.0 |
12 | TraesCS2B01G170000 | chr2D | 90.221 | 317 | 21 | 5 | 1 | 308 | 90323221 | 90322906 | 4.420000e-109 | 405.0 |
13 | TraesCS2B01G170000 | chr2D | 83.918 | 342 | 21 | 5 | 2522 | 2860 | 90320507 | 90320197 | 2.770000e-76 | 296.0 |
14 | TraesCS2B01G170000 | chr2D | 83.696 | 276 | 23 | 14 | 407 | 676 | 118844532 | 118844791 | 1.320000e-59 | 241.0 |
15 | TraesCS2B01G170000 | chr2D | 91.209 | 91 | 5 | 2 | 2870 | 2959 | 90313461 | 90313373 | 1.790000e-23 | 121.0 |
16 | TraesCS2B01G170000 | chr2A | 92.366 | 1585 | 83 | 22 | 837 | 2401 | 90069322 | 90067756 | 0.000000e+00 | 2222.0 |
17 | TraesCS2B01G170000 | chr2A | 90.218 | 1145 | 72 | 21 | 989 | 2117 | 120737544 | 120738664 | 0.000000e+00 | 1458.0 |
18 | TraesCS2B01G170000 | chr2A | 88.024 | 1144 | 80 | 22 | 989 | 2117 | 120753440 | 120754541 | 0.000000e+00 | 1301.0 |
19 | TraesCS2B01G170000 | chr2A | 90.441 | 952 | 70 | 7 | 1186 | 2117 | 90218617 | 90217667 | 0.000000e+00 | 1234.0 |
20 | TraesCS2B01G170000 | chr2A | 89.323 | 768 | 50 | 17 | 989 | 1744 | 120721841 | 120722588 | 0.000000e+00 | 935.0 |
21 | TraesCS2B01G170000 | chr2A | 89.845 | 581 | 43 | 7 | 1 | 568 | 90208795 | 90208218 | 0.000000e+00 | 732.0 |
22 | TraesCS2B01G170000 | chr2A | 82.578 | 861 | 87 | 32 | 2699 | 3526 | 90217163 | 90216333 | 0.000000e+00 | 701.0 |
23 | TraesCS2B01G170000 | chr2A | 83.784 | 407 | 45 | 12 | 1 | 404 | 339000775 | 339001163 | 2.090000e-97 | 366.0 |
24 | TraesCS2B01G170000 | chr2A | 82.314 | 458 | 44 | 19 | 2519 | 2959 | 90067503 | 90067066 | 2.700000e-96 | 363.0 |
25 | TraesCS2B01G170000 | chr2A | 86.420 | 324 | 35 | 7 | 88 | 403 | 169238075 | 169238397 | 2.720000e-91 | 346.0 |
26 | TraesCS2B01G170000 | chr2A | 86.466 | 266 | 19 | 6 | 598 | 847 | 90070740 | 90070476 | 3.620000e-70 | 276.0 |
27 | TraesCS2B01G170000 | chr2A | 85.000 | 280 | 21 | 9 | 407 | 682 | 90219460 | 90219198 | 7.830000e-67 | 265.0 |
28 | TraesCS2B01G170000 | chr2A | 91.463 | 164 | 9 | 4 | 3082 | 3243 | 90061960 | 90061800 | 1.720000e-53 | 220.0 |
29 | TraesCS2B01G170000 | chr2A | 94.574 | 129 | 7 | 0 | 2959 | 3087 | 90065474 | 90065346 | 2.240000e-47 | 200.0 |
30 | TraesCS2B01G170000 | chr2A | 90.780 | 141 | 9 | 3 | 409 | 549 | 120715951 | 120716087 | 6.270000e-43 | 185.0 |
31 | TraesCS2B01G170000 | chr2A | 91.129 | 124 | 7 | 2 | 2404 | 2523 | 90217463 | 90217340 | 8.160000e-37 | 165.0 |
32 | TraesCS2B01G170000 | chr2A | 90.244 | 123 | 9 | 3 | 2528 | 2650 | 90217281 | 90217162 | 1.370000e-34 | 158.0 |
33 | TraesCS2B01G170000 | chr2A | 83.146 | 89 | 9 | 1 | 2222 | 2310 | 90217604 | 90217522 | 3.940000e-10 | 76.8 |
34 | TraesCS2B01G170000 | chr3D | 88.627 | 976 | 78 | 17 | 1273 | 2238 | 442397509 | 442398461 | 0.000000e+00 | 1157.0 |
35 | TraesCS2B01G170000 | chr3D | 88.938 | 452 | 21 | 9 | 939 | 1379 | 442397080 | 442397513 | 6.990000e-147 | 531.0 |
36 | TraesCS2B01G170000 | chr1D | 83.130 | 409 | 54 | 11 | 2 | 403 | 221271560 | 221271960 | 3.490000e-95 | 359.0 |
37 | TraesCS2B01G170000 | chr5B | 82.725 | 411 | 59 | 7 | 1 | 403 | 348884336 | 348884742 | 4.510000e-94 | 355.0 |
38 | TraesCS2B01G170000 | chr5B | 87.324 | 71 | 9 | 0 | 3566 | 3636 | 67018010 | 67017940 | 8.460000e-12 | 82.4 |
39 | TraesCS2B01G170000 | chr1B | 82.544 | 401 | 56 | 8 | 10 | 403 | 317995164 | 317994771 | 1.260000e-89 | 340.0 |
40 | TraesCS2B01G170000 | chr1B | 91.026 | 78 | 7 | 0 | 3566 | 3643 | 636680972 | 636681049 | 5.020000e-19 | 106.0 |
41 | TraesCS2B01G170000 | chr1B | 89.744 | 78 | 8 | 0 | 3566 | 3643 | 636665448 | 636665525 | 2.340000e-17 | 100.0 |
42 | TraesCS2B01G170000 | chr5D | 82.195 | 410 | 49 | 12 | 1 | 403 | 511818714 | 511818322 | 7.610000e-87 | 331.0 |
43 | TraesCS2B01G170000 | chr7D | 82.238 | 411 | 46 | 12 | 1 | 404 | 637489602 | 637489212 | 2.740000e-86 | 329.0 |
44 | TraesCS2B01G170000 | chr7D | 82.134 | 403 | 45 | 16 | 1 | 396 | 637402610 | 637402228 | 1.650000e-83 | 320.0 |
45 | TraesCS2B01G170000 | chr7D | 82.552 | 384 | 41 | 11 | 28 | 404 | 637459583 | 637459219 | 7.660000e-82 | 315.0 |
46 | TraesCS2B01G170000 | chr7D | 90.062 | 161 | 8 | 5 | 451 | 607 | 89021336 | 89021180 | 6.220000e-48 | 202.0 |
47 | TraesCS2B01G170000 | chrUn | 82.552 | 384 | 41 | 11 | 28 | 404 | 422893048 | 422892684 | 7.660000e-82 | 315.0 |
48 | TraesCS2B01G170000 | chr7A | 80.815 | 417 | 47 | 16 | 1 | 404 | 728181907 | 728181511 | 2.770000e-76 | 296.0 |
49 | TraesCS2B01G170000 | chr7A | 80.815 | 417 | 47 | 16 | 1 | 404 | 728212870 | 728212474 | 2.770000e-76 | 296.0 |
50 | TraesCS2B01G170000 | chr7A | 90.090 | 111 | 9 | 2 | 3566 | 3675 | 669494533 | 669494642 | 3.830000e-30 | 143.0 |
51 | TraesCS2B01G170000 | chr7A | 76.000 | 250 | 27 | 18 | 1 | 240 | 728152679 | 728152453 | 8.400000e-17 | 99.0 |
52 | TraesCS2B01G170000 | chr3A | 96.552 | 145 | 5 | 0 | 939 | 1083 | 583702734 | 583702878 | 1.320000e-59 | 241.0 |
53 | TraesCS2B01G170000 | chr6D | 82.673 | 202 | 22 | 7 | 2169 | 2362 | 10517400 | 10517596 | 2.270000e-37 | 167.0 |
54 | TraesCS2B01G170000 | chr1A | 89.744 | 78 | 8 | 0 | 3566 | 3643 | 553907440 | 553907517 | 2.340000e-17 | 100.0 |
55 | TraesCS2B01G170000 | chr1A | 92.000 | 50 | 4 | 0 | 3566 | 3615 | 553933304 | 553933353 | 1.830000e-08 | 71.3 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G170000 | chr2B | 142998224 | 143001898 | 3674 | True | 6787.000000 | 6787 | 100.000000 | 1 | 3675 | 1 | chr2B.!!$R1 | 3674 |
1 | TraesCS2B01G170000 | chr2B | 170936855 | 170938829 | 1974 | False | 519.266667 | 1393 | 92.991000 | 598 | 2117 | 3 | chr2B.!!$F1 | 1519 |
2 | TraesCS2B01G170000 | chr2B | 143128496 | 143136101 | 7605 | True | 496.500000 | 1279 | 84.891200 | 407 | 3555 | 5 | chr2B.!!$R2 | 3148 |
3 | TraesCS2B01G170000 | chr2D | 90320197 | 90323221 | 3024 | True | 1177.000000 | 2830 | 88.479000 | 1 | 2860 | 3 | chr2D.!!$R2 | 2859 |
4 | TraesCS2B01G170000 | chr2D | 118844532 | 118846264 | 1732 | False | 879.000000 | 1517 | 87.459500 | 407 | 2117 | 2 | chr2D.!!$F1 | 1710 |
5 | TraesCS2B01G170000 | chr2D | 90312411 | 90313461 | 1050 | True | 408.000000 | 695 | 90.115500 | 2870 | 3522 | 2 | chr2D.!!$R1 | 652 |
6 | TraesCS2B01G170000 | chr2A | 120737544 | 120738664 | 1120 | False | 1458.000000 | 1458 | 90.218000 | 989 | 2117 | 1 | chr2A.!!$F3 | 1128 |
7 | TraesCS2B01G170000 | chr2A | 120753440 | 120754541 | 1101 | False | 1301.000000 | 1301 | 88.024000 | 989 | 2117 | 1 | chr2A.!!$F4 | 1128 |
8 | TraesCS2B01G170000 | chr2A | 120721841 | 120722588 | 747 | False | 935.000000 | 935 | 89.323000 | 989 | 1744 | 1 | chr2A.!!$F2 | 755 |
9 | TraesCS2B01G170000 | chr2A | 90208218 | 90208795 | 577 | True | 732.000000 | 732 | 89.845000 | 1 | 568 | 1 | chr2A.!!$R1 | 567 |
10 | TraesCS2B01G170000 | chr2A | 90061800 | 90070740 | 8940 | True | 656.200000 | 2222 | 89.436600 | 598 | 3243 | 5 | chr2A.!!$R2 | 2645 |
11 | TraesCS2B01G170000 | chr2A | 90216333 | 90219460 | 3127 | True | 433.300000 | 1234 | 87.089667 | 407 | 3526 | 6 | chr2A.!!$R3 | 3119 |
12 | TraesCS2B01G170000 | chr3D | 442397080 | 442398461 | 1381 | False | 844.000000 | 1157 | 88.782500 | 939 | 2238 | 2 | chr3D.!!$F1 | 1299 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
920 | 4395 | 0.250727 | TCTCCCCCACTGCTTTTTCG | 60.251 | 55.0 | 0.0 | 0.0 | 0.0 | 3.46 | F |
1250 | 4861 | 0.467290 | CTTCCTCCTCCTCCTCCTCG | 60.467 | 65.0 | 0.0 | 0.0 | 0.0 | 4.63 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2120 | 5872 | 0.033228 | GAGACAGTGCAGTGTGCTCT | 59.967 | 55.0 | 31.24 | 21.24 | 46.71 | 4.09 | R |
2681 | 6621 | 0.108329 | GCTCGTTCCTGGATTCCGAA | 60.108 | 55.0 | 12.60 | 0.00 | 0.00 | 4.30 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
21 | 22 | 1.176527 | CATCACCATCCACCACAACC | 58.823 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
26 | 27 | 2.530661 | ATCCACCACAACCCCGGA | 60.531 | 61.111 | 0.73 | 0.00 | 0.00 | 5.14 |
27 | 28 | 2.902457 | ATCCACCACAACCCCGGAC | 61.902 | 63.158 | 0.73 | 0.00 | 0.00 | 4.79 |
28 | 29 | 3.879885 | CCACCACAACCCCGGACA | 61.880 | 66.667 | 0.73 | 0.00 | 0.00 | 4.02 |
29 | 30 | 2.281484 | CACCACAACCCCGGACAG | 60.281 | 66.667 | 0.73 | 0.00 | 0.00 | 3.51 |
74 | 75 | 1.613630 | GAGGCCTCTCCCTCCACAA | 60.614 | 63.158 | 26.25 | 0.00 | 44.60 | 3.33 |
169 | 178 | 3.133464 | CGTGCCGATGCCCATGTT | 61.133 | 61.111 | 0.00 | 0.00 | 36.33 | 2.71 |
181 | 190 | 1.202746 | GCCCATGTTCATCTCCCTCTC | 60.203 | 57.143 | 0.00 | 0.00 | 0.00 | 3.20 |
183 | 192 | 2.121948 | CCATGTTCATCTCCCTCTCCA | 58.878 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
200 | 209 | 3.207549 | TCTCCATCTCCATCCTCACCTAA | 59.792 | 47.826 | 0.00 | 0.00 | 0.00 | 2.69 |
255 | 265 | 8.294577 | TCAATGAATCATTCTTCTTTGTGTCAG | 58.705 | 33.333 | 5.36 | 0.00 | 39.47 | 3.51 |
280 | 290 | 9.458727 | AGTTCATCTATGTTTGAGTGATTGATT | 57.541 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
328 | 421 | 6.882610 | ACTATGCAAAATCAGTCTTTGTGA | 57.117 | 33.333 | 0.00 | 0.00 | 36.38 | 3.58 |
356 | 449 | 4.735985 | TCTAGTATTTACTCGCGTTGCAA | 58.264 | 39.130 | 5.77 | 0.00 | 37.73 | 4.08 |
362 | 455 | 6.753279 | AGTATTTACTCGCGTTGCAAGTAATA | 59.247 | 34.615 | 15.43 | 8.98 | 0.00 | 0.98 |
367 | 460 | 3.263261 | TCGCGTTGCAAGTAATATTGGA | 58.737 | 40.909 | 5.77 | 0.00 | 0.00 | 3.53 |
390 | 483 | 4.310769 | AGACGTCCTTTCTTGTGATCTTG | 58.689 | 43.478 | 13.01 | 0.00 | 0.00 | 3.02 |
418 | 511 | 7.354751 | TCACATGCACTAACATAGGTGTATA | 57.645 | 36.000 | 0.00 | 0.00 | 37.67 | 1.47 |
635 | 750 | 1.055849 | AAGGGTTGGGTCAATTTGGC | 58.944 | 50.000 | 0.00 | 0.00 | 0.00 | 4.52 |
637 | 752 | 1.374125 | GGTTGGGTCAATTTGGCGC | 60.374 | 57.895 | 10.81 | 10.81 | 35.31 | 6.53 |
692 | 814 | 6.031751 | TGGTTCGGGGAAATTAAAATTCTG | 57.968 | 37.500 | 4.86 | 0.00 | 0.00 | 3.02 |
754 | 2635 | 4.132336 | TGCTCATGATGCAGTAGATTTCC | 58.868 | 43.478 | 13.62 | 0.00 | 35.31 | 3.13 |
782 | 2663 | 7.761651 | AATCTTCAGTGTTTTTCTTTTCTGC | 57.238 | 32.000 | 0.00 | 0.00 | 0.00 | 4.26 |
849 | 3908 | 5.335127 | CAAAATGCATGTAGTAGTTGGCTC | 58.665 | 41.667 | 0.00 | 0.00 | 0.00 | 4.70 |
909 | 4384 | 2.596851 | GCAGCAAGTCTCTCCCCCA | 61.597 | 63.158 | 0.00 | 0.00 | 0.00 | 4.96 |
920 | 4395 | 0.250727 | TCTCCCCCACTGCTTTTTCG | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
1106 | 4686 | 2.650778 | GCCTTGCCTTTGGGAACG | 59.349 | 61.111 | 0.00 | 0.00 | 33.58 | 3.95 |
1107 | 4687 | 2.650778 | CCTTGCCTTTGGGAACGC | 59.349 | 61.111 | 0.00 | 0.00 | 33.58 | 4.84 |
1250 | 4861 | 0.467290 | CTTCCTCCTCCTCCTCCTCG | 60.467 | 65.000 | 0.00 | 0.00 | 0.00 | 4.63 |
1253 | 4864 | 1.525077 | CTCCTCCTCCTCCTCGTCG | 60.525 | 68.421 | 0.00 | 0.00 | 0.00 | 5.12 |
1313 | 5047 | 2.877691 | GCGTCATCCCCACTTTGC | 59.122 | 61.111 | 0.00 | 0.00 | 0.00 | 3.68 |
1705 | 5439 | 2.810887 | GCAGACGCGCTCATCACA | 60.811 | 61.111 | 5.73 | 0.00 | 0.00 | 3.58 |
2122 | 5874 | 4.074526 | GGTGAGCAGAGCGCCAGA | 62.075 | 66.667 | 2.29 | 0.00 | 44.04 | 3.86 |
2123 | 5875 | 2.508887 | GTGAGCAGAGCGCCAGAG | 60.509 | 66.667 | 2.29 | 0.00 | 44.04 | 3.35 |
2124 | 5876 | 4.447989 | TGAGCAGAGCGCCAGAGC | 62.448 | 66.667 | 2.29 | 3.27 | 44.04 | 4.09 |
2167 | 5931 | 5.254901 | TCCTCTTCTTCTTCGCTAAGTACT | 58.745 | 41.667 | 0.00 | 0.00 | 34.13 | 2.73 |
2170 | 5934 | 6.093771 | CCTCTTCTTCTTCGCTAAGTACTGTA | 59.906 | 42.308 | 0.00 | 0.00 | 34.13 | 2.74 |
2176 | 5940 | 6.754702 | TCTTCGCTAAGTACTGTAGAACAT | 57.245 | 37.500 | 13.17 | 0.00 | 34.13 | 2.71 |
2180 | 5944 | 7.621428 | TCGCTAAGTACTGTAGAACATAGTT | 57.379 | 36.000 | 13.17 | 0.00 | 30.25 | 2.24 |
2208 | 5972 | 9.123902 | TGGAAAATATTTTGATCTGATCACGAT | 57.876 | 29.630 | 19.41 | 16.90 | 39.39 | 3.73 |
2209 | 5973 | 9.390795 | GGAAAATATTTTGATCTGATCACGATG | 57.609 | 33.333 | 19.41 | 0.00 | 39.39 | 3.84 |
2210 | 5974 | 9.390795 | GAAAATATTTTGATCTGATCACGATGG | 57.609 | 33.333 | 19.41 | 0.00 | 39.39 | 3.51 |
2211 | 5975 | 8.681486 | AAATATTTTGATCTGATCACGATGGA | 57.319 | 30.769 | 19.41 | 1.70 | 39.39 | 3.41 |
2212 | 5976 | 8.681486 | AATATTTTGATCTGATCACGATGGAA | 57.319 | 30.769 | 19.41 | 7.83 | 39.39 | 3.53 |
2238 | 6002 | 0.529378 | CAATGGCTGCAGGGAAGTTC | 59.471 | 55.000 | 17.12 | 0.00 | 0.00 | 3.01 |
2255 | 6019 | 3.338249 | AGTTCATGAACGATCACCCTTG | 58.662 | 45.455 | 28.18 | 0.00 | 45.50 | 3.61 |
2257 | 6021 | 1.278985 | TCATGAACGATCACCCTTGCT | 59.721 | 47.619 | 0.00 | 0.00 | 38.69 | 3.91 |
2259 | 6023 | 1.522668 | TGAACGATCACCCTTGCTTG | 58.477 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
2328 | 6092 | 0.620556 | ACGTGCTGATTGAGGGGATT | 59.379 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2401 | 6165 | 3.067180 | GCCAGTAGCAGGTACGTACAATA | 59.933 | 47.826 | 26.02 | 10.46 | 42.97 | 1.90 |
2445 | 6295 | 3.870274 | TGTGCCAAGAGATGATCTGAAG | 58.130 | 45.455 | 0.00 | 0.00 | 38.67 | 3.02 |
2455 | 6305 | 5.840149 | AGAGATGATCTGAAGCTCCTATGTT | 59.160 | 40.000 | 0.00 | 0.00 | 36.69 | 2.71 |
2458 | 6309 | 6.766944 | AGATGATCTGAAGCTCCTATGTTTTG | 59.233 | 38.462 | 0.00 | 0.00 | 0.00 | 2.44 |
2516 | 6370 | 0.601046 | TTGCTCGTCTCCTTGCAGTG | 60.601 | 55.000 | 0.00 | 0.00 | 36.75 | 3.66 |
2540 | 6477 | 3.054434 | CAGGGTGATGGACTGATGGTTTA | 60.054 | 47.826 | 0.00 | 0.00 | 34.21 | 2.01 |
2542 | 6479 | 3.947834 | GGGTGATGGACTGATGGTTTAAG | 59.052 | 47.826 | 0.00 | 0.00 | 0.00 | 1.85 |
2648 | 6588 | 2.415491 | CGTGCACTAAGTAGTAGCAGCA | 60.415 | 50.000 | 16.19 | 6.51 | 40.12 | 4.41 |
2649 | 6589 | 3.182967 | GTGCACTAAGTAGTAGCAGCAG | 58.817 | 50.000 | 10.32 | 0.00 | 41.89 | 4.24 |
2650 | 6590 | 2.826128 | TGCACTAAGTAGTAGCAGCAGT | 59.174 | 45.455 | 0.00 | 0.00 | 38.52 | 4.40 |
2651 | 6591 | 4.014406 | TGCACTAAGTAGTAGCAGCAGTA | 58.986 | 43.478 | 0.00 | 0.00 | 38.52 | 2.74 |
2652 | 6592 | 4.142447 | TGCACTAAGTAGTAGCAGCAGTAC | 60.142 | 45.833 | 0.00 | 0.00 | 38.52 | 2.73 |
2653 | 6593 | 4.734108 | GCACTAAGTAGTAGCAGCAGTACC | 60.734 | 50.000 | 0.00 | 0.00 | 35.36 | 3.34 |
2654 | 6594 | 3.626670 | ACTAAGTAGTAGCAGCAGTACCG | 59.373 | 47.826 | 0.00 | 0.00 | 34.13 | 4.02 |
2655 | 6595 | 2.414994 | AGTAGTAGCAGCAGTACCGA | 57.585 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
2656 | 6596 | 2.015587 | AGTAGTAGCAGCAGTACCGAC | 58.984 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
2657 | 6597 | 2.015587 | GTAGTAGCAGCAGTACCGACT | 58.984 | 52.381 | 0.00 | 0.00 | 35.80 | 4.18 |
2658 | 6598 | 1.096416 | AGTAGCAGCAGTACCGACTC | 58.904 | 55.000 | 0.00 | 0.00 | 31.73 | 3.36 |
2659 | 6599 | 1.096416 | GTAGCAGCAGTACCGACTCT | 58.904 | 55.000 | 0.00 | 0.00 | 31.73 | 3.24 |
2660 | 6600 | 1.064357 | GTAGCAGCAGTACCGACTCTC | 59.936 | 57.143 | 0.00 | 0.00 | 31.73 | 3.20 |
2661 | 6601 | 1.139947 | GCAGCAGTACCGACTCTCC | 59.860 | 63.158 | 0.00 | 0.00 | 31.73 | 3.71 |
2662 | 6602 | 1.595993 | GCAGCAGTACCGACTCTCCA | 61.596 | 60.000 | 0.00 | 0.00 | 31.73 | 3.86 |
2663 | 6603 | 0.453793 | CAGCAGTACCGACTCTCCAG | 59.546 | 60.000 | 0.00 | 0.00 | 31.73 | 3.86 |
2664 | 6604 | 0.038455 | AGCAGTACCGACTCTCCAGT | 59.962 | 55.000 | 0.00 | 0.00 | 31.73 | 4.00 |
2665 | 6605 | 0.452585 | GCAGTACCGACTCTCCAGTC | 59.547 | 60.000 | 0.00 | 0.00 | 45.19 | 3.51 |
2666 | 6606 | 1.951424 | GCAGTACCGACTCTCCAGTCT | 60.951 | 57.143 | 0.90 | 0.00 | 46.31 | 3.24 |
2667 | 6607 | 2.438411 | CAGTACCGACTCTCCAGTCTT | 58.562 | 52.381 | 0.90 | 0.00 | 46.31 | 3.01 |
2668 | 6608 | 2.162608 | CAGTACCGACTCTCCAGTCTTG | 59.837 | 54.545 | 0.90 | 0.00 | 46.31 | 3.02 |
2669 | 6609 | 2.040012 | AGTACCGACTCTCCAGTCTTGA | 59.960 | 50.000 | 0.90 | 0.00 | 46.31 | 3.02 |
2670 | 6610 | 2.223803 | ACCGACTCTCCAGTCTTGAT | 57.776 | 50.000 | 0.90 | 0.00 | 46.31 | 2.57 |
2671 | 6611 | 1.821753 | ACCGACTCTCCAGTCTTGATG | 59.178 | 52.381 | 0.90 | 0.00 | 46.31 | 3.07 |
2672 | 6612 | 1.470632 | CCGACTCTCCAGTCTTGATGC | 60.471 | 57.143 | 0.90 | 0.00 | 46.31 | 3.91 |
2673 | 6613 | 1.476085 | CGACTCTCCAGTCTTGATGCT | 59.524 | 52.381 | 0.90 | 0.00 | 46.31 | 3.79 |
2674 | 6614 | 2.734809 | CGACTCTCCAGTCTTGATGCTG | 60.735 | 54.545 | 0.90 | 0.00 | 46.31 | 4.41 |
2675 | 6615 | 1.066286 | ACTCTCCAGTCTTGATGCTGC | 60.066 | 52.381 | 0.00 | 0.00 | 0.00 | 5.25 |
2676 | 6616 | 0.251354 | TCTCCAGTCTTGATGCTGCC | 59.749 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2677 | 6617 | 1.078918 | TCCAGTCTTGATGCTGCCG | 60.079 | 57.895 | 0.00 | 0.00 | 0.00 | 5.69 |
2678 | 6618 | 2.110967 | CCAGTCTTGATGCTGCCGG | 61.111 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
2679 | 6619 | 1.376424 | CAGTCTTGATGCTGCCGGT | 60.376 | 57.895 | 1.90 | 0.00 | 0.00 | 5.28 |
2680 | 6620 | 0.957395 | CAGTCTTGATGCTGCCGGTT | 60.957 | 55.000 | 1.90 | 0.00 | 0.00 | 4.44 |
2681 | 6621 | 0.250901 | AGTCTTGATGCTGCCGGTTT | 60.251 | 50.000 | 1.90 | 0.00 | 0.00 | 3.27 |
2682 | 6622 | 0.598065 | GTCTTGATGCTGCCGGTTTT | 59.402 | 50.000 | 1.90 | 0.00 | 0.00 | 2.43 |
2683 | 6623 | 0.881118 | TCTTGATGCTGCCGGTTTTC | 59.119 | 50.000 | 1.90 | 0.00 | 0.00 | 2.29 |
2684 | 6624 | 0.454957 | CTTGATGCTGCCGGTTTTCG | 60.455 | 55.000 | 1.90 | 0.00 | 38.88 | 3.46 |
2694 | 6634 | 3.543884 | CGGTTTTCGGAATCCAGGA | 57.456 | 52.632 | 0.00 | 0.00 | 34.75 | 3.86 |
2695 | 6635 | 1.816074 | CGGTTTTCGGAATCCAGGAA | 58.184 | 50.000 | 0.00 | 0.00 | 34.75 | 3.36 |
2696 | 6636 | 1.467342 | CGGTTTTCGGAATCCAGGAAC | 59.533 | 52.381 | 0.00 | 0.25 | 34.75 | 3.62 |
2697 | 6637 | 1.467342 | GGTTTTCGGAATCCAGGAACG | 59.533 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
2702 | 6704 | 1.084370 | CGGAATCCAGGAACGAGCAC | 61.084 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2704 | 6706 | 0.744771 | GAATCCAGGAACGAGCACCC | 60.745 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2740 | 6742 | 1.718396 | TTCGTGCTTGCAGATCTCTG | 58.282 | 50.000 | 2.75 | 2.75 | 46.40 | 3.35 |
2742 | 6744 | 1.479730 | TCGTGCTTGCAGATCTCTGAT | 59.520 | 47.619 | 11.34 | 0.00 | 46.59 | 2.90 |
2743 | 6745 | 1.859703 | CGTGCTTGCAGATCTCTGATC | 59.140 | 52.381 | 11.34 | 0.00 | 46.59 | 2.92 |
2744 | 6746 | 2.481622 | CGTGCTTGCAGATCTCTGATCT | 60.482 | 50.000 | 11.34 | 0.69 | 46.59 | 2.75 |
2745 | 6747 | 3.125316 | GTGCTTGCAGATCTCTGATCTC | 58.875 | 50.000 | 11.34 | 0.10 | 46.59 | 2.75 |
2746 | 6748 | 3.032459 | TGCTTGCAGATCTCTGATCTCT | 58.968 | 45.455 | 11.34 | 0.00 | 46.59 | 3.10 |
2897 | 6937 | 4.953579 | TGTTATGGGCTCCAAAACTTATCC | 59.046 | 41.667 | 0.00 | 0.00 | 36.95 | 2.59 |
3002 | 11148 | 7.594015 | GCTATTCACAGGCAATTATGATGAAAG | 59.406 | 37.037 | 0.00 | 0.00 | 0.00 | 2.62 |
3109 | 14648 | 5.241949 | TCACATGTTACCGGCTTTAAAACAT | 59.758 | 36.000 | 0.00 | 5.74 | 40.44 | 2.71 |
3110 | 14649 | 6.430308 | TCACATGTTACCGGCTTTAAAACATA | 59.570 | 34.615 | 0.00 | 0.00 | 38.39 | 2.29 |
3111 | 14650 | 7.040617 | TCACATGTTACCGGCTTTAAAACATAA | 60.041 | 33.333 | 0.00 | 0.00 | 38.39 | 1.90 |
3146 | 14686 | 1.885560 | TACGCCAGCTTGTTTTAGCA | 58.114 | 45.000 | 0.00 | 0.00 | 43.68 | 3.49 |
3246 | 14786 | 5.277058 | GCCGTATGACATGTCTCAAATCTTC | 60.277 | 44.000 | 25.55 | 4.48 | 0.00 | 2.87 |
3271 | 14818 | 8.455682 | TCTTTTGTTCAGATTGTTAACTCGTTT | 58.544 | 29.630 | 7.22 | 0.00 | 0.00 | 3.60 |
3293 | 14840 | 9.337091 | CGTTTGTCTTGGAAATTTATAATTCGT | 57.663 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
3385 | 14943 | 3.138468 | AGCCAAAACCCTCTCTGTTTAGT | 59.862 | 43.478 | 0.00 | 0.00 | 34.97 | 2.24 |
3466 | 15034 | 3.557207 | CAGTCCAGCACTGCAAAAC | 57.443 | 52.632 | 3.30 | 0.00 | 46.30 | 2.43 |
3471 | 15039 | 1.364901 | CAGCACTGCAAAACCCCAG | 59.635 | 57.895 | 3.30 | 0.00 | 35.26 | 4.45 |
3479 | 15047 | 0.758734 | GCAAAACCCCAGCCTTTTCT | 59.241 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3499 | 15067 | 3.141488 | CCCGTCCACTCTCCTCCG | 61.141 | 72.222 | 0.00 | 0.00 | 0.00 | 4.63 |
3500 | 15068 | 2.045242 | CCGTCCACTCTCCTCCGA | 60.045 | 66.667 | 0.00 | 0.00 | 0.00 | 4.55 |
3526 | 15097 | 1.001764 | CCAATCCTGCAGCTCCACA | 60.002 | 57.895 | 8.66 | 0.00 | 0.00 | 4.17 |
3527 | 15098 | 0.609957 | CCAATCCTGCAGCTCCACAA | 60.610 | 55.000 | 8.66 | 0.00 | 0.00 | 3.33 |
3528 | 15099 | 0.524862 | CAATCCTGCAGCTCCACAAC | 59.475 | 55.000 | 8.66 | 0.00 | 0.00 | 3.32 |
3530 | 15101 | 0.035630 | ATCCTGCAGCTCCACAACTC | 60.036 | 55.000 | 8.66 | 0.00 | 0.00 | 3.01 |
3531 | 15102 | 1.071987 | CCTGCAGCTCCACAACTCA | 59.928 | 57.895 | 8.66 | 0.00 | 0.00 | 3.41 |
3532 | 15103 | 0.535780 | CCTGCAGCTCCACAACTCAA | 60.536 | 55.000 | 8.66 | 0.00 | 0.00 | 3.02 |
3560 | 15131 | 4.882671 | AAAAACTATGCAGCCTGATACG | 57.117 | 40.909 | 0.00 | 0.00 | 0.00 | 3.06 |
3561 | 15132 | 2.533266 | AACTATGCAGCCTGATACGG | 57.467 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3562 | 15133 | 1.414158 | ACTATGCAGCCTGATACGGT | 58.586 | 50.000 | 0.00 | 0.00 | 0.00 | 4.83 |
3563 | 15134 | 2.594131 | ACTATGCAGCCTGATACGGTA | 58.406 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
3564 | 15135 | 2.296471 | ACTATGCAGCCTGATACGGTAC | 59.704 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
3565 | 15136 | 1.414158 | ATGCAGCCTGATACGGTACT | 58.586 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
3566 | 15137 | 0.459899 | TGCAGCCTGATACGGTACTG | 59.540 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
3567 | 15138 | 0.460311 | GCAGCCTGATACGGTACTGT | 59.540 | 55.000 | 12.92 | 12.92 | 0.00 | 3.55 |
3568 | 15139 | 1.134788 | GCAGCCTGATACGGTACTGTT | 60.135 | 52.381 | 13.66 | 0.79 | 0.00 | 3.16 |
3569 | 15140 | 2.810650 | CAGCCTGATACGGTACTGTTC | 58.189 | 52.381 | 13.66 | 10.73 | 0.00 | 3.18 |
3570 | 15141 | 2.427453 | CAGCCTGATACGGTACTGTTCT | 59.573 | 50.000 | 13.66 | 0.61 | 0.00 | 3.01 |
3571 | 15142 | 3.630769 | CAGCCTGATACGGTACTGTTCTA | 59.369 | 47.826 | 13.66 | 0.00 | 0.00 | 2.10 |
3572 | 15143 | 4.097437 | CAGCCTGATACGGTACTGTTCTAA | 59.903 | 45.833 | 13.66 | 0.00 | 0.00 | 2.10 |
3573 | 15144 | 4.708421 | AGCCTGATACGGTACTGTTCTAAA | 59.292 | 41.667 | 13.66 | 0.00 | 0.00 | 1.85 |
3574 | 15145 | 5.041940 | GCCTGATACGGTACTGTTCTAAAG | 58.958 | 45.833 | 13.66 | 4.46 | 0.00 | 1.85 |
3575 | 15146 | 5.393896 | GCCTGATACGGTACTGTTCTAAAGT | 60.394 | 44.000 | 13.66 | 0.00 | 0.00 | 2.66 |
3576 | 15147 | 6.628185 | CCTGATACGGTACTGTTCTAAAGTT | 58.372 | 40.000 | 13.66 | 0.00 | 0.00 | 2.66 |
3577 | 15148 | 6.750963 | CCTGATACGGTACTGTTCTAAAGTTC | 59.249 | 42.308 | 13.66 | 0.00 | 0.00 | 3.01 |
3578 | 15149 | 7.218228 | TGATACGGTACTGTTCTAAAGTTCA | 57.782 | 36.000 | 13.66 | 1.83 | 0.00 | 3.18 |
3579 | 15150 | 7.833786 | TGATACGGTACTGTTCTAAAGTTCAT | 58.166 | 34.615 | 13.66 | 0.00 | 0.00 | 2.57 |
3580 | 15151 | 8.308931 | TGATACGGTACTGTTCTAAAGTTCATT | 58.691 | 33.333 | 13.66 | 0.00 | 0.00 | 2.57 |
3581 | 15152 | 8.699283 | ATACGGTACTGTTCTAAAGTTCATTC | 57.301 | 34.615 | 13.66 | 0.00 | 0.00 | 2.67 |
3582 | 15153 | 5.632347 | ACGGTACTGTTCTAAAGTTCATTCG | 59.368 | 40.000 | 0.04 | 0.00 | 0.00 | 3.34 |
3583 | 15154 | 5.860182 | CGGTACTGTTCTAAAGTTCATTCGA | 59.140 | 40.000 | 0.00 | 0.00 | 0.00 | 3.71 |
3584 | 15155 | 6.364165 | CGGTACTGTTCTAAAGTTCATTCGAA | 59.636 | 38.462 | 0.00 | 0.00 | 0.00 | 3.71 |
3585 | 15156 | 7.063074 | CGGTACTGTTCTAAAGTTCATTCGAAT | 59.937 | 37.037 | 4.39 | 4.39 | 32.61 | 3.34 |
3586 | 15157 | 8.169268 | GGTACTGTTCTAAAGTTCATTCGAATG | 58.831 | 37.037 | 28.48 | 28.48 | 37.75 | 2.67 |
3587 | 15158 | 7.133891 | ACTGTTCTAAAGTTCATTCGAATGG | 57.866 | 36.000 | 32.03 | 17.41 | 37.03 | 3.16 |
3588 | 15159 | 6.934645 | ACTGTTCTAAAGTTCATTCGAATGGA | 59.065 | 34.615 | 32.03 | 24.76 | 37.03 | 3.41 |
3589 | 15160 | 7.095187 | ACTGTTCTAAAGTTCATTCGAATGGAC | 60.095 | 37.037 | 33.38 | 33.38 | 43.80 | 4.02 |
3596 | 15167 | 5.957910 | GTTCATTCGAATGGACTGACTAG | 57.042 | 43.478 | 33.17 | 9.80 | 40.92 | 2.57 |
3597 | 15168 | 4.046938 | TCATTCGAATGGACTGACTAGC | 57.953 | 45.455 | 32.03 | 0.00 | 37.03 | 3.42 |
3598 | 15169 | 3.701542 | TCATTCGAATGGACTGACTAGCT | 59.298 | 43.478 | 32.03 | 0.00 | 37.03 | 3.32 |
3599 | 15170 | 4.887655 | TCATTCGAATGGACTGACTAGCTA | 59.112 | 41.667 | 32.03 | 10.19 | 37.03 | 3.32 |
3600 | 15171 | 5.359860 | TCATTCGAATGGACTGACTAGCTAA | 59.640 | 40.000 | 32.03 | 9.79 | 37.03 | 3.09 |
3601 | 15172 | 4.902443 | TCGAATGGACTGACTAGCTAAG | 57.098 | 45.455 | 0.00 | 0.00 | 0.00 | 2.18 |
3602 | 15173 | 3.066900 | TCGAATGGACTGACTAGCTAAGC | 59.933 | 47.826 | 0.00 | 0.00 | 0.00 | 3.09 |
3603 | 15174 | 3.181486 | CGAATGGACTGACTAGCTAAGCA | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 3.91 |
3604 | 15175 | 4.500545 | CGAATGGACTGACTAGCTAAGCAT | 60.501 | 45.833 | 0.00 | 0.00 | 0.00 | 3.79 |
3605 | 15176 | 5.363939 | GAATGGACTGACTAGCTAAGCATT | 58.636 | 41.667 | 0.00 | 0.00 | 0.00 | 3.56 |
3606 | 15177 | 4.392921 | TGGACTGACTAGCTAAGCATTC | 57.607 | 45.455 | 0.00 | 0.06 | 0.00 | 2.67 |
3607 | 15178 | 3.769300 | TGGACTGACTAGCTAAGCATTCA | 59.231 | 43.478 | 12.09 | 3.28 | 0.00 | 2.57 |
3608 | 15179 | 4.116238 | GGACTGACTAGCTAAGCATTCAC | 58.884 | 47.826 | 12.09 | 2.70 | 0.00 | 3.18 |
3609 | 15180 | 4.142049 | GGACTGACTAGCTAAGCATTCACT | 60.142 | 45.833 | 12.09 | 0.00 | 0.00 | 3.41 |
3610 | 15181 | 5.067936 | GGACTGACTAGCTAAGCATTCACTA | 59.932 | 44.000 | 12.09 | 0.00 | 0.00 | 2.74 |
3611 | 15182 | 5.897050 | ACTGACTAGCTAAGCATTCACTAC | 58.103 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
3612 | 15183 | 5.419155 | ACTGACTAGCTAAGCATTCACTACA | 59.581 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
3613 | 15184 | 6.071334 | ACTGACTAGCTAAGCATTCACTACAA | 60.071 | 38.462 | 0.00 | 0.00 | 0.00 | 2.41 |
3614 | 15185 | 6.100004 | TGACTAGCTAAGCATTCACTACAAC | 58.900 | 40.000 | 0.00 | 0.00 | 0.00 | 3.32 |
3615 | 15186 | 6.037786 | ACTAGCTAAGCATTCACTACAACA | 57.962 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
3616 | 15187 | 6.102663 | ACTAGCTAAGCATTCACTACAACAG | 58.897 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3617 | 15188 | 5.152623 | AGCTAAGCATTCACTACAACAGA | 57.847 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
3618 | 15189 | 5.738909 | AGCTAAGCATTCACTACAACAGAT | 58.261 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
3619 | 15190 | 5.583854 | AGCTAAGCATTCACTACAACAGATG | 59.416 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3620 | 15191 | 5.582269 | GCTAAGCATTCACTACAACAGATGA | 59.418 | 40.000 | 0.00 | 0.00 | 0.00 | 2.92 |
3621 | 15192 | 6.092670 | GCTAAGCATTCACTACAACAGATGAA | 59.907 | 38.462 | 0.00 | 0.00 | 35.64 | 2.57 |
3622 | 15193 | 6.882610 | AAGCATTCACTACAACAGATGAAA | 57.117 | 33.333 | 0.00 | 0.00 | 34.88 | 2.69 |
3623 | 15194 | 7.458409 | AAGCATTCACTACAACAGATGAAAT | 57.542 | 32.000 | 0.00 | 0.00 | 34.88 | 2.17 |
3624 | 15195 | 7.081526 | AGCATTCACTACAACAGATGAAATC | 57.918 | 36.000 | 0.00 | 0.00 | 46.04 | 2.17 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
7 | 8 | 2.361104 | CGGGGTTGTGGTGGATGG | 60.361 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
26 | 27 | 4.400961 | GAGCTTCCTGGCGGCTGT | 62.401 | 66.667 | 11.43 | 0.00 | 36.37 | 4.40 |
27 | 28 | 4.093291 | AGAGCTTCCTGGCGGCTG | 62.093 | 66.667 | 11.43 | 10.13 | 36.37 | 4.85 |
28 | 29 | 3.780173 | GAGAGCTTCCTGGCGGCT | 61.780 | 66.667 | 11.43 | 11.81 | 39.16 | 5.52 |
29 | 30 | 4.847444 | GGAGAGCTTCCTGGCGGC | 62.847 | 72.222 | 0.00 | 0.00 | 43.16 | 6.53 |
31 | 32 | 4.168291 | GGGGAGAGCTTCCTGGCG | 62.168 | 72.222 | 12.71 | 0.00 | 45.98 | 5.69 |
32 | 33 | 3.803162 | GGGGGAGAGCTTCCTGGC | 61.803 | 72.222 | 12.71 | 0.00 | 45.98 | 4.85 |
34 | 35 | 1.606531 | CAAGGGGGAGAGCTTCCTG | 59.393 | 63.158 | 12.71 | 2.65 | 45.98 | 3.86 |
35 | 36 | 1.617839 | CCAAGGGGGAGAGCTTCCT | 60.618 | 63.158 | 12.71 | 0.00 | 45.98 | 3.36 |
56 | 57 | 1.613630 | TTGTGGAGGGAGAGGCCTC | 60.614 | 63.158 | 26.22 | 26.22 | 38.70 | 4.70 |
162 | 171 | 1.419387 | GGAGAGGGAGATGAACATGGG | 59.581 | 57.143 | 0.00 | 0.00 | 0.00 | 4.00 |
169 | 178 | 1.862242 | TGGAGATGGAGAGGGAGATGA | 59.138 | 52.381 | 0.00 | 0.00 | 0.00 | 2.92 |
181 | 190 | 4.778213 | TTTTAGGTGAGGATGGAGATGG | 57.222 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
223 | 233 | 9.803315 | CAAAGAAGAATGATTCATTGATGTCAT | 57.197 | 29.630 | 16.41 | 8.47 | 39.20 | 3.06 |
243 | 253 | 8.344831 | CAAACATAGATGAACTGACACAAAGAA | 58.655 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
255 | 265 | 9.713740 | GAATCAATCACTCAAACATAGATGAAC | 57.286 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
280 | 290 | 6.307776 | AGATCATATCTCAACCTAGAACCGA | 58.692 | 40.000 | 0.00 | 0.00 | 33.42 | 4.69 |
321 | 414 | 8.709386 | AGTAAATACTAGAGCATGTCACAAAG | 57.291 | 34.615 | 0.00 | 0.00 | 34.13 | 2.77 |
328 | 421 | 4.036498 | ACGCGAGTAAATACTAGAGCATGT | 59.964 | 41.667 | 15.93 | 0.00 | 46.88 | 3.21 |
367 | 460 | 4.608948 | AGATCACAAGAAAGGACGTCTT | 57.391 | 40.909 | 16.46 | 4.52 | 35.69 | 3.01 |
390 | 483 | 6.538742 | ACACCTATGTTAGTGCATGTGATAAC | 59.461 | 38.462 | 0.00 | 2.21 | 34.46 | 1.89 |
418 | 511 | 7.309377 | GCACCACATTCATAGGCATACATATTT | 60.309 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
602 | 708 | 3.191371 | CCAACCCTTGTTTAGCTGCTTAG | 59.809 | 47.826 | 7.79 | 0.00 | 30.42 | 2.18 |
692 | 814 | 3.928375 | CAGGCTATGAAAATTGTTGCCAC | 59.072 | 43.478 | 0.00 | 0.00 | 41.12 | 5.01 |
849 | 3908 | 7.872993 | TGACTAGTGTTCACAGGAAATTTCTAG | 59.127 | 37.037 | 17.42 | 12.33 | 34.13 | 2.43 |
1224 | 4829 | 2.770475 | GGAGGAGGAAGGGAGGCC | 60.770 | 72.222 | 0.00 | 0.00 | 0.00 | 5.19 |
1309 | 5043 | 2.203480 | GGGTGGCACTGGAGCAAA | 60.203 | 61.111 | 18.45 | 0.00 | 35.83 | 3.68 |
1690 | 5424 | 2.097038 | GCTTGTGATGAGCGCGTCT | 61.097 | 57.895 | 8.43 | 5.17 | 0.00 | 4.18 |
1825 | 5559 | 2.249309 | CGCACCGTGCTGTTCTTG | 59.751 | 61.111 | 20.87 | 0.02 | 42.25 | 3.02 |
2117 | 5869 | 2.281345 | AGTGCAGTGTGCTCTGGC | 60.281 | 61.111 | 2.82 | 0.00 | 44.42 | 4.85 |
2120 | 5872 | 0.033228 | GAGACAGTGCAGTGTGCTCT | 59.967 | 55.000 | 31.24 | 21.24 | 46.71 | 4.09 |
2121 | 5873 | 0.948141 | GGAGACAGTGCAGTGTGCTC | 60.948 | 60.000 | 31.24 | 29.23 | 45.31 | 4.26 |
2122 | 5874 | 1.070445 | GGAGACAGTGCAGTGTGCT | 59.930 | 57.895 | 31.24 | 24.55 | 45.31 | 4.40 |
2123 | 5875 | 0.948141 | GAGGAGACAGTGCAGTGTGC | 60.948 | 60.000 | 31.24 | 21.01 | 45.29 | 4.57 |
2124 | 5876 | 0.320247 | GGAGGAGACAGTGCAGTGTG | 60.320 | 60.000 | 31.24 | 10.49 | 0.00 | 3.82 |
2134 | 5886 | 2.652348 | AGAAGAAGAGGAGGAGGAGACA | 59.348 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2135 | 5887 | 3.382083 | AGAAGAAGAGGAGGAGGAGAC | 57.618 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
2180 | 5944 | 8.183536 | CGTGATCAGATCAAAATATTTTCCACA | 58.816 | 33.333 | 15.02 | 0.00 | 41.69 | 4.17 |
2208 | 5972 | 1.548081 | CAGCCATTGTGTCCATTCCA | 58.452 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2209 | 5973 | 0.174162 | GCAGCCATTGTGTCCATTCC | 59.826 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2210 | 5974 | 0.889994 | TGCAGCCATTGTGTCCATTC | 59.110 | 50.000 | 0.00 | 0.00 | 0.00 | 2.67 |
2211 | 5975 | 0.892755 | CTGCAGCCATTGTGTCCATT | 59.107 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2212 | 5976 | 0.968901 | CCTGCAGCCATTGTGTCCAT | 60.969 | 55.000 | 8.66 | 0.00 | 0.00 | 3.41 |
2238 | 6002 | 1.742761 | AGCAAGGGTGATCGTTCATG | 58.257 | 50.000 | 0.00 | 0.00 | 33.56 | 3.07 |
2255 | 6019 | 4.072088 | CGAACACCGCGGTCAAGC | 62.072 | 66.667 | 31.80 | 16.95 | 0.00 | 4.01 |
2302 | 6066 | 2.932614 | CCTCAATCAGCACGTAGAAAGG | 59.067 | 50.000 | 0.00 | 0.00 | 0.00 | 3.11 |
2328 | 6092 | 2.586245 | CTCTCCATCCAGCGGCAA | 59.414 | 61.111 | 1.45 | 0.00 | 0.00 | 4.52 |
2401 | 6165 | 7.603404 | CACAGATCAGTGAAGAAGAAGAAGATT | 59.397 | 37.037 | 12.62 | 0.00 | 42.05 | 2.40 |
2445 | 6295 | 3.338249 | TCAGAGCACAAAACATAGGAGC | 58.662 | 45.455 | 0.00 | 0.00 | 0.00 | 4.70 |
2455 | 6305 | 6.936335 | TCTGTATTCAGATTTCAGAGCACAAA | 59.064 | 34.615 | 0.00 | 0.00 | 44.58 | 2.83 |
2516 | 6370 | 0.465097 | CATCAGTCCATCACCCTGCC | 60.465 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2590 | 6530 | 2.225293 | ACAGACTTGGCCTACTGGAGTA | 60.225 | 50.000 | 3.32 | 0.00 | 35.08 | 2.59 |
2591 | 6531 | 1.270907 | CAGACTTGGCCTACTGGAGT | 58.729 | 55.000 | 3.32 | 0.00 | 34.57 | 3.85 |
2592 | 6532 | 1.270907 | ACAGACTTGGCCTACTGGAG | 58.729 | 55.000 | 3.32 | 0.00 | 35.08 | 3.86 |
2593 | 6533 | 2.615986 | TACAGACTTGGCCTACTGGA | 57.384 | 50.000 | 3.32 | 1.93 | 35.08 | 3.86 |
2655 | 6595 | 1.066286 | GCAGCATCAAGACTGGAGAGT | 60.066 | 52.381 | 0.00 | 0.00 | 34.38 | 3.24 |
2656 | 6596 | 1.654317 | GCAGCATCAAGACTGGAGAG | 58.346 | 55.000 | 0.00 | 0.00 | 34.38 | 3.20 |
2657 | 6597 | 0.251354 | GGCAGCATCAAGACTGGAGA | 59.749 | 55.000 | 0.00 | 0.00 | 34.38 | 3.71 |
2658 | 6598 | 1.088340 | CGGCAGCATCAAGACTGGAG | 61.088 | 60.000 | 0.00 | 0.00 | 34.38 | 3.86 |
2659 | 6599 | 1.078918 | CGGCAGCATCAAGACTGGA | 60.079 | 57.895 | 0.00 | 0.00 | 34.38 | 3.86 |
2660 | 6600 | 2.110967 | CCGGCAGCATCAAGACTGG | 61.111 | 63.158 | 0.00 | 0.00 | 34.38 | 4.00 |
2661 | 6601 | 0.957395 | AACCGGCAGCATCAAGACTG | 60.957 | 55.000 | 0.00 | 0.00 | 36.96 | 3.51 |
2662 | 6602 | 0.250901 | AAACCGGCAGCATCAAGACT | 60.251 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
2663 | 6603 | 0.598065 | AAAACCGGCAGCATCAAGAC | 59.402 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2664 | 6604 | 0.881118 | GAAAACCGGCAGCATCAAGA | 59.119 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2665 | 6605 | 0.454957 | CGAAAACCGGCAGCATCAAG | 60.455 | 55.000 | 0.00 | 0.00 | 33.91 | 3.02 |
2666 | 6606 | 1.578926 | CGAAAACCGGCAGCATCAA | 59.421 | 52.632 | 0.00 | 0.00 | 33.91 | 2.57 |
2667 | 6607 | 3.262936 | CGAAAACCGGCAGCATCA | 58.737 | 55.556 | 0.00 | 0.00 | 33.91 | 3.07 |
2676 | 6616 | 1.467342 | GTTCCTGGATTCCGAAAACCG | 59.533 | 52.381 | 0.00 | 0.00 | 38.18 | 4.44 |
2677 | 6617 | 1.467342 | CGTTCCTGGATTCCGAAAACC | 59.533 | 52.381 | 0.00 | 2.04 | 0.00 | 3.27 |
2678 | 6618 | 2.415512 | CTCGTTCCTGGATTCCGAAAAC | 59.584 | 50.000 | 12.60 | 1.61 | 0.00 | 2.43 |
2679 | 6619 | 2.695359 | CTCGTTCCTGGATTCCGAAAA | 58.305 | 47.619 | 12.60 | 0.00 | 0.00 | 2.29 |
2680 | 6620 | 1.674817 | GCTCGTTCCTGGATTCCGAAA | 60.675 | 52.381 | 12.60 | 0.00 | 0.00 | 3.46 |
2681 | 6621 | 0.108329 | GCTCGTTCCTGGATTCCGAA | 60.108 | 55.000 | 12.60 | 0.00 | 0.00 | 4.30 |
2682 | 6622 | 1.254975 | TGCTCGTTCCTGGATTCCGA | 61.255 | 55.000 | 0.00 | 5.39 | 0.00 | 4.55 |
2683 | 6623 | 1.084370 | GTGCTCGTTCCTGGATTCCG | 61.084 | 60.000 | 0.00 | 0.71 | 0.00 | 4.30 |
2684 | 6624 | 0.744771 | GGTGCTCGTTCCTGGATTCC | 60.745 | 60.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2685 | 6625 | 0.744771 | GGGTGCTCGTTCCTGGATTC | 60.745 | 60.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2686 | 6626 | 1.299976 | GGGTGCTCGTTCCTGGATT | 59.700 | 57.895 | 0.00 | 0.00 | 0.00 | 3.01 |
2687 | 6627 | 2.990479 | GGGTGCTCGTTCCTGGAT | 59.010 | 61.111 | 0.00 | 0.00 | 0.00 | 3.41 |
2688 | 6628 | 3.691342 | CGGGTGCTCGTTCCTGGA | 61.691 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
2693 | 6633 | 4.719369 | AGTCGCGGGTGCTCGTTC | 62.719 | 66.667 | 6.13 | 0.00 | 39.65 | 3.95 |
2694 | 6634 | 4.295119 | AAGTCGCGGGTGCTCGTT | 62.295 | 61.111 | 6.13 | 0.00 | 39.65 | 3.85 |
2695 | 6635 | 4.719369 | GAAGTCGCGGGTGCTCGT | 62.719 | 66.667 | 6.13 | 0.00 | 39.65 | 4.18 |
2696 | 6636 | 4.717629 | TGAAGTCGCGGGTGCTCG | 62.718 | 66.667 | 6.13 | 0.00 | 39.65 | 5.03 |
2697 | 6637 | 1.959226 | TTTGAAGTCGCGGGTGCTC | 60.959 | 57.895 | 6.13 | 0.00 | 39.65 | 4.26 |
2702 | 6704 | 3.723835 | CGAATTAAGTTTGAAGTCGCGGG | 60.724 | 47.826 | 6.13 | 0.00 | 37.54 | 6.13 |
2704 | 6706 | 3.833061 | CACGAATTAAGTTTGAAGTCGCG | 59.167 | 43.478 | 0.00 | 0.00 | 45.46 | 5.87 |
2753 | 6761 | 9.495572 | AAAGGTTCAATACTTAAGTCTCTCTTG | 57.504 | 33.333 | 12.39 | 9.35 | 37.56 | 3.02 |
2856 | 6878 | 7.182361 | CATAACAGTATGGCAACTCACATAG | 57.818 | 40.000 | 0.00 | 0.00 | 43.62 | 2.23 |
3002 | 11148 | 5.515797 | AAACAGTCCAAAGGAGTTTTAGC | 57.484 | 39.130 | 0.00 | 0.00 | 32.26 | 3.09 |
3109 | 14648 | 4.453751 | GCGTAAAACCCACCAGGATATTA | 58.546 | 43.478 | 0.00 | 0.00 | 39.89 | 0.98 |
3110 | 14649 | 3.284617 | GCGTAAAACCCACCAGGATATT | 58.715 | 45.455 | 0.00 | 0.00 | 39.89 | 1.28 |
3111 | 14650 | 2.422377 | GGCGTAAAACCCACCAGGATAT | 60.422 | 50.000 | 0.00 | 0.00 | 39.89 | 1.63 |
3160 | 14700 | 5.804639 | TGGCTACACATCTCTAAACACATT | 58.195 | 37.500 | 0.00 | 0.00 | 0.00 | 2.71 |
3246 | 14786 | 8.523464 | CAAACGAGTTAACAATCTGAACAAAAG | 58.477 | 33.333 | 8.61 | 0.00 | 0.00 | 2.27 |
3271 | 14818 | 9.004717 | TGACACGAATTATAAATTTCCAAGACA | 57.995 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
3348 | 14899 | 6.459923 | GGTTTTGGCTGTATTTTGTCCATAA | 58.540 | 36.000 | 0.00 | 0.00 | 0.00 | 1.90 |
3352 | 14903 | 3.323691 | AGGGTTTTGGCTGTATTTTGTCC | 59.676 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
3462 | 15030 | 2.248248 | GCTAGAAAAGGCTGGGGTTTT | 58.752 | 47.619 | 0.00 | 0.00 | 0.00 | 2.43 |
3464 | 15032 | 3.672066 | GCTAGAAAAGGCTGGGGTT | 57.328 | 52.632 | 0.00 | 0.00 | 0.00 | 4.11 |
3479 | 15047 | 1.076923 | GAGGAGAGTGGACGGGCTA | 60.077 | 63.158 | 0.00 | 0.00 | 0.00 | 3.93 |
3499 | 15067 | 0.112995 | TGCAGGATTGGGCCCATATC | 59.887 | 55.000 | 29.23 | 27.44 | 0.00 | 1.63 |
3500 | 15068 | 0.113776 | CTGCAGGATTGGGCCCATAT | 59.886 | 55.000 | 29.23 | 21.54 | 0.00 | 1.78 |
3542 | 15113 | 1.762957 | ACCGTATCAGGCTGCATAGTT | 59.237 | 47.619 | 10.34 | 0.00 | 33.69 | 2.24 |
3550 | 15121 | 2.736347 | AGAACAGTACCGTATCAGGCT | 58.264 | 47.619 | 0.00 | 0.00 | 33.69 | 4.58 |
3555 | 15126 | 8.699283 | AATGAACTTTAGAACAGTACCGTATC | 57.301 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
3556 | 15127 | 7.487189 | CGAATGAACTTTAGAACAGTACCGTAT | 59.513 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
3557 | 15128 | 6.803320 | CGAATGAACTTTAGAACAGTACCGTA | 59.197 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
3558 | 15129 | 5.632347 | CGAATGAACTTTAGAACAGTACCGT | 59.368 | 40.000 | 0.00 | 0.00 | 0.00 | 4.83 |
3559 | 15130 | 5.860182 | TCGAATGAACTTTAGAACAGTACCG | 59.140 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3560 | 15131 | 7.647907 | TTCGAATGAACTTTAGAACAGTACC | 57.352 | 36.000 | 0.00 | 0.00 | 0.00 | 3.34 |
3561 | 15132 | 8.169268 | CCATTCGAATGAACTTTAGAACAGTAC | 58.831 | 37.037 | 34.21 | 0.00 | 38.70 | 2.73 |
3562 | 15133 | 8.092068 | TCCATTCGAATGAACTTTAGAACAGTA | 58.908 | 33.333 | 34.21 | 5.37 | 38.70 | 2.74 |
3563 | 15134 | 6.934645 | TCCATTCGAATGAACTTTAGAACAGT | 59.065 | 34.615 | 34.21 | 0.00 | 38.70 | 3.55 |
3564 | 15135 | 7.118390 | AGTCCATTCGAATGAACTTTAGAACAG | 59.882 | 37.037 | 34.21 | 15.62 | 28.88 | 3.16 |
3565 | 15136 | 6.934645 | AGTCCATTCGAATGAACTTTAGAACA | 59.065 | 34.615 | 34.21 | 2.58 | 28.88 | 3.18 |
3566 | 15137 | 7.117812 | TCAGTCCATTCGAATGAACTTTAGAAC | 59.882 | 37.037 | 34.21 | 17.90 | 42.38 | 3.01 |
3567 | 15138 | 7.117812 | GTCAGTCCATTCGAATGAACTTTAGAA | 59.882 | 37.037 | 34.21 | 12.84 | 46.48 | 2.10 |
3568 | 15139 | 6.590292 | GTCAGTCCATTCGAATGAACTTTAGA | 59.410 | 38.462 | 34.21 | 21.87 | 46.48 | 2.10 |
3569 | 15140 | 6.591834 | AGTCAGTCCATTCGAATGAACTTTAG | 59.408 | 38.462 | 34.21 | 20.14 | 46.48 | 1.85 |
3570 | 15141 | 6.464222 | AGTCAGTCCATTCGAATGAACTTTA | 58.536 | 36.000 | 34.21 | 19.51 | 46.48 | 1.85 |
3571 | 15142 | 5.308825 | AGTCAGTCCATTCGAATGAACTTT | 58.691 | 37.500 | 34.21 | 17.27 | 46.48 | 2.66 |
3572 | 15143 | 4.899502 | AGTCAGTCCATTCGAATGAACTT | 58.100 | 39.130 | 34.21 | 15.82 | 46.48 | 2.66 |
3573 | 15144 | 4.543590 | AGTCAGTCCATTCGAATGAACT | 57.456 | 40.909 | 34.21 | 28.72 | 46.48 | 3.01 |
3574 | 15145 | 4.268884 | GCTAGTCAGTCCATTCGAATGAAC | 59.731 | 45.833 | 34.21 | 26.98 | 46.48 | 3.18 |
3575 | 15146 | 4.160439 | AGCTAGTCAGTCCATTCGAATGAA | 59.840 | 41.667 | 34.21 | 16.78 | 46.48 | 2.57 |
3576 | 15147 | 3.701542 | AGCTAGTCAGTCCATTCGAATGA | 59.298 | 43.478 | 34.21 | 19.66 | 43.07 | 2.57 |
3577 | 15148 | 4.052159 | AGCTAGTCAGTCCATTCGAATG | 57.948 | 45.455 | 27.66 | 27.66 | 37.93 | 2.67 |
3578 | 15149 | 5.737635 | GCTTAGCTAGTCAGTCCATTCGAAT | 60.738 | 44.000 | 4.39 | 4.39 | 0.00 | 3.34 |
3579 | 15150 | 4.440250 | GCTTAGCTAGTCAGTCCATTCGAA | 60.440 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
3580 | 15151 | 3.066900 | GCTTAGCTAGTCAGTCCATTCGA | 59.933 | 47.826 | 0.00 | 0.00 | 0.00 | 3.71 |
3581 | 15152 | 3.181486 | TGCTTAGCTAGTCAGTCCATTCG | 60.181 | 47.826 | 5.60 | 0.00 | 0.00 | 3.34 |
3582 | 15153 | 4.392921 | TGCTTAGCTAGTCAGTCCATTC | 57.607 | 45.455 | 5.60 | 0.00 | 0.00 | 2.67 |
3583 | 15154 | 5.104776 | TGAATGCTTAGCTAGTCAGTCCATT | 60.105 | 40.000 | 16.66 | 8.47 | 29.75 | 3.16 |
3584 | 15155 | 4.406972 | TGAATGCTTAGCTAGTCAGTCCAT | 59.593 | 41.667 | 16.66 | 2.03 | 29.75 | 3.41 |
3585 | 15156 | 3.769300 | TGAATGCTTAGCTAGTCAGTCCA | 59.231 | 43.478 | 16.66 | 7.20 | 29.75 | 4.02 |
3586 | 15157 | 4.116238 | GTGAATGCTTAGCTAGTCAGTCC | 58.884 | 47.826 | 16.66 | 8.65 | 29.75 | 3.85 |
3587 | 15158 | 5.004922 | AGTGAATGCTTAGCTAGTCAGTC | 57.995 | 43.478 | 5.60 | 14.09 | 0.00 | 3.51 |
3588 | 15159 | 5.419155 | TGTAGTGAATGCTTAGCTAGTCAGT | 59.581 | 40.000 | 5.60 | 11.61 | 0.00 | 3.41 |
3589 | 15160 | 5.895928 | TGTAGTGAATGCTTAGCTAGTCAG | 58.104 | 41.667 | 5.60 | 0.00 | 0.00 | 3.51 |
3590 | 15161 | 5.914898 | TGTAGTGAATGCTTAGCTAGTCA | 57.085 | 39.130 | 5.60 | 4.36 | 0.00 | 3.41 |
3591 | 15162 | 6.100004 | TGTTGTAGTGAATGCTTAGCTAGTC | 58.900 | 40.000 | 5.60 | 1.67 | 0.00 | 2.59 |
3592 | 15163 | 6.037786 | TGTTGTAGTGAATGCTTAGCTAGT | 57.962 | 37.500 | 5.60 | 0.00 | 0.00 | 2.57 |
3593 | 15164 | 6.333416 | TCTGTTGTAGTGAATGCTTAGCTAG | 58.667 | 40.000 | 5.60 | 0.00 | 0.00 | 3.42 |
3594 | 15165 | 6.280855 | TCTGTTGTAGTGAATGCTTAGCTA | 57.719 | 37.500 | 5.60 | 0.00 | 0.00 | 3.32 |
3595 | 15166 | 5.152623 | TCTGTTGTAGTGAATGCTTAGCT | 57.847 | 39.130 | 5.60 | 0.00 | 0.00 | 3.32 |
3596 | 15167 | 5.582269 | TCATCTGTTGTAGTGAATGCTTAGC | 59.418 | 40.000 | 0.00 | 0.00 | 0.00 | 3.09 |
3597 | 15168 | 7.601073 | TTCATCTGTTGTAGTGAATGCTTAG | 57.399 | 36.000 | 0.00 | 0.00 | 0.00 | 2.18 |
3598 | 15169 | 7.977789 | TTTCATCTGTTGTAGTGAATGCTTA | 57.022 | 32.000 | 0.00 | 0.00 | 31.34 | 3.09 |
3599 | 15170 | 6.882610 | TTTCATCTGTTGTAGTGAATGCTT | 57.117 | 33.333 | 0.00 | 0.00 | 31.34 | 3.91 |
3600 | 15171 | 6.656270 | TGATTTCATCTGTTGTAGTGAATGCT | 59.344 | 34.615 | 0.00 | 0.00 | 31.34 | 3.79 |
3601 | 15172 | 6.845302 | TGATTTCATCTGTTGTAGTGAATGC | 58.155 | 36.000 | 0.00 | 0.00 | 31.34 | 3.56 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.