Multiple sequence alignment - TraesCS2B01G167300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G167300 chr2B 100.000 3227 0 0 1 3227 140522039 140518813 0.000000e+00 5960
1 TraesCS2B01G167300 chr2B 85.302 1143 73 29 1541 2615 140238199 140237084 0.000000e+00 1092
2 TraesCS2B01G167300 chr2B 91.415 431 24 9 2785 3208 140504719 140504295 2.160000e-161 579
3 TraesCS2B01G167300 chr2A 84.107 1378 132 49 1056 2379 87563799 87562455 0.000000e+00 1251
4 TraesCS2B01G167300 chr2D 86.307 964 87 27 1043 2005 87581192 87580273 0.000000e+00 1007
5 TraesCS2B01G167300 chr2D 90.189 530 33 14 2623 3148 87569743 87569229 0.000000e+00 673
6 TraesCS2B01G167300 chr2D 79.717 636 63 35 2008 2621 87580228 87579637 1.800000e-107 399
7 TraesCS2B01G167300 chrUn 94.376 569 16 5 26 582 17048721 17048157 0.000000e+00 859
8 TraesCS2B01G167300 chrUn 88.352 455 29 8 2692 3143 325783134 325783567 2.850000e-145 525
9 TraesCS2B01G167300 chrUn 88.827 179 11 4 2381 2555 468555882 468555709 9.070000e-51 211
10 TraesCS2B01G167300 chr3A 95.627 343 10 2 577 919 380917372 380917709 2.190000e-151 545
11 TraesCS2B01G167300 chr3A 83.684 190 31 0 1702 1891 99387916 99387727 2.560000e-41 180
12 TraesCS2B01G167300 chr3A 83.333 186 31 0 1702 1887 99296945 99296760 4.280000e-39 172
13 TraesCS2B01G167300 chr1D 88.889 351 30 6 235 582 13033763 13034107 1.070000e-114 424
14 TraesCS2B01G167300 chr1B 89.080 348 29 6 238 582 18396773 18396432 1.070000e-114 424
15 TraesCS2B01G167300 chr1A 88.218 348 32 6 238 582 14509708 14510049 1.080000e-109 407
16 TraesCS2B01G167300 chr4A 90.110 273 20 6 313 583 141840574 141840307 6.630000e-92 348
17 TraesCS2B01G167300 chr4A 91.613 155 13 0 429 583 141838916 141838762 7.010000e-52 215
18 TraesCS2B01G167300 chr4A 98.276 58 1 0 318 375 141839445 141839388 5.700000e-18 102
19 TraesCS2B01G167300 chr3B 88.390 267 23 7 318 582 782432216 782431956 6.720000e-82 315
20 TraesCS2B01G167300 chr3D 83.069 189 32 0 1702 1890 83502023 83501835 4.280000e-39 172
21 TraesCS2B01G167300 chr4B 81.395 172 25 6 777 946 6384823 6384989 2.020000e-27 134


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G167300 chr2B 140518813 140522039 3226 True 5960.000000 5960 100.000 1 3227 1 chr2B.!!$R3 3226
1 TraesCS2B01G167300 chr2B 140237084 140238199 1115 True 1092.000000 1092 85.302 1541 2615 1 chr2B.!!$R1 1074
2 TraesCS2B01G167300 chr2A 87562455 87563799 1344 True 1251.000000 1251 84.107 1056 2379 1 chr2A.!!$R1 1323
3 TraesCS2B01G167300 chr2D 87579637 87581192 1555 True 703.000000 1007 83.012 1043 2621 2 chr2D.!!$R2 1578
4 TraesCS2B01G167300 chr2D 87569229 87569743 514 True 673.000000 673 90.189 2623 3148 1 chr2D.!!$R1 525
5 TraesCS2B01G167300 chrUn 17048157 17048721 564 True 859.000000 859 94.376 26 582 1 chrUn.!!$R1 556
6 TraesCS2B01G167300 chr4A 141838762 141840574 1812 True 221.666667 348 93.333 313 583 3 chr4A.!!$R1 270

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
997 2556 0.031178 CCAAGTCACAAGTGCCAAGC 59.969 55.0 0.0 0.0 0.0 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2701 4418 0.533755 CGGAGAGTGGGGATTCATGC 60.534 60.0 0.0 0.0 0.0 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.768317 ACCAAATAACTGTACACATGTTGC 58.232 37.500 8.75 0.00 0.00 4.17
24 25 5.300539 ACCAAATAACTGTACACATGTTGCA 59.699 36.000 8.75 0.00 0.00 4.08
32 33 3.501828 TGTACACATGTTGCATCAGGAAC 59.498 43.478 15.78 10.62 45.24 3.62
148 149 3.370978 TGCGTTGCTTATGCTAAACTCTC 59.629 43.478 1.96 0.00 39.61 3.20
175 176 4.689812 GTCAGCTGGCAACTCTCATATATG 59.310 45.833 14.88 6.36 37.61 1.78
298 310 5.722263 CCATAGCATCTGATTAGAGACCAG 58.278 45.833 0.00 0.00 36.14 4.00
316 328 5.945784 AGACCAGCTGCAGATTAATAAACAA 59.054 36.000 20.43 0.00 0.00 2.83
424 438 4.757019 TTGTGTACCTCACTTACCAACA 57.243 40.909 0.00 0.00 46.27 3.33
425 439 4.967084 TGTGTACCTCACTTACCAACAT 57.033 40.909 0.00 0.00 46.27 2.71
426 440 6.422344 TTGTGTACCTCACTTACCAACATA 57.578 37.500 0.00 0.00 46.27 2.29
427 441 6.614694 TGTGTACCTCACTTACCAACATAT 57.385 37.500 0.00 0.00 46.27 1.78
583 2142 4.116961 AGCGCGCATTTATGTTCTAGTAA 58.883 39.130 35.10 0.00 0.00 2.24
584 2143 4.569162 AGCGCGCATTTATGTTCTAGTAAA 59.431 37.500 35.10 0.00 0.00 2.01
585 2144 4.664851 GCGCGCATTTATGTTCTAGTAAAC 59.335 41.667 29.10 0.00 0.00 2.01
586 2145 5.725590 GCGCGCATTTATGTTCTAGTAAACA 60.726 40.000 29.10 0.00 42.92 2.83
587 2146 6.244999 CGCGCATTTATGTTCTAGTAAACAA 58.755 36.000 8.75 0.00 42.10 2.83
588 2147 6.739100 CGCGCATTTATGTTCTAGTAAACAAA 59.261 34.615 8.75 0.00 42.10 2.83
589 2148 7.428183 CGCGCATTTATGTTCTAGTAAACAAAT 59.572 33.333 8.75 0.00 42.10 2.32
590 2149 9.710979 GCGCATTTATGTTCTAGTAAACAAATA 57.289 29.630 0.30 0.00 42.10 1.40
598 2157 8.876275 TGTTCTAGTAAACAAATACAAGACGT 57.124 30.769 0.00 0.00 36.25 4.34
599 2158 9.316730 TGTTCTAGTAAACAAATACAAGACGTT 57.683 29.630 0.00 0.00 36.25 3.99
605 2164 9.316730 AGTAAACAAATACAAGACGTTTAGTGA 57.683 29.630 0.00 0.00 35.46 3.41
606 2165 9.361712 GTAAACAAATACAAGACGTTTAGTGAC 57.638 33.333 0.00 0.00 33.89 3.67
607 2166 6.535274 ACAAATACAAGACGTTTAGTGACC 57.465 37.500 0.00 0.00 0.00 4.02
608 2167 6.285990 ACAAATACAAGACGTTTAGTGACCT 58.714 36.000 0.00 0.00 0.00 3.85
609 2168 7.436118 ACAAATACAAGACGTTTAGTGACCTA 58.564 34.615 0.00 0.00 0.00 3.08
610 2169 7.927629 ACAAATACAAGACGTTTAGTGACCTAA 59.072 33.333 0.00 0.00 0.00 2.69
611 2170 8.767085 CAAATACAAGACGTTTAGTGACCTAAA 58.233 33.333 0.00 0.00 40.10 1.85
612 2171 8.891671 AATACAAGACGTTTAGTGACCTAAAA 57.108 30.769 0.00 0.00 43.06 1.52
613 2172 9.498176 AATACAAGACGTTTAGTGACCTAAAAT 57.502 29.630 0.00 0.00 43.06 1.82
614 2173 7.186021 ACAAGACGTTTAGTGACCTAAAATG 57.814 36.000 0.00 0.00 43.06 2.32
615 2174 6.764560 ACAAGACGTTTAGTGACCTAAAATGT 59.235 34.615 0.00 1.63 43.06 2.71
616 2175 7.281549 ACAAGACGTTTAGTGACCTAAAATGTT 59.718 33.333 0.00 0.00 43.06 2.71
617 2176 7.797038 AGACGTTTAGTGACCTAAAATGTTT 57.203 32.000 0.00 0.00 43.06 2.83
618 2177 8.217131 AGACGTTTAGTGACCTAAAATGTTTT 57.783 30.769 0.00 0.00 43.06 2.43
619 2178 9.328845 AGACGTTTAGTGACCTAAAATGTTTTA 57.671 29.630 0.00 0.00 43.06 1.52
620 2179 9.373750 GACGTTTAGTGACCTAAAATGTTTTAC 57.626 33.333 0.00 0.00 43.06 2.01
621 2180 8.891720 ACGTTTAGTGACCTAAAATGTTTTACA 58.108 29.630 0.00 0.00 43.06 2.41
622 2181 9.887406 CGTTTAGTGACCTAAAATGTTTTACAT 57.113 29.630 0.00 0.00 43.06 2.29
660 2219 9.384764 GATAGTATACATTGCTTATTCCTTCCC 57.615 37.037 5.50 0.00 0.00 3.97
661 2220 7.394144 AGTATACATTGCTTATTCCTTCCCT 57.606 36.000 5.50 0.00 0.00 4.20
662 2221 7.816411 AGTATACATTGCTTATTCCTTCCCTT 58.184 34.615 5.50 0.00 0.00 3.95
663 2222 8.282256 AGTATACATTGCTTATTCCTTCCCTTT 58.718 33.333 5.50 0.00 0.00 3.11
664 2223 9.569122 GTATACATTGCTTATTCCTTCCCTTTA 57.431 33.333 0.00 0.00 0.00 1.85
666 2225 7.790782 ACATTGCTTATTCCTTCCCTTTAAA 57.209 32.000 0.00 0.00 0.00 1.52
667 2226 8.379428 ACATTGCTTATTCCTTCCCTTTAAAT 57.621 30.769 0.00 0.00 0.00 1.40
668 2227 8.825774 ACATTGCTTATTCCTTCCCTTTAAATT 58.174 29.630 0.00 0.00 0.00 1.82
669 2228 9.671279 CATTGCTTATTCCTTCCCTTTAAATTT 57.329 29.630 0.00 0.00 0.00 1.82
670 2229 9.671279 ATTGCTTATTCCTTCCCTTTAAATTTG 57.329 29.630 0.00 0.00 0.00 2.32
671 2230 7.619965 TGCTTATTCCTTCCCTTTAAATTTGG 58.380 34.615 0.00 0.00 0.00 3.28
672 2231 7.456269 TGCTTATTCCTTCCCTTTAAATTTGGA 59.544 33.333 0.00 0.00 0.00 3.53
673 2232 8.486210 GCTTATTCCTTCCCTTTAAATTTGGAT 58.514 33.333 0.00 0.00 0.00 3.41
677 2236 8.966155 TTCCTTCCCTTTAAATTTGGATTACT 57.034 30.769 0.00 0.00 0.00 2.24
678 2237 8.966155 TCCTTCCCTTTAAATTTGGATTACTT 57.034 30.769 0.00 0.00 0.00 2.24
691 2250 9.990868 AATTTGGATTACTTATTACCCTCAACT 57.009 29.630 0.00 0.00 0.00 3.16
706 2265 9.762381 TTACCCTCAACTAATGAATTAATTGGT 57.238 29.630 5.17 0.00 37.67 3.67
707 2266 8.664669 ACCCTCAACTAATGAATTAATTGGTT 57.335 30.769 10.68 10.68 40.59 3.67
708 2267 8.749354 ACCCTCAACTAATGAATTAATTGGTTC 58.251 33.333 13.02 0.00 38.67 3.62
709 2268 8.748412 CCCTCAACTAATGAATTAATTGGTTCA 58.252 33.333 13.02 1.78 38.67 3.18
710 2269 9.573133 CCTCAACTAATGAATTAATTGGTTCAC 57.427 33.333 13.02 0.00 38.67 3.18
720 2279 9.585099 TGAATTAATTGGTTCACTGAATTATGC 57.415 29.630 5.17 0.00 29.93 3.14
721 2280 9.807649 GAATTAATTGGTTCACTGAATTATGCT 57.192 29.630 5.17 0.00 0.00 3.79
722 2281 9.807649 AATTAATTGGTTCACTGAATTATGCTC 57.192 29.630 0.00 0.00 0.00 4.26
723 2282 8.579850 TTAATTGGTTCACTGAATTATGCTCT 57.420 30.769 0.00 0.00 0.00 4.09
724 2283 9.679661 TTAATTGGTTCACTGAATTATGCTCTA 57.320 29.630 0.00 0.00 0.00 2.43
725 2284 7.798596 ATTGGTTCACTGAATTATGCTCTAG 57.201 36.000 0.00 0.00 0.00 2.43
726 2285 6.544928 TGGTTCACTGAATTATGCTCTAGA 57.455 37.500 0.00 0.00 0.00 2.43
727 2286 7.129457 TGGTTCACTGAATTATGCTCTAGAT 57.871 36.000 0.00 0.00 0.00 1.98
728 2287 7.568349 TGGTTCACTGAATTATGCTCTAGATT 58.432 34.615 0.00 0.00 0.00 2.40
729 2288 8.704668 TGGTTCACTGAATTATGCTCTAGATTA 58.295 33.333 0.00 0.00 0.00 1.75
730 2289 9.717942 GGTTCACTGAATTATGCTCTAGATTAT 57.282 33.333 0.00 0.00 0.00 1.28
757 2316 8.611654 TGTACTACTACATATAACGCATCTGA 57.388 34.615 0.00 0.00 0.00 3.27
758 2317 8.718734 TGTACTACTACATATAACGCATCTGAG 58.281 37.037 0.00 0.00 0.00 3.35
759 2318 7.147143 ACTACTACATATAACGCATCTGAGG 57.853 40.000 0.00 0.00 0.00 3.86
760 2319 6.715718 ACTACTACATATAACGCATCTGAGGT 59.284 38.462 0.00 0.00 0.00 3.85
761 2320 6.015027 ACTACATATAACGCATCTGAGGTC 57.985 41.667 0.00 0.00 0.00 3.85
762 2321 4.258702 ACATATAACGCATCTGAGGTCC 57.741 45.455 0.00 0.00 0.00 4.46
763 2322 3.898123 ACATATAACGCATCTGAGGTCCT 59.102 43.478 0.00 0.00 0.00 3.85
764 2323 5.077564 ACATATAACGCATCTGAGGTCCTA 58.922 41.667 0.00 0.00 0.00 2.94
765 2324 5.717178 ACATATAACGCATCTGAGGTCCTAT 59.283 40.000 0.00 0.00 0.00 2.57
766 2325 6.890268 ACATATAACGCATCTGAGGTCCTATA 59.110 38.462 0.00 0.00 0.00 1.31
767 2326 7.396339 ACATATAACGCATCTGAGGTCCTATAA 59.604 37.037 0.00 0.00 0.00 0.98
768 2327 6.859112 ATAACGCATCTGAGGTCCTATAAT 57.141 37.500 0.00 0.00 0.00 1.28
769 2328 4.527509 ACGCATCTGAGGTCCTATAATG 57.472 45.455 0.00 0.00 0.00 1.90
770 2329 3.898123 ACGCATCTGAGGTCCTATAATGT 59.102 43.478 0.00 0.00 0.00 2.71
771 2330 5.077564 ACGCATCTGAGGTCCTATAATGTA 58.922 41.667 0.00 0.00 0.00 2.29
772 2331 5.047943 ACGCATCTGAGGTCCTATAATGTAC 60.048 44.000 0.00 0.00 0.00 2.90
773 2332 5.184096 CGCATCTGAGGTCCTATAATGTACT 59.816 44.000 0.00 0.00 0.00 2.73
774 2333 6.623986 CGCATCTGAGGTCCTATAATGTACTC 60.624 46.154 0.00 0.00 0.00 2.59
775 2334 6.435904 GCATCTGAGGTCCTATAATGTACTCT 59.564 42.308 0.00 0.00 0.00 3.24
776 2335 7.576666 GCATCTGAGGTCCTATAATGTACTCTG 60.577 44.444 0.00 0.00 0.00 3.35
777 2336 6.307776 TCTGAGGTCCTATAATGTACTCTGG 58.692 44.000 0.00 0.00 0.00 3.86
778 2337 4.833380 TGAGGTCCTATAATGTACTCTGGC 59.167 45.833 0.00 0.00 0.00 4.85
779 2338 5.081032 GAGGTCCTATAATGTACTCTGGCT 58.919 45.833 0.00 0.00 0.00 4.75
780 2339 4.835615 AGGTCCTATAATGTACTCTGGCTG 59.164 45.833 0.00 0.00 0.00 4.85
781 2340 4.589374 GGTCCTATAATGTACTCTGGCTGT 59.411 45.833 0.00 0.00 0.00 4.40
782 2341 5.070580 GGTCCTATAATGTACTCTGGCTGTT 59.929 44.000 0.00 0.00 0.00 3.16
783 2342 6.408206 GGTCCTATAATGTACTCTGGCTGTTT 60.408 42.308 0.00 0.00 0.00 2.83
784 2343 6.702282 GTCCTATAATGTACTCTGGCTGTTTC 59.298 42.308 0.00 0.00 0.00 2.78
785 2344 6.611642 TCCTATAATGTACTCTGGCTGTTTCT 59.388 38.462 0.00 0.00 0.00 2.52
786 2345 7.125811 TCCTATAATGTACTCTGGCTGTTTCTT 59.874 37.037 0.00 0.00 0.00 2.52
787 2346 7.770897 CCTATAATGTACTCTGGCTGTTTCTTT 59.229 37.037 0.00 0.00 0.00 2.52
788 2347 5.948992 AATGTACTCTGGCTGTTTCTTTC 57.051 39.130 0.00 0.00 0.00 2.62
789 2348 4.415881 TGTACTCTGGCTGTTTCTTTCA 57.584 40.909 0.00 0.00 0.00 2.69
790 2349 4.973168 TGTACTCTGGCTGTTTCTTTCAT 58.027 39.130 0.00 0.00 0.00 2.57
791 2350 5.376625 TGTACTCTGGCTGTTTCTTTCATT 58.623 37.500 0.00 0.00 0.00 2.57
792 2351 6.530120 TGTACTCTGGCTGTTTCTTTCATTA 58.470 36.000 0.00 0.00 0.00 1.90
793 2352 7.168219 TGTACTCTGGCTGTTTCTTTCATTAT 58.832 34.615 0.00 0.00 0.00 1.28
794 2353 6.749923 ACTCTGGCTGTTTCTTTCATTATC 57.250 37.500 0.00 0.00 0.00 1.75
795 2354 6.240894 ACTCTGGCTGTTTCTTTCATTATCA 58.759 36.000 0.00 0.00 0.00 2.15
796 2355 6.716628 ACTCTGGCTGTTTCTTTCATTATCAA 59.283 34.615 0.00 0.00 0.00 2.57
797 2356 7.395489 ACTCTGGCTGTTTCTTTCATTATCAAT 59.605 33.333 0.00 0.00 0.00 2.57
798 2357 8.125978 TCTGGCTGTTTCTTTCATTATCAATT 57.874 30.769 0.00 0.00 0.00 2.32
799 2358 8.030692 TCTGGCTGTTTCTTTCATTATCAATTG 58.969 33.333 0.00 0.00 0.00 2.32
800 2359 7.669427 TGGCTGTTTCTTTCATTATCAATTGT 58.331 30.769 5.13 0.00 0.00 2.71
801 2360 8.801299 TGGCTGTTTCTTTCATTATCAATTGTA 58.199 29.630 5.13 0.00 0.00 2.41
802 2361 9.638239 GGCTGTTTCTTTCATTATCAATTGTAA 57.362 29.630 5.13 4.37 0.00 2.41
819 2378 9.638239 TCAATTGTAAATTCTATTGCAAGTTCC 57.362 29.630 4.94 0.00 38.10 3.62
820 2379 9.643693 CAATTGTAAATTCTATTGCAAGTTCCT 57.356 29.630 4.94 0.00 38.10 3.36
824 2383 8.736244 TGTAAATTCTATTGCAAGTTCCTTACC 58.264 33.333 4.94 0.00 0.00 2.85
825 2384 8.957466 GTAAATTCTATTGCAAGTTCCTTACCT 58.043 33.333 4.94 0.00 0.00 3.08
827 2386 9.700831 AAATTCTATTGCAAGTTCCTTACCTAT 57.299 29.630 4.94 0.00 0.00 2.57
829 2388 9.780186 ATTCTATTGCAAGTTCCTTACCTATAC 57.220 33.333 4.94 0.00 0.00 1.47
830 2389 7.431249 TCTATTGCAAGTTCCTTACCTATACG 58.569 38.462 4.94 0.00 0.00 3.06
831 2390 5.664294 TTGCAAGTTCCTTACCTATACGA 57.336 39.130 0.00 0.00 0.00 3.43
832 2391 5.664294 TGCAAGTTCCTTACCTATACGAA 57.336 39.130 0.00 0.00 0.00 3.85
833 2392 5.413499 TGCAAGTTCCTTACCTATACGAAC 58.587 41.667 0.00 0.00 34.40 3.95
834 2393 5.047164 TGCAAGTTCCTTACCTATACGAACA 60.047 40.000 0.00 0.00 36.20 3.18
835 2394 6.047231 GCAAGTTCCTTACCTATACGAACAT 58.953 40.000 0.00 0.00 36.20 2.71
836 2395 6.018994 GCAAGTTCCTTACCTATACGAACATG 60.019 42.308 0.00 0.00 36.03 3.21
837 2396 6.786967 AGTTCCTTACCTATACGAACATGT 57.213 37.500 0.00 0.00 36.20 3.21
838 2397 7.179076 AGTTCCTTACCTATACGAACATGTT 57.821 36.000 11.78 11.78 36.20 2.71
839 2398 7.263496 AGTTCCTTACCTATACGAACATGTTC 58.737 38.462 25.68 25.68 36.20 3.18
852 2411 4.722194 GAACATGTTCGCAAGCAATTAGA 58.278 39.130 22.09 0.00 37.18 2.10
853 2412 4.764679 ACATGTTCGCAAGCAATTAGAA 57.235 36.364 0.00 0.00 37.18 2.10
854 2413 5.119931 ACATGTTCGCAAGCAATTAGAAA 57.880 34.783 0.00 0.00 37.18 2.52
855 2414 5.527951 ACATGTTCGCAAGCAATTAGAAAA 58.472 33.333 0.00 0.00 37.18 2.29
856 2415 5.982516 ACATGTTCGCAAGCAATTAGAAAAA 59.017 32.000 0.00 0.00 37.18 1.94
875 2434 1.627864 AAAAATGGGTGGAAGGGTCG 58.372 50.000 0.00 0.00 0.00 4.79
876 2435 0.898326 AAAATGGGTGGAAGGGTCGC 60.898 55.000 0.00 0.00 0.00 5.19
877 2436 2.075355 AAATGGGTGGAAGGGTCGCA 62.075 55.000 0.00 0.00 0.00 5.10
878 2437 1.863155 AATGGGTGGAAGGGTCGCAT 61.863 55.000 0.00 0.00 36.56 4.73
879 2438 2.438434 GGGTGGAAGGGTCGCATG 60.438 66.667 0.00 0.00 0.00 4.06
880 2439 2.351276 GGTGGAAGGGTCGCATGT 59.649 61.111 0.00 0.00 0.00 3.21
881 2440 1.745489 GGTGGAAGGGTCGCATGTC 60.745 63.158 0.00 0.00 0.00 3.06
882 2441 1.003839 GTGGAAGGGTCGCATGTCA 60.004 57.895 0.00 0.00 0.00 3.58
883 2442 0.605319 GTGGAAGGGTCGCATGTCAA 60.605 55.000 0.00 0.00 0.00 3.18
884 2443 0.327924 TGGAAGGGTCGCATGTCAAT 59.672 50.000 0.00 0.00 0.00 2.57
885 2444 1.017387 GGAAGGGTCGCATGTCAATC 58.983 55.000 0.00 0.00 0.00 2.67
886 2445 1.407437 GGAAGGGTCGCATGTCAATCT 60.407 52.381 0.00 0.00 0.00 2.40
887 2446 2.158957 GGAAGGGTCGCATGTCAATCTA 60.159 50.000 0.00 0.00 0.00 1.98
888 2447 2.898729 AGGGTCGCATGTCAATCTAG 57.101 50.000 0.00 0.00 0.00 2.43
889 2448 1.202580 AGGGTCGCATGTCAATCTAGC 60.203 52.381 0.00 0.00 0.00 3.42
890 2449 1.473257 GGGTCGCATGTCAATCTAGCA 60.473 52.381 0.00 0.00 0.00 3.49
891 2450 1.594862 GGTCGCATGTCAATCTAGCAC 59.405 52.381 0.00 0.00 0.00 4.40
892 2451 1.594862 GTCGCATGTCAATCTAGCACC 59.405 52.381 0.00 0.00 0.00 5.01
893 2452 0.578683 CGCATGTCAATCTAGCACCG 59.421 55.000 0.00 0.00 0.00 4.94
894 2453 0.305922 GCATGTCAATCTAGCACCGC 59.694 55.000 0.00 0.00 0.00 5.68
895 2454 1.655484 CATGTCAATCTAGCACCGCA 58.345 50.000 0.00 0.00 0.00 5.69
896 2455 1.328680 CATGTCAATCTAGCACCGCAC 59.671 52.381 0.00 0.00 0.00 5.34
897 2456 0.320050 TGTCAATCTAGCACCGCACA 59.680 50.000 0.00 0.00 0.00 4.57
898 2457 1.270571 TGTCAATCTAGCACCGCACAA 60.271 47.619 0.00 0.00 0.00 3.33
899 2458 1.804151 GTCAATCTAGCACCGCACAAA 59.196 47.619 0.00 0.00 0.00 2.83
900 2459 1.804151 TCAATCTAGCACCGCACAAAC 59.196 47.619 0.00 0.00 0.00 2.93
901 2460 1.806542 CAATCTAGCACCGCACAAACT 59.193 47.619 0.00 0.00 0.00 2.66
902 2461 2.185004 ATCTAGCACCGCACAAACTT 57.815 45.000 0.00 0.00 0.00 2.66
903 2462 1.508632 TCTAGCACCGCACAAACTTC 58.491 50.000 0.00 0.00 0.00 3.01
904 2463 0.517316 CTAGCACCGCACAAACTTCC 59.483 55.000 0.00 0.00 0.00 3.46
905 2464 0.107831 TAGCACCGCACAAACTTCCT 59.892 50.000 0.00 0.00 0.00 3.36
906 2465 1.166531 AGCACCGCACAAACTTCCTC 61.167 55.000 0.00 0.00 0.00 3.71
907 2466 1.166531 GCACCGCACAAACTTCCTCT 61.167 55.000 0.00 0.00 0.00 3.69
908 2467 1.308998 CACCGCACAAACTTCCTCTT 58.691 50.000 0.00 0.00 0.00 2.85
909 2468 2.489971 CACCGCACAAACTTCCTCTTA 58.510 47.619 0.00 0.00 0.00 2.10
910 2469 2.875933 CACCGCACAAACTTCCTCTTAA 59.124 45.455 0.00 0.00 0.00 1.85
911 2470 3.058914 CACCGCACAAACTTCCTCTTAAG 60.059 47.826 0.00 0.00 0.00 1.85
912 2471 3.139077 CCGCACAAACTTCCTCTTAAGT 58.861 45.455 1.63 0.00 41.46 2.24
913 2472 3.058914 CCGCACAAACTTCCTCTTAAGTG 60.059 47.826 1.63 0.00 39.62 3.16
914 2473 3.058914 CGCACAAACTTCCTCTTAAGTGG 60.059 47.826 16.06 16.06 39.62 4.00
915 2474 3.304726 GCACAAACTTCCTCTTAAGTGGC 60.305 47.826 17.15 0.77 39.62 5.01
916 2475 3.058914 CACAAACTTCCTCTTAAGTGGCG 60.059 47.826 17.15 12.94 39.62 5.69
917 2476 1.809684 AACTTCCTCTTAAGTGGCGC 58.190 50.000 17.15 0.00 39.62 6.53
918 2477 0.036294 ACTTCCTCTTAAGTGGCGCC 60.036 55.000 22.73 22.73 38.28 6.53
919 2478 0.036388 CTTCCTCTTAAGTGGCGCCA 60.036 55.000 29.03 29.03 0.00 5.69
920 2479 0.321298 TTCCTCTTAAGTGGCGCCAC 60.321 55.000 45.27 45.27 46.50 5.01
943 2502 3.085296 GCGCCCCAACCCCTAGTA 61.085 66.667 0.00 0.00 0.00 1.82
944 2503 2.905681 CGCCCCAACCCCTAGTAC 59.094 66.667 0.00 0.00 0.00 2.73
945 2504 1.991167 CGCCCCAACCCCTAGTACA 60.991 63.158 0.00 0.00 0.00 2.90
946 2505 1.342672 CGCCCCAACCCCTAGTACAT 61.343 60.000 0.00 0.00 0.00 2.29
947 2506 1.810455 GCCCCAACCCCTAGTACATA 58.190 55.000 0.00 0.00 0.00 2.29
948 2507 2.129363 GCCCCAACCCCTAGTACATAA 58.871 52.381 0.00 0.00 0.00 1.90
949 2508 2.158711 GCCCCAACCCCTAGTACATAAC 60.159 54.545 0.00 0.00 0.00 1.89
950 2509 2.440627 CCCCAACCCCTAGTACATAACC 59.559 54.545 0.00 0.00 0.00 2.85
951 2510 3.116959 CCCAACCCCTAGTACATAACCA 58.883 50.000 0.00 0.00 0.00 3.67
952 2511 3.524380 CCCAACCCCTAGTACATAACCAA 59.476 47.826 0.00 0.00 0.00 3.67
953 2512 4.384868 CCCAACCCCTAGTACATAACCAAG 60.385 50.000 0.00 0.00 0.00 3.61
954 2513 4.384868 CCAACCCCTAGTACATAACCAAGG 60.385 50.000 0.00 0.00 33.40 3.61
955 2514 2.775960 ACCCCTAGTACATAACCAAGGC 59.224 50.000 0.00 0.00 32.62 4.35
956 2515 2.105993 CCCCTAGTACATAACCAAGGCC 59.894 54.545 0.00 0.00 32.62 5.19
957 2516 2.224209 CCCTAGTACATAACCAAGGCCG 60.224 54.545 0.00 0.00 32.62 6.13
958 2517 2.224209 CCTAGTACATAACCAAGGCCGG 60.224 54.545 0.00 0.00 0.00 6.13
959 2518 0.544697 AGTACATAACCAAGGCCGGG 59.455 55.000 14.26 14.26 0.00 5.73
960 2519 1.099295 GTACATAACCAAGGCCGGGC 61.099 60.000 22.67 22.67 0.00 6.13
961 2520 2.596553 TACATAACCAAGGCCGGGCG 62.597 60.000 23.81 11.36 0.00 6.13
981 2540 3.003173 CGAGCTCTCCACCCCCAA 61.003 66.667 12.85 0.00 0.00 4.12
982 2541 2.993853 GAGCTCTCCACCCCCAAG 59.006 66.667 6.43 0.00 0.00 3.61
983 2542 1.920835 GAGCTCTCCACCCCCAAGT 60.921 63.158 6.43 0.00 0.00 3.16
984 2543 1.904990 GAGCTCTCCACCCCCAAGTC 61.905 65.000 6.43 0.00 0.00 3.01
985 2544 2.224159 GCTCTCCACCCCCAAGTCA 61.224 63.158 0.00 0.00 0.00 3.41
986 2545 1.679898 CTCTCCACCCCCAAGTCAC 59.320 63.158 0.00 0.00 0.00 3.67
987 2546 1.074090 TCTCCACCCCCAAGTCACA 60.074 57.895 0.00 0.00 0.00 3.58
988 2547 0.696143 TCTCCACCCCCAAGTCACAA 60.696 55.000 0.00 0.00 0.00 3.33
989 2548 0.250901 CTCCACCCCCAAGTCACAAG 60.251 60.000 0.00 0.00 0.00 3.16
990 2549 0.991355 TCCACCCCCAAGTCACAAGT 60.991 55.000 0.00 0.00 0.00 3.16
991 2550 0.823356 CCACCCCCAAGTCACAAGTG 60.823 60.000 0.00 0.00 0.00 3.16
992 2551 1.152756 ACCCCCAAGTCACAAGTGC 60.153 57.895 0.00 0.00 0.00 4.40
993 2552 1.903404 CCCCCAAGTCACAAGTGCC 60.903 63.158 0.00 0.00 0.00 5.01
994 2553 1.152777 CCCCAAGTCACAAGTGCCA 60.153 57.895 0.00 0.00 0.00 4.92
995 2554 0.754957 CCCCAAGTCACAAGTGCCAA 60.755 55.000 0.00 0.00 0.00 4.52
996 2555 0.670162 CCCAAGTCACAAGTGCCAAG 59.330 55.000 0.00 0.00 0.00 3.61
997 2556 0.031178 CCAAGTCACAAGTGCCAAGC 59.969 55.000 0.00 0.00 0.00 4.01
998 2557 0.031178 CAAGTCACAAGTGCCAAGCC 59.969 55.000 0.00 0.00 0.00 4.35
999 2558 0.395586 AAGTCACAAGTGCCAAGCCA 60.396 50.000 0.00 0.00 0.00 4.75
1000 2559 0.395586 AGTCACAAGTGCCAAGCCAA 60.396 50.000 0.00 0.00 0.00 4.52
1001 2560 0.249031 GTCACAAGTGCCAAGCCAAC 60.249 55.000 0.00 0.00 0.00 3.77
1002 2561 1.067916 CACAAGTGCCAAGCCAACC 59.932 57.895 0.00 0.00 0.00 3.77
1003 2562 1.381056 ACAAGTGCCAAGCCAACCA 60.381 52.632 0.00 0.00 0.00 3.67
1004 2563 1.364901 CAAGTGCCAAGCCAACCAG 59.635 57.895 0.00 0.00 0.00 4.00
1005 2564 2.501602 AAGTGCCAAGCCAACCAGC 61.502 57.895 0.00 0.00 0.00 4.85
1007 2566 2.598394 TGCCAAGCCAACCAGCTC 60.598 61.111 0.00 0.00 44.11 4.09
1008 2567 2.598394 GCCAAGCCAACCAGCTCA 60.598 61.111 0.00 0.00 44.11 4.26
1009 2568 2.202395 GCCAAGCCAACCAGCTCAA 61.202 57.895 0.00 0.00 44.11 3.02
1010 2569 1.747325 GCCAAGCCAACCAGCTCAAA 61.747 55.000 0.00 0.00 44.11 2.69
1011 2570 0.752054 CCAAGCCAACCAGCTCAAAA 59.248 50.000 0.00 0.00 44.11 2.44
1012 2571 1.138661 CCAAGCCAACCAGCTCAAAAA 59.861 47.619 0.00 0.00 44.11 1.94
1013 2572 2.204237 CAAGCCAACCAGCTCAAAAAC 58.796 47.619 0.00 0.00 44.11 2.43
1014 2573 1.484038 AGCCAACCAGCTCAAAAACA 58.516 45.000 0.00 0.00 39.48 2.83
1015 2574 1.830477 AGCCAACCAGCTCAAAAACAA 59.170 42.857 0.00 0.00 39.48 2.83
1016 2575 1.933181 GCCAACCAGCTCAAAAACAAC 59.067 47.619 0.00 0.00 0.00 3.32
1017 2576 2.418609 GCCAACCAGCTCAAAAACAACT 60.419 45.455 0.00 0.00 0.00 3.16
1018 2577 3.189285 CCAACCAGCTCAAAAACAACTG 58.811 45.455 0.00 0.00 0.00 3.16
1019 2578 3.368323 CCAACCAGCTCAAAAACAACTGT 60.368 43.478 0.00 0.00 0.00 3.55
1020 2579 4.142271 CCAACCAGCTCAAAAACAACTGTA 60.142 41.667 0.00 0.00 0.00 2.74
1021 2580 5.406649 CAACCAGCTCAAAAACAACTGTAA 58.593 37.500 0.00 0.00 0.00 2.41
1022 2581 4.993905 ACCAGCTCAAAAACAACTGTAAC 58.006 39.130 0.00 0.00 0.00 2.50
1023 2582 4.035017 CCAGCTCAAAAACAACTGTAACG 58.965 43.478 0.00 0.00 0.00 3.18
1024 2583 3.482110 CAGCTCAAAAACAACTGTAACGC 59.518 43.478 0.00 0.00 0.00 4.84
1025 2584 2.462565 GCTCAAAAACAACTGTAACGCG 59.537 45.455 3.53 3.53 0.00 6.01
1026 2585 3.786161 GCTCAAAAACAACTGTAACGCGA 60.786 43.478 15.93 0.00 0.00 5.87
1027 2586 3.930618 TCAAAAACAACTGTAACGCGAG 58.069 40.909 15.93 0.84 0.00 5.03
1028 2587 2.378507 AAAACAACTGTAACGCGAGC 57.621 45.000 15.93 2.28 0.00 5.03
1029 2588 1.292061 AAACAACTGTAACGCGAGCA 58.708 45.000 15.93 7.52 0.00 4.26
1030 2589 1.508632 AACAACTGTAACGCGAGCAT 58.491 45.000 15.93 0.00 0.00 3.79
1031 2590 0.790207 ACAACTGTAACGCGAGCATG 59.210 50.000 15.93 5.25 0.00 4.06
1032 2591 0.519175 CAACTGTAACGCGAGCATGC 60.519 55.000 15.93 10.51 0.00 4.06
1080 2639 3.665226 CGATCGCCCTCTCCCTCG 61.665 72.222 0.26 0.00 0.00 4.63
1130 2692 0.179124 CGTCTAGTGAGGAGCTTGCC 60.179 60.000 0.00 0.00 0.00 4.52
1215 2777 2.364842 GCCTCCTCCTGCTCCTCA 60.365 66.667 0.00 0.00 0.00 3.86
1216 2778 2.433994 GCCTCCTCCTGCTCCTCAG 61.434 68.421 0.00 0.00 42.49 3.35
1772 3347 4.681978 GACTGCGCCCGGTGTCTT 62.682 66.667 4.18 0.00 0.00 3.01
1805 3388 2.273449 GCCATGGACTGGGACCTG 59.727 66.667 18.40 0.00 46.06 4.00
1808 3391 0.990282 CCATGGACTGGGACCTGGAT 60.990 60.000 5.56 0.00 41.82 3.41
1811 3394 1.997874 GGACTGGGACCTGGATGCT 60.998 63.158 0.00 0.00 0.00 3.79
1918 3534 3.733960 CGACCAGAGCGACGACCA 61.734 66.667 0.00 0.00 0.00 4.02
1919 3535 2.179517 GACCAGAGCGACGACCAG 59.820 66.667 0.00 0.00 0.00 4.00
1962 3578 5.230942 AGTTCTCGATCTTATTAATGGCCG 58.769 41.667 0.00 0.00 0.00 6.13
1977 3593 1.275291 TGGCCGACGATCTTTCTTTCT 59.725 47.619 0.00 0.00 0.00 2.52
1981 3597 4.320275 GGCCGACGATCTTTCTTTCTTTTT 60.320 41.667 0.00 0.00 0.00 1.94
2025 3685 0.389948 GCACAGTTCTCCGTGTAGGG 60.390 60.000 0.00 0.00 41.52 3.53
2029 3689 1.002087 CAGTTCTCCGTGTAGGGCTTT 59.998 52.381 0.00 0.00 41.52 3.51
2031 3691 1.804748 GTTCTCCGTGTAGGGCTTTTG 59.195 52.381 0.00 0.00 41.52 2.44
2046 3706 3.111098 GCTTTTGGCTTTGATCATAGCG 58.889 45.455 25.54 15.60 36.45 4.26
2080 3740 3.527434 GTAGCCAACTACCGCACTT 57.473 52.632 0.00 0.00 42.60 3.16
2110 3793 2.300152 TGAAGAGAAGACGCAAGGATGT 59.700 45.455 0.00 0.00 46.39 3.06
2193 3886 4.589252 TGTTGTTTAACACGATTGTTCCG 58.411 39.130 0.00 0.00 42.67 4.30
2345 4039 0.037882 TGAGAAGCGAGAACAGGCTG 60.038 55.000 14.16 14.16 39.93 4.85
2411 4124 5.343249 CACCTTTTCCTTTTCTGTTCACTG 58.657 41.667 0.00 0.00 0.00 3.66
2412 4125 5.016831 ACCTTTTCCTTTTCTGTTCACTGT 58.983 37.500 0.00 0.00 0.00 3.55
2426 4139 7.722363 TCTGTTCACTGTTTAATCAGTAGTGA 58.278 34.615 16.81 1.95 45.37 3.41
2427 4140 7.867909 TCTGTTCACTGTTTAATCAGTAGTGAG 59.132 37.037 16.81 11.53 45.70 3.51
2428 4141 7.722363 TGTTCACTGTTTAATCAGTAGTGAGA 58.278 34.615 16.81 8.62 45.70 3.27
2429 4142 8.201464 TGTTCACTGTTTAATCAGTAGTGAGAA 58.799 33.333 16.81 13.07 45.70 2.87
2430 4143 8.488764 GTTCACTGTTTAATCAGTAGTGAGAAC 58.511 37.037 19.98 19.98 45.70 3.01
2431 4144 7.722363 TCACTGTTTAATCAGTAGTGAGAACA 58.278 34.615 16.81 18.32 45.37 3.18
2432 4145 7.867909 TCACTGTTTAATCAGTAGTGAGAACAG 59.132 37.037 29.68 29.68 45.37 3.16
2433 4146 7.727181 ACTGTTTAATCAGTAGTGAGAACAGT 58.273 34.615 30.46 30.46 46.79 3.55
2465 4180 1.045407 GGTCCATCGGTAGGTGCATA 58.955 55.000 0.00 0.00 0.00 3.14
2489 4204 0.035458 ACTGCCTACTCCTGTGTTGC 59.965 55.000 0.00 0.00 0.00 4.17
2499 4214 2.731976 CTCCTGTGTTGCTTTCGTCTAC 59.268 50.000 0.00 0.00 0.00 2.59
2511 4228 7.170393 TGCTTTCGTCTACCTATATATGCAT 57.830 36.000 3.79 3.79 0.00 3.96
2512 4229 7.035612 TGCTTTCGTCTACCTATATATGCATG 58.964 38.462 10.16 0.00 0.00 4.06
2530 4247 7.843490 ATGCATGTGTCGTACTAAGTTTTAT 57.157 32.000 0.00 0.00 0.00 1.40
2532 4249 7.735500 TGCATGTGTCGTACTAAGTTTTATTC 58.264 34.615 0.00 0.00 0.00 1.75
2591 4308 2.586425 CACCCCAGTTTGATCAAGTGT 58.414 47.619 8.41 0.00 34.32 3.55
2592 4309 2.958355 CACCCCAGTTTGATCAAGTGTT 59.042 45.455 8.41 0.00 34.32 3.32
2599 4316 6.438763 CCAGTTTGATCAAGTGTTAACTTCC 58.561 40.000 8.41 0.00 45.07 3.46
2621 4338 5.598005 TCCCATTTTTGAGTTGATGAAGTGT 59.402 36.000 0.00 0.00 0.00 3.55
2676 4393 8.405531 CCTTTTGACATTTGTCTCAAGTCTTTA 58.594 33.333 11.67 0.00 44.99 1.85
2685 4402 5.240891 TGTCTCAAGTCTTTAGGAATGCTG 58.759 41.667 0.00 0.00 0.00 4.41
2686 4403 5.012046 TGTCTCAAGTCTTTAGGAATGCTGA 59.988 40.000 0.00 0.00 0.00 4.26
2690 4407 4.917906 AGTCTTTAGGAATGCTGAAGGT 57.082 40.909 6.46 0.00 0.00 3.50
2693 4410 6.071320 AGTCTTTAGGAATGCTGAAGGTTTT 58.929 36.000 6.46 0.00 0.00 2.43
2718 4435 0.548031 TGGCATGAATCCCCACTCTC 59.452 55.000 0.00 0.00 0.00 3.20
2755 4472 9.328845 CAAAGCCCATGTTAATAATATGCTTTT 57.671 29.630 13.40 7.43 27.98 2.27
2756 4473 8.891671 AAGCCCATGTTAATAATATGCTTTTG 57.108 30.769 4.48 0.00 0.00 2.44
2757 4474 8.248904 AGCCCATGTTAATAATATGCTTTTGA 57.751 30.769 4.48 0.00 0.00 2.69
2758 4475 8.362639 AGCCCATGTTAATAATATGCTTTTGAG 58.637 33.333 4.48 0.00 0.00 3.02
2759 4476 8.143835 GCCCATGTTAATAATATGCTTTTGAGT 58.856 33.333 4.48 0.00 0.00 3.41
2772 4489 6.554334 TGCTTTTGAGTTATTAGGACACAC 57.446 37.500 0.00 0.00 0.00 3.82
2778 4495 9.653287 TTTTGAGTTATTAGGACACACAGATAG 57.347 33.333 0.00 0.00 0.00 2.08
2780 4497 8.589701 TGAGTTATTAGGACACACAGATAGAA 57.410 34.615 0.00 0.00 0.00 2.10
2781 4498 9.031537 TGAGTTATTAGGACACACAGATAGAAA 57.968 33.333 0.00 0.00 0.00 2.52
2809 4526 7.539712 AGGATGACATTTAAATACACTGTCG 57.460 36.000 12.06 0.00 39.20 4.35
2812 4529 7.903431 GGATGACATTTAAATACACTGTCGTTC 59.097 37.037 12.54 8.57 39.20 3.95
2951 4668 7.916914 TTATCACCAAAACTTAGTTAGAGGC 57.083 36.000 0.00 0.00 0.00 4.70
2960 4677 8.352942 CAAAACTTAGTTAGAGGCAAAGACATT 58.647 33.333 0.00 0.00 0.00 2.71
2963 4680 6.998673 ACTTAGTTAGAGGCAAAGACATTGTT 59.001 34.615 0.00 0.00 41.32 2.83
2964 4681 7.502561 ACTTAGTTAGAGGCAAAGACATTGTTT 59.497 33.333 0.00 0.00 41.32 2.83
2972 4689 4.441792 GCAAAGACATTGTTTTTCACCCT 58.558 39.130 2.53 0.00 41.32 4.34
2984 4701 6.310941 TGTTTTTCACCCTCTTCCATTATCA 58.689 36.000 0.00 0.00 0.00 2.15
3014 4734 4.156739 CAGAGGCAAAGATACCAAGGAAAC 59.843 45.833 0.00 0.00 0.00 2.78
3022 4742 7.427214 CAAAGATACCAAGGAAACCGTAAAAA 58.573 34.615 0.00 0.00 0.00 1.94
3034 4754 2.740447 ACCGTAAAAATCACTCGAAGGC 59.260 45.455 0.00 0.00 0.00 4.35
3041 4761 0.895530 ATCACTCGAAGGCGGAAGAA 59.104 50.000 0.00 0.00 38.28 2.52
3047 4767 4.332819 CACTCGAAGGCGGAAGAAAAATAT 59.667 41.667 0.00 0.00 38.28 1.28
3101 4822 0.034896 GAGGCTCCCACTTCACGAAA 59.965 55.000 2.15 0.00 0.00 3.46
3109 4830 4.141287 TCCCACTTCACGAAATTTGATGT 58.859 39.130 0.00 0.00 32.98 3.06
3115 4836 6.088483 CACTTCACGAAATTTGATGTCATTGG 59.912 38.462 0.00 0.00 30.98 3.16
3116 4837 5.058149 TCACGAAATTTGATGTCATTGGG 57.942 39.130 0.00 0.00 0.00 4.12
3117 4838 4.764308 TCACGAAATTTGATGTCATTGGGA 59.236 37.500 0.00 0.00 0.00 4.37
3123 4844 7.493320 CGAAATTTGATGTCATTGGGATGAAAT 59.507 33.333 0.00 0.00 43.58 2.17
3151 4872 6.369059 AGATGCATGTACACTTTGATAAGC 57.631 37.500 2.46 0.00 34.60 3.09
3152 4873 5.882000 AGATGCATGTACACTTTGATAAGCA 59.118 36.000 2.46 0.00 34.60 3.91
3153 4874 5.295431 TGCATGTACACTTTGATAAGCAC 57.705 39.130 0.00 0.00 34.60 4.40
3154 4875 4.759183 TGCATGTACACTTTGATAAGCACA 59.241 37.500 0.00 0.00 34.60 4.57
3155 4876 5.415389 TGCATGTACACTTTGATAAGCACAT 59.585 36.000 0.00 0.00 34.51 3.21
3156 4877 5.740569 GCATGTACACTTTGATAAGCACATG 59.259 40.000 0.00 15.90 43.51 3.21
3157 4878 6.623549 GCATGTACACTTTGATAAGCACATGT 60.624 38.462 18.60 0.00 43.13 3.21
3158 4879 7.413988 GCATGTACACTTTGATAAGCACATGTA 60.414 37.037 18.60 6.14 43.13 2.29
3159 4880 7.359262 TGTACACTTTGATAAGCACATGTAC 57.641 36.000 0.00 0.00 38.87 2.90
3160 4881 6.931840 TGTACACTTTGATAAGCACATGTACA 59.068 34.615 0.00 9.23 42.10 2.90
3161 4882 6.875948 ACACTTTGATAAGCACATGTACAA 57.124 33.333 0.00 0.00 34.60 2.41
3162 4883 6.902341 ACACTTTGATAAGCACATGTACAAG 58.098 36.000 0.00 0.00 34.60 3.16
3163 4884 5.796935 CACTTTGATAAGCACATGTACAAGC 59.203 40.000 0.00 4.85 34.60 4.01
3164 4885 4.963276 TTGATAAGCACATGTACAAGCC 57.037 40.909 0.00 0.00 0.00 4.35
3165 4886 3.949132 TGATAAGCACATGTACAAGCCA 58.051 40.909 0.00 0.00 0.00 4.75
3166 4887 3.940852 TGATAAGCACATGTACAAGCCAG 59.059 43.478 0.00 0.00 0.00 4.85
3167 4888 0.883833 AAGCACATGTACAAGCCAGC 59.116 50.000 0.00 0.98 0.00 4.85
3168 4889 0.037303 AGCACATGTACAAGCCAGCT 59.963 50.000 0.00 3.52 0.00 4.24
3169 4890 1.278985 AGCACATGTACAAGCCAGCTA 59.721 47.619 0.00 0.00 0.00 3.32
3170 4891 2.092753 AGCACATGTACAAGCCAGCTAT 60.093 45.455 0.00 0.00 0.00 2.97
3171 4892 2.289002 GCACATGTACAAGCCAGCTATC 59.711 50.000 0.00 0.00 0.00 2.08
3172 4893 3.534554 CACATGTACAAGCCAGCTATCA 58.465 45.455 0.00 0.00 0.00 2.15
3173 4894 3.310774 CACATGTACAAGCCAGCTATCAC 59.689 47.826 0.00 0.00 0.00 3.06
3174 4895 3.198635 ACATGTACAAGCCAGCTATCACT 59.801 43.478 0.00 0.00 0.00 3.41
3175 4896 4.405680 ACATGTACAAGCCAGCTATCACTA 59.594 41.667 0.00 0.00 0.00 2.74
3176 4897 5.104941 ACATGTACAAGCCAGCTATCACTAA 60.105 40.000 0.00 0.00 0.00 2.24
3177 4898 5.414789 TGTACAAGCCAGCTATCACTAAA 57.585 39.130 0.00 0.00 0.00 1.85
3178 4899 5.800296 TGTACAAGCCAGCTATCACTAAAA 58.200 37.500 0.00 0.00 0.00 1.52
3179 4900 6.234920 TGTACAAGCCAGCTATCACTAAAAA 58.765 36.000 0.00 0.00 0.00 1.94
3203 4924 7.816945 AATAAAAATTTGCAAGTCATCCTCG 57.183 32.000 0.00 0.00 0.00 4.63
3204 4925 2.927553 AATTTGCAAGTCATCCTCGC 57.072 45.000 0.00 0.00 0.00 5.03
3205 4926 2.119801 ATTTGCAAGTCATCCTCGCT 57.880 45.000 0.00 0.00 0.00 4.93
3206 4927 1.442769 TTTGCAAGTCATCCTCGCTC 58.557 50.000 0.00 0.00 0.00 5.03
3207 4928 0.321346 TTGCAAGTCATCCTCGCTCA 59.679 50.000 0.00 0.00 0.00 4.26
3208 4929 0.321346 TGCAAGTCATCCTCGCTCAA 59.679 50.000 0.00 0.00 0.00 3.02
3209 4930 1.005340 GCAAGTCATCCTCGCTCAAG 58.995 55.000 0.00 0.00 0.00 3.02
3210 4931 1.649664 CAAGTCATCCTCGCTCAAGG 58.350 55.000 0.00 0.00 37.81 3.61
3221 4942 6.834168 TCCTCGCTCAAGGAAAAATTAATT 57.166 33.333 0.00 0.00 42.56 1.40
3222 4943 7.931578 TCCTCGCTCAAGGAAAAATTAATTA 57.068 32.000 0.01 0.00 42.56 1.40
3223 4944 7.758495 TCCTCGCTCAAGGAAAAATTAATTAC 58.242 34.615 0.01 0.00 42.56 1.89
3224 4945 6.972901 CCTCGCTCAAGGAAAAATTAATTACC 59.027 38.462 0.01 6.08 38.87 2.85
3225 4946 7.148069 CCTCGCTCAAGGAAAAATTAATTACCT 60.148 37.037 0.01 8.15 38.87 3.08
3226 4947 7.758495 TCGCTCAAGGAAAAATTAATTACCTC 58.242 34.615 16.46 8.09 30.76 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.300539 TGCAACATGTGTACAGTTATTTGGT 59.699 36.000 0.00 0.00 0.00 3.67
1 2 5.767269 TGCAACATGTGTACAGTTATTTGG 58.233 37.500 0.00 0.00 0.00 3.28
2 3 7.083230 TGATGCAACATGTGTACAGTTATTTG 58.917 34.615 0.00 0.00 0.00 2.32
3 4 7.213216 TGATGCAACATGTGTACAGTTATTT 57.787 32.000 0.00 0.00 0.00 1.40
4 5 6.127925 CCTGATGCAACATGTGTACAGTTATT 60.128 38.462 0.00 0.00 0.00 1.40
5 6 5.355071 CCTGATGCAACATGTGTACAGTTAT 59.645 40.000 0.00 0.00 0.00 1.89
6 7 4.694982 CCTGATGCAACATGTGTACAGTTA 59.305 41.667 0.00 0.00 0.00 2.24
7 8 3.503363 CCTGATGCAACATGTGTACAGTT 59.497 43.478 0.00 0.00 0.00 3.16
8 9 3.076621 CCTGATGCAACATGTGTACAGT 58.923 45.455 0.00 0.00 0.00 3.55
9 10 3.337358 TCCTGATGCAACATGTGTACAG 58.663 45.455 0.00 5.56 0.00 2.74
10 11 3.415457 TCCTGATGCAACATGTGTACA 57.585 42.857 0.00 0.00 0.00 2.90
11 12 3.753272 AGTTCCTGATGCAACATGTGTAC 59.247 43.478 0.00 0.00 0.00 2.90
12 13 4.019792 AGTTCCTGATGCAACATGTGTA 57.980 40.909 0.00 0.00 0.00 2.90
13 14 2.867624 AGTTCCTGATGCAACATGTGT 58.132 42.857 0.00 0.00 0.00 3.72
14 15 3.928727 AAGTTCCTGATGCAACATGTG 57.071 42.857 0.00 0.00 0.00 3.21
15 16 4.942761 AAAAGTTCCTGATGCAACATGT 57.057 36.364 0.00 0.00 0.00 3.21
48 49 9.778741 TCTCAATCTAAACAATCAAGTACAACT 57.221 29.630 0.00 0.00 0.00 3.16
77 78 7.558161 TTCATATTGATGAATTCGAAGCTGT 57.442 32.000 3.35 0.00 45.26 4.40
148 149 0.321021 AGAGTTGCCAGCTGACAGAG 59.679 55.000 17.39 0.00 0.00 3.35
298 310 7.090173 TGTTCCTTTGTTTATTAATCTGCAGC 58.910 34.615 9.47 0.00 0.00 5.25
316 328 6.962182 TCTCTTATCCAATCACATGTTCCTT 58.038 36.000 0.00 0.00 0.00 3.36
410 424 8.423906 AGTAGGATATATGTTGGTAAGTGAGG 57.576 38.462 0.00 0.00 0.00 3.86
424 438 7.402862 GTGGGGCATGTTTAAGTAGGATATAT 58.597 38.462 0.00 0.00 0.00 0.86
425 439 6.240060 GGTGGGGCATGTTTAAGTAGGATATA 60.240 42.308 0.00 0.00 0.00 0.86
426 440 5.457633 GGTGGGGCATGTTTAAGTAGGATAT 60.458 44.000 0.00 0.00 0.00 1.63
427 441 4.141344 GGTGGGGCATGTTTAAGTAGGATA 60.141 45.833 0.00 0.00 0.00 2.59
561 2120 2.550978 ACTAGAACATAAATGCGCGCT 58.449 42.857 33.29 15.25 0.00 5.92
583 2142 6.764560 AGGTCACTAAACGTCTTGTATTTGTT 59.235 34.615 0.00 0.00 0.00 2.83
584 2143 6.285990 AGGTCACTAAACGTCTTGTATTTGT 58.714 36.000 0.00 0.00 0.00 2.83
585 2144 6.780706 AGGTCACTAAACGTCTTGTATTTG 57.219 37.500 0.00 0.00 0.00 2.32
586 2145 8.891671 TTTAGGTCACTAAACGTCTTGTATTT 57.108 30.769 0.00 0.00 42.61 1.40
587 2146 8.891671 TTTTAGGTCACTAAACGTCTTGTATT 57.108 30.769 0.00 0.00 46.01 1.89
588 2147 8.932791 CATTTTAGGTCACTAAACGTCTTGTAT 58.067 33.333 0.00 0.00 46.01 2.29
589 2148 7.927629 ACATTTTAGGTCACTAAACGTCTTGTA 59.072 33.333 0.00 0.00 46.01 2.41
590 2149 6.764560 ACATTTTAGGTCACTAAACGTCTTGT 59.235 34.615 0.00 0.00 46.01 3.16
591 2150 7.186021 ACATTTTAGGTCACTAAACGTCTTG 57.814 36.000 0.00 0.00 46.01 3.02
592 2151 7.797038 AACATTTTAGGTCACTAAACGTCTT 57.203 32.000 0.00 0.00 46.01 3.01
593 2152 7.797038 AAACATTTTAGGTCACTAAACGTCT 57.203 32.000 0.00 0.00 46.01 4.18
594 2153 9.373750 GTAAAACATTTTAGGTCACTAAACGTC 57.626 33.333 0.00 0.00 46.01 4.34
595 2154 8.891720 TGTAAAACATTTTAGGTCACTAAACGT 58.108 29.630 0.00 0.00 46.01 3.99
596 2155 9.887406 ATGTAAAACATTTTAGGTCACTAAACG 57.113 29.630 0.00 0.00 46.01 3.60
634 2193 9.384764 GGGAAGGAATAAGCAATGTATACTATC 57.615 37.037 4.17 0.00 0.00 2.08
635 2194 9.117223 AGGGAAGGAATAAGCAATGTATACTAT 57.883 33.333 4.17 0.00 0.00 2.12
636 2195 8.506196 AGGGAAGGAATAAGCAATGTATACTA 57.494 34.615 4.17 0.00 0.00 1.82
637 2196 7.394144 AGGGAAGGAATAAGCAATGTATACT 57.606 36.000 4.17 0.00 0.00 2.12
638 2197 8.465273 AAAGGGAAGGAATAAGCAATGTATAC 57.535 34.615 0.00 0.00 0.00 1.47
640 2199 9.487442 TTTAAAGGGAAGGAATAAGCAATGTAT 57.513 29.630 0.00 0.00 0.00 2.29
641 2200 8.887264 TTTAAAGGGAAGGAATAAGCAATGTA 57.113 30.769 0.00 0.00 0.00 2.29
642 2201 7.790782 TTTAAAGGGAAGGAATAAGCAATGT 57.209 32.000 0.00 0.00 0.00 2.71
643 2202 9.671279 AAATTTAAAGGGAAGGAATAAGCAATG 57.329 29.630 0.00 0.00 0.00 2.82
644 2203 9.671279 CAAATTTAAAGGGAAGGAATAAGCAAT 57.329 29.630 0.00 0.00 0.00 3.56
645 2204 8.100164 CCAAATTTAAAGGGAAGGAATAAGCAA 58.900 33.333 0.00 0.00 0.00 3.91
646 2205 7.456269 TCCAAATTTAAAGGGAAGGAATAAGCA 59.544 33.333 4.14 0.00 0.00 3.91
647 2206 7.847096 TCCAAATTTAAAGGGAAGGAATAAGC 58.153 34.615 4.14 0.00 0.00 3.09
651 2210 9.560860 AGTAATCCAAATTTAAAGGGAAGGAAT 57.439 29.630 9.33 2.04 32.25 3.01
652 2211 8.966155 AGTAATCCAAATTTAAAGGGAAGGAA 57.034 30.769 9.33 0.00 32.25 3.36
653 2212 8.966155 AAGTAATCCAAATTTAAAGGGAAGGA 57.034 30.769 9.33 5.47 32.25 3.36
665 2224 9.990868 AGTTGAGGGTAATAAGTAATCCAAATT 57.009 29.630 0.00 0.00 0.00 1.82
680 2239 9.762381 ACCAATTAATTCATTAGTTGAGGGTAA 57.238 29.630 13.59 0.00 40.36 2.85
681 2240 9.762381 AACCAATTAATTCATTAGTTGAGGGTA 57.238 29.630 13.59 0.00 40.36 3.69
682 2241 8.664669 AACCAATTAATTCATTAGTTGAGGGT 57.335 30.769 13.59 3.97 40.36 4.34
683 2242 8.748412 TGAACCAATTAATTCATTAGTTGAGGG 58.252 33.333 13.59 3.50 40.36 4.30
684 2243 9.573133 GTGAACCAATTAATTCATTAGTTGAGG 57.427 33.333 13.59 4.03 40.36 3.86
694 2253 9.585099 GCATAATTCAGTGAACCAATTAATTCA 57.415 29.630 7.96 0.51 32.44 2.57
695 2254 9.807649 AGCATAATTCAGTGAACCAATTAATTC 57.192 29.630 7.96 0.00 0.00 2.17
696 2255 9.807649 GAGCATAATTCAGTGAACCAATTAATT 57.192 29.630 7.96 0.00 0.00 1.40
697 2256 9.193806 AGAGCATAATTCAGTGAACCAATTAAT 57.806 29.630 7.96 0.00 0.00 1.40
698 2257 8.579850 AGAGCATAATTCAGTGAACCAATTAA 57.420 30.769 7.96 0.00 0.00 1.40
699 2258 9.330063 CTAGAGCATAATTCAGTGAACCAATTA 57.670 33.333 7.96 3.46 0.00 1.40
700 2259 8.049117 TCTAGAGCATAATTCAGTGAACCAATT 58.951 33.333 7.96 1.05 0.00 2.32
701 2260 7.568349 TCTAGAGCATAATTCAGTGAACCAAT 58.432 34.615 7.96 0.00 0.00 3.16
702 2261 6.946340 TCTAGAGCATAATTCAGTGAACCAA 58.054 36.000 7.96 0.00 0.00 3.67
703 2262 6.544928 TCTAGAGCATAATTCAGTGAACCA 57.455 37.500 7.96 0.00 0.00 3.67
704 2263 9.717942 ATAATCTAGAGCATAATTCAGTGAACC 57.282 33.333 7.96 0.00 0.00 3.62
732 2291 8.611654 TCAGATGCGTTATATGTAGTAGTACA 57.388 34.615 12.74 12.74 43.43 2.90
733 2292 8.176365 CCTCAGATGCGTTATATGTAGTAGTAC 58.824 40.741 0.37 0.37 30.09 2.73
734 2293 7.881751 ACCTCAGATGCGTTATATGTAGTAGTA 59.118 37.037 0.00 0.00 30.09 1.82
735 2294 6.715718 ACCTCAGATGCGTTATATGTAGTAGT 59.284 38.462 0.00 0.00 30.09 2.73
736 2295 7.147143 ACCTCAGATGCGTTATATGTAGTAG 57.853 40.000 0.00 0.00 30.09 2.57
737 2296 6.150641 GGACCTCAGATGCGTTATATGTAGTA 59.849 42.308 0.00 0.00 30.09 1.82
738 2297 5.047943 GGACCTCAGATGCGTTATATGTAGT 60.048 44.000 0.00 0.00 30.09 2.73
739 2298 5.184096 AGGACCTCAGATGCGTTATATGTAG 59.816 44.000 0.00 0.00 30.09 2.74
740 2299 5.077564 AGGACCTCAGATGCGTTATATGTA 58.922 41.667 0.00 0.00 30.09 2.29
741 2300 3.898123 AGGACCTCAGATGCGTTATATGT 59.102 43.478 0.00 0.00 30.09 2.29
742 2301 4.527509 AGGACCTCAGATGCGTTATATG 57.472 45.455 0.00 0.00 0.00 1.78
743 2302 7.956328 TTATAGGACCTCAGATGCGTTATAT 57.044 36.000 0.00 0.00 0.00 0.86
744 2303 7.396339 ACATTATAGGACCTCAGATGCGTTATA 59.604 37.037 0.00 0.00 0.00 0.98
745 2304 6.211584 ACATTATAGGACCTCAGATGCGTTAT 59.788 38.462 0.00 0.00 0.00 1.89
746 2305 5.538813 ACATTATAGGACCTCAGATGCGTTA 59.461 40.000 0.00 0.00 0.00 3.18
747 2306 4.345257 ACATTATAGGACCTCAGATGCGTT 59.655 41.667 0.00 0.00 0.00 4.84
748 2307 3.898123 ACATTATAGGACCTCAGATGCGT 59.102 43.478 0.00 0.00 0.00 5.24
749 2308 4.527509 ACATTATAGGACCTCAGATGCG 57.472 45.455 0.00 0.00 0.00 4.73
750 2309 6.435904 AGAGTACATTATAGGACCTCAGATGC 59.564 42.308 0.00 0.00 0.00 3.91
751 2310 7.093988 CCAGAGTACATTATAGGACCTCAGATG 60.094 44.444 0.00 3.33 0.00 2.90
752 2311 6.951198 CCAGAGTACATTATAGGACCTCAGAT 59.049 42.308 0.00 0.00 0.00 2.90
753 2312 6.307776 CCAGAGTACATTATAGGACCTCAGA 58.692 44.000 0.00 0.00 0.00 3.27
754 2313 5.047660 GCCAGAGTACATTATAGGACCTCAG 60.048 48.000 0.00 0.00 0.00 3.35
755 2314 4.833380 GCCAGAGTACATTATAGGACCTCA 59.167 45.833 0.00 0.00 0.00 3.86
756 2315 5.047660 CAGCCAGAGTACATTATAGGACCTC 60.048 48.000 0.00 0.00 0.00 3.85
757 2316 4.835615 CAGCCAGAGTACATTATAGGACCT 59.164 45.833 0.00 0.00 0.00 3.85
758 2317 4.589374 ACAGCCAGAGTACATTATAGGACC 59.411 45.833 0.00 0.00 0.00 4.46
759 2318 5.793030 ACAGCCAGAGTACATTATAGGAC 57.207 43.478 0.00 0.00 0.00 3.85
760 2319 6.611642 AGAAACAGCCAGAGTACATTATAGGA 59.388 38.462 0.00 0.00 0.00 2.94
761 2320 6.821388 AGAAACAGCCAGAGTACATTATAGG 58.179 40.000 0.00 0.00 0.00 2.57
762 2321 8.723942 AAAGAAACAGCCAGAGTACATTATAG 57.276 34.615 0.00 0.00 0.00 1.31
763 2322 8.318412 TGAAAGAAACAGCCAGAGTACATTATA 58.682 33.333 0.00 0.00 0.00 0.98
764 2323 7.168219 TGAAAGAAACAGCCAGAGTACATTAT 58.832 34.615 0.00 0.00 0.00 1.28
765 2324 6.530120 TGAAAGAAACAGCCAGAGTACATTA 58.470 36.000 0.00 0.00 0.00 1.90
766 2325 5.376625 TGAAAGAAACAGCCAGAGTACATT 58.623 37.500 0.00 0.00 0.00 2.71
767 2326 4.973168 TGAAAGAAACAGCCAGAGTACAT 58.027 39.130 0.00 0.00 0.00 2.29
768 2327 4.415881 TGAAAGAAACAGCCAGAGTACA 57.584 40.909 0.00 0.00 0.00 2.90
769 2328 5.948992 AATGAAAGAAACAGCCAGAGTAC 57.051 39.130 0.00 0.00 0.00 2.73
770 2329 7.394016 TGATAATGAAAGAAACAGCCAGAGTA 58.606 34.615 0.00 0.00 0.00 2.59
771 2330 6.240894 TGATAATGAAAGAAACAGCCAGAGT 58.759 36.000 0.00 0.00 0.00 3.24
772 2331 6.748333 TGATAATGAAAGAAACAGCCAGAG 57.252 37.500 0.00 0.00 0.00 3.35
773 2332 7.707624 ATTGATAATGAAAGAAACAGCCAGA 57.292 32.000 0.00 0.00 0.00 3.86
774 2333 7.816031 ACAATTGATAATGAAAGAAACAGCCAG 59.184 33.333 13.59 0.00 0.00 4.85
775 2334 7.669427 ACAATTGATAATGAAAGAAACAGCCA 58.331 30.769 13.59 0.00 0.00 4.75
776 2335 9.638239 TTACAATTGATAATGAAAGAAACAGCC 57.362 29.630 13.59 0.00 0.00 4.85
793 2352 9.638239 GGAACTTGCAATAGAATTTACAATTGA 57.362 29.630 13.59 0.00 32.29 2.57
794 2353 9.643693 AGGAACTTGCAATAGAATTTACAATTG 57.356 29.630 3.24 3.24 27.25 2.32
815 2374 7.460751 GAACATGTTCGTATAGGTAAGGAAC 57.539 40.000 22.09 0.00 37.94 3.62
830 2389 4.722194 TCTAATTGCTTGCGAACATGTTC 58.278 39.130 25.68 25.68 36.29 3.18
831 2390 4.764679 TCTAATTGCTTGCGAACATGTT 57.235 36.364 11.78 11.78 0.00 2.71
832 2391 4.764679 TTCTAATTGCTTGCGAACATGT 57.235 36.364 0.00 0.00 0.00 3.21
833 2392 6.450845 TTTTTCTAATTGCTTGCGAACATG 57.549 33.333 0.00 0.00 0.00 3.21
856 2415 1.627864 CGACCCTTCCACCCATTTTT 58.372 50.000 0.00 0.00 0.00 1.94
857 2416 0.898326 GCGACCCTTCCACCCATTTT 60.898 55.000 0.00 0.00 0.00 1.82
858 2417 1.304134 GCGACCCTTCCACCCATTT 60.304 57.895 0.00 0.00 0.00 2.32
859 2418 1.863155 ATGCGACCCTTCCACCCATT 61.863 55.000 0.00 0.00 0.00 3.16
860 2419 2.308722 ATGCGACCCTTCCACCCAT 61.309 57.895 0.00 0.00 0.00 4.00
861 2420 2.933287 ATGCGACCCTTCCACCCA 60.933 61.111 0.00 0.00 0.00 4.51
862 2421 2.438434 CATGCGACCCTTCCACCC 60.438 66.667 0.00 0.00 0.00 4.61
863 2422 1.745489 GACATGCGACCCTTCCACC 60.745 63.158 0.00 0.00 0.00 4.61
864 2423 0.605319 TTGACATGCGACCCTTCCAC 60.605 55.000 0.00 0.00 0.00 4.02
865 2424 0.327924 ATTGACATGCGACCCTTCCA 59.672 50.000 0.00 0.00 0.00 3.53
866 2425 1.017387 GATTGACATGCGACCCTTCC 58.983 55.000 0.00 0.00 0.00 3.46
867 2426 2.029838 AGATTGACATGCGACCCTTC 57.970 50.000 0.00 0.00 0.00 3.46
868 2427 2.743183 GCTAGATTGACATGCGACCCTT 60.743 50.000 0.00 0.00 0.00 3.95
869 2428 1.202580 GCTAGATTGACATGCGACCCT 60.203 52.381 0.00 0.00 0.00 4.34
870 2429 1.221414 GCTAGATTGACATGCGACCC 58.779 55.000 0.00 0.00 0.00 4.46
871 2430 1.594862 GTGCTAGATTGACATGCGACC 59.405 52.381 0.00 0.00 0.00 4.79
872 2431 1.594862 GGTGCTAGATTGACATGCGAC 59.405 52.381 0.00 0.00 0.00 5.19
873 2432 1.802508 CGGTGCTAGATTGACATGCGA 60.803 52.381 0.00 0.00 0.00 5.10
874 2433 0.578683 CGGTGCTAGATTGACATGCG 59.421 55.000 0.00 0.00 0.00 4.73
875 2434 0.305922 GCGGTGCTAGATTGACATGC 59.694 55.000 0.00 0.00 0.00 4.06
876 2435 1.328680 GTGCGGTGCTAGATTGACATG 59.671 52.381 0.00 0.00 0.00 3.21
877 2436 1.066215 TGTGCGGTGCTAGATTGACAT 60.066 47.619 0.00 0.00 0.00 3.06
878 2437 0.320050 TGTGCGGTGCTAGATTGACA 59.680 50.000 0.00 0.00 0.00 3.58
879 2438 1.438651 TTGTGCGGTGCTAGATTGAC 58.561 50.000 0.00 0.00 0.00 3.18
880 2439 1.804151 GTTTGTGCGGTGCTAGATTGA 59.196 47.619 0.00 0.00 0.00 2.57
881 2440 1.806542 AGTTTGTGCGGTGCTAGATTG 59.193 47.619 0.00 0.00 0.00 2.67
882 2441 2.185004 AGTTTGTGCGGTGCTAGATT 57.815 45.000 0.00 0.00 0.00 2.40
883 2442 2.076863 GAAGTTTGTGCGGTGCTAGAT 58.923 47.619 0.00 0.00 0.00 1.98
884 2443 1.508632 GAAGTTTGTGCGGTGCTAGA 58.491 50.000 0.00 0.00 0.00 2.43
885 2444 0.517316 GGAAGTTTGTGCGGTGCTAG 59.483 55.000 0.00 0.00 0.00 3.42
886 2445 0.107831 AGGAAGTTTGTGCGGTGCTA 59.892 50.000 0.00 0.00 0.00 3.49
887 2446 1.152963 AGGAAGTTTGTGCGGTGCT 60.153 52.632 0.00 0.00 0.00 4.40
888 2447 1.166531 AGAGGAAGTTTGTGCGGTGC 61.167 55.000 0.00 0.00 0.00 5.01
889 2448 1.308998 AAGAGGAAGTTTGTGCGGTG 58.691 50.000 0.00 0.00 0.00 4.94
890 2449 2.922740 TAAGAGGAAGTTTGTGCGGT 57.077 45.000 0.00 0.00 0.00 5.68
891 2450 3.058914 CACTTAAGAGGAAGTTTGTGCGG 60.059 47.826 10.09 0.00 37.57 5.69
892 2451 3.058914 CCACTTAAGAGGAAGTTTGTGCG 60.059 47.826 13.24 0.00 37.57 5.34
893 2452 3.304726 GCCACTTAAGAGGAAGTTTGTGC 60.305 47.826 21.66 0.32 37.57 4.57
894 2453 3.058914 CGCCACTTAAGAGGAAGTTTGTG 60.059 47.826 21.66 0.54 37.57 3.33
895 2454 3.139077 CGCCACTTAAGAGGAAGTTTGT 58.861 45.455 21.66 0.00 37.57 2.83
896 2455 2.095718 GCGCCACTTAAGAGGAAGTTTG 60.096 50.000 21.66 1.09 37.57 2.93
897 2456 2.152016 GCGCCACTTAAGAGGAAGTTT 58.848 47.619 21.66 0.00 37.57 2.66
898 2457 1.610886 GGCGCCACTTAAGAGGAAGTT 60.611 52.381 24.80 0.00 37.57 2.66
899 2458 0.036294 GGCGCCACTTAAGAGGAAGT 60.036 55.000 24.80 0.00 40.35 3.01
900 2459 0.036388 TGGCGCCACTTAAGAGGAAG 60.036 55.000 29.03 14.80 0.00 3.46
901 2460 0.321298 GTGGCGCCACTTAAGAGGAA 60.321 55.000 44.62 11.72 43.12 3.36
902 2461 1.295423 GTGGCGCCACTTAAGAGGA 59.705 57.895 44.62 12.31 43.12 3.71
903 2462 3.890674 GTGGCGCCACTTAAGAGG 58.109 61.111 44.62 14.10 43.12 3.69
918 2477 3.977244 GTTGGGGCGCCAACTGTG 61.977 66.667 42.56 0.00 44.48 3.66
926 2485 3.085296 TACTAGGGGTTGGGGCGC 61.085 66.667 0.00 0.00 0.00 6.53
927 2486 1.342672 ATGTACTAGGGGTTGGGGCG 61.343 60.000 0.00 0.00 0.00 6.13
928 2487 1.810455 TATGTACTAGGGGTTGGGGC 58.190 55.000 0.00 0.00 0.00 5.80
929 2488 2.440627 GGTTATGTACTAGGGGTTGGGG 59.559 54.545 0.00 0.00 0.00 4.96
930 2489 3.116959 TGGTTATGTACTAGGGGTTGGG 58.883 50.000 0.00 0.00 0.00 4.12
931 2490 4.384868 CCTTGGTTATGTACTAGGGGTTGG 60.385 50.000 0.00 0.00 31.71 3.77
932 2491 4.777463 CCTTGGTTATGTACTAGGGGTTG 58.223 47.826 0.00 0.00 31.71 3.77
933 2492 3.201487 GCCTTGGTTATGTACTAGGGGTT 59.799 47.826 0.00 0.00 35.34 4.11
934 2493 2.775960 GCCTTGGTTATGTACTAGGGGT 59.224 50.000 0.00 0.00 35.34 4.95
935 2494 2.105993 GGCCTTGGTTATGTACTAGGGG 59.894 54.545 0.00 0.00 35.34 4.79
936 2495 2.224209 CGGCCTTGGTTATGTACTAGGG 60.224 54.545 0.00 0.00 37.51 3.53
937 2496 2.224209 CCGGCCTTGGTTATGTACTAGG 60.224 54.545 0.00 0.00 34.01 3.02
938 2497 2.224209 CCCGGCCTTGGTTATGTACTAG 60.224 54.545 0.00 0.00 0.00 2.57
939 2498 1.764134 CCCGGCCTTGGTTATGTACTA 59.236 52.381 0.00 0.00 0.00 1.82
940 2499 0.544697 CCCGGCCTTGGTTATGTACT 59.455 55.000 0.00 0.00 0.00 2.73
941 2500 1.099295 GCCCGGCCTTGGTTATGTAC 61.099 60.000 0.00 0.00 0.00 2.90
942 2501 1.225148 GCCCGGCCTTGGTTATGTA 59.775 57.895 0.00 0.00 0.00 2.29
943 2502 2.044352 GCCCGGCCTTGGTTATGT 60.044 61.111 0.00 0.00 0.00 2.29
944 2503 3.209097 CGCCCGGCCTTGGTTATG 61.209 66.667 3.10 0.00 0.00 1.90
964 2523 3.003173 TTGGGGGTGGAGAGCTCG 61.003 66.667 8.37 0.00 0.00 5.03
965 2524 1.904990 GACTTGGGGGTGGAGAGCTC 61.905 65.000 5.27 5.27 0.00 4.09
966 2525 1.920835 GACTTGGGGGTGGAGAGCT 60.921 63.158 0.00 0.00 0.00 4.09
967 2526 2.224159 TGACTTGGGGGTGGAGAGC 61.224 63.158 0.00 0.00 0.00 4.09
968 2527 1.127567 TGTGACTTGGGGGTGGAGAG 61.128 60.000 0.00 0.00 0.00 3.20
969 2528 0.696143 TTGTGACTTGGGGGTGGAGA 60.696 55.000 0.00 0.00 0.00 3.71
970 2529 0.250901 CTTGTGACTTGGGGGTGGAG 60.251 60.000 0.00 0.00 0.00 3.86
971 2530 0.991355 ACTTGTGACTTGGGGGTGGA 60.991 55.000 0.00 0.00 0.00 4.02
972 2531 0.823356 CACTTGTGACTTGGGGGTGG 60.823 60.000 0.00 0.00 0.00 4.61
973 2532 1.455383 GCACTTGTGACTTGGGGGTG 61.455 60.000 4.79 0.00 0.00 4.61
974 2533 1.152756 GCACTTGTGACTTGGGGGT 60.153 57.895 4.79 0.00 0.00 4.95
975 2534 1.903404 GGCACTTGTGACTTGGGGG 60.903 63.158 4.79 0.00 0.00 5.40
976 2535 0.754957 TTGGCACTTGTGACTTGGGG 60.755 55.000 8.17 0.00 0.00 4.96
977 2536 0.670162 CTTGGCACTTGTGACTTGGG 59.330 55.000 8.17 0.00 0.00 4.12
978 2537 0.031178 GCTTGGCACTTGTGACTTGG 59.969 55.000 8.17 0.00 0.00 3.61
979 2538 0.031178 GGCTTGGCACTTGTGACTTG 59.969 55.000 8.17 2.18 0.00 3.16
980 2539 0.395586 TGGCTTGGCACTTGTGACTT 60.396 50.000 8.17 0.00 0.00 3.01
981 2540 0.395586 TTGGCTTGGCACTTGTGACT 60.396 50.000 8.17 0.00 0.00 3.41
982 2541 0.249031 GTTGGCTTGGCACTTGTGAC 60.249 55.000 4.79 1.79 0.00 3.67
983 2542 1.391157 GGTTGGCTTGGCACTTGTGA 61.391 55.000 4.79 0.00 0.00 3.58
984 2543 1.067916 GGTTGGCTTGGCACTTGTG 59.932 57.895 0.00 0.00 0.00 3.33
985 2544 1.381056 TGGTTGGCTTGGCACTTGT 60.381 52.632 0.00 0.00 0.00 3.16
986 2545 1.364901 CTGGTTGGCTTGGCACTTG 59.635 57.895 0.00 0.00 0.00 3.16
987 2546 2.501602 GCTGGTTGGCTTGGCACTT 61.502 57.895 0.00 0.00 0.00 3.16
988 2547 2.914097 GCTGGTTGGCTTGGCACT 60.914 61.111 0.00 0.00 0.00 4.40
989 2548 2.914097 AGCTGGTTGGCTTGGCAC 60.914 61.111 0.00 0.00 39.86 5.01
990 2549 2.598394 GAGCTGGTTGGCTTGGCA 60.598 61.111 0.00 0.00 43.20 4.92
991 2550 1.747325 TTTGAGCTGGTTGGCTTGGC 61.747 55.000 0.00 0.00 43.20 4.52
992 2551 0.752054 TTTTGAGCTGGTTGGCTTGG 59.248 50.000 0.00 0.00 43.20 3.61
993 2552 2.204237 GTTTTTGAGCTGGTTGGCTTG 58.796 47.619 0.00 0.00 43.20 4.01
994 2553 1.830477 TGTTTTTGAGCTGGTTGGCTT 59.170 42.857 0.00 0.00 43.20 4.35
995 2554 1.484038 TGTTTTTGAGCTGGTTGGCT 58.516 45.000 0.00 0.00 46.11 4.75
996 2555 1.933181 GTTGTTTTTGAGCTGGTTGGC 59.067 47.619 0.00 0.00 0.00 4.52
997 2556 3.189285 CAGTTGTTTTTGAGCTGGTTGG 58.811 45.455 0.00 0.00 0.00 3.77
998 2557 3.848726 ACAGTTGTTTTTGAGCTGGTTG 58.151 40.909 0.00 0.00 0.00 3.77
999 2558 5.407502 GTTACAGTTGTTTTTGAGCTGGTT 58.592 37.500 0.00 0.00 0.00 3.67
1000 2559 4.438200 CGTTACAGTTGTTTTTGAGCTGGT 60.438 41.667 0.00 0.00 0.00 4.00
1001 2560 4.035017 CGTTACAGTTGTTTTTGAGCTGG 58.965 43.478 0.00 0.00 0.00 4.85
1002 2561 3.482110 GCGTTACAGTTGTTTTTGAGCTG 59.518 43.478 0.00 0.00 0.00 4.24
1003 2562 3.691498 GCGTTACAGTTGTTTTTGAGCT 58.309 40.909 0.00 0.00 0.00 4.09
1004 2563 2.462565 CGCGTTACAGTTGTTTTTGAGC 59.537 45.455 0.00 0.00 0.00 4.26
1005 2564 3.930618 TCGCGTTACAGTTGTTTTTGAG 58.069 40.909 5.77 0.00 0.00 3.02
1006 2565 3.786161 GCTCGCGTTACAGTTGTTTTTGA 60.786 43.478 5.77 0.00 0.00 2.69
1007 2566 2.462565 GCTCGCGTTACAGTTGTTTTTG 59.537 45.455 5.77 0.00 0.00 2.44
1008 2567 2.096174 TGCTCGCGTTACAGTTGTTTTT 59.904 40.909 5.77 0.00 0.00 1.94
1009 2568 1.666700 TGCTCGCGTTACAGTTGTTTT 59.333 42.857 5.77 0.00 0.00 2.43
1010 2569 1.292061 TGCTCGCGTTACAGTTGTTT 58.708 45.000 5.77 0.00 0.00 2.83
1011 2570 1.194547 CATGCTCGCGTTACAGTTGTT 59.805 47.619 5.77 0.00 0.00 2.83
1012 2571 0.790207 CATGCTCGCGTTACAGTTGT 59.210 50.000 5.77 0.00 0.00 3.32
1013 2572 0.519175 GCATGCTCGCGTTACAGTTG 60.519 55.000 11.37 0.76 0.00 3.16
1014 2573 1.787847 GCATGCTCGCGTTACAGTT 59.212 52.632 11.37 0.00 0.00 3.16
1015 2574 3.474806 GCATGCTCGCGTTACAGT 58.525 55.556 11.37 0.00 0.00 3.55
1025 2584 4.783621 TGCCCCTGTCGCATGCTC 62.784 66.667 17.13 9.37 0.00 4.26
1026 2585 4.790962 CTGCCCCTGTCGCATGCT 62.791 66.667 17.13 0.00 35.25 3.79
1029 2588 3.650298 ATTGCTGCCCCTGTCGCAT 62.650 57.895 0.00 0.00 35.25 4.73
1030 2589 4.349503 ATTGCTGCCCCTGTCGCA 62.350 61.111 0.00 0.00 34.41 5.10
1031 2590 3.512516 GATTGCTGCCCCTGTCGC 61.513 66.667 0.00 0.00 0.00 5.19
1032 2591 1.033746 ATTGATTGCTGCCCCTGTCG 61.034 55.000 0.00 0.00 0.00 4.35
1033 2592 0.458669 CATTGATTGCTGCCCCTGTC 59.541 55.000 0.00 0.00 0.00 3.51
1034 2593 0.974010 CCATTGATTGCTGCCCCTGT 60.974 55.000 0.00 0.00 0.00 4.00
1035 2594 1.820581 CCATTGATTGCTGCCCCTG 59.179 57.895 0.00 0.00 0.00 4.45
1036 2595 2.062177 GCCATTGATTGCTGCCCCT 61.062 57.895 0.00 0.00 0.00 4.79
1037 2596 2.502577 GCCATTGATTGCTGCCCC 59.497 61.111 0.00 0.00 0.00 5.80
1038 2597 2.105528 CGCCATTGATTGCTGCCC 59.894 61.111 0.00 0.00 0.00 5.36
1039 2598 2.567564 AAGCGCCATTGATTGCTGCC 62.568 55.000 2.29 0.00 37.81 4.85
1040 2599 1.153706 AAGCGCCATTGATTGCTGC 60.154 52.632 2.29 0.00 37.81 5.25
1041 2600 2.660944 CAAGCGCCATTGATTGCTG 58.339 52.632 2.29 0.00 37.81 4.41
1105 2667 1.002990 TCCTCACTAGACGTGCCGA 60.003 57.895 0.00 0.00 43.46 5.54
1108 2670 0.528470 AAGCTCCTCACTAGACGTGC 59.472 55.000 0.00 0.00 43.46 5.34
1112 2674 0.179124 CGGCAAGCTCCTCACTAGAC 60.179 60.000 0.00 0.00 0.00 2.59
1114 2676 1.520342 GCGGCAAGCTCCTCACTAG 60.520 63.158 0.00 0.00 44.04 2.57
1130 2692 4.994471 TGGCACTGGAGCACTGCG 62.994 66.667 0.00 0.00 35.83 5.18
1198 2760 2.364842 TGAGGAGCAGGAGGAGGC 60.365 66.667 0.00 0.00 0.00 4.70
1200 2762 2.784356 CGCTGAGGAGCAGGAGGAG 61.784 68.421 0.00 0.00 46.62 3.69
1205 2767 3.429080 GAGAGCGCTGAGGAGCAGG 62.429 68.421 18.48 0.00 46.62 4.85
1207 2769 3.456365 GGAGAGCGCTGAGGAGCA 61.456 66.667 18.48 0.00 46.62 4.26
1208 2770 4.219999 GGGAGAGCGCTGAGGAGC 62.220 72.222 18.48 0.00 42.37 4.70
1302 2864 4.641645 TGAAGGCAGCGTGGTGGG 62.642 66.667 0.82 0.00 0.00 4.61
1642 3211 2.399511 TTTGTGAACCACGCGCATGG 62.400 55.000 23.00 23.00 46.10 3.66
1645 3214 1.226435 GTTTTGTGAACCACGCGCA 60.226 52.632 5.73 0.00 37.14 6.09
1716 3291 4.735132 GCACTGAGCCCGCACGTA 62.735 66.667 0.00 0.00 37.23 3.57
1769 3344 2.989253 TGCGCCGAGTCCTGAAGA 60.989 61.111 4.18 0.00 0.00 2.87
1795 3370 2.976490 GCAGCATCCAGGTCCCAGT 61.976 63.158 0.00 0.00 0.00 4.00
1898 3514 4.103103 TCGTCGCTCTGGTCGCTG 62.103 66.667 0.00 0.00 0.00 5.18
1981 3597 5.630661 TTCGTTTTTGAGTGAAAGGACAA 57.369 34.783 0.00 0.00 32.55 3.18
1982 3598 5.449862 CCATTCGTTTTTGAGTGAAAGGACA 60.450 40.000 0.00 0.00 32.43 4.02
1983 3599 4.976116 CCATTCGTTTTTGAGTGAAAGGAC 59.024 41.667 0.00 0.00 32.43 3.85
1992 3608 3.354089 ACTGTGCCATTCGTTTTTGAG 57.646 42.857 0.00 0.00 0.00 3.02
2025 3685 3.111098 CGCTATGATCAAAGCCAAAAGC 58.889 45.455 0.00 0.00 44.25 3.51
2029 3689 3.609853 AGTTCGCTATGATCAAAGCCAA 58.390 40.909 0.00 0.00 35.22 4.52
2031 3691 3.623060 TGAAGTTCGCTATGATCAAAGCC 59.377 43.478 0.00 0.00 35.22 4.35
2046 3706 8.005007 TAGTTGGCTACTGTCAGAATGAAGTTC 61.005 40.741 11.92 0.00 42.35 3.01
2074 3734 4.717629 TCACCGGCGAGAAGTGCG 62.718 66.667 9.30 0.00 0.00 5.34
2080 3740 0.608308 TCTTCTCTTCACCGGCGAGA 60.608 55.000 9.30 5.23 32.36 4.04
2110 3793 1.636148 AAGAGTACCTGCCGGTGTTA 58.364 50.000 10.50 0.00 45.18 2.41
2135 3828 8.538409 AATATAGCAAAAGCAAAAACTGGAAG 57.462 30.769 0.00 0.00 42.29 3.46
2226 3919 9.865321 TGAGTATGTATGTAAGAAAACTGGTAC 57.135 33.333 0.00 0.00 0.00 3.34
2228 3921 9.383519 CATGAGTATGTATGTAAGAAAACTGGT 57.616 33.333 0.00 0.00 0.00 4.00
2345 4039 3.149436 TCTTATTTTGCGGATTGCTGC 57.851 42.857 0.00 0.00 46.63 5.25
2411 4124 7.438459 ACACACTGTTCTCACTACTGATTAAAC 59.562 37.037 0.00 0.00 0.00 2.01
2412 4125 7.497595 ACACACTGTTCTCACTACTGATTAAA 58.502 34.615 0.00 0.00 0.00 1.52
2426 4139 3.327757 ACCATCCACATACACACTGTTCT 59.672 43.478 0.00 0.00 0.00 3.01
2427 4140 3.674997 ACCATCCACATACACACTGTTC 58.325 45.455 0.00 0.00 0.00 3.18
2428 4141 3.559171 GGACCATCCACATACACACTGTT 60.559 47.826 0.00 0.00 36.28 3.16
2429 4142 2.027192 GGACCATCCACATACACACTGT 60.027 50.000 0.00 0.00 36.28 3.55
2430 4143 2.027285 TGGACCATCCACATACACACTG 60.027 50.000 0.00 0.00 42.67 3.66
2431 4144 2.265367 TGGACCATCCACATACACACT 58.735 47.619 0.00 0.00 42.67 3.55
2432 4145 2.779755 TGGACCATCCACATACACAC 57.220 50.000 0.00 0.00 42.67 3.82
2465 4180 1.944177 ACAGGAGTAGGCAGTCATGT 58.056 50.000 6.34 6.34 42.71 3.21
2489 4204 8.029522 ACACATGCATATATAGGTAGACGAAAG 58.970 37.037 0.00 0.00 0.00 2.62
2499 4214 8.459635 ACTTAGTACGACACATGCATATATAGG 58.540 37.037 0.00 0.00 0.00 2.57
2511 4228 9.624697 ATTACGAATAAAACTTAGTACGACACA 57.375 29.630 0.00 0.00 0.00 3.72
2530 4247 7.731882 TGCCCGATTATTAATCAATTACGAA 57.268 32.000 15.00 0.00 37.78 3.85
2532 4249 6.468956 GCATGCCCGATTATTAATCAATTACG 59.531 38.462 6.36 2.56 37.78 3.18
2591 4308 8.243961 TCATCAACTCAAAAATGGGAAGTTAA 57.756 30.769 0.00 0.00 0.00 2.01
2592 4309 7.831691 TCATCAACTCAAAAATGGGAAGTTA 57.168 32.000 0.00 0.00 0.00 2.24
2599 4316 8.755018 GTTAACACTTCATCAACTCAAAAATGG 58.245 33.333 0.00 0.00 0.00 3.16
2634 4351 6.890814 TGTCAAAAGGTAACCTCTACCAAAAA 59.109 34.615 0.00 0.00 39.99 1.94
2638 4355 5.836024 ATGTCAAAAGGTAACCTCTACCA 57.164 39.130 0.00 0.00 39.99 3.25
2639 4356 6.489022 ACAAATGTCAAAAGGTAACCTCTACC 59.511 38.462 0.00 0.00 37.86 3.18
2693 4410 3.096092 GTGGGGATTCATGCCAAGTAAA 58.904 45.455 0.00 0.00 40.49 2.01
2701 4418 0.533755 CGGAGAGTGGGGATTCATGC 60.534 60.000 0.00 0.00 0.00 4.06
2755 4472 8.589701 TTCTATCTGTGTGTCCTAATAACTCA 57.410 34.615 0.00 0.00 0.00 3.41
2757 4474 9.823647 CATTTCTATCTGTGTGTCCTAATAACT 57.176 33.333 0.00 0.00 0.00 2.24
2758 4475 9.601217 ACATTTCTATCTGTGTGTCCTAATAAC 57.399 33.333 0.00 0.00 0.00 1.89
2765 4482 6.222038 TCCTACATTTCTATCTGTGTGTCC 57.778 41.667 0.00 0.00 0.00 4.02
2781 4498 9.905713 ACAGTGTATTTAAATGTCATCCTACAT 57.094 29.630 11.05 0.00 41.87 2.29
2846 4563 8.336235 TCCCAAGGAAATGAAGTATAAAGATGT 58.664 33.333 0.00 0.00 0.00 3.06
2904 4621 4.991776 TGACACATGATTAGGGGACAAAA 58.008 39.130 0.00 0.00 0.00 2.44
2951 4668 5.906073 AGAGGGTGAAAAACAATGTCTTTG 58.094 37.500 0.00 0.00 41.36 2.77
2960 4677 6.310941 TGATAATGGAAGAGGGTGAAAAACA 58.689 36.000 0.00 0.00 0.00 2.83
2963 4680 6.310941 TGTTGATAATGGAAGAGGGTGAAAA 58.689 36.000 0.00 0.00 0.00 2.29
2964 4681 5.886609 TGTTGATAATGGAAGAGGGTGAAA 58.113 37.500 0.00 0.00 0.00 2.69
2972 4689 5.939883 CCTCTGTGTTGTTGATAATGGAAGA 59.060 40.000 0.00 0.00 0.00 2.87
2984 4701 3.821033 GGTATCTTTGCCTCTGTGTTGTT 59.179 43.478 0.00 0.00 0.00 2.83
3014 4734 2.222729 CGCCTTCGAGTGATTTTTACGG 60.223 50.000 0.00 0.00 38.10 4.02
3022 4742 0.895530 TTCTTCCGCCTTCGAGTGAT 59.104 50.000 0.00 0.00 38.10 3.06
3081 4802 1.827399 TTCGTGAAGTGGGAGCCTCC 61.827 60.000 0.73 0.73 35.23 4.30
3085 4806 2.552315 TCAAATTTCGTGAAGTGGGAGC 59.448 45.455 0.00 0.00 0.00 4.70
3101 4822 9.523168 AAAAATTTCATCCCAATGACATCAAAT 57.477 25.926 0.00 0.00 41.62 2.32
3109 4830 7.849160 TGCATCTAAAAATTTCATCCCAATGA 58.151 30.769 0.00 0.00 40.18 2.57
3115 4836 9.023967 GTGTACATGCATCTAAAAATTTCATCC 57.976 33.333 0.00 0.00 0.00 3.51
3116 4837 9.793252 AGTGTACATGCATCTAAAAATTTCATC 57.207 29.630 0.00 0.00 0.00 2.92
3148 4869 0.883833 GCTGGCTTGTACATGTGCTT 59.116 50.000 15.25 0.00 0.00 3.91
3149 4870 0.037303 AGCTGGCTTGTACATGTGCT 59.963 50.000 15.25 6.37 0.00 4.40
3150 4871 1.737838 TAGCTGGCTTGTACATGTGC 58.262 50.000 9.11 8.01 0.00 4.57
3151 4872 3.310774 GTGATAGCTGGCTTGTACATGTG 59.689 47.826 9.11 0.00 0.00 3.21
3152 4873 3.198635 AGTGATAGCTGGCTTGTACATGT 59.801 43.478 2.69 2.69 0.00 3.21
3153 4874 3.801698 AGTGATAGCTGGCTTGTACATG 58.198 45.455 0.00 0.00 0.00 3.21
3154 4875 5.614324 TTAGTGATAGCTGGCTTGTACAT 57.386 39.130 0.00 0.00 0.00 2.29
3155 4876 5.414789 TTTAGTGATAGCTGGCTTGTACA 57.585 39.130 0.00 0.00 0.00 2.90
3156 4877 6.737254 TTTTTAGTGATAGCTGGCTTGTAC 57.263 37.500 0.00 0.00 0.00 2.90
3177 4898 8.711457 CGAGGATGACTTGCAAATTTTTATTTT 58.289 29.630 0.00 0.00 0.00 1.82
3178 4899 8.243289 CGAGGATGACTTGCAAATTTTTATTT 57.757 30.769 0.00 0.00 0.00 1.40
3179 4900 7.816945 CGAGGATGACTTGCAAATTTTTATT 57.183 32.000 0.00 0.00 0.00 1.40
3191 4912 1.205655 TCCTTGAGCGAGGATGACTTG 59.794 52.381 2.22 0.00 40.87 3.16
3192 4913 1.561643 TCCTTGAGCGAGGATGACTT 58.438 50.000 2.22 0.00 40.87 3.01
3193 4914 1.561643 TTCCTTGAGCGAGGATGACT 58.438 50.000 7.29 0.00 44.98 3.41
3194 4915 2.386661 TTTCCTTGAGCGAGGATGAC 57.613 50.000 7.29 0.00 44.98 3.06
3195 4916 3.417069 TTTTTCCTTGAGCGAGGATGA 57.583 42.857 7.29 0.00 44.98 2.92
3196 4917 4.708726 AATTTTTCCTTGAGCGAGGATG 57.291 40.909 7.29 0.00 44.98 3.51
3197 4918 7.410120 AATTAATTTTTCCTTGAGCGAGGAT 57.590 32.000 7.29 0.00 44.98 3.24
3198 4919 6.834168 AATTAATTTTTCCTTGAGCGAGGA 57.166 33.333 2.22 2.22 43.99 3.71
3199 4920 6.972901 GGTAATTAATTTTTCCTTGAGCGAGG 59.027 38.462 5.91 0.00 38.20 4.63
3200 4921 7.762382 AGGTAATTAATTTTTCCTTGAGCGAG 58.238 34.615 5.91 0.00 0.00 5.03
3201 4922 7.696992 AGGTAATTAATTTTTCCTTGAGCGA 57.303 32.000 5.91 0.00 0.00 4.93
3202 4923 7.971004 GAGGTAATTAATTTTTCCTTGAGCG 57.029 36.000 5.91 0.00 0.00 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.